NO17G02230, NO17G02230 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02230 vs. NCBI_GenBank
Match: EWM24183.1 (RNA helicase, DEAD-box type [Nannochloropsis gaditana]) HSP 1 Score: 584.7 bits (1506), Expect = 4.000e-163 Identity = 327/514 (63.62%), Postives = 388/514 (75.49%), Query Frame = 0 Query: 215 MRAFRRRLRIKVTGENIPDCLPSFSLLPSLLSSSFLSXXXSSLVQTLLQNVEASHWKEPTPIQMQALPILLLGRDLLASSPTGTGKTAAFIIPTLLRLGAPISKGRPKHTKEEAAAAGGNRRGPRALFLAPTRELAAQIYREVERLSQGKKFKIGLLSKALAATRGEGGREGGVLGAYDVLVATPMRLVQVVREGGIDLGNVLSVVLDEADKLLELGREGRRDEEGHVLQPDKSFLGQVDEILAACSHPQVQRALFSATLPPLIEDLARSILRDPLSVSIGLYAASLTNNYQGGAAVPDTVTQSLLFVGREEGKLLALRQILREGVLPPVLVFLQTKERARELYHELCYDNFKVEVMHADRSPEQRAELLHKVRTGEVWVLLCTDICSRGLDLRTVNMVINYDLPSSCVAYVHXXXXXXXXXXXXXAVSFWTEGDMLEGKGLRSIANVIKLSGGDVPTWMTALKPTNSKGMGGRRKEGGREGGKGPTFRRERISTGTAWDRERAKRKSKVWGKG 729 MRAFRRRLRIK GEN+PDCLPSFSLLP +SL +TLL+N+E+S WKEPTPIQMQALP+L +GRDLLA++PTG+GKTAAF++PTLLRL E A A R GPRAL LAPTRELA+QI EV+RL+ G+ FK+ ++SKALAAT+ E G+ GV YD+LVATPMRL+Q +REG +DL V +VVLDEADKL ELGREG+++ G L+PDKSFLGQVDEILAAC++P+VQRALFSATLPPLI+DLA S+LRDP+SVS+GL S +NY AAVP++VTQ L+FVGREEGKLLALRQ+L++GVLPP+LVFL+ KERARELYHELCYD+ +V+VMHADRS EQRA LL KVR G VWVLLCTD+C+RGLDLR VN+V+NYDLP SCV YVHXXXXXXXXXXXXX +FWTE DM EG LR+IANVIKLSGG VP+WM LK TAWD E+AKR+ + +G Sbjct: 94 MRAFRRRLRIKARGENVPDCLPSFSLLP---------CPDASLKRTLLRNIESSQWKEPTPIQMQALPVLAMGRDLLATAPTGSGKTAAFVLPTLLRL--------------EKAEAKLLRNGPRALLLAPTRELASQICGEVQRLAAGRAFKVAVVSKALAATKDEAGQ--GVFSGYDLLVATPMRLLQALREGRVDLRRVRAVVLDEADKLFELGREGKKNAAGESLEPDKSFLGQVDEILAACTYPEVQRALFSATLPPLIQDLAGSVLRDPVSVSVGL--PSNRSNYTHAAAVPESVTQELVFVGREEGKLLALRQLLKQGVLPPILVFLENKERARELYHELCYDHLRVDVMHADRSTEQRAALLEKVRAGAVWVLLCTDLCARGLDLRAVNVVVNYDLPPSCVTYVHXXXXXXXXXXXXXXXTFWTERDMEEGGSLRAIANVIKLSGGQVPSWMAGLK--------XXXXXXXXXXXXXXXXXXXXXXXXTAWDVEKAKRRKEGRAQG 572
BLAST of NO17G02230 vs. NCBI_GenBank
