NO17G02840, NO17G02840 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02840 vs. NCBI_GenBank
Match: EWM24117.1 (peptide methionine sulfoxide reductase [Nannochloropsis gaditana]) HSP 1 Score: 317.0 bits (811), Expect = 5.200e-83 Identity = 157/231 (67.97%), Postives = 187/231 (80.95%), Query Frame = 0 Query: 18 LIIFSSSTLSASWTKDLADKAGAFLDSTLQMGQGMSGGGKPFGEAAAQILRNPVGSRAC--KGTGNDIQEVATFAAGCFWSVELSFQRVPGVLSTRVGYIGGHTPNPTYQDVCTGTTGHAEAVEIKFDPSIVSYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSLAQKEQAEASIKEDEKHRLSPIVTQVVPATTFYEAEEYHQQYLQKGGQCARKQDLTPIRCYG 247 L+ + +++SASW +A+KAG FL+++LQMGQGM+ GKPFGE+AA+++ + + K + + QEVA VELSFQRVPGV STRVGY GG P+P+Y++VCTG TGHAEAVEIKFDPSIV+YPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHS QK QAEA+IK+++K R PIVTQ+VPATTFYEAE YHQQYL+KGGQCARK DLTPIRCYG Sbjct: 34 LVHYVIASISASWAGQIAEKAGEFLENSLQMGQGMA-TGKPFGESAAKVVSKVFSTESANVKASCSWGQEVAXXXXXXXXXVELSFQRVPGVASTRVGYTGGSVPHPSYKEVCTGRTGHAEAVEIKFDPSIVTYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSPEQKSQAEAAIKQEQKRRSMPIVTQLVPATTFYEAETYHQQYLEKGGQCARKGDLTPIRCYG 263
BLAST of NO17G02840 vs. NCBI_GenBank
Match: XP_020426718.1 (peptide methionine sulfoxide reductase [Heterostelium album PN500] >EFA74584.1 peptide methionine sulfoxide reductase [Heterostelium album PN500]) HSP 1 Score: 224.2 bits (570), Expect = 4.500e-55 Identity = 105/164 (64.02%), Postives = 126/164 (76.83%), Query Frame = 0 Query: 83 IQEVATFAAGCFWSVELSFQRVPGVLSTRVGYIGGHTPNPTYQDVCTGTTGHAEAVEIKFDPSIVSYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSLAQKEQAEASIKEDEKHRLSPIVTQVVPATTFYEAEEYHQQYLQKGGQCARKQDLTPIRCYG 247 + E ATFAAGCFWSVEL FQR+ GVLSTRVGY G NPTY++VCTGTTGHAEAVE++FDP+ VSY +LL V W +HDPT +RQG D+GTQYRS I+YH+ Q +AE S K+++ PIVT+++PA FY AEEYHQQYLQKGGQC+ K IRCYG Sbjct: 2 VVEKATFAAGCFWSVELVFQRMVGVLSTRVGYTNGVKLNPTYKEVCTGTTGHAEAVELEFDPAQVSYGQLLDVFWKKHDPTTLNRQGGDQGTQYRSGIYYHNDRQHTEAEESKKQEQLKYKQPIVTEILPAGVFYPAEEYHQQYLQKGGQCSSKGCTDKIRCYG 165
BLAST of NO17G02840 vs. NCBI_GenBank
Match: XP_024386958.1 (uncharacterized protein LOC112287788 [Physcomitrella patens]) HSP 1 Score: 223.8 bits (569), Expect = 5.900e-55 Identity = 105/171 (61.40%), Postives = 131/171 (76.61%), Query Frame = 0 Query: 80 GNDIQEVATFAAGCFWSVELSFQRVPGVLSTRVGYIGGHTPNPTYQDVCTGTTGHAEAVEIKFDPSIVSYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSLAQKEQAEASIKEDEKHRLSPIVTQVVPATTFYEAEEYHQQYLQKG----GQCARKQDLTPIRCYG 247 G+++ ++ATFAAGCFWSVEL+FQRVPGV T VGY G T NPTY+DVC+G TGH EAV++++DPS VSY +LL V W +HDPTQK+RQGND G+QYRS I+YH+ QK +A AS+KE+E I T+++PATT+Y AEEYHQQYL+KG Q A K PIRCYG Sbjct: 186 GSEMAQLATFAAGCFWSVELAFQRVPGVTKTSVGYTQGKTENPTYRDVCSGKTGHVEAVQMEYDPSQVSYKQLLDVFWKKHDPTQKNRQGNDVGSQYRSGIYYHTEEQKVEAIASMKEEEARLKKQIATEILPATTYYLAEEYHQQYLEKGVSGRKQSAAKMCNDPIRCYG 356
BLAST of NO17G02840 vs. NCBI_GenBank
Match: OMH80424.1 (Peptide methionine sulfoxide reductase A2-1 [Zancudomyces culisetae]) HSP 1 Score: 221.9 bits (564), Expect = 2.300e-54 Identity = 102/166 (61.45%), Postives = 126/166 (75.90%), Query Frame = 0 Query: 81 NDIQEVATFAAGCFWSVELSFQRVPGVLSTRVGYIGGHTPNPTYQDVCTGTTGHAEAVEIKFDPSIVSYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSLAQKEQAEASIKEDEKHRLSPIVTQVVPATTFYEAEEYHQQYLQKGGQCARKQDLTPIRCYG 247 N + AT AAGCFWSVEL +QR+PGV+ T+VG+ GG T NPTY+ VCTGTT HAEAV +++DP ++SY ++L W +HDPTQ +RQGND GTQYRSAIFYH+ QKE A S +E +K PI+TQ++PAT FY AEEYHQ+YL+KGGQ A K PIRCYG Sbjct: 14 NPKSQWATLAAGCFWSVELYYQRMPGVIQTQVGFTGGKTENPTYKQVCTGTTDHAEAVLLEYDPEVISYSDILKAFWKKHDPTQLNRQGNDIGTQYRSAIFYHTEEQKELATKSKEEHQKSFDFPIMTQILPATVFYPAEEYHQRYLEKGGQKAGKSCSDPIRCYG 179
BLAST of NO17G02840 vs. NCBI_GenBank
Match: PNR46116.1 (hypothetical protein PHYPA_013235 [Physcomitrella patens]) HSP 1 Score: 220.3 bits (560), Expect = 6.600e-54 Identity = 104/166 (62.65%), Postives = 127/166 (76.51%), Query Frame = 0 Query: 85 EVATFAAGCFWSVELSFQRVPGVLSTRVGYIGGHTPNPTYQDVCTGTTGHAEAVEIKFDPSIVSYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSLAQKEQAEASIKEDEKHRLSPIVTQVVPATTFYEAEEYHQQYLQKG----GQCARKQDLTPIRCYG 247 ++ATFAAGCFWSVEL+FQRVPGV T VGY G T NPTY+DVC+G TGH EAV++++DPS VSY +LL V W +HDPTQK+RQGND G+QYRS I+YH+ QK +A AS+KE+E I T+++PATT+Y AEEYHQQYL+KG Q A K PIRCYG Sbjct: 3 QLATFAAGCFWSVELAFQRVPGVTKTSVGYTQGKTENPTYRDVCSGKTGHVEAVQMEYDPSQVSYKQLLDVFWKKHDPTQKNRQGNDVGSQYRSGIYYHTEEQKVEAIASMKEEEARLKKQIATEILPATTYYLAEEYHQQYLEKGVSGRKQSAAKMCNDPIRCYG 168
BLAST of NO17G02840 vs. NCBI_GenBank
Match: CBN74459.1 (Peptide methionine sulfoxide reductase [Ectocarpus siliculosus]) HSP 1 Score: 220.3 bits (560), Expect = 6.600e-54 Identity = 102/164 (62.20%), Postives = 123/164 (75.00%), Query Frame = 0 Query: 83 IQEVATFAAGCFWSVELSFQRVPGVLSTRVGYIGGHTPNPTYQDVCTGTTGHAEAVEIKFDPSIVSYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSLAQKEQAEASIKEDEKHRLSPIVTQVVPATTFYEAEEYHQQYLQKGGQCARKQDLTPIRCYG 247 I E FAAGCFWSVEL++QRVPGVL T VGY GH +PTYQ+VC+G+TGH EA+ +KFDP +V Y ELLTVLWD+ DPT +RQGND GTQYRS I+Y S QKE A AS ++ PIVT++ AT FY AE+YHQ+YL+KGGQC+ K D + IRCYG Sbjct: 29 IVETGIFAAGCFWSVELAYQRVPGVLETEVGYTDGHKKDPTYQEVCSGSTGHTEALRVKFDPRVVKYNELLTVLWDKIDPTTLNRQGNDSGTQYRSGIYYTSAEQKEIALASKAAEQAKLDKPIVTEIKEATEFYRAEDYHQKYLEKGGQCSLKGDTSNIRCYG 192
BLAST of NO17G02840 vs. NCBI_GenBank
Match: OLY77919.1 (Peptide methionine sulfoxide reductase A1 [Smittium mucronatum] >OLY78159.1 Peptide methionine sulfoxide reductase A1 [Smittium mucronatum]) HSP 1 Score: 218.8 bits (556), Expect = 1.900e-53 Identity = 103/162 (63.58%), Postives = 124/162 (76.54%), Query Frame = 0 Query: 85 EVATFAAGCFWSVELSFQRVPGVLSTRVGYIGGHTPNPTYQDVCTGTTGHAEAVEIKFDPSIVSYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSLAQKEQAEASIKEDEKHRLSPIVTQVVPATTFYEAEEYHQQYLQKGGQCARKQDLTPIRCYG 247 + A FAAGCFWSVEL+FQRV GVL +VGY GG T +PTY VC G TGHAE+V ++FDPS+VSY +LL V W +HDPT ++QGND GTQYRS IFYHS QKEQA S+++++K S IVTQ+V A FY AEEYHQ+YL+KGGQCA K + IRCYG Sbjct: 17 QFAEFAAGCFWSVELAFQRVHGVLQAQVGYSGGSTVDPTYNQVCRGNTGHAESVLLEFDPSVVSYNQLLDVFWKKHDPTTPNKQGNDVGTQYRSVIFYHSPEQKEQAIKSMEKEQKKYNSKIVTQIVEAGPFYPAEEYHQKYLEKGGQCAMKGNNDHIRCYG 178
BLAST of NO17G02840 vs. NCBI_GenBank
Match: OMJ11986.1 (Peptide methionine sulfoxide reductase A2-1 [Smittium culicis] >OMJ29202.1 Peptide methionine sulfoxide reductase A2-1 [Smittium culicis]) HSP 1 Score: 218.4 bits (555), Expect = 2.500e-53 Identity = 99/170 (58.24%), Postives = 128/170 (75.29%), Query Frame = 0 Query: 77 KGTGNDIQEVATFAAGCFWSVELSFQRVPGVLSTRVGYIGGHTPNPTYQDVCTGTTGHAEAVEIKFDPSIVSYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSLAQKEQAEASIKEDEKHRLSPIVTQVVPATTFYEAEEYHQQYLQKGGQCARKQDLTPIRCYG 247 K T E A FAAGCFWSVEL FQR+ GVL T+VGY GG PNPTY+ VC+G+TGHAE+V +++DP+++SY +LL W++HDPT ++RQG D GTQYRSAIFYH+ QK+ A S++ ++ S IVTQ+V A+ FY AEEYHQ+YL+KGGQC+ K + IRCYG Sbjct: 9 KSTSVPSSEFAEFAAGCFWSVELMFQRLHGVLQTQVGYSGGSIPNPTYKQVCSGSTGHAESVLLEYDPNVISYSQLLNAFWEKHDPTTENRQGGDIGTQYRSAIFYHTPEQKDAAIKSLETEQSKYQSKIVTQIVQASQFYPAEEYHQKYLEKGGQCSLKGNKDRIRCYG 178
BLAST of NO17G02840 vs. NCBI_GenBank
Match: OMJ12277.1 (Peptide methionine sulfoxide reductase A2-1 [Smittium culicis] >OMJ14380.1 Peptide methionine sulfoxide reductase A2-1 [Smittium culicis]) HSP 1 Score: 218.0 bits (554), Expect = 3.300e-53 Identity = 99/162 (61.11%), Postives = 126/162 (77.78%), Query Frame = 0 Query: 85 EVATFAAGCFWSVELSFQRVPGVLSTRVGYIGGHTPNPTYQDVCTGTTGHAEAVEIKFDPSIVSYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSLAQKEQAEASIKEDEKHRLSPIVTQVVPATTFYEAEEYHQQYLQKGGQCARKQDLTPIRCYG 247 E A FAAGCFWSVEL FQR+ GVL T+VGY GG PNPTY+ VC+G+TGHAE+V +++DP+++SY +LL W++HDPT ++RQG D GTQYRSAIFYHS QK+ A S++ ++ S IVTQ+V A+ FY AEEYHQ+YL+KGGQCA K + IRCYG Sbjct: 17 EFAEFAAGCFWSVELMFQRLHGVLQTQVGYSGGSIPNPTYKQVCSGSTGHAESVLLEYDPAVISYNQLLNAFWEKHDPTTENRQGGDIGTQYRSAIFYHSPEQKDAAIKSLEAEQVKYKSKIVTQIVQASQFYPAEEYHQKYLEKGGQCALKGNKDRIRCYG 178
BLAST of NO17G02840 vs. NCBI_GenBank
Match: XP_012208966.1 (hypothetical protein SPRG_14431 [Saprolegnia parasitica CBS 223.65] >KDO20296.1 hypothetical protein SPRG_14431 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 217.2 bits (552), Expect = 5.600e-53 Identity = 104/161 (64.60%), Postives = 118/161 (73.29%), Query Frame = 0 Query: 86 VATFAAGCFWSVELSFQRVPGVLSTRVGYIGGHTPNPTYQDVCTGTTGHAEAVEIKFDPSIVSYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSLAQKEQAEASIKEDEKHRLSPIVTQVVPATTFYEAEEYHQQYLQKGGQCARKQDLTPIRCYG 247 +ATFAAGCFWSVEL+FQR+PGVL T VGY G NPTY +VCTG TGHAEAV IKFDP++VSY LL W HDPT ++Q ND GTQYRS I+YHS AQK A AS + PIVT+VV A TFY AE+YHQ+YL+KGGQCARK IRCYG Sbjct: 31 IATFAAGCFWSVELNFQRIPGVLETHVGYTNGPKANPTYTEVCTGKTGHAEAVRIKFDPAVVSYDALLDKFWSIHDPTTLNQQKNDVGTQYRSGIYYHSDAQKSLALASKASAQPRFRRPIVTEVVAAETFYVAEDYHQRYLEKGGQCARKGSTDAIRCYG 191 The following BLAST results are available for this feature:
BLAST of NO17G02840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02840 ID=NO17G02840|Name=NO17G02840|organism=Nannochloropsis oceanica|type=gene|length=2825bpback to top protein sequence of NO17G02840.1 >NO17G02840.1-protein ID=NO17G02840.1-protein|Name=NO17G02840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=247bpback to top protein sequence of NO17G02840.2 >NO17G02840.2-protein ID=NO17G02840.2-protein|Name=NO17G02840.2|organism=Nannochloropsis oceanica|type=polypeptide|length=180bpback to top Synonyms
Publications
|