NO17G02740, NO17G02740 (gene) Nannochloropsis oceanica

Overview
NameNO17G02740
Unique NameNO17G02740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1353
Alignment locationchr17:802539..803891 +

Link to JBrowse

Properties
Property NameValue
DescriptionQueuine tRNA-ribosyltransferase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:802539..803891 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006400tRNA modification
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016763transferase activity, transferring pentosyl groups
GO:0016740transferase activity
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR036511TGT-like_sf
IPR002616tRNA_ribo_trans-like
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
[Close]
BLAST of NO17G02740 vs. NCBI_GenBank
Match: EWM24160.1 (queuine trna-ribosyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 716.8 bits (1849), Expect = 4.100e-203
Identity = 359/448 (80.13%), Postives = 380/448 (84.82%), Query Frame = 0 
Query:    1 MPDETEVSPPPPISAPPLVEEGIPPTFTAASPALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHPELSPQIILGNTYHLALQPGTDLLEEMGGLHKFMNWPRNLLTDSGGFQMVSLLALAEITEEGVTFQSPIDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTENDDRFREATARSIRWLDRCIQAHSRPQEQNLFGIIQGGLDTSPGGLREGCLREMIARDCPGYAIGGLAGGESKEAFWKVVAQSAAGLPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALVGTGVLKLKNNACGNETGKPIEEGCQCMTCKNYSRAAIHRLLKSGALGCQLVTYHNLAYMLGLMRRMRKAIMEGGDAFPSFVLAFLKAHYS------GEIAGKKGEKVDVTVPEWVREALGVAGIEVPQTFQ 443
            M D      P     PPLV EG  P+FT ASPALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLH +LSPQIILGNTYHLALQPGT+LLEEMGGLH+FM WPRNLLTDSGGFQMVSLLALAEITEEGV FQSP+DGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVT +  RF EATARSIRWLDRC +AHSRP+EQNLFGIIQGGLDTSPGGLR+ CL  M+ARDCPGYAIGGLAGGESKEAFWKVVAQ  A LPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVAL   GVLKLKN AC  E  + I+  C CM C++YS+AA+HRLLKSGALGCQLVTYHNLAYMLGLMRRMR AIM+GG AFP FV+ FL  HY+      G    +KGE     VPEWVREAL VAGI+VP   Q
Sbjct:    1 MGDNDSTGAPSEPILPPLVPEGTSPSFTPASPALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHEDLSPQIILGNTYHLALQPGTELLEEMGGLHEFMQWPRNLLTDSGGFQMVSLLALAEITEEGVRFQSPVDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTVDHARFVEATARSIRWLDRCRKAHSRPREQNLFGIIQGGLDTSPGGLRDECLTAMVARDCPGYAIGGLAGGESKEAFWKVVAQCTAALPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALRDAGVLKLKNKACAGEEKQAIDPLCGCMVCRHYSQAALHRLLKSGALGCQLVTYHNLAYMLGLMRRMRSAIMQGGQAFPHFVVGFLTTHYAWKNREEGVECRRKGE--CGMVPEWVREALAVAGIDVPDQSQ 446
[Close]
BLAST of NO17G02740 vs. NCBI_GenBank
Match: XP_008611673.1 (queuine tRNA-ribosyltransferase [Saprolegnia diclina VS20] >EQC34801.1 queuine tRNA-ribosyltransferase [Saprolegnia diclina VS20])

HSP 1 Score: 518.1 bits (1333), Expect = 2.800e-143
Identity = 256/421 (60.81%), Postives = 315/421 (74.82%), Query Frame = 0 
Query:   18 LVEEGIPPTFTAASPALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHPELSPQIILGNTYHLALQPGTDLLEEMGGLHKFMNWPRNLLTDSGGFQMVSLLALAEITEEGVTFQSPIDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTENDDRFREATARSIRWLDRCIQAHSRPQEQNLFGIIQGGLDTSPGGLREGCLREMIARDCPGYAIGGLAGGESKEAFWKVVAQSAAGLPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALVGTGVLKLKNNACGNETGKPIEEGCQCMTCKNYSRAAIHRLLKS-GALGCQLVTYHNLAYMLGLMRRMRKAIMEGGDAFPSFVLAFLKAHYSGEIAGKKGEKVDVTVPEWVREALGVAGIEV 438
            +V +G P  FT  SPAL   +   + RARA  +HLPHG + TPVFMPVGT+GTIKGI TEQ+  P +  +I+L NTYHLAL+PGTDL+++MGGLH++MNW RN+LTDSGGFQMVSLL LA+ITE GV FQSP+DGT+MLLTPEMSIAHQN IG+DI+M LDDV  S  E+D RF EAT R++RW+DRCI AH +P  QNLFGI+QGGLDTS GGLR+ C++ MI R+ PGYAIGGLAGGE K +FW VVA SA  LP  KPRYLMGVGYP+DLVVC+ALGVDM+DCVYPTRT RFG  +   G+L+LK     N+T  P++  C C  C  Y+RA +H+++K+ G++G QLVTYHN+ YML LM  +R AI+   + FP+FV AF+KA +  E            VP WV EAL VAGI +
Sbjct:    5 VVHDGGPVEFTKESPALKLDVLKTFNRARACNLHLPHGTVHTPVFMPVGTQGTIKGITTEQMAMPPIDCKILLANTYHLALRPGTDLIDDMGGLHQYMNWNRNILTDSGGFQMVSLLELAQITEVGVEFQSPVDGTKMLLTPEMSIAHQNNIGADIIMALDDVAPSTIEDDARFLEATDRTMRWIDRCIAAHKKPHCQNLFGIVQGGLDTSEGGLRDRCIQGMIERNLPGYAIGGLAGGEDKTSFWNVVAMSAERLPANKPRYLMGVGYPVDLVVCSALGVDMFDCVYPTRTGRFGTGITSKGLLRLKLAEFANDTA-PLDADCACYVCTKYTRAYLHQVMKTEGSIGPQLVTYHNITYMLYLMSNVRAAIL--NETFPAFVRAFMKAWFPTE-----------PVPTWVVEALTVAGISL 411
[Close]
BLAST of NO17G02740 vs. NCBI_GenBank
Match: OQR89747.1 (queuine tRNA-ribosyltransferase [Thraustotheca clavata])

HSP 1 Score: 506.1 bits (1302), Expect = 1.100e-139
Identity = 248/408 (60.78%), Postives = 307/408 (75.25%), Query Frame = 0 
Query:   27 FTAASPALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHPELSPQIILGNTYHLALQPGTDLLEEMGGLHKFMNWPRNLLTDSGGFQMVSLLALAEITEEGVTFQSPIDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTENDDRFREATARSIRWLDRCIQAHSRPQEQNLFGIIQGGLDTSPGGLREGCLREMIARDCPGYAIGGLAGGESKEAFWKVVAQSAAGLPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALVGTGVLKLKNNACGNETGKPIEEGCQCMTCKNYSRAAIHRLLKS-GALGCQLVTYHNLAYMLGLMRRMRKAIMEGGDAFPSFVLAFLKAHYSGEIAGKKGEKVDVTVPEWVREALGVA 434
            F+  SPAL   +   + RARA  +HLPHG + TPVFMPVGT+GTIKGI TEQ+  P +  +I+L NTYHLAL+PGTDL+++MGGLH++MNW RN+LTDSGGFQMVSLL LA+ITE GV FQSP+DGT MLLTPEMSIAHQN IG+DI+M LDDV  S  E+D RF EAT R++RW+DRCI AH +P  QNLFGI+QGGLDTS GGLR+ C++ MI R+ PGYAIGGLAGGE K +FWKVVA SA  LP  KPRYLMGVGYP+DLVVC+ALGVDM+DCVYPTRT RFG  +   G+L+LK      ++  P++  C C  C+ Y+R+ +H+++K+ G++G QL+TYHN+ YML LM  +R AI++G   FP FV  F+K+ Y  E            VPEWV EAL VA
Sbjct:    8 FSKESPALKLDVLKAFNRARACELHLPHGTVHTPVFMPVGTQGTIKGITTEQMALPPIDCKILLANTYHLALRPGTDLIDDMGGLHQYMNWNRNILTDSGGFQMVSLLELAQITEVGVEFQSPVDGTTMLLTPEMSIAHQNNIGADIIMALDDVAPSTIEDDARFLEATDRTLRWIDRCIAAHKKPHCQNLFGIVQGGLDTSIGGLRDRCIQGMIERNLPGYAIGGLAGGEDKTSFWKVVAMSAERLPANKPRYLMGVGYPVDLVVCSALGVDMFDCVYPTRTGRFGTGITSKGLLRLKLAEFAMDS-SPLDSECACFVCQKYTRSYLHQVMKTEGSIGPQLITYHNITYMLHLMTSVRNAILQGN--FPQFVQYFMKSWYPNE-----------PVPEWVIEALKVA 401
[Close]
BLAST of NO17G02740 vs. NCBI_GenBank
Match: OQR82818.1 (queuine tRNA-ribosyltransferase [Achlya hypogyna])

HSP 1 Score: 503.1 bits (1294), Expect = 9.300e-139
Identity = 253/423 (59.81%), Postives = 317/423 (74.94%), Query Frame = 0 
Query:   17 PLVEEGIPPTFTAASPALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHPELSPQIILGNTYHLALQPGTDLLEEMGGLHKFMNWPRNLLTDSGGFQMVSLLALAEITEEGVTFQSPIDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTENDDRFREATARSIRWLDRCIQAHSRPQEQNLFGIIQGGLDTSPGGLREGCLREMIARDCPGYAIGGLAGGESKEAFWKVVAQSAAGLPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALVGT-GVLKLKNNACGNETGKPIEEGCQCMTCKNYSRAAIHRLLKS-GALGCQLVTYHNLAYMLGLMRRMRKAIMEGGDAFPSFVLAFLKAHYSGEIAGKKGEKVDVTVPEWVREALGVAGIEV 438
            P+V +G P  F+A SPAL   +   + RARA  +HLPHG + TPVFMPVGT+GTIKGI TEQ+  P +  +I+L NTYHLAL+PGTDL+++MGGLH++MNW RN+LTDSGGFQMVSLL LA+ITE GV FQSP+DGT+MLLTPEMSIAHQN IG+DI+M LDDV  S  E+D RF EAT R++RW+DRCI AH +P  QNLFGI+QGGLDTS GGLR+ C++ MI R+ PGYAIGGLAGGE K +FW VVA SA  LP  KPRYLMGVGYP+DLVVC+ALGVDM+DCVYPTRT   G  +  T G+L+LK      +T  P++  C C  C+ Y+RA +H+++K+ G++G QL+TYHN+ YML LM  +R AI++G   FP+FV  F+++ Y  E            VP+WV EAL VAGI +
Sbjct:    6 PVVHDGGPVEFSAESPALKLDVLKTFNRARACNLHLPHGTVRTPVFMPVGTQGTIKGITTEQMALPPIDCKILLANTYHLALRPGTDLIDDMGGLHEYMNWNRNILTDSGGFQMVSLLELAQITEVGVEFQSPVDGTKMLLTPEMSIAHQNNIGADIIMALDDVAPSTIEDDARFLEATDRTMRWIDRCIAAHKKPHCQNLFGIVQGGLDTSVGGLRDRCIQGMIERNLPGYAIGGLAGGEDKTSFWNVVAMSAERLPANKPRYLMGVGYPVDLVVCSALGVDMFDCVYPTRT---GPLIPSTQGLLRLKLAEFAMDTA-PLDADCACYVCQKYTRAYLHQVMKTEGSIGPQLITYHNITYMLHLMTCVRNAILDG--TFPTFVRQFMQSWYPTE-----------PVPDWVVEALKVAGISL 411
[Close]
BLAST of NO17G02740 vs. NCBI_GenBank
Match: XP_009535468.1 (hypothetical protein PHYSODRAFT_355889 [Phytophthora sojae] >EGZ08835.1 hypothetical protein PHYSODRAFT_355889 [Phytophthora sojae])

HSP 1 Score: 498.8 bits (1283), Expect = 1.700e-137
Identity = 246/419 (58.71%), Postives = 310/419 (73.99%), Query Frame = 0 
Query:   33 ALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHPELSPQIILGNTYHLALQPGTDLLEEM-GGLHKFMNWPRNLLTDSGGFQMVSLLALAEITEEGVTFQSPIDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTENDDRFREATARSIRWLDRCIQAHSRPQEQNLFGIIQGGLDTSPGGLREGCLREMIARDCPGYAIGGLAGGESKEAFWKVVAQSAAGLPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALVGTGVLKLKNNACGNETGKPIEEGCQCMTCKNYSRAAIHRLLK-----------SGALGCQLVTYHNLAYMLGLMRRMRKAIMEGGDAFPSFVLAFLKAHYSGEIAGKKGEKVDVTVPEWVREALGVAGIEVPQ 440
            AL F +  R+ RARAAT+ LPHGP+ TPVFMPVGT+G IKG+ T Q+    +  QI L NTYHLAL+PGTD+L ++ G LH+FM WPRNLLTDSGGFQMVSL  L E++E GV F+S +DG+ M+LTPE SIAHQN IG+DI+M LDDVVSS+ ++D+RF+EA  R++RWLDRCIQAH+ P +QNLFGI+QGGLD S GGLR+ CL E+I RD PGYAIGGLAGGESKEAFWKVVA+  A LPE KPRYLMGVGYPLDLVVC+ALGVDM+DCVYPTRTARFG A+V +G+LKLK+  C ++  +PI++ C+C  CK YSRA +  LLK           +G++G  L+TYHN+ YML LMRR+R++I++  + F  FV  F+   +                P+W  +AL  A I + +
Sbjct:    6 ALTFEVLGRYHRARAATLTLPHGPVRTPVFMPVGTQGAIKGLTTPQMQEKPVDCQIFLANTYHLALRPGTDVLAQLPGKLHEFMQWPRNLLTDSGGFQMVSLSRLCEVSEHGVQFESFVDGSTMILTPEASIAHQNNIGADIIMALDDVVSSLADDDERFKEACERTVRWLDRCIQAHANPDKQNLFGIVQGGLDVSEGGLRDQCLSELIKRDLPGYAIGGLAGGESKEAFWKVVAKCTAQLPENKPRYLMGVGYPLDLVVCSALGVDMFDCVYPTRTARFGTAIVPSGLLKLKSAKCEHDE-RPIDDTCECFVCKKYSRAYLRVLLKKEETFGDPEETTGSIGAHLITYHNVTYMLNLMRRLRQSIID--EKFEEFVRNFMLQQFPNR-----------DYPQWAVDALTEAKISLDE 410
[Close]
BLAST of NO17G02740 vs. NCBI_GenBank
Match: XP_009839724.1 (queuine tRNA-ribosyltransferase [Aphanomyces astaci] >ETV70659.1 queuine tRNA-ribosyltransferase [Aphanomyces astaci])

HSP 1 Score: 498.8 bits (1283), Expect = 1.700e-137
Identity = 251/434 (57.83%), Postives = 313/434 (72.12%), Query Frame = 0 
Query:    7 VSPPPPISAPPLVEEGIPPTFTAASPALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHPELSPQIILGNTYHLALQPGTDLLEEMGGLHKFMNWPRNLLTDSGGFQMVSLLALAEITEEGVTFQSPIDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTENDDRFREATARSIRWLDRCIQAHSRPQEQNLFGIIQGGLDTSPGGLREGCLREMIARDCPGYAIGGLAGGESKEAFWKVVAQSAAGLPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALVGTGVLKLKNNACGNETGKPIEEGCQCMTCKNYSRAAIHRLL-KSGALGCQLVTYHNLAYMLGLMRRMRKAIMEGGDAFPSFVLAFLKAHYSGEIAGKKGEKVDVTVPEWVREALGVAGIEVPQ 440
            ++ PPP   PP+V       F+  SPAL   +   + RARA  +HLPHG + TP+FMPVGT+GTIKGI  EQ+  P +  +I+L NTYHLAL+PGTDLL+++GGLH FM W RN+LTDSGGFQMVSLL LA+ITE GV FQSP+DGT MLLTPEMSI HQN IG+DI+M LDDV  S  ++D RF EAT R++RW+DRCI AH RP  QNLFGI+QGGLDT PGGLRE C++ +I R+ PGYAIGGLAGGE K +FW VVA  A  LP  KPRYLMGVGYP+DLVVC+ALGVDM+DCVYPTRT RFG A+   G+L++K+    ++ G P++  C C  C  YSRA +H ++ K G++G QL+TYHN+AYML LM ++R+AI+   D+FPSFV  F+   + G             VP WV +AL   GI + Q
Sbjct:    1 MTTPPP--KPPVV------AFSNDSPALKLDVLHTYGRARACDLHLPHGTVHTPIFMPVGTQGTIKGITAEQMALPPIDCKILLANTYHLALRPGTDLLKDVGGLHDFMGWHRNILTDSGGFQMVSLLELAQITEVGVEFQSPVDGTTMLLTPEMSITHQNNIGADIIMALDDVAPSTIQDDARFLEATERTLRWIDRCIAAHKRPATQNLFGIVQGGLDTKPGGLRERCIQGLIDRNLPGYAIGGLAGGEDKTSFWTVVALCAERLPANKPRYLMGVGYPVDLVVCSALGVDMFDCVYPTRTGRFGTAITPKGLLRIKSADFASD-GGPLDATCACFVCTEYSRAYLHHVMKKDGSIGPQLITYHNVAYMLHLMAQVRQAIL--NDSFPSFVRVFMAEWHQG-----------TPVPAWVHDALNYVGIPLNQ 412
[Close]
BLAST of NO17G02740 vs. NCBI_GenBank
Match: XP_008894180.1 (queuine tRNA-ribosyltransferase [Phytophthora parasitica INRA-310] >ETI41547.1 queuine tRNA-ribosyltransferase [Phytophthora parasitica P1569] >ETK81591.1 queuine tRNA-ribosyltransferase [Phytophthora parasitica] >ETL34997.1 queuine tRNA-ribosyltransferase [Phytophthora parasitica] >ETN20203.1 queuine tRNA-ribosyltransferase [Phytophthora parasitica INRA-310] >ETO70192.1 queuine tRNA-ribosyltransferase [Phytophthora parasitica P1976] >ETP11294.1 queuine tRNA-ribosyltransferase [Phytophthora parasitica CJ01A1])

HSP 1 Score: 496.5 bits (1277), Expect = 8.700e-137
Identity = 245/417 (58.75%), Postives = 310/417 (74.34%), Query Frame = 0 
Query:   33 ALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHPELSPQIILGNTYHLALQPGTDLLEEM-GGLHKFMNWPRNLLTDSGGFQMVSLLALAEITEEGVTFQSPIDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTENDDRFREATARSIRWLDRCIQAHSRPQEQNLFGIIQGGLDTSPGGLREGCLREMIARDCPGYAIGGLAGGESKEAFWKVVAQSAAGLPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALVGTGVLKLKNNACGNETGKPIEEGCQCMTCKNYSRAAIHRLLK-----------SGALGCQLVTYHNLAYMLGLMRRMRKAIMEGGDAFPSFVLAFLKAHYSGEIAGKKGEKVDVTVPEWVREALGVAGIEV 438
            AL F +  R+ RARAAT+ LPHG + TPVFMPVGT+G IKG+ T Q+    +  QI L NTYHLAL+PGT++L ++ G LH+FM WPRNLLTDSGGFQMVSL  L E++E GV F+S +DG+ M+LTPE SIAHQNRIG+DI+M LDDVVSS+ ++D+RF+EA  R++RWLDRCIQAH+ P +QNLFGI+QGGLD S GGLR+ CL E+I RD PGYAIGGLAGGESKEAFWKVVA+  A LPE KPRYLMGVGYPLDLVVC+ALGVDM+DCVYPTRTARFG A+V +G+LKLK+  C ++  +PI++ C+C  CK Y+RA +  LLK           +G++G  L+TYHN+ YML LMRR+R++I++  + F  FV  F+   +            D   P+W  +AL  A I +
Sbjct:    6 ALSFEVLGRYHRARAATLTLPHGEVRTPVFMPVGTQGAIKGLTTPQMQEKPVDCQIFLANTYHLALRPGTEVLAQLPGKLHEFMQWPRNLLTDSGGFQMVSLSRLCEVSEHGVQFESFVDGSTMILTPEASIAHQNRIGADIIMALDDVVSSLADDDERFKEACGRTVRWLDRCIQAHAHPDKQNLFGIVQGGLDVSEGGLRDQCLSELIQRDLPGYAIGGLAGGESKEAFWKVVAKCTAQLPENKPRYLMGVGYPLDLVVCSALGVDMFDCVYPTRTARFGTAIVPSGLLKLKSAKCEHD-DRPIDDTCECFVCKKYTRAYLRVLLKKEETFGDAEETTGSIGAHLITYHNVTYMLNLMRRLRQSIID--EKFEQFVQNFMLQQFP-----------DRNYPQWAVDALTEAKISL 408
[Close]
BLAST of NO17G02740 vs. NCBI_GenBank
Match: ETL88238.1 (queuine tRNA-ribosyltransferase [Phytophthora parasitica])

HSP 1 Score: 496.1 bits (1276), Expect = 1.100e-136
Identity = 245/417 (58.75%), Postives = 310/417 (74.34%), Query Frame = 0 
Query:   33 ALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHPELSPQIILGNTYHLALQPGTDLLEEM-GGLHKFMNWPRNLLTDSGGFQMVSLLALAEITEEGVTFQSPIDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTENDDRFREATARSIRWLDRCIQAHSRPQEQNLFGIIQGGLDTSPGGLREGCLREMIARDCPGYAIGGLAGGESKEAFWKVVAQSAAGLPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALVGTGVLKLKNNACGNETGKPIEEGCQCMTCKNYSRAAIHRLLK-----------SGALGCQLVTYHNLAYMLGLMRRMRKAIMEGGDAFPSFVLAFLKAHYSGEIAGKKGEKVDVTVPEWVREALGVAGIEV 438
            AL F +  R+ RARAAT+ LPHG + TPVFMPVGT+G IKG+ T Q+    +  QI L NTYHLAL+PGT++L ++ G LH+FM WPRNLLTDSGGFQMVSL  L E++E GV F+S +DG+ M+LTPE SIAHQNRIG+DI+M LDDVVSS+ ++D+RF+EA  R++RWLDRCIQAH+ P +QNLFGI+QGGLD S GGLR+ CL E+I RD PGYAIGGLAGGESKEAFWKVVA+  A LPE KPRYLMGVGYPLDLVVC+ALGVDM+DCVYPTRTARFG A+V +G+LKLK+  C ++  +PI++ C+C  CK Y+RA +  LLK           +G++G  L+TYHN+ YML LMRR+R++I++  + F  FV  F+   +            D   P+W  +AL  A I +
Sbjct:    6 ALSFDVLGRYHRARAATLTLPHGEVRTPVFMPVGTQGAIKGLTTPQMQEKPVDCQIFLANTYHLALRPGTEVLAQLPGKLHEFMQWPRNLLTDSGGFQMVSLSRLCEVSEHGVQFESFVDGSTMILTPEASIAHQNRIGADIIMALDDVVSSLADDDERFKEACGRTVRWLDRCIQAHAHPDKQNLFGIVQGGLDVSEGGLRDQCLSELIQRDLPGYAIGGLAGGESKEAFWKVVAKCTAQLPENKPRYLMGVGYPLDLVVCSALGVDMFDCVYPTRTARFGTAIVPSGLLKLKSAKCEHD-DRPIDDTCECFVCKKYTRAYLRVLLKKEETFGDAEETTGSIGAHLITYHNVTYMLNLMRRLRQSIID--EKFEQFVQNFMLQQFP-----------DRNYPQWAVDALTEAKISL 408
[Close]
BLAST of NO17G02740 vs. NCBI_GenBank
Match: KUG01710.1 (Queuine tRNA-ribosyltransferase [Phytophthora nicotianae])

HSP 1 Score: 496.1 bits (1276), Expect = 1.100e-136
Identity = 245/417 (58.75%), Postives = 310/417 (74.34%), Query Frame = 0 
Query:   33 ALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHPELSPQIILGNTYHLALQPGTDLLEEM-GGLHKFMNWPRNLLTDSGGFQMVSLLALAEITEEGVTFQSPIDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTENDDRFREATARSIRWLDRCIQAHSRPQEQNLFGIIQGGLDTSPGGLREGCLREMIARDCPGYAIGGLAGGESKEAFWKVVAQSAAGLPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALVGTGVLKLKNNACGNETGKPIEEGCQCMTCKNYSRAAIHRLLK-----------SGALGCQLVTYHNLAYMLGLMRRMRKAIMEGGDAFPSFVLAFLKAHYSGEIAGKKGEKVDVTVPEWVREALGVAGIEV 438
            AL F +  R+ RARAAT+ LPHG + TPVFMPVGT+G IKG+ T Q+    +  QI L NTYHLAL+PGT++L ++ G LH+FM WPRNLLTDSGGFQMVSL  L E++E GV F+S +DG+ M+LTPE SIAHQNRIG+DI+M LDDVVSS+ ++D+RF+EA  R++RWLDRCIQAH+ P +QNLFGI+QGGLD S GGLR+ CL E+I RD PGYAIGGLAGGESKEAFWKVVA+  A LPE KPRYLMGVGYPLDLVVC+ALGVDM+DCVYPTRTARFG A+V +G+LKLK+  C ++  +PI++ C+C  CK Y+RA +  LLK           +G++G  L+TYHN+ YML LMRR+R++I++  + F  FV  F+   +            D   P+W  +AL  A I +
Sbjct:    4 ALFFEVLGRYHRARAATLTLPHGEVRTPVFMPVGTQGAIKGLTTPQMQEKPVDCQIFLANTYHLALRPGTEVLAQLPGKLHEFMQWPRNLLTDSGGFQMVSLSRLCEVSEHGVQFESFVDGSTMILTPEASIAHQNRIGADIIMALDDVVSSLADDDERFKEACGRTVRWLDRCIQAHAHPDKQNLFGIVQGGLDVSEGGLRDQCLSELIQRDLPGYAIGGLAGGESKEAFWKVVAKCTAQLPENKPRYLMGVGYPLDLVVCSALGVDMFDCVYPTRTARFGTAIVPSGLLKLKSAKCEHD-DRPIDDTCECFVCKKYTRAYLRVLLKKEETFGDAEETTGSIGAHLITYHNVTYMLNLMRRLRQSIID--EKFEQFVQNFMLQQFP-----------DRNYPQWAVDALTEAKISL 406
[Close]
BLAST of NO17G02740 vs. NCBI_GenBank
Match: POM70362.1 (Queuine tRNA-ribosyltransferase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 495.7 bits (1275), Expect = 1.500e-136
Identity = 245/415 (59.04%), Postives = 310/415 (74.70%), Query Frame = 0 
Query:   33 ALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHPELSPQIILGNTYHLALQPGTDLLEEM-GGLHKFMNWPRNLLTDSGGFQMVSLLALAEITEEGVTFQSPIDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTENDDRFREATARSIRWLDRCIQAHSRPQEQNLFGIIQGGLDTSPGGLREGCLREMIARDCPGYAIGGLAGGESKEAFWKVVAQSAAGLPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALVGTGVLKLKNNACGNETGKPIEEGCQCMTCKNYSRAAIHRLLK-----------SGALGCQLVTYHNLAYMLGLMRRMRKAIMEGGDAFPSFVLAFLKAHYSGEIAGKKGEKVDVTVPEWVREALGVAGI 436
            AL F +  R+ RARAAT+ LPHG + TPVFMPVGT+G IKG+ T Q+    +  QI L NTYHLAL+PGT++L ++ G LH+FM WPRNLLTDSGGFQMVSL  L E++E GV F+S +DG+ MLLTPE SIAHQNRIG+DI+M LDDVVSS+ ++D+RF+EA  R++RWLDRCI+AH+ P +QNLFGI+QGGLD S GGLR+ CL E+I RD PGYAIGGLAGGESKEAFWKVVA+  A LPE KPRYLMGVGYPLDLVVC+ALGVDM+DCVYPTRTARFG A+V +G+LKLK+  C ++  +PI++ C+C  CK Y+RA +  LLK           +G++G  L+TYHN+ YML LMRR+R++I++  + F  FV  F+   +            +   P+W  +AL VA I
Sbjct:    4 ALSFEVLGRYHRARAATLTLPHGEVRTPVFMPVGTQGAIKGLTTPQMQDQPVDCQIFLANTYHLALRPGTEVLAQLPGKLHEFMQWPRNLLTDSGGFQMVSLSRLCEVSEHGVQFESFVDGSTMLLTPEASIAHQNRIGADIIMALDDVVSSLADDDERFKEACGRTVRWLDRCIKAHAHPDKQNLFGIVQGGLDVSEGGLRDQCLSELIKRDLPGYAIGGLAGGESKEAFWKVVAKCTAQLPENKPRYLMGVGYPLDLVVCSALGVDMFDCVYPTRTARFGTAIVPSGLLKLKSAKCEHDR-RPIDDTCECFVCKKYTRAYLRVLLKKEETFGDTEKTTGSIGAHLITYHNVTYMLNLMRRLRQSIID--EKFEEFVQNFMLQQFP-----------ERDYPQWAVDALTVAKI 404
The following BLAST results are available for this feature:
BLAST of NO17G02740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24160.14.100e-20380.13queuine trna-ribosyltransferase [Nannochloropsis g... [more]
XP_008611673.12.800e-14360.81queuine tRNA-ribosyltransferase [Saprolegnia dicli... [more]
OQR89747.11.100e-13960.78queuine tRNA-ribosyltransferase [Thraustotheca cla... [more]
OQR82818.19.300e-13959.81queuine tRNA-ribosyltransferase [Achlya hypogyna][more]
XP_009535468.11.700e-13758.71hypothetical protein PHYSODRAFT_355889 [Phytophtho... [more]
XP_009839724.11.700e-13757.83queuine tRNA-ribosyltransferase [Aphanomyces astac... [more]
XP_008894180.18.700e-13758.75queuine tRNA-ribosyltransferase [Phytophthora para... [more]
ETL88238.11.100e-13658.75queuine tRNA-ribosyltransferase [Phytophthora para... [more]
KUG01710.11.100e-13658.75Queuine tRNA-ribosyltransferase [Phytophthora nico... [more]
POM70362.11.500e-13659.04Queuine tRNA-ribosyltransferase [Phytophthora palm... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL159nonsL159Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR053ncniR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR029ngnoR029Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G02740.1NO17G02740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|606467gene_9343Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100741g2gene6309Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G02740.1NO17G02740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G02740 ID=NO17G02740|Name=NO17G02740|organism=Nannochloropsis oceanica|type=gene|length=1353bp
ATGCCCGACGAGACCGAAGTGTCACCACCCCCACCAATTTCCGCACCACC
TCTCGTCGAGGAAGGTATCCCGCCCACATTCACGGCGGCCTCCCCTGCCC
TCTGCTTTCACATCCACGCTCGATGGCGACGCGCAAGGGCCGCCACCGTC
CACTTGCCCCACGGTCCCCTCGCGACGCCTGTCTTCATGCCCGTGGGCAC
CAAGGGCACAATTAAAGGCATCCCAACCGAACAATTACTCCATCCAGAAC
TTTCTCCTCAGATTATTCTGGGGAACACATACCACCTCGCCTTGCAGCCG
GGGACGGACCTGCTGGAGGAAATGGGGGGCTTGCACAAATTTATGAACTG
GCCTCGCAACCTCCTCACCGACTCGGGAGGATTCCAGATGGTCTCCCTCT
TGGCCTTGGCCGAGATCACGGAGGAAGGTGTGACGTTTCAAAGCCCTATC
GATGGGACGCAGATGCTGCTGACGCCTGAGATGTCCATTGCGCACCAAAA
CCGGATAGGGTCCGATATAATGATGCAGCTTGACGATGTCGTGTCTTCTG
TCACTGAGAACGACGACCGCTTCCGTGAAGCCACCGCGCGATCCATCCGG
TGGTTAGATCGGTGCATACAAGCACACTCTCGACCGCAAGAACAGAATCT
GTTCGGCATCATTCAGGGGGGGTTGGATACTTCCCCGGGCGGATTGCGGG
AAGGGTGCCTGCGCGAAATGATCGCCCGCGACTGTCCAGGTTACGCGATT
GGGGGTCTAGCGGGTGGAGAGAGCAAGGAAGCATTTTGGAAGGTGGTGGC
ACAGTCTGCCGCGGGTTTACCCGAGGGGAAACCGAGGTATTTGATGGGTG
TCGGCTATCCGCTAGACTTGGTGGTGTGCACGGCGTTGGGCGTGGATATG
TATGACTGTGTCTACCCCACTCGCACGGCCAGATTTGGCGTCGCGCTTGT
TGGAACGGGGGTTTTGAAGCTTAAGAACAACGCATGTGGGAATGAGACGG
GCAAACCTATCGAAGAGGGGTGTCAGTGCATGACGTGCAAGAACTACTCG
CGCGCAGCGATACACCGGTTGCTCAAGTCGGGAGCTCTGGGGTGTCAATT
AGTCACGTACCACAACCTCGCTTACATGCTCGGATTGATGCGAAGAATGC
GAAAGGCGATTATGGAGGGAGGAGACGCTTTTCCTAGCTTTGTATTGGCG
TTTTTGAAAGCTCACTATTCTGGTGAGATTGCTGGGAAGAAAGGAGAAAA
AGTAGATGTGACAGTGCCTGAGTGGGTGAGGGAAGCGCTGGGTGTAGCGG
GCATTGAAGTGCCACAGACATTTCAGAGTGAGGGAGAAATTGAAAAAGAT
TAG
back to top

protein sequence of NO17G02740.1

>NO17G02740.1-protein ID=NO17G02740.1-protein|Name=NO17G02740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=451bp
MPDETEVSPPPPISAPPLVEEGIPPTFTAASPALCFHIHARWRRARAATV
HLPHGPLATPVFMPVGTKGTIKGIPTEQLLHPELSPQIILGNTYHLALQP
GTDLLEEMGGLHKFMNWPRNLLTDSGGFQMVSLLALAEITEEGVTFQSPI
DGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTENDDRFREATARSIR
WLDRCIQAHSRPQEQNLFGIIQGGLDTSPGGLREGCLREMIARDCPGYAI
GGLAGGESKEAFWKVVAQSAAGLPEGKPRYLMGVGYPLDLVVCTALGVDM
YDCVYPTRTARFGVALVGTGVLKLKNNACGNETGKPIEEGCQCMTCKNYS
RAAIHRLLKSGALGCQLVTYHNLAYMLGLMRRMRKAIMEGGDAFPSFVLA
FLKAHYSGEIAGKKGEKVDVTVPEWVREALGVAGIEVPQTFQSEGEIEKD
*
back to top
Synonyms
Publications