NO18G00160, NO18G00160 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G00160 vs. NCBI_GenBank
Match: CBN76713.1 (hypothetical protein Esi_0000_0516 [Ectocarpus siliculosus]) HSP 1 Score: 158.7 bits (400), Expect = 5.700e-35 Identity = 151/556 (27.16%), Postives = 235/556 (42.27%), Query Frame = 0
Query: 2 WEANSRLLAVGGFAPSAELRDNNQVSTLLSLWVRSCLEEYNLASGDFVGSVTDHGSDVK-RCCTAGDCLDFKHEWCSPHMFSRAIVEGVEYSEAREDTANENGRKLLMEVRKMITHISKRGRALMKAVFDESQTELFGKSL--KLTNMAMQRWSSTERTLYLALGDWRAILRTYHVRSKRVQLGKKRQELVELYSLFYRVNLLLKDSQGSSVTSGPLLVMRVILLLQNELALDKPLIVIDPAVVEKKDEAVDLEERGAGPVLPRGHTAVRAAALTDVGTKSRRLLRESIIKRFVKSRYHSTGDCGKPSYLVDAAALAHPGLMKMKWVDKMADSKGHATLVESKIEDVIIVMLEELHFNKWLGVGGGEEFEDENISSQPPKRTLPEYRKATTSDIAAMMSDDEDDCQAV----------------ASGPMTSYAWARAKLVEFFDWCGGKGDKVDIAKKMQWKDISSWWLMTGSGMFPELAQIFQALLSMPRGAASLGRDFSIASNVLTVHCAQLDQAFVEMTMLQNMNIDKIPPLSDIRELTVTEAKEVMPRRLRN 539
W SRLLAV F P+ E+ +N ++S +L ++ LEE+ L + +D GSDVK R C + + C HM + ++VE + N RK+++ V+K++ HI + KA+F E Q + + L KL N+A QRWS L + + I Y L E+ ELYSL V L+ Q + V +G V+ + L + +D L V+ P + E ER A V PR H LT VG +R L ++ +R+ Y S ++ D HP +++VDK+ ++ HA V+ I D II + EL + G E +DE+++ KR P + A + +DD AS T ARA+L G + + + + WW G ++P LA+ + + P AA L RDF+ A ++ + D +VEM + + N+D IP I EL + + +P RL N
Sbjct: 102 WRLKSRLLAVRQFNPTLEMFENERLSAVLEKYLTDVLEEFGLDVSMLFSATSDAGSDVKHRLCHT--LIPRLWKSCVCHMLNCSLVEAIGTRVDSRKPGNPAARKVVLAVKKVVEHIRRSKSPGAKAIFQEEQVRHYSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVGIDGVYAREGSVNPLAPHENEIDELYSLIKPVAELIVTCQQTHVPTGQAAVLGLATLKLSTFNVDARLDVLTPVRAQGWPEGTGGGERKATSV-PRLHN-----HLTQVGRDAREHLASALDRRYFDRCYKSADSEKTTDFVFDMQMGLHPTTADLQYVDKLTSTEVHAAFVKKSITDKIIALAVELAEKEMERKQAGPE-QDESVA----KRARPAAAPGSLQTAVAKARNKKDDAATAKFASLGLFKKRRGGGEASQQPTFEPMARAELETLRGVEAG-----TLTDDLSCEGVLEWWKKWGR-LYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIP--EQIPELRDEDVQAKIPGRLSN 636
BLAST of NO18G00160 vs. NCBI_GenBank
Match: CBN79964.1 (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 144.1 bits (362), Expect = 1.500e-30 Identity = 146/555 (26.31%), Postives = 240/555 (43.24%), Query Frame = 0
Query: 1 MWEANSRLLAVGGFAPSAELRDNNQVSTLLSLWVRSCLEEYNLASGDFVGSVTDHGSDVKRCCTAGDCLDFKHEWCSPHMFSRAIVEGVEYSEAREDTANENGRKLLMEVRKMITHISKRGRALMKAVFDESQTELFGK--SLKLTNMAMQRWSSTERTLYLALGDWRAILRTYHVRSKRVQLGKKRQELVELYSLFYRVNLLLKDSQGSSVTSGPLLVMRVILLLQNELALDKPLIVIDPAVVEKKDEAVDLEERGAGPVLPRGHTAVRAAALTDVGTKSRRLLRESIIKRFVKSRYHSTGDCGKPSYLV-DAAALAHPGLMKMKWVDKMADSKGHATLVESKIEDVIIVMLEELHFNKWLGVGGGEEFEDENISSQPPKRTLP-----------EYRKATTSDIAAMMSDDEDDCQAVASGPMTSYAWARAKLVEFFDWCGGKGDKVDIAKKMQWKDISSWWLMTGSGMFPELAQIFQALLSMPRGAASLGRDFSIASNVLTVHCAQLDQAFVEMTMLQNMNIDKIPPLSDIRELT---VTEAKEVMPRRLRN 539
