NO17G02340, NO17G02340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02340 vs. NCBI_GenBank
Match: EWM24176.1 (hypothetical protein Naga_100955g1 [Nannochloropsis gaditana]) HSP 1 Score: 304.7 bits (779), Expect = 6.400e-79 Identity = 216/504 (42.86%), Postives = 268/504 (53.17%), Query Frame = 0 Query: 4 LFFYLGLWAAAAFLRYRTLRQGLLPWSRRRGRYTWSFTGWAIVWECKTSSSSFPFASSLPLHRSTENNNERERDPPYYENGKADKKKSFLLKDNLSIVAFIIGQVLVILFLAWNCCVTLLQSXXXXXXXXXXXXXXSFSDDYGRTHQHEQHRRLSTA----IPSSFSXXXSSYSPFPFSFHIATYLKPLSLLP----XXXXXXXXXXXXXXXXASLLSLLIHEWGHARWAIKEGIGYQAFGVYLALGLLPGAYVLLDPSLLSSLPPLPQLRVICAGIWHNLLLCICLAFLLLTDLASWPVSTTNQGILLLPPPAFLPPSSPLFHLLRPGEILSSLQDTPTPSLSTYYSLLEQQVNLTAHRARALSSLIPNPQMANATITRLLENLLPAL-PFPNPPFLPPIAAVDTAGLLQSETFCTSLNLLSPQHMKGGKEGGKDGR-RLPHCCTFDALTGEEGXXXXXXXXXXXG--ATCFAAFDLLLKQQLFPTPPPSLSTSFPPSSSFVT 496 LF+ L +WA A+ +R R RQ P R GR T S T AIV E K S S + +LPL P + +K++ N S++ F +GQ+LV LFLAWN TLL S S + + RRLSTA XXX P +FH+AT L+PLSLL AS LSL IHEWGHAR A+KEGIGYQA GVY A GL PGAYV+LDP LL +LPPL QLR++ AG+W NLLLC+ LL +L +ST G+L LPPP LPPSSPL L RPG +L+SLQD TPSL + ++ Q+ + RA A + IP+P ANAT+T LL L P P PF I AV+ GLLQ++TFCTSL +P H + ++GR RLP CCTF+ALTG+ G TCFAA+DL + P+ S S+ FP SSFVT Sbjct: 7 LFYCLLVWAVASLIRCRRQRQNASPCVYRYGRCTVSLTSLAIVGEIKASGSRSASSPALPLPSVL----------PLARHQAPRSRKAWCQGQNFSVLVFSVGQILVCLFLAWNLGYTLLHSTFTWPRLGPSISLPSHHSP-NLPAERPRPRRLSTASSXXXXXXXXXXXXXXXPSSTAFHVATRLRPLSLLSPATGHNTLTSSAPSWFILWLASFLSLSIHEWGHARQAVKEGIGYQAIGVYFAFGLFPGAYVILDPFLLRALPPLAQLRILAAGVWQNLLLCLFTGLLLFFNLLPSLLSTPTSGLLFLPPP--LPPSSPLASLFRPGHVLASLQDLSTPSLPAWEEAVQIQIEKISQRASAFRNGIPSPHEANATVTLLLHALPPPTPPSTTSPFSSKIEAVERTGLLQADTFCTSLPPFAPHHFQ------QEGRGRLPTCCTFEALTGQGRDRKRGAGEEEEGRDTTCFAAYDLGVGTSSLPS---SSSSLFPHHSSFVT 488
BLAST of NO17G02340 vs. NCBI_GenBank
Match: XP_006627811.1 (PREDICTED: membrane-bound transcription factor site-2 protease isoform X1 [Lepisosteus oculatus]) HSP 1 Score: 85.5 bits (210), Expect = 6.100e-13 Identity = 55/151 (36.42%), Postives = 89/151 (58.94%), Query Frame = 0 Query: 209 ASLLSLLIHEWGHARWAIKEGIGYQAFGVYLALGLLPGAYVLLDPSLLSSLPPLPQLRVICAGIWHNLLLCI-CLAFLLLTDLASWPVSTTNQGILLLPPPAFLPPSSPLFHLLRPGEILSSLQDTPTPSLSTYYSLLEQQVNLTAHRARA 