Match: CBJ26121.1 (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 406.0 bits (1042), Expect = 2.600e-109 Identity = 238/452 (52.65%), Postives = 315/452 (69.69%), Query Frame = 0 Query: 218 FRRRLRIKVTGENIPDCLPSFSLLPSLLSSSFLSXXXSSLVQTLLQNVEASHWKEPTPIQMQALPILLLGRDLLASSPTGTGKTAAFIIPTLLRLGAPISKGRPKHTKEEAAAAGGNRRGPRALFLAPTRELAAQIYREVERLSQGKKFKIGLLSKALA--ATRGEGGREGGVLGAYDVLVATPMRLVQVVREGGIDLGNVLSVVLDEADKLLELGREGRRDEEGHVLQPDKSFLGQVDEILAACSHPQVQRALFSATLPPLIEDLARSILRDPLSVSIGLYAASLTNNYQGGAAVPDTVTQSLLFVGREEGKLLALRQILREGVLPPVLVFLQTKERARELYHELCYDNFKVEVMHADRSPEQRAELLHKVRTGEVWVLLCTDICSRGLDLRTVNMVINYDLPSSCVAYVHXXXXXXXXXXXXXAVSFWTEGDMLEGKGLRSIANVIKLSG 668 FRRR+ IKV GE + D + SFS +PS +S + LL NVE S WKEPTP+QMQA+PIL+ GRDLLA++PTG+GKTAAF++P +LRLG + + P+ + G R + LAPTRELAAQI+R+V RLS+G++ ++ LL+KA A A G L YD++V+TPMRLV +VRE + L +V VVLDEADKL + G DK+F+GQVDE+LAACSH QVQRALFSAT+ +++L+ S+LRDP+ +++G T N GAA + Q L++VGREEGKLLA+RQ+++EG+ PPVLVFLQ+K+RA+ L+HEL YD +VMHA R+ +QR ++ + RTGE+WVL+CTD+ +RG+D + VNMVINYD P S V+Y+HXXXXXXXXXXXX AV+ +TE DM LRSIANVI+LSG Sbjct: 40 FRRRMGIKVKGEEVADPMESFSEMPSATTSE----DAGQTRRVLLHNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLG--VQRADPQAS------------GVRGILLAPTRELAAQIHRDVVRLSRGRRLRVCLLTKAGATKAAAATGMDSRNALSGYDIVVSTPMRLVALVRERAVCLASVEMVVLDEADKLFDAGAASGGS--------DKAFIGQVDEVLAACSHQQVQRALFSATVGQQVKELSESVLRDPIFLTVG------TQN--AGAA---DIDQRLVYVGREEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGINTDVMHASRTQDQRDNIIQRFRTGEIWVLICTDLVARGIDFKGVNMVINYDFPQSAVSYIHXXXXXXXXXXXXVAVTLFTESDM---NSLRSIANVIRLSG 451
BLAST of NO17G02230 vs. NCBI_GenBank
Match: GAY00513.1 (Hypothetical protein PINS_008339, partial [Pythium insidiosum]) HSP 1 Score: 393.7 bits (1010), Expect = 1.300e-105 Identity = 229/507 (45.17%), Postives = 322/507 (63.51%), Query Frame = 0 Query: 215 MRAFRRRLRIKVTGENIPDCLPSFSLLPSLLSSSFLSXXXSSLVQTLLQNVEASHWKEPTPIQMQALPILLLGRDLLASSPTGTGKTAAFIIPTLLRLGAPISKGRPKHTKEEAAAAGGNRRGPRALFLAPTRELAAQIYREVERLSQGKKFKIGLLSKALAATRGEGGREGGVLGAYDVLVATPMRLVQVVREGGIDLGNVLSVVLDEADKLLELGREGRRDEEGHVLQPDKSFLGQVDEILAACSHPQVQRALFSATLPPLIEDLARSILRDPLSVSIGLYAASLTNNYQGGAAVPDTVTQSLLFVGREEGKLLALRQILREGVLPPVLVFLQTKERARELYHELCYDNFKVEVMHADRSPEQRAELLHKVRTGEVWVLLCTDICSRGLDLRTVNMVINYDLPSSCVAYVHXXXXXXXXXXXXXAVSFWTEGDMLEGKGLRSIANVIKLSGGDVPTWMTALKPTNSKGMGGRRKEGGREGGKGPTFRRERISTGTAWDRERAKRK 722 +R FR+++ I+V G ++P + +F + L+ + LL N+EAS +KEPTPIQMQA+P