+W+ S LLAV F P+ E N ++S LL +V + LEE+ + + + +D G DVKR C+ L EWC HM S ++ E V + R ++M V+K + + K + K +F E Q F + + K+ N A QRWS L + + AI Y + L E+ ELYSL V ++ Q + +G V+ + L + L D PL ++ PA K + G R H LT VG ++R L ++ R RY ST K + LV D HP +++V ++A ++GHA +V+ I D II + +L +K G E + E + + P+ + P +++ATT+ I A + + ++ P+ ARA+L + D + + + +WW +P LA++ + + + P RD A ++T + D +VEM + + N+D +P + I EL V + +P RL N
Sbjct: 212 VWQLKSYLLAVRQFNPTPETLKNERLSELLEKYVFAVLEEFGIDASLLFSATSDAGGDVKRLCSV--LLPGLREWCVCHMLSDSLAEAVGTCVGPQQPGGRAARNVVMAVKKAVERVRKSPAS--KDIFTEEQVIQFSQCSNRKVVNAAPQRWSGVTGALEATVTNRAAINGVYAEEGEDSPLSPHVHEIDELYSLIQPVAEVIATCQQTHFPTGQAAVLGLAALKLSTLNADAPLDILTPA--SKPTQGATEGAGGEQRTTARAH-----KDLTRVGREAREHLASALHWRDFDKRYKST--VAKSTGLVFDMQMGLHPCTADLQYVSRLAPTEGHAAVVKKNITDKIIALAAKL-ADKKAERKGIEAEQGEPAAKRAPQASAPGNTYPMFASARYHKEATTTAIMAGLGLIATRDEGTSASPIER---ARAEL----ETLRSASDDA-LFGDTSCEGVLNWW-KRKEHSYPLLARVARVVFAAPASVMVQERDLGSAGRMMTSSRSTGDAKYVEMVLFLHGNVDLLPEI--IPELPADGVNGVQTKIPGRLSN 741
BLAST of NO18G00160 vs. NCBI_GenBank
Match: CBJ33761.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 122.9 bits (307), Expect = 3.500e-24 Identity = 91/328 (27.74%), Postives = 154/328 (46.95%), Query Frame = 0
Query: 6 SRLLAVGGFAPSAELRDNNQVSTLLSLWVRSCLEEYNLASGDFVGSVTDHGSDVKRCCTAGDCLDFKHEWCSPHMFSRAIVEGVEYSEAREDTANENGRKLLMEVRKMITHISKRG--RALMKAVFDESQTELFGKSLKLTNMAMQRWSSTERTLYLALGDWRAILRTYHVRSKRVQLGKKRQELVELYSLFYRVNLLLKDSQGSSVTSGPLLVMRVILLLQNELALDKPLIVIDPAVVEKKDEAVDLEERGAGPVLPRGHTAVRAAALTDVGTKSRRLLRESIIKRFVKSRYHSTGDCGKPSYLVDAAALAHPGLMKMKWVDKMADS 332
+ LLA+ GF P Q ++ WVR L ++ + D G+VTD GSDV++ G + EWC PH +RA ++G ++ +E + N R LL ++ ++ H +K + ++ + DE ++ G + KL+ QRW S + L L W A+ + Y K L +++E+ E+Y++ V ++ SQ + ++ + R+++L + L +PL V + +K++ V G HT LT V +R E++ KRFVK RY S G S+ D A P MK++D + S
Sbjct: 179 THLLAIRGFRPPGA-----QTGDVVCKWVRQVLGQHGIRDEDIAGAVTDAGSDVRK----GVSQAWPWEWCLPHALNRATIDGTGMTQVKEKSKNPLCRDLLELIKGIVGHFNKSAADKIALEEIIDE-MSQGKGSTAKLSQAVAQRWISICKMLLRVLERWDALKKIYLDSDKEFPLRSRKKEVEEVYTIINAVKAVVVYSQTTYESTAQGGLQRLVVLATSTLEPMRPLTVTPVRAIGQKEDEVPAASTGP-------HT-----DLTKVAMATREAFAEAVAKRFVKGRYGS--GLGTHSHRFDMAMFLCPSARGMKYIDTLEAS 482
BLAST of NO18G00160 vs. NCBI_GenBank
Match: CBJ27010.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 119.4 bits (298), Expect = 3.900e-23 Identity = 91/328 (27.74%), Postives = 153/328 (46.65%), Query Frame = 0
Query: 6 SRLLAVGGFAPSAELRDNNQVSTLLSLWVRSCLEEYNLASGDFVGSVTDHGSDVKRCCTAGDCLDFKHEWCSPHMFSRAIVEGVEYSEAREDTANENGRKLLMEVRKMITHISKRG--RALMKAVFDESQTELFGKSLKLTNMAMQRWSSTERTLYLALGDWRAILRTYHVRSKRVQLGKKRQELVELYSLFYRVNLLLKDSQGSSVTSGPLLVMRVILLLQNELALDKPLIVIDPAVVEKKDEAVDLEERGAGPVLPRGHTAVRAAALTDVGTKSRRLLRESIIKRFVKSRYHSTGDCGKPSYLVDAAALAHPGLMKMKWVDKMADS 332
+ LLA+ GF P Q ++ WVR L ++ + D G+VTD GSDV++ G + EWC PH +RA ++G ++ +E + N R LL ++ ++ H +K + ++ + DE ++ G + KL+ QRW R L L W A+ + Y K L +++E+ E+Y++ V ++ SQ + ++ + R+++L + L +PL V + +K++ V R HT LT V +R E++ KRFVK RY S G S+ D A P MK++D + S
Sbjct: 179 THLLAIRGFRPPGA-----QTGDVVCKWVRQVLGQHGIRDEDIAGAVTDAGSDVRK----GVSQAWPWEWCLPHALNRATIDGTGMTQVKEKSKNPLCRDLLELIKGIVGHFNKSAADKIALEEIIDE-MSQGKGSTAKLSQAVAQRWIRICRMLLRVLERWDALKKFYLDSDKEFPLRSRKKEVEEVYTIINGVKAVVVYSQITYESTAQGGLQRLVVLATSTLEPMRPLTVTPVRAIGQKEDEVPAAS-------TRPHT-----DLTKVAMATREAFAEAVAKRFVKGRYGS--GLGTHSHRFDMAMFLCPSARGMKYIDTLEAS 482
BLAST of NO18G00160 vs. NCBI_GenBank
Match: CBJ26359.1 (hypothetical protein Esi_0032_0065 [Ectocarpus siliculosus]) HSP 1 Score: 74.3 bits (181), Expect = 1.400e-9 Identity = 68/267 (25.47%), Postives = 120/267 (44.94%), Query Frame = 0
Query: 33 WVRSCLEEYNLASGDFVGSVTDHGSDVKRCCTAGDCLDFKHEWCSPHMFSRAIVEGVEYSEAREDTANENGRKLLMEVRKMITHISKRGRALMKAVFDESQTELFGKSLKLTNMAMQRWSSTERTLYLALGDWRAILRTYHVRSKRVQLGKKRQELVELYSLFYRVNLLLKDSQGSSVTSGPLLVMRVILLLQNELALDKPLIVIDPAVVEKKDEAVDLEERGAGPVLPRGHTAVRAAALTDVGTKSRRLLRESIIKRFVKSRYHST 300
W L+E+ L + F G+V+ G +V T F+ E PH+ +RA ++G S + + N R +L + K+I ++ K +F E +L + KL+ +QRW ST + L L W A+ Y +++ L R E E++S+ + + + Q + + + R+++LL + L ++ L V + A+ E A P R H LT +G K+R + ++ +RF+ RY ST
Sbjct: 83 WNEQVLDEHGLRAESFNGAVSGSGPEVSTGITG----RFRRELSIPHLVNRAAIDGTGMSSSPASSKNAECRAMLKKAEKVIQLFNRSTED--KILFGEDWDDL--HTGKLSQAVVQRWISTCKMLLALLERWEALQEFYTNKNEEFPLATLRTEFEEVHSIMSAASNVAEYCQETYKATAEGGLTRIVVLLTDTLESNETLRV-------QHVPAIGAEVTDAAPHTDRPHD-----CLTAIGMKTRVVFATAVARRFL-CRYGST 328 The following BLAST results are available for this feature:
BLAST of NO18G00160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G00160 ID=NO18G00160|Name=NO18G00160|organism=Nannochloropsis oceanica|type=gene|length=1812bpback to top protein sequence of NO18G00160.1 >NO18G00160.1-protein ID=NO18G00160.1-protein|Name=NO18G00160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=604bpback to top Synonyms
Publications
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