359 A L+S +IHE+GH AI+E + + FG+++ + + PGA+V L + L + P+ QLR+ CAG+WHN +LC+ LAFLLL L +P T G L+ P S P L G++++ L+D P S+ +++ + + +HRA+A Sbjct: 138 AILISGVIHEFGHGVAAIREQVRFNGFGMFIFI-IYPGAFVDLFTTHLQLISPVQQLRIFCAGVWHNFVLCVAALAFLLLLPLFLFPFYYTGAGALITEVVEDSPASGP--RGLFVGDLVTWLEDCPVRSVDDWHACVRE----ISHRAQA 281
BLAST of NO17G02340 vs. NCBI_GenBank
Match: XP_015196993.1 (PREDICTED: membrane-bound transcription factor site-2 protease isoform X2 [Lepisosteus oculatus]) HSP 1 Score: 85.5 bits (210), Expect = 6.100e-13 Identity = 55/151 (36.42%), Postives = 89/151 (58.94%), Query Frame = 0 Query: 209 ASLLSLLIHEWGHARWAIKEGIGYQAFGVYLALGLLPGAYVLLDPSLLSSLPPLPQLRVICAGIWHNLLLCI-CLAFLLLTDLASWPVSTTNQGILLLPPPAFLPPSSPLFHLLRPGEILSSLQDTPTPSLSTYYSLLEQQVNLTAHRARA 359 A L+S +IHE+GH AI+E + + FG+++ + + PGA+V L + L + P+ QLR+ CAG+WHN +LC+ LAFLLL L +P T G L+ P S P L G++++ L+D P S+ +++ + + +HRA+A Sbjct: 86 AILISGVIHEFGHGVAAIREQVRFNGFGMFIFI-IYPGAFVDLFTTHLQLISPVQQLRIFCAGVWHNFVLCVAALAFLLLLPLFLFPFYYTGAGALITEVVEDSPASGP--RGLFVGDLVTWLEDCPVRSVDDWHACVRE----ISHRAQA 229
BLAST of NO17G02340 vs. NCBI_GenBank
Match: ORX78987.1 (hypothetical protein BCR32DRAFT_294703 [Anaeromyces robustus]) HSP 1 Score: 85.1 bits (209), Expect = 7.900e-13 Identity = 57/160 (35.62%), Postives = 88/160 (55.00%), Query Frame = 0 Query: 209 ASLLSLLIHEWGHARWAIKEGIGYQAFGVYLALGLLPGAYVLLDPSLLSSLPPLPQLRVICAGIWHNLLLCICLAFLLLTDLASWPV--STTNQGILLLPPPAFLPPSSPLFHLLRPGEILSSLQDTPTPSLSTYYSLLEQQVNLTAHRARALSSLIPNP 367 A+ LS +IHE+GHA A+ E I + G + + + PGA+V +D LLS L P QLR+ CAG+WHN+ LCI L ++LL + W + S +N + +L + +SPL+ + G I+ S+ D P P + + ++ +Q SLI NP Sbjct: 249 ATFLSGIIHEFGHAIAALSENISIYSTGAFFYI-VFPGAFVNMDDHLLSLLKPFHQLRIFCAGVWHNVWLCI-LCYILLITMPYWLIGYSQSNNELYVLD----VNKNSPLYGYVHKGSIIHSINDQPIPYGNDGFEIMLRQ------------SLIKNP 390
BLAST of NO17G02340 vs. NCBI_GenBank