LLLGRD+LA++PTG+GKTAAF IP L LGAP ++G RA+ L+PTRELA QI+ E +RLS G+KF I LLSKA AAT + + +D+++ATP+RLV +V+E +DL V + LDEAD+L ++G F+ Q+DEILAAC+HP+VQRA+FSAT+ +E++A+S+LRDP+ +SIG+ A GA+ ++ Q L+FVG+EEGKL+A++Q+++EG+ P L+F+Q KERA ELYHEL YD V +HADR+ EQR E + + R G+VWVL+CTD+ SRG+D + VNMVINYD P V+Y+H AV+F+TE DM LR+IANV+KLSG DVP WM LK K +RK + K P +R+RIST + +D ++A ++ Sbjct: 174 VRLFRKQMNIRVEGTSVPAPIATFDAMK-------LNATQLKMRSVLLHNIEASEYKEPTPIQMQAIPSLLLGRDVLATAPTGSGKTAAFAIPMLANLGAP------------------QQQGIRAVVLSPTRELAVQIFHEFQRLSAGRKFHIVLLSKATAATMISSIKNNCTVN-HDLVIATPLRLVHLVQEAKLDLSMVEMICLDEADRLFDMG-----------------FVEQIDEILAACTHPRVQRAMFSATMLQGVEEMAQSVLRDPVKISIGVKNA--------GAS---SIEQKLVFVGKEEGKLVAMKQLIQEGLRLPALLFVQNKERANELYHELLYDGINVGAVHADRTKEQRDETIRQFRAGQVWVLICTDLMSRGIDFKAVNMVINYDFPQDAVSYIHRIGRTGRGGRKGLAVTFFTEDDMAY---LRTIANVMKLSGCDVPDWMLTLK----KASATKRK----QLLKAPP-QRKRISTVSGYDLQKAHKR 614
BLAST of NO17G02230 vs. NCBI_GenBank
Match: XP_005855760.1 (putative dead box rna helicase [Nannochloropsis gaditana CCMP526] >EKU20601.1 putative dead box rna helicase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 386.7 bits (992), Expect = 1.600e-103 Identity = 204/307 (66.45%), Postives = 247/307 (80.46%), Query Frame = 0 Query: 286 LGRDLLASSPTGTGKTAAFIIPTLLRLGAPISKGRPKHTKEEAAAAGGNRRGPRALFLAPTRELAAQIYREVERLSQGKKFKIGLLSKALAATRGEGGREGGVLGAYDVLVATPMRLVQVVREGGIDLGNVLSVVLDEADKLLELGREGRRDEEGHVLQPDKSFLGQVDEILAACSHPQVQRALFSATLPPLIEDLARSILRDPLSVSIGLYAASLTNNYQGGAAVPDTVTQSLLFVGREEGKLLALRQILREGVLPPVLVFLQTKERARELYHELCYDNFKVEVMHADRSPEQRAELLHKVRTGEV 593 +GRDLLA++PTG+GKTAAF++PTLLRL E A A R GPRAL LAPTRELA+QI EV+RL+ G+ FK+ ++SKALAAT+ E G+ GV YD+LVATPMRL+Q +REG +DL V +VVLDEADKL ELGREG+++ G L+PDKSFLGQVDEILAAC++P+VQRALFSATLPPLI+DLA S+LRDP+SVS+GL S +NY AAVP++VTQ L+FVGREEGKLLALRQ+L++GVLPP+LVFL+ KERARELYHELCYD+ +V+VMHADRS EQRA LL KVR G V Sbjct: 1 MGRDLLATAPTGSGKTAAFVLPTLLRL--------------EKAEARLLRNGPRALLLAPTRELASQICGEVQRLAAGRAFKVAVVSKALAATKDEAGQ--GVFSGYDLLVATPMRLLQALREGRVDLRRVRAVVLDEADKLFELGREGKKNAAGESLEPDKSFLGQVDEILAACTYPEVQRALFSATLPPLIQDLAGSVLRDPVSVSVGL--PSNRSNYTHAAAVPESVTQELVFVGREEGKLLALRQLLKQGVLPPILVFLENKERARELYHELCYDHLRVDVMHADRSTEQRAALLEKVRAGAV 289
BLAST of NO17G02230 vs. NCBI_GenBank
Match: ETI36081.1 (hypothetical protein F443_17720 [Phytophthora parasitica P1569] >ETL82973.1 hypothetical protein L917_16977 [Phytophthora parasitica]) HSP 1 Score: 379.8 bits (974), Expect = 2.000e-101 Identity = 247/518 (47.68%), Postives = 334/518 (64.48%), Query Frame = 0 Query: 215 MRAFRRRLRIKVTGENIPDCLPSFSLLPSLLSSSFLSXXXSSLVQTLLQNVEASHWKEPTPIQMQALPILLLGRDLLASSPTGTGKTAAFIIPTLLRLGAPISKGRPKHTKEEAAAAGGNRRGPRALFLAPTRELAAQIYREVERLSQGKKFKIGLLSKALAATRGEGGREGGVLGAYDVLVATPMRLVQVVREGGIDLGNVLSVVLDEADKLLELGREGRRDEEGHVLQPDKSFLGQVDEILAACSHPQVQRALFSATLPPLIEDLARSILRDPLSVSIGLYAASLTNNYQGGAAVPDTVTQSLLFVGREEGKLLALRQILREGVLPPVLVFLQTKERARELYHELCYDNFKVEVMHADRSPEQRAELLHKVRTGEVWVLLCTDICSRGLDLRTVNMVINYDLPSSCVAYVHXXXXXXXXXXXXXAVSFWTEGDMLEGKGLRSIANVIKLSGGDVPTWMTALKPTNSKGMGGRRKEGGREGGKGPTFRRERISTGTAWDRERAKRKSKVWGKGKHIK 733 ++ RR+L I+V+G ++P + SF+ + S+S + + LLQN+E S +KEPT +QMQA+P LL RD+LA++PTG+GKTAAF IP L L AA G G R++ LAPTR+LA QI E RL+ GKK I LLSKA AAT + + +DVL+ATP+RLV +++E +DL V V LDEAD+LLELG F+ QVDEI AAC+HP+VQRA+FSAT+ +E+LA+++LRDP+ V++G T N A T+ Q L+FVG+EEGKL+A++Q+L+EG+ P L+F+Q KERA ELYHEL YD + +HADR+ EQR +++ + RTGEVWVL+CTD+ SRG+D + VNMVINYD P S V+Y XXXXXXXXXXXXXAV+F+TE DM+ LR+IANV+K+SG +VP WM +LK K +RKE + PT R RI+T + +D ++A R K + KH K Sbjct: 218 VQMLRRQLGIRVSGVSVPAPITSFADMRLDSSAS-----AQQMKRLLLQNIERSEYKEPTSVQMQAIPSFLLRRDVLATAPTGSGKTAAFAIPILANL----------------AAGSGTSSGIRSIVLAPTRDLAVQIRAEFTRLAAGKKLHITLLSKATAATIASQTKSKLAVN-HDVLIATPLRLVHLIQESKVDLSTVEMVCLDEADRLLELG-----------------FVEQVDEIFAACTHPRVQRAMFSATMLEGVEELAQTVLRDPVKVAVG------TKN-----AGASTIDQKLVFVGKEEGKLVAMKQLLQEGLQLPALLFVQNKERANELYHELLYDGVNIGAVHADRTKEQRDDVIRRFRTGEVWVLICTDLMSRGMDFKAVNMVINYDFPQSAVSYXXXXXXXXXXXXXXXAVTFFTEDDMVY---LRTIANVMKISGCEVPDWMLSLK----KASVSKRKELLK---APPT--RHRINTVSGYDLQKANR-LKQMKQAKHKK 672
BLAST of NO17G02230 vs. NCBI_GenBank
Match: XP_008896209.1 (hypothetical protein PPTG_04135 [Phytophthora parasitica INRA-310] >ETN18561.1 hypothetical protein PPTG_04135 [Phytophthora parasitica INRA-310]) HSP 1 Score: 379.8 bits (974), Expect = 2.000e-101 Identity = 243/506 (48.02%), Postives = 329/506 (65.02%), Query Frame = 0 Query: 215 MRAFRRRLRIKVTGENIPDCLPSFSLLPSLLSSSFLSXXXSSLVQTLLQNVEASHWKEPTPIQMQALPILLLGRDLLASSPTGTGKTAAFIIPTLLRLGAPISKGRPKHTKEEAAAAGGNRRGPRALFLAPTRELAAQIYREVERLSQGKKFKIGLLSKALAATRGEGGREGGVLGAYDVLVATPMRLVQVVREGGIDLGNVLSVVLDEADKLLELGREGRRDEEGHVLQPDKSFLGQVDEILAACSHPQVQRALFSATLPPLIEDLARSILRDPLSVSIGLYAASLTNNYQGGAAVPDTVTQSLLFVGREEGKLLALRQILREGVLPPVLVFLQTKERARELYHELCYDNFKVEVMHADRSPEQRAELLHKVRTGEVWVLLCTDICSRGLDLRTVNMVINYDLPSSCVAYVHXXXXXXXXXXXXXAVSFWTEGDMLEGKGLRSIANVIKLSGGDVPTWMTALKPTNSKGMGGRRKEGGREGGKGPTFRRERISTGTAWDRERAKR 721 ++ RR+L I+V+G ++P + SF+ + S+S + + LLQN+E S +KEPT +QMQA+P LL RD+LA++PTG+GKTAAF IP L L AA G G R++ LAPTR+LA QI E RL+ GKK I LLSKA AAT + + +DVL+ATP+RLV +++E +DL V V LDEAD+LLELG F+ QVDEI AAC+HP+VQRA+FSAT+ +E+LA+++LRDP+ V++G T N A T+ Q L+FVG+EEGKL+A++Q+L+EG+ P L+F+Q KERA ELYHEL YD + +HADR+ EQR +++ + RTGEVWVL+CTD+ SRG+D + VNMVINYD P S V+Y XXXXXXXXXXXXXAV+F+TE DM+ LR+IANV+K+SG +VP WM +LK K +RKE + PT R RI+T + +D ++A R Sbjct: 218 VQMLRRQLGIRVSGVSVPAPITSFADMRLDSSAS-----AQQMKRLLLQNIERSEYKEPTSVQMQAIPSFLLRRDVLATAPTGSGKTAAFAIPILANL----------------AAGSGTSSGIRSIVLAPTRDLAVQIRAEFTRLAAGKKLHITLLSKATAATIASQTKSKLAVN-HDVLIATPLRLVHLIQESKVDLSTVEMVCLDEADRLLELG-----------------FVEQVDEIFAACTHPRVQRAMFSATMLEGVEELAQTVLRDPVKVAVG------TKN-----AGASTIDQKLVFVGKEEGKLVAMKQLLQEGLQLPALLFVQNKERANELYHELLYDGVNIGAVHADRTKEQRDDVIRRFRTGEVWVLICTDLMSRGMDFKAVNMVINYDFPQSAVSYXXXXXXXXXXXXXXXAVTFFTEDDMVY---LRTIANVMKISGCEVPDWMLSLK----KASVSKRKELLK---APPT--RHRINTVSGYDLQKANR 661
BLAST of NO17G02230 vs. NCBI_GenBank
Match: ETP34012.1 (hypothetical protein F442_17576 [Phytophthora parasitica P10297]) HSP 1 Score: 379.8 bits (974), Expect = 2.000e-101 Identity = 243/506 (48.02%), Postives = 329/506 (65.02%), Query Frame = 0 Query: 215 MRAFRRRLRIKVTGENIPDCLPSFSLLPSLLSSSFLSXXXSSLVQTLLQNVEASHWKEPTPIQMQALPILLLGRDLLASSPTGTGKTAAFIIPTLLRLGAPISKGRPKHTKEEAAAAGGNRRGPRALFLAPTRELAAQIYREVERLSQGKKFKIGLLSKALAATRGEGGREGGVLGAYDVLVATPMRLVQVVREGGIDLGNVLSVVLDEADKLLELGREGRRDEEGHVLQPDKSFLGQVDEILAACSHPQVQRALFSATLPPLIEDLARSILRDPLSVSIGLYAASLTNNYQGGAAVPDTVTQSLLFVGREEGKLLALRQILREGVLPPVLVFLQTKERARELYHELCYDNFKVEVMHADRSPEQRAELLHKVRTGEVWVLLCTDICSRGLDLRTVNMVINYDLPSSCVAYVHXXXXXXXXXXXXXAVSFWTEGDMLEGKGLRSIANVIKLSGGDVPTWMTALKPTNSKGMGGRRKEGGREGGKGPTFRRERISTGTAWDRERAKR 721 ++ RR+L I+V+G ++P + SF+ + S+S + + LLQN+E S +KEPT +QMQA+P LL RD+LA++PTG+GKTAAF IP L L AA G G R++ LAPTR+LA QI E RL+ GKK I LLSKA AAT + + +DVL+ATP+RLV +++E +DL V V LDEAD+LLELG F+ QVDEI AAC+HP+VQRA+FSAT+ +E+LA+++LRDP+ V++G T N A T+ Q L+FVG+EEGKL+A++Q+L+EG+ P L+F+Q KERA ELYHEL YD + +HADR+ EQR +++ + RTGEVWVL+CTD+ SRG+D + VNMVINYD P S V+Y XXXXXXXXXXXXXAV+F+TE DM+ LR+IANV+K+SG +VP WM +LK K +RKE + PT R RI+T + +D ++A R Sbjct: 218 VQMLRRQLGIRVSGVSVPAPITSFADMRLDSSAS-----AQQMKRLLLQNIERSEYKEPTSVQMQAIPSFLLRRDVLATAPTGSGKTAAFAIPILANL----------------AAGSGTSSGIRSIVLAPTRDLAVQIRAEFTRLAAGKKLHITLLSKATAATIASQTKSKLAVN-HDVLIATPLRLVHLIQESKVDLSTVEMVCLDEADRLLELG-----------------FVEQVDEIFAACTHPRVQRAMFSATMLEGVEELAQTVLRDPVKVAVG------TKN-----AGASTIDQKLVFVGKEEGKLVAMKQLLQEGLQLPALLFVQNKERANELYHELLYDGVNIGAVHADRTKEQRDDVIRRFRTGEVWVLICTDLMSRGMDFKAVNMVINYDFPQSAVSYXXXXXXXXXXXXXXXAVTFFTEDDMVY---LRTIANVMKISGCEVPDWMLSLK----KASVSKRKELLK---APPT--RHRINTVSGYDLQKANR 661
BLAST of NO17G02230 vs. NCBI_GenBank
Match: KUF73085.1 (ATP-dependent RNA helicase ddx52 [Phytophthora nicotianae]) HSP 1 Score: 379.8 bits (974), Expect = 2.000e-101 Identity = 243/506 (48.02%), Postives = 329/506 (65.02%), Query Frame = 0 Query: 215 MRAFRRRLRIKVTGENIPDCLPSFSLLPSLLSSSFLSXXXSSLVQTLLQNVEASHWKEPTPIQMQALPILLLGRDLLASSPTGTGKTAAFIIPTLLRLGAPISKGRPKHTKEEAAAAGGNRRGPRALFLAPTRELAAQIYREVERLSQGKKFKIGLLSKALAATRGEGGREGGVLGAYDVLVATPMRLVQVVREGGIDLGNVLSVVLDEADKLLELGREGRRDEEGHVLQPDKSFLGQVDEILAACSHPQVQRALFSATLPPLIEDLARSILRDPLSVSIGLYAASLTNNYQGGAAVPDTVTQSLLFVGREEGKLLALRQILREGVLPPVLVFLQTKERARELYHELCYDNFKVEVMHADRSPEQRAELLHKVRTGEVWVLLCTDICSRGLDLRTVNMVINYDLPSSCVAYVHXXXXXXXXXXXXXAVSFWTEGDMLEGKGLRSIANVIKLSGGDVPTWMTALKPTNSKGMGGRRKEGGREGGKGPTFRRERISTGTAWDRERAKR 721 ++ RR+L I+V+G ++P + SF+ + S+S + + LLQN+E S +KEPT +QMQA+P LL RD+LA++PTG+GKTAAF IP L L AA G G R++ LAPTR+LA QI E RL+ GKK I LLSKA AAT + + +DVL+ATP+RLV +++E +DL V V LDEAD+LLELG F+ QVDEI AAC+HP+VQRA+FSAT+ +E+LA+++LRDP+ V++G T N A T+ Q L+FVG+EEGKL+A++Q+L+EG+ P L+F+Q KERA ELYHEL YD + +HADR+ EQR +++ + RTGEVWVL+CTD+ SRG+D + VNMVINYD P S V+Y XXXXXXXXXXXXXAV+F+TE DM+ LR+IANV+K+SG +VP WM +LK K +RKE + PT R RI+T + +D ++A R Sbjct: 515 VQMLRRQLGIRVSGVSVPAPITSFADMRLDSSAS-----AQQMKRLLLQNIERSEYKEPTSVQMQAIPSFLLRRDVLATAPTGSGKTAAFAIPILANL----------------AAGSGTSSGIRSIVLAPTRDLAVQIRAEFTRLAAGKKLHITLLSKATAATIASQTKSKLAVN-HDVLIATPLRLVHLIQESKVDLSTVEMVCLDEADRLLELG-----------------FVEQVDEIFAACTHPRVQRAMFSATMLEGVEELAQTVLRDPVKVAVG------TKN-----AGASTIDQKLVFVGKEEGKLVAMKQLLQEGLQLPALLFVQNKERANELYHELLYDGVNIGAVHADRTKEQRDDVIRRFRTGEVWVLICTDLMSRGMDFKAVNMVINYDFPQSAVSYXXXXXXXXXXXXXXXAVTFFTEDDMVY---LRTIANVMKISGCEVPDWMLSLK----KASVSKRKELLK---APPT--RHRINTVSGYDLQKANR 958
BLAST of NO17G02230 vs. NCBI_GenBank
Match: XP_002905243.1 (DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4] >EEY53625.1 DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 379.4 bits (973), Expect = 2.600e-101 Identity = 243/506 (48.02%), Postives = 328/506 (64.82%), Query Frame = 0 Query: 215 MRAFRRRLRIKVTGENIPDCLPSFSLLPSLLSSSFLSXXXSSLVQTLLQNVEASHWKEPTPIQMQALPILLLGRDLLASSPTGTGKTAAFIIPTLLRLGAPISKGRPKHTKEEAAAAGGNRRGPRALFLAPTRELAAQIYREVERLSQGKKFKIGLLSKALAATRGEGGREGGVLGAYDVLVATPMRLVQVVREGGIDLGNVLSVVLDEADKLLELGREGRRDEEGHVLQPDKSFLGQVDEILAACSHPQVQRALFSATLPPLIEDLARSILRDPLSVSIGLYAASLTNNYQGGAAVPDTVTQSLLFVGREEGKLLALRQILREGVLPPVLVFLQTKERARELYHELCYDNFKVEVMHADRSPEQRAELLHKVRTGEVWVLLCTDICSRGLDLRTVNMVINYDLPSSCVAYVHXXXXXXXXXXXXXAVSFWTEGDMLEGKGLRSIANVIKLSGGDVPTWMTALKPTNSKGMGGRRKEGGREGGKGPTFRRERISTGTAWDRERAKR 721 ++ RR+L I+V+G ++P + SF+ + S+S + + LLQN+E S +KEPT +QMQA+P LLL RD+LA++PTG+GKTAAF IP L L AA G G R++ LAPTR+LA QI E RL+ GKK I LLSKA AAT + + +DVL+ATP+RLV +++E +DL V V LDEAD+LLELG F+ QVDEI AAC+HP+VQRA+FSAT+ +E+LA+++LRDP+ V++G T N A T+ Q L+FVG+EEGKL+A++Q+L++G+ P L+F+Q KERA ELYHEL YD + +HADR+ EQR +++ + RTGEVWVL+CTD+ SRG+D + VNMVINYD P S V+Y XXXXXXXXXXXXXAV+ +TE DM+ LR+IANV+K+SG +VP WM +LK K +RK E K P R RI+T + +D +RA R Sbjct: 218 VQMLRRQLGIRVSGVSVPAPITSFADMRLDSSAS-----AQQMKRLLLQNIERSEYKEPTSVQMQAIPSLLLRRDVLATAPTGSGKTAAFAIