NO17G02860, NO17G02860 (gene) Nannochloropsis oceanica

Overview
NameNO17G02860
Unique NameNO17G02860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2149
Alignment locationchr17:836522..838670 -

Link to JBrowse

Properties
Property NameValue
DescriptionLipase (Class 3)
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:836522..838670 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR002921Fungal_lipase-like
Homology
The following BLAST results are available for this feature:
BLAST of NO17G02860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL159nonsL159Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR053ncniR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|606515gene_9352Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G02860.5NO17G02860.5Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO17G02860.4NO17G02860.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO17G02860.3NO17G02860.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO17G02860.2NO17G02860.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO17G02860.1NO17G02860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G02860.5NO17G02860.5-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO17G02860.4NO17G02860.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO17G02860.3NO17G02860.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO17G02860.2NO17G02860.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO17G02860.1NO17G02860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G02860 ID=NO17G02860|Name=NO17G02860|organism=Nannochloropsis oceanica|type=gene|length=2149bp
CAGTGCCATCCCCTCTTACACAGCCACAGTTCAATGAAGCTCTCATTCGC
CCTTGTTCTCTGCATTTACCTACCTGTGGTACTCCTGGCCTTGCCTGCTC
AAGAATGTCCTCCTGGTTTTGGCACCTCGGGATGGGTCAACGACATGGGG
TTTCTGGCTGATGCGGTCTCGATGGGGGGGCCCGATTTCAAGGACGACTC
CCAAGGTGTGTGTGGGACGTATAAAGTGATCAAGACGTGCGAAGCGCAGg
taaaagaagaagagagggaaagtggaggaggagggacgaagaggacgagg
gataggctacgattctcgtcaccgcctcttcattcctccctctgtcctcc
gcataatagTACCAGACACGGATGCGTATTTACCAATCTAAGGCAGATAG
CAACGTGGTCGTCCTTTCATTTCGTCCGACTCAACAGAATACTGAGgtaa
gaaggcaaaagaaaagagagaggaacaggggagaggaatggatagagcga
agaaggggagggcgagttaaggcatgttgatatcggcgcctgctcttcaa
tttaactgtcggactggtcgatgattgatcctctgctgtacacacaagcc
atcatctcagtcccgccccctccctatgttccccccttcctcctttcttc
cttccgcccaccagGGCCTGGCCATCCACGACAGCCGGCAGATGGTTCCT
TGCAAGTTTCTCCACCGGGGCAACTGCACCGGTCGGGTCCACAGGAGGTT
CCAACGGGCATTCCTGGAGgtaaggagagcaaaggagggtgaacggaaca
ttccacaagctttttgttttgggaggcatgatcgagggaggttgaggggg
agggagctagtgcgtcttcttgtgccagtccccccccgtgtgagagggcc
ttgcactgcacgacatatttgcatcccgggagacttactcaagctcaatc
tcccccccttccaccctccccctctactcctcccaagCTCATGACCAAGT
GCCAAGGCGCAGTGGAGCAGATCAAACACAAGAAGCACATCTTCGTCACA
GGCCACTCCCTGGGAGGAGCATTAGCGCTCTTCTTCACGTTGCATCTGTG
GAGGGACCTAGGGATCTTACCAGCCATGAGCATCGGCTTTGCAGGACCTT
TTATCGGTGATGAGGACTTCACCGACGCCTACCAAGAGCCGCTTAAGCAC
CTCATGGGCGACCAGTGGTGGCAGgcacgtatctgaccctccctccctcc
ctccctccctccctccctccctccctccctccctcctttccttccccctt
cccttccttgcgttcctggcctcggccctgtcatatttccttcctccatt
ttcccatatctttttgttccctctccttcctcttaatcgaccacccttac
agGTAGAGACCGTCAACAAATACAACACCAGCGAATTCGATGGCACTGgt
aagttccccccctccctctctccatccctccatcctattctttcctgatc
aataacgcctctccccctccctcccccttccctgtccacctcttttcccc
tctagTGGAAGAATACAACATGGGCCAGGACGGACCTCAGATCTACATCG
AGCGGGATGCCGTCTGTGGCGTGTATATCAAGCCACTGCCTGTCGATACC
AACCAGACCGCAAGCCCACACTACAGCTACGGTATGCACGACCTCAAAAA
CTACAGGTAGGCGCATGCATGACCATTGTCGCACCCCTCATTTCCTCCCT
CCCTCCCTCCCTCCTTCTCCACCACCCTCTCCACAATTCTCGTTTCTCCG
TCTTCCCTTCCTCCCCATCCACTTTCCTGCCTCTGACCCTGCTATGGTCT
TCCCCTGACTTTCTTCCTACCGCATCCCTGTCCCCTCGCCTCAGACTTCT
CTCCGACCAGGGGAAGGATTGCAGGGCCTTCTGAATAGCAGGAGGAGCAG
GCGGAGCAGGAGGAGCAGGAGCAGGAGTTGCAGTACGCAGTGATAAGTGT
GCGAGCCTCTCTATCTCTCCATTTACACATCTGCATACATGTACATACAT
GCAGATACACACGCACACATGCACAAACAAACACACATAGTATATATACA
TATGTATACACAAACACATATATATATATATGTATATATATACATGTGT
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protein sequence of NO17G02860.5

>NO17G02860.5-protein ID=NO17G02860.5-protein|Name=NO17G02860.5|organism=Nannochloropsis oceanica|type=polypeptide|length=206bp
MRIYQSKADSNVVVLSFRPTQQNTEGLAIHDSRQMVPCKFLHRGNCTGRV
HRRFQRAFLELMTKCQGAVEQIKHKKHIFVTGHSLGGALALFFTLHLWRD
LGILPAMSIGFAGPFIGDEDFTDAYQEPLKHLMGDQWWQVETVNKYNTSE
FDGTVEEYNMGQDGPQIYIERDAVCGVYIKPLPVDTNQTASPHYSYGMHD
LKNYR*
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protein sequence of NO17G02860.4

>NO17G02860.4-protein ID=NO17G02860.4-protein|Name=NO17G02860.4|organism=Nannochloropsis oceanica|type=polypeptide|length=282bp
MKLSFALVLCIYLPVVLLALPAQECPPGFGTSGWVNDMGFLADAVSMGGP
DFKDDSQGVCGTYKVIKTCEAQYQTRMRIYQSKADSNVVVLSFRPTQQNT
EGLAIHDSRQMVPCKFLHRGNCTGRVHRRFQRAFLELMTKCQGAVEQIKH
KKHIFVTGHSLGGALALFFTLHLWRDLGILPAMSIGFAGPFIGDEDFTDA
YQEPLKHLMGDQWWQVETVNKYNTSEFDGTVEEYNMGQDGPQIYIERDAV
CGVYIKPLPVDTNQTASPHYSYGMHDLKNYR*
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protein sequence of NO17G02860.3

>NO17G02860.3-protein ID=NO17G02860.3-protein|Name=NO17G02860.3|organism=Nannochloropsis oceanica|type=polypeptide|length=218bp
MRIYQSKADSNVVVLSFRPTQQNTEGLAIHDSRQMVPCKFLHRGNCTGRV
HRRFQRAFLELMTKCQGAVEQIKHKKHIFVTGHSLGGALALFFTLHLWRD
LGILPAMSIGFAGPFIGDEDFTDAYQEPLKHLMGDQWWQVETVNKYNTSE
FDGTVEEYNMGQDGPQIYIERDAVCGVYIKPLPVDTNQTASPHYSYGMHD
LKNYRLLSDQGKDCRAF*
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protein sequence of NO17G02860.2

>NO17G02860.2-protein ID=NO17G02860.2-protein|Name=NO17G02860.2|organism=Nannochloropsis oceanica|type=polypeptide|length=294bp
MKLSFALVLCIYLPVVLLALPAQECPPGFGTSGWVNDMGFLADAVSMGGP
DFKDDSQGVCGTYKVIKTCEAQYQTRMRIYQSKADSNVVVLSFRPTQQNT
EGLAIHDSRQMVPCKFLHRGNCTGRVHRRFQRAFLELMTKCQGAVEQIKH
KKHIFVTGHSLGGALALFFTLHLWRDLGILPAMSIGFAGPFIGDEDFTDA
YQEPLKHLMGDQWWQVETVNKYNTSEFDGTVEEYNMGQDGPQIYIERDAV
CGVYIKPLPVDTNQTASPHYSYGMHDLKNYRLLSDQGKDCRAF*
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protein sequence of NO17G02860.1

>NO17G02860.1-protein ID=NO17G02860.1-protein|Name=NO17G02860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=206bp
MFPPSSFLPSAHQGLAIHDSRQMVPCKFLHRGNCTGRVHRRFQRAFLELM
TKCQGAVEQIKHKKHIFVTGHSLGGALALFFTLHLWRDLGILPAMSIGFA
GPFIGDEDFTDAYQEPLKHLMGDQWWQVETVNKYNTSEFDGTVEEYNMGQ
DGPQIYIERDAVCGVYIKPLPVDTNQTASPHYSYGMHDLKNYRLLSDQGK
DCRAF*
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Synonyms
Publications