Match: XP_002112454.1 (hypothetical protein TRIADDRAFT_24878 [Trichoplax adhaerens] >EDV24564.1 hypothetical protein TRIADDRAFT_24878 [Trichoplax adhaerens]) HSP 1 Score: 83.2 bits (204), Expect = 3.000e-12 Identity = 52/149 (34.90%), Postives = 83/149 (55.70%), Query Frame = 0 Query: 209 ASLLSLLIHEWGHARWAIKEGIGYQAFGVYLALGLLPGAYVLLDPSLLSSLPPLPQLRVICAGIWHNLLLC-ICLAFLLLTDLASWPVSTTNQGILLLPPPAFLPPSSPLFHLLRPGEILSSLQDTPTPSLSTYYSLLE--QQVNLTAH 355 A +S + HE GHA AI+E + FG+++ L + PGAYV L LS + P QL++ CAG WHN++L +C+ + + WP T I +L + SPL+++L G+I++++ + P S+S + S L QQ LT + Sbjct: 144 AIAISGIFHELGHAIAAIRENVKVNGFGLFVML-IYPGAYVDLSSDHLSQISPYRQLKIYCAGAWHNIVLALLCIVLVKNLSIVLWPFYVTGGSIAVLN----VFSGSPLYNVLERGDIITNINECPVQSISLWRSCLSDIQQQPLTGY 287
BLAST of NO17G02340 vs. NCBI_GenBank
Match: XP_016579393.1 (PREDICTED: membrane-bound transcription factor site-2 protease homolog isoform X1 [Capsicum annuum]) HSP 1 Score: 82.8 bits (203), Expect = 3.900e-12 Identity = 50/125 (40.00%), Postives = 74/125 (59.20%), Query Frame = 0 Query: 209 ASLLSLLIHEWGHARWAIKEGIGYQAFGVYLALGLLPGAYVLLDPSLLSSLPPLPQLRVICAGIWHNLLLC-ICLAFLLLTDLASWPVSTTNQGILLLPPPAFLPPSSPLFHLLRPGEILSSLQD 333 +S+LS+ +HE GHA A EGI + V+ A+ L PGA V + LL +L + LR+ CAG+WHN +LC +C LLL L +P ++G ++L + P+SPL L PG+++ SL D Sbjct: 153 SSILSVSVHELGHAVAAASEGIQMEYIAVFFAV-LFPGALVAFNHELLQALSKVSALRIYCAGVWHNAVLCAVCAWALLLQPLILYPFYIHDEGPMVLD----VSPTSPLSGYLSPGDVIISLDD 272
BLAST of NO17G02340 vs. NCBI_GenBank
Match: XP_016579398.1 (PREDICTED: membrane-bound transcription factor site-2 protease homolog isoform X2 [Capsicum annuum]) HSP 1 Score: 82.8 bits (203), Expect = 3.900e-12 Identity = 50/125 (40.00%), Postives = 74/125 (59.20%), Query Frame = 0 Query: 209 ASLLSLLIHEWGHARWAIKEGIGYQAFGVYLALGLLPGAYVLLDPSLLSSLPPLPQLRVICAGIWHNLLLC-ICLAFLLLTDLASWPVSTTNQGILLLPPPAFLPPSSPLFHLLRPGEILSSLQD 333 +S+LS+ +HE GHA A EGI + V+ A+ L PGA V + LL +L + LR+ CAG+WHN +LC +C LLL L +P ++G ++L + P+SPL L PG+++ SL D Sbjct: 152 SSILSVSVHELGHAVAAASEGIQMEYIAVFFAV-LFPGALVAFNHELLQALSKVSALRIYCAGVWHNAVLCAVCAWALLLQPLILYPFYIHDEGPMVLD----VSPTSPLSGYLSPGDVIISLDD 271
BLAST of NO17G02340 vs. NCBI_GenBank
Match: XP_016579401.1 (PREDICTED: membrane-bound transcription factor site-2 protease homolog isoform X3 [Capsicum annuum]) HSP 1 Score: 82.8 bits (203), Expect = 3.900e-12 Identity = 50/125 (40.00%), Postives = 74/125 (59.20%), Query Frame = 0 Query: 209 ASLLSLLIHEWGHARWAIKEGIGYQAFGVYLALGLLPGAYVLLDPSLLSSLPPLPQLRVICAGIWHNLLLC-ICLAFLLLTDLASWPVSTTNQGILLLPPPAFLPPSSPLFHLLRPGEILSSLQD 333 +S+LS+ +HE GHA A EGI + V+ A+ L PGA V + LL +L + LR+ CAG+WHN +LC +C LLL L +P ++G ++L + P+SPL L PG+++ SL D Sbjct: 128 SSILSVSVHELGHAVAAASEGIQMEYIAVFFAV-LFPGALVAFNHELLQALSKVSALRIYCAGVWHNAVLCAVCAWALLLQPLILYPFYIHDEGPMVLD----VSPTSPLSGYLSPGDVIISLDD 247
BLAST of NO17G02340 vs. NCBI_GenBank
Match: XP_016579407.1 (PREDICTED: membrane-bound transcription factor site-2 protease homolog isoform X4 [Capsicum annuum]) HSP 1 Score: 82.8 bits (203), Expect = 3.900e-12 Identity = 50/125 (40.00%), Postives = 74/125 (59.20%), Query Frame = 0 Query: 209 ASLLSLLIHEWGHARWAIKEGIGYQAFGVYLALGLLPGAYVLLDPSLLSSLPPLPQLRVICAGIWHNLLLC-ICLAFLLLTDLASWPVSTTNQGILLLPPPAFLPPSSPLFHLLRPGEILSSLQD 333 +S+LS+ +HE GHA A EGI + V+ A+ L PGA V + LL +L + LR+ CAG+WHN +LC +C LLL L +P ++G ++L + P+SPL L PG+++ SL D Sbjct: 127 SSILSVSVHELGHAVAAASEGIQMEYIAVFFAV-LFPGALVAFNHELLQALSKVSALRIYCAGVWHNAVLCAVCAWALLLQPLILYPFYIHDEGPMVLD----VSPTSPLSGYLSPGDVIISLDD 246
BLAST of NO17G02340 vs. NCBI_GenBank
Match: XP_016579413.1 (PREDICTED: membrane-bound transcription factor site-2 protease homolog isoform X5 [Capsicum annuum]) HSP 1 Score: 82.8 bits (203), Expect = 3.900e-12 Identity = 50/125 (40.00%), Postives = 74/125 (59.20%), Query Frame = 0 Query: 209 ASLLSLLIHEWGHARWAIKEGIGYQAFGVYLALGLLPGAYVLLDPSLLSSLPPLPQLRVICAGIWHNLLLC-ICLAFLLLTDLASWPVSTTNQGILLLPPPAFLPPSSPLFHLLRPGEILSSLQD 333 +S+LS+ +HE GHA A EGI + V+ A+ L PGA V + LL +L + LR+ CAG+WHN +LC +C LLL L +P ++G ++L + P+SPL L PG+++ SL D Sbjct: 126 SSILSVSVHELGHAVAAASEGIQMEYIAVFFAV-LFPGALVAFNHELLQALSKVSALRIYCAGVWHNAVLCAVCAWALLLQPLILYPFYIHDEGPMVLD----VSPTSPLSGYLSPGDVIISLDD 245 The following BLAST results are available for this feature:
BLAST of NO17G02340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02340 ID=NO17G02340|Name=NO17G02340|organism=Nannochloropsis oceanica|type=gene|length=1779bpback to top protein sequence of NO17G02340.1 >NO17G02340.1-protein ID=NO17G02340.1-protein|Name=NO17G02340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=593bpback to top Synonyms
Publications
|