NO17G02760, NO17G02760 (gene) Nannochloropsis oceanica

Overview
NameNO17G02760
Unique NameNO17G02760
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1688
Alignment locationchr17:805589..807276 -

Link to JBrowse

Properties
Property NameValue
DescriptionRING/FYVE/PHD-type zinc finger family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:805589..807276 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR017455Znf_FYVE-rel
IPR007461Ysc84_actin-binding
IPR000306Znf_FYVE
Homology
BLAST of NO17G02760 vs. NCBI_GenBank
Match: CBN74029.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 263.5 bits (672), Expect = 1.200e-66
Identity = 152/346 (43.93%), Postives = 200/346 (57.80%), Query Frame = 0
Query:   17 RRWIHDMEAVSCRGCRAPFTSLARRKHHCRACGRVFCLACTRHKLFIPPADVIRPRKTPAAAVIPL-NLDPYLPQRVCDTCASLLLPLQPALRLTSSKATQALHIDRRSWARYFNHPVQFSLGEEIKKASYTLCNFTGDSALGGRDSIPGELLWGAKGLAFLTVVKAGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPSALGCTGVGYGFSFGVEVTDLLVILSSQEAVNAFSTRAQISLGTELGIALGPLGRTAATDLHYXXXXXXXXXXXXXXXXXGAGFSYGHSRGAFMGVSVEGSVLTARERVNQEFYGMKDVTVGGILSGEIPPPLAAFPLYKALEEV 362
            +RW+ D EA  C  C   F  +  R+HHCR CGRV C ACT +K  +P  DV+ P   P+ A + L + DP   QRVC  C  +L PLQ  L+LT + A    H  R S  RY N PV F L  EI KAS TL NFTGD+ + G DSIP +L+  A+GLAF+T VKAG+                             SAPSALG  G+G+GF  G E+TD++++L++  AV AF+   Q+SLGTEL +++GP+GRTA+TD+                    A FSY HS+G F+GVS+E + +  R+  N++FYG K V+   +L G+ PPP AA PLYKALEEV
Sbjct:    6 KRWVPDEEASRCFLCSCSF-DVTTRRHHCRCCGRVACAACTPNKALVPLNDVVYP---PSDASMSLADFDPREAQRVCRECEHVLAPLQADLQLTMTHAAMPTHHSRASVERYLNSPVTFDLTGEILKASNTLLNFTGDNVIEGADSIPQDLIADARGLAFITFVKAGL---------FVTARVGTGLVVARRPDGGWSAPSALGSFGLGWGFQVGGELTDVVIVLNTMSAVEAFTGTGQVSLGTELSLSVGPVGRTASTDIR------------AGDGGVAAAFSYAHSKGVFIGVSLEAATMVTRKDTNRDFYGTK-VSAQELLLGDFPPPKAAEPLYKALEEV 325          
BLAST of NO17G02760 vs. NCBI_GenBank
Match: XP_009525981.1 (hypothetical protein PHYSODRAFT_544695 [Phytophthora sojae] >EGZ16923.1 hypothetical protein PHYSODRAFT_544695 [Phytophthora sojae])

HSP 1 Score: 235.0 bits (598), Expect = 4.600e-58
Identity = 143/354 (40.40%), Postives = 187/354 (52.82%), Query Frame = 0
Query:    9 PTAPLPPHRRWIHDMEAVSCRGCRAPFTSLARRKHHCRACGRVFCLACTRHKLFIPPADVIRPRKTPAAAVIPLNLDPYLPQRVCDTCASLLLPLQPALRLTSSKATQALHIDRRSWARYFNHPVQFSLGEEIKKASYTLCNFTGDSALGGRDSIPGELLWGAKGLAFLTVVKAGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPSALGCTGVGYGFSFGVEVTDLLVILSSQEAVNAFSTRAQISLGTELGIALGPLGRTAATDLHYXXXXXXXXXXXXXXXXXGAGFSYGHSRGAFMGVSVEGSVLTARERVNQEFYGMKDVTVGGILSGEIPPPLAAFPLYKALEEVM 363
            PT PLP   RWI D E   C GC+  F    RRKHHCR CG VFC  CT  +  I    ++   +    AV     + + PQRVCD C + L P Q  LRLT S A Q   +      R+FN P  F+L EEI+KA+Y++ NFT    +  + SIP  LL  A+G+AFLTV+K G                              SAPSA+G  GVG+G   G E+TD ++IL++Q AV AF    Q++LG ELGI+ GP+GR A+  L                      +SY HS+G + G+S+EGSV+ +R  +N+ FYG K VTV  +L G  PPP+AA PLY A+   M
Sbjct:    8 PTQPLPTTVRWIPDAEVSVCYGCQLLF-DWVRRKHHCRYCGHVFCELCTPQRSLIREDQILTNPERKYLAV-----NAHNPQRVCDDCHARLEPQQEELRLTMSNAVQHTEVKESGPQRFFNSPYSFTLREEIRKATYSVKNFTFQGVVKDQ-SIPLPLLTHARGIAFLTVIKMGF---------VFTGRMGTGLVVARLPDGRWSAPSAIGTAGVGWGPQIGGEITDFVIILNTQRAVEAFCASGQVNLGAELGISAGPVGRVASGALE-----------ASASMDVAPCYSYSHSKGLYAGISLEGSVILSRSDINRSFYG-KAVTVAELLGGVEPPPVAAAPLYDAIRSAM 333          
BLAST of NO17G02760 vs. NCBI_GenBank
Match: ETI45952.1 (hypothetical protein F443_09591 [Phytophthora parasitica P1569])

HSP 1 Score: 230.7 bits (587), Expect = 8.600e-57
Identity = 143/354 (40.40%), Postives = 186/354 (52.54%), Query Frame = 0
Query:    9 PTAPLPPHRRWIHDMEAVSCRGCRAPFTSLARRKHHCRACGRVFCLACTRHKLFIPPADVIRPRKTPAAAVIPLNLDPYLPQRVCDTCASLLLPLQPALRLTSSKATQALHIDRRSWARYFNHPVQFSLGEEIKKASYTLCNFTGDSALGGRDSIPGELLWGAKGLAFLTVVKAGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPSALGCTGVGYGFSFGVEVTDLLVILSSQEAVNAFSTRAQISLGTELGIALGPLGRTAATDLHYXXXXXXXXXXXXXXXXXGAGFSYGHSRGAFMGVSVEGSVLTARERVNQEFYGMKDVTVGGILSGEIPPPLAAFPLYKALEEVM 363
            P A LP   RWI D E   C GC+  F    RRKHHCR CG VFC  CT  +  I    ++   +    AV   N     PQRVCD C + L P Q  LR T S A Q + +      R+FN P  F+L EEI+KA+Y++ NFT    +  + SIP  LL  AKG+AFLTV+K G                              SAPSA+G  GVG+G   G E+TD ++IL++Q AV AF    Q++LG ELGI+ GP+GR A+  L                      +SY HS+G + G+S+EGSV+ +R  +N+ FYG K VTV  +L G  PPP+AA PLY+A+   M
Sbjct:   35 PPAGLPTTVRWIPDAEVSVCYGCQLLF-DWVRRKHHCRYCGHVFCELCTPQRSLIHEDQILTNPERKYLAVNARN-----PQRVCDDCHARLEPEQEELRRTMSHAVQQMEVKESGPQRFFNSPYSFTLREEIRKATYSVKNFTFQGVVKDQ-SIPLPLLTHAKGIAFLTVIKVGF---------VFTGRMGTGLVVARLPDGRWSAPSAIGTAGVGWGPQIGGEITDFVIILNTQRAVEAFCASGQVNLGAELGISAGPVGRVASGALE-----------ASASMDVAPCYSYSHSKGLYAGISLEGSVILSRPDINRSFYG-KAVTVPELLGGVEPPPVAATPLYEAIRAAM 360          
BLAST of NO17G02760 vs. NCBI_GenBank
Match: ETK85951.1 (hypothetical protein L915_09386 [Phytophthora parasitica] >ETL39359.1 hypothetical protein L916_09290 [Phytophthora parasitica] >ETL92510.1 hypothetical protein L917_09223 [Phytophthora parasitica] >ETP15780.1 hypothetical protein F441_09523 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 230.7 bits (587), Expect = 8.600e-57
Identity = 143/354 (40.40%), Postives = 186/354 (52.54%), Query Frame = 0
Query:    9 PTAPLPPHRRWIHDMEAVSCRGCRAPFTSLARRKHHCRACGRVFCLACTRHKLFIPPADVIRPRKTPAAAVIPLNLDPYLPQRVCDTCASLLLPLQPALRLTSSKATQALHIDRRSWARYFNHPVQFSLGEEIKKASYTLCNFTGDSALGGRDSIPGELLWGAKGLAFLTVVKAGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPSALGCTGVGYGFSFGVEVTDLLVILSSQEAVNAFSTRAQISLGTELGIALGPLGRTAATDLHYXXXXXXXXXXXXXXXXXGAGFSYGHSRGAFMGVSVEGSVLTARERVNQEFYGMKDVTVGGILSGEIPPPLAAFPLYKALEEVM 363
            P A LP   RWI D E   C GC+  F    RRKHHCR CG VFC  CT  +  I    ++   +    AV   N     PQRVCD C + L P Q  LR T S A Q + +      R+FN P  F+L EEI+KA+Y++ NFT    +  + SIP  LL  AKG+AFLTV+K G                              SAPSA+G  GVG+G   G E+TD ++IL++Q AV AF    Q++LG ELGI+ GP+GR A+  L                      +SY HS+G + G+S+EGSV+ +R  +N+ FYG K VTV  +L G  PPP+AA PLY+A+   M
Sbjct:   40 PPAGLPTTVRWIPDAEVSVCYGCQLLF-DWVRRKHHCRYCGHVFCELCTPQRSLIHEDQILTNPERKYLAVNARN-----PQRVCDDCHARLEPEQEELRRTMSHAVQQMEVKESGPQRFFNSPYSFTLREEIRKATYSVKNFTFQGVVKDQ-SIPLPLLTHAKGIAFLTVIKVGF---------VFTGRMGTGLVVARLPDGRWSAPSAIGTAGVGWGPQIGGEITDFVIILNTQRAVEAFCASGQVNLGAELGISAGPVGRVASGALE-----------ASASMDVAPCYSYSHSKGLYAGISLEGSVILSRPDINRSFYG-KAVTVPELLGGVEPPPVAATPLYEAIRAAM 365          
BLAST of NO17G02760 vs. NCBI_GenBank
Match: XP_008906505.1 (hypothetical protein PPTG_12058 [Phytophthora parasitica INRA-310] >ETM45781.1 hypothetical protein L914_09247 [Phytophthora parasitica] >ETN08217.1 hypothetical protein PPTG_12058 [Phytophthora parasitica INRA-310] >ETO74647.1 hypothetical protein F444_09653 [Phytophthora parasitica P1976] >ETP43868.1 hypothetical protein F442_09497 [Phytophthora parasitica P10297])

HSP 1 Score: 230.7 bits (587), Expect = 8.600e-57
Identity = 143/354 (40.40%), Postives = 186/354 (52.54%), Query Frame = 0
Query:    9 PTAPLPPHRRWIHDMEAVSCRGCRAPFTSLARRKHHCRACGRVFCLACTRHKLFIPPADVIRPRKTPAAAVIPLNLDPYLPQRVCDTCASLLLPLQPALRLTSSKATQALHIDRRSWARYFNHPVQFSLGEEIKKASYTLCNFTGDSALGGRDSIPGELLWGAKGLAFLTVVKAGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPSALGCTGVGYGFSFGVEVTDLLVILSSQEAVNAFSTRAQISLGTELGIALGPLGRTAATDLHYXXXXXXXXXXXXXXXXXGAGFSYGHSRGAFMGVSVEGSVLTARERVNQEFYGMKDVTVGGILSGEIPPPLAAFPLYKALEEVM 363
            P A LP   RWI D E   C GC+  F    RRKHHCR CG VFC  CT  +  I    ++   +    AV   N     PQRVCD C + L P Q  LR T S A Q + +      R+FN P  F+L EEI+KA+Y++ NFT    +  + SIP  LL  AKG+AFLTV+K G                              SAPSA+G  GVG+G   G E+TD ++IL++Q AV AF    Q++LG ELGI+ GP+GR A+  L                      +SY HS+G + G+S+EGSV+ +R  +N+ FYG K VTV  +L G  PPP+AA PLY+A+   M
Sbjct:    9 PPAGLPTTVRWIPDAEVSVCYGCQLLF-DWVRRKHHCRYCGHVFCELCTPQRSLIHEDQILTNPERKYLAVNARN-----PQRVCDDCHARLEPEQEELRRTMSHAVQQMEVKESGPQRFFNSPYSFTLREEIRKATYSVKNFTFQGVVKDQ-SIPLPLLTHAKGIAFLTVIKVGF---------VFTGRMGTGLVVARLPDGRWSAPSAIGTAGVGWGPQIGGEITDFVIILNTQRAVEAFCASGQVNLGAELGISAGPVGRVASGALE-----------ASASMDVAPCYSYSHSKGLYAGISLEGSVILSRPDINRSFYG-KAVTVPELLGGVEPPPVAATPLYEAIRAAM 334          
BLAST of NO17G02760 vs. NCBI_GenBank
Match: KUF81512.1 (SH3 domain-containing protein [Phytophthora nicotianae])

HSP 1 Score: 230.7 bits (587), Expect = 8.600e-57
Identity = 143/354 (40.40%), Postives = 186/354 (52.54%), Query Frame = 0
Query:    9 PTAPLPPHRRWIHDMEAVSCRGCRAPFTSLARRKHHCRACGRVFCLACTRHKLFIPPADVIRPRKTPAAAVIPLNLDPYLPQRVCDTCASLLLPLQPALRLTSSKATQALHIDRRSWARYFNHPVQFSLGEEIKKASYTLCNFTGDSALGGRDSIPGELLWGAKGLAFLTVVKAGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPSALGCTGVGYGFSFGVEVTDLLVILSSQEAVNAFSTRAQISLGTELGIALGPLGRTAATDLHYXXXXXXXXXXXXXXXXXGAGFSYGHSRGAFMGVSVEGSVLTARERVNQEFYGMKDVTVGGILSGEIPPPLAAFPLYKALEEVM 363
            P A LP   RWI D E   C GC+  F    RRKHHCR CG VFC  CT  +  I    ++   +    AV   N     PQRVCD C + L P Q  LR T S A Q + +      R+FN P  F+L EEI+KA+Y++ NFT    +  + SIP  LL  AKG+AFLTV+K G                              SAPSA+G  GVG+G   G E+TD ++IL++Q AV AF    Q++LG ELGI+ GP+GR A+  L                      +SY HS+G + G+S+EGSV+ +R  +N+ FYG K VTV  +L G  PPP+AA PLY+A+   M
Sbjct:    9 PPAGLPTTVRWIPDAEVSVCYGCQLLF-DWVRRKHHCRYCGHVFCELCTPQRSLIHEDQILTNPERKYLAVNARN-----PQRVCDDCHARLEPEQEELRRTMSHAVQQMEVKESGPQRFFNSPYSFTLREEIRKATYSVKNFTFQGVVKDQ-SIPLPLLTHAKGIAFLTVIKVGF---------VFTGRMGTGLVVARLPDGRWSAPSAIGTAGVGWGPQIGGEITDFVIILNTQRAVEAFCASGQVNLGAELGISAGPVGRVASGALE-----------ASASMDVAPCYSYSHSKGLYAGISLEGSVILSRPDINRSFYG-KAVTVPELLGGVEPPPVAATPLYEAIRAAM 334          
BLAST of NO17G02760 vs. NCBI_GenBank
Match: XP_008867290.1 (hypothetical protein H310_04633 [Aphanomyces invadans] >ETW04334.1 hypothetical protein H310_04633 [Aphanomyces invadans])

HSP 1 Score: 229.9 bits (585), Expect = 1.500e-56
Identity = 141/345 (40.87%), Postives = 189/345 (54.78%), Query Frame = 0
Query:   18 RWIHDMEAVSCRGCRAPFTSLARRKHHCRACGRVFCLACTRHKLFIPPADV-IRPRKTPAAAVIPLNLDPYLPQRVCDTCASLLLPLQPALRLTSSKATQALHIDRRSWARYFNHPVQFSLGEEIKKASYTLCNFTGDSALGGRDSIPGELLWGAKGLAFLTVVKAGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPSALGCTGVGYGFSFGVEVTDLLVILSSQEAVNAFSTRAQISLGTELGIALGPLGRTAATDLHYXXXXXXXXXXXXXXXXXGAGFSYGHSRGAFMGVSVEGSVLTARERVNQEFYGMKDVTVGGILSGEIPPPLAAFPLYKALEEV 362
            RWI D E   C+ C   F    RRKHHCR CG+VFC  CT H+  I    + I P K        L+++ + PQRVC  C  +LLP Q  LR T+S A Q   I+     R+FN P  F+L EE++KA+Y++ NF  +  +  + SIP  LL  A+G+AFLTV+K G                              SAPSA+   G+G+G   G EVTD ++IL+++ AV+ F  + Q++LG ELG+A GP+GR AA  +                      +SY HS+G F+G+S+EGSV+ AR  VN+EFYG KDVT   +L G   PP+AA PLY ALEEV
Sbjct:   36 RWISDAEVSLCKSCGLLF-DWVRRKHHCRYCGQVFCDDCTPHRSLIHEDKILISPNKR------YLSVNAFSPQRVCKPCHHILLPDQAILRETASNAVQPNSINETGSKRFFNSPYSFTLREEVRKAAYSIKNFMLEGVIKDQ-SIPLPLLTNAQGIAFLTVLKVGF---------VVTGRLGTGLVLSKLPDGSWSAPSAIATAGIGWGAQVGGEVTDFVMILNTRAAVDTFCAQGQVNLGAELGVAAGPVGRVAAGAVE------------AGPGGIAPCYSYSHSKGLFIGISLEGSVIMARPDVNREFYG-KDVTAAELLGGRERPPVAAQPLYDALEEV 350          
BLAST of NO17G02760 vs. NCBI_GenBank
Match: XP_008867291.1 (hypothetical protein, variant [Aphanomyces invadans] >ETW04335.1 hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 229.9 bits (585), Expect = 1.500e-56
Identity = 141/345 (40.87%), Postives = 189/345 (54.78%), Query Frame = 0
Query:   18 RWIHDMEAVSCRGCRAPFTSLARRKHHCRACGRVFCLACTRHKLFIPPADV-IRPRKTPAAAVIPLNLDPYLPQRVCDTCASLLLPLQPALRLTSSKATQALHIDRRSWARYFNHPVQFSLGEEIKKASYTLCNFTGDSALGGRDSIPGELLWGAKGLAFLTVVKAGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPSALGCTGVGYGFSFGVEVTDLLVILSSQEAVNAFSTRAQISLGTELGIALGPLGRTAATDLHYXXXXXXXXXXXXXXXXXGAGFSYGHSRGAFMGVSVEGSVLTARERVNQEFYGMKDVTVGGILSGEIPPPLAAFPLYKALEEV 362
            RWI D E   C+ C   F    RRKHHCR CG+VFC  CT H+  I    + I P K        L+++ + PQRVC  C  +LLP Q  LR T+S A Q   I+     R+FN P  F+L EE++KA+Y++ NF  +  +  + SIP  LL  A+G+AFLTV+K G                              SAPSA+   G+G+G   G EVTD ++IL+++ AV+ F  + Q++LG ELG+A GP+GR AA  +                      +SY HS+G F+G+S+EGSV+ AR  VN+EFYG KDVT   +L G   PP+AA PLY ALEEV
Sbjct:   36 RWISDAEVSLCKSCGLLF-DWVRRKHHCRYCGQVFCDDCTPHRSLIHEDKILISPNKR------YLSVNAFSPQRVCKPCHHILLPDQAILRETASNAVQPNSINETGSKRFFNSPYSFTLREEVRKAAYSIKNFMLEGVIKDQ-SIPLPLLTNAQGIAFLTVLKVGF---------VVTGRLGTGLVLSKLPDGSWSAPSAIATAGIGWGAQVGGEVTDFVMILNTRAAVDTFCAQGQVNLGAELGVAAGPVGRVAAGAVE------------AGPGGIAPCYSYSHSKGLFIGISLEGSVIMARPDVNREFYG-KDVTAAELLGGRERPPVAAQPLYDALEEV 350          
BLAST of NO17G02760 vs. NCBI_GenBank
Match: POM68250.1 (Hypothetical protein PHPALM_15616 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 229.9 bits (585), Expect = 1.500e-56
Identity = 145/361 (40.17%), Postives = 189/361 (52.35%), Query Frame = 0
Query:    2 KEQAADIPTAPLPPHRRWIHDMEAVSCRGCRAPFTSLARRKHHCRACGRVFCLACTRHKLFIPPADVIRPRKTPAAAVIPLNLDPYLPQRVCDTCASLLLPLQPALRLTSSKATQALHIDRRSWARYFNHPVQFSLGEEIKKASYTLCNFTGDSALGGRDSIPGELLWGAKGLAFLTVVKAGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPSALGCTGVGYGFSFGVEVTDLLVILSSQEAVNAFSTRAQISLGTELGIALGPLGRTAATDLHYXXXXXXXXXXXXXXXXXGAGFSYGHSRGAFMGVSVEGSVLTARERVNQEFYGMKDVTVGGILSGEIPPPLAAFPLYKALEEVM 363
            KEQ  +  T  LP   RWI D E   C GC+  F    RRKHHCR CG VFC  CT  +  I    ++   +    AV     + + PQRVCD C + L P Q  LRLT S A Q   +      R+FN P  F+L EEI+KA+Y++ NFT    +  + SIP  LL  AKG+AFLTV+K G                              SAPSA+G  GVG+G   G E+TD ++IL++Q AV AF    Q++LG ELGI+ GP+GR A+  L                      +SY HS+G F G+S+EGSV+ +R  +N+ FYG K V V  +L G  PPP+AA PLY+A+   M
Sbjct:    3 KEQ--ETKTTALPTTVRWIPDAEVSVCYGCQLLF-DWVRRKHHCRYCGHVFCELCTPQRSLIRQDQILTNPERKYLAV-----NAHNPQRVCDDCHARLEPEQEELRLTMSHAVQQTEVTDSGPQRFFNSPYSFTLREEIRKATYSVKNFTFQGVVKDQ-SIPLPLLTHAKGIAFLTVIKMGF---------VFTGRMGTGLVVARLPDGRWSAPSAIGTAGVGWGPQIGGEITDFVIILNTQRAVEAFCASGQVNLGAELGISAGPVGRVASGALE-----------ASASMDVAPCYSYSHSKGLFAGISLEGSVILSRPDINRSFYG-KAVAVSDLLGGVEPPPVAAAPLYEAIRAAM 333          
BLAST of NO17G02760 vs. NCBI_GenBank
Match: XP_009828161.1 (hypothetical protein H257_05111 [Aphanomyces astaci] >ETV82492.1 hypothetical protein H257_05111 [Aphanomyces astaci])

HSP 1 Score: 228.8 bits (582), Expect = 3.300e-56
Identity = 139/349 (39.83%), Postives = 190/349 (54.44%), Query Frame = 0
Query:   18 RWIHDMEAVSCRGCRAPFTSLARRKHHCRACGRVFCLACTRHKLFIPPADVI-RPRKTPAAAVIPLNLDPYLPQRVCDTCASLLLPLQPALRLTSSKATQALHIDRRSWARYFNHPVQFSLGEEIKKASYTLCNFTGDSALGGRDSIPGELLWGAKGLAFLTVVKAGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPSALGCTGVGYGFSFGVEVTDLLVILSSQEAVNAFSTRAQISLGTELGIALGPLGRTAATDLHYXXXXXXXXXXXXXXXXXGAG----FSYGHSRGAFMGVSVEGSVLTARERVNQEFYGMKDVTVGGILSGEIPPPLAAFPLYKALEEV 362
            RWI D E   C+ C   F    RRKHHCR CG++FC  CTRH+  I    ++  P K        L+++ + PQRVC+ C  +LLP Q  LR T+S A Q   I+     R+ N P  F+L EE++KA+Y++ NF  D  +  + SIP  LL  A+G+AFLTV+K G                              SAPSA+   G+G+G   G EVTD ++IL+++ AV+ F  + Q++LG ELG+A GP+GR AA  +                     G    +SY HS+G F+G+S+EGSV+ AR  VN+EFYG KD+T   +L G   PP+AA PLY ALE V
Sbjct:   35 RWISDGEVSLCKSCGLLF-DWVRRKHHCRYCGQLFCDDCTRHRSMIREDKILTSPNKK------YLSVNAFNPQRVCEPCHHILLPDQAILRETASNAVQPNSINEAGSKRFLNSPYSFTLREEVRKAAYSIKNFMLDGVIKDQ-SIPLPLLTNAQGIAFLTVLKVGF---------VVTGRLGTGLVLSKLPDGSWSAPSAIATAGIGWGAQIGGEVTDFVIILNTRGAVDTFCAQGQVNLGAELGVAAGPVGRVAAGAVEAGQMNMSYISNGNVLFVGPGGVAPCYSYSHSKGLFIGISLEGSVVMARPDVNREFYG-KDITAAELLGGRERPPVAAQPLYDALEAV 365          
The following BLAST results are available for this feature:
BLAST of NO17G02760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN74029.11.200e-6643.93conserved unknown protein [Ectocarpus siliculosus][more]
XP_009525981.14.600e-5840.40hypothetical protein PHYSODRAFT_544695 [Phytophtho... [more]
ETI45952.18.600e-5740.40hypothetical protein F443_09591 [Phytophthora para... [more]
ETK85951.18.600e-5740.40hypothetical protein L915_09386 [Phytophthora para... [more]
XP_008906505.18.600e-5740.40hypothetical protein PPTG_12058 [Phytophthora para... [more]
KUF81512.18.600e-5740.40SH3 domain-containing protein [Phytophthora nicoti... [more]
XP_008867290.11.500e-5640.87hypothetical protein H310_04633 [Aphanomyces invad... [more]
XP_008867291.11.500e-5640.87hypothetical protein, variant [Aphanomyces invadan... [more]
POM68250.11.500e-5640.17Hypothetical protein PHPALM_15616 [Phytophthora pa... [more]
XP_009828161.13.300e-5639.83hypothetical protein H257_05111 [Aphanomyces astac... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL159nonsL159Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR053ncniR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR029ngnoR029Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G02760.1NO17G02760.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|560271gene_9345Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100741g4gene6307Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G02760.1NO17G02760.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G02760 ID=NO17G02760|Name=NO17G02760|organism=Nannochloropsis oceanica|type=gene|length=1688bp
ATGAAGGAGCAGGCAGCAGACATCCCCACAGCACCACTACCACCACACCG
GCGATGGATCCACGATATGGAAGCCGTAAGCTGTCGGGGCTGCCGAGCGC
CATTCACTTCCCTCGCCCGTCGGAAGCACCACTGCCGGGCTTGCGGGCGC
GTCTTCTGCTTGGCATGCACACGACACAAACTCTTCATCCCGCCCGCCGA
CGTAATCCGTCCACGCAAAACCCCCGCCGCTGCCGTTATCCCGCTTAACC
TCGATCCTTATTTGCCCCAGCGCGTCTGCGACACTTGCGCCTCCCTCCTC
CTCCCCCTCCAACCTGCCCTCCGCCTCACCAGCAGCAAAGCCACACAAGC
CCTCCACATTGACCGTCGCTCTTGGGCAAGATATTTCAATCATCCCGTGC
AATTCTCACTGGGAGAAGAAATCAAAAAGGCCTCTTACACTCTGTGTAAT
TTTACGGGAGACAGTGCCTTGGGAGGGAGAGACAGCATTCCGGGAGAGCT
CTTGTGGGGAGCCAAGGGCCTGGCGTTTCTGACGGTGGTCAAGGCAGGCA
Tgtttgtcacggctcgaatagggacagggctggtgattgcacggttgcat
gacgaagAGGACGAGGAGGAGGAGGAGGAGGAAGGGGGGGAGGGAGGGAG
GGAAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGGGTAAGGTGGTCGGC
GCCGTCGGCGTTGGGGTGCACGGGAGTGGGATACGGATTTTCGTTCGGAG
TGGAAGTGgtacgtgttttgaatcaaagatgttgttattttttagctttg
tgttcacgtgtatttctgagtgtttgaagtgtcccttcttcctaagacgt
cgaacccccgctgttggggtgcagttcttcttaccctccctccgttcttc
cctcccttccccccctccttcagACGGATCTGCTCGTCATCCTCTCTTCC
CAAGAAGCCGTCAATGCCTTCTCTACCCGCGCACAAATCTCTCTCGGGAC
GGAGCTAGGGATCGCCCTCGGTCCCCTGGGCCGCACCGCCGCCACTGACC
TCCACTACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGAGGAGG
AGCAGGCTGGGAGCGGGGTTCAGCTACGGCCATAGCAGAGGTGCTTTTAT
GGGGGTGTCAGTGGAGGGGTCTGTACTAACGGCACGGGAAAGGGTAAACC
AAGAGTTTTATGGAATGAAAGACGTGACGGTAGGAGGTATTTTAAGTGGG
GAGATACCGCCACCATTGGCCGCGTTTCCCTTGTATAAAGCCTTGGAAGA
GGTGATGGGGGAGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGCGTGTG
GTACGAGGTGGGACTCAAGGAACGGCATGCATGGGCAGCAACGATCCAAA
ACGGGGAGGGACGGAGGGGAGGAGGGAAGGCAAGAGGAGGAGGAGGAGGA
TGATGGGGAGGATGAGGAGGTGGGAGGGTTGTTGAGAGGGATGGGTGGGG
AGATGATGACCTTTCAGGTAATGGGGGAGTAGTGGGAGGTGTGGGGGTGG
AGGGAAAACGGGAGGAGGGGGAGGACGAGGAAGACGAAGAGGAGGGGGAG
AAGGACGAAGACGAAGAGGAGAGGGAGAAGGAGGAAGGGGGCGTGTACAG
AACACAGGAGGAAAAAACAAGAAACATGCACCACAAGG
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protein sequence of NO17G02760.1

>NO17G02760.1-protein ID=NO17G02760.1-protein|Name=NO17G02760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=437bp
MKEQAADIPTAPLPPHRRWIHDMEAVSCRGCRAPFTSLARRKHHCRACGR
VFCLACTRHKLFIPPADVIRPRKTPAAAVIPLNLDPYLPQRVCDTCASLL
LPLQPALRLTSSKATQALHIDRRSWARYFNHPVQFSLGEEIKKASYTLCN
FTGDSALGGRDSIPGELLWGAKGLAFLTVVKAGIGRGGGGGGRGGGREGR
RRRRRRRRGRVRWSAPSALGCTGVGYGFSFGVEVTDLLVILSSQEAVNAF
STRAQISLGTELGIALGPLGRTAATDLHYSSSSSSSSSSRRRRSRLGAGF
SYGHSRGAFMGVSVEGSVLTARERVNQEFYGMKDVTVGGILSGEIPPPLA
AFPLYKALEEVMGEGEGGREGGREACGTRWDSRNGMHGQQRSKTGRDGGE
EGRQEEEEEDDGEDEEVGGLLRGMGGEMMTFQVMGE*
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Synonyms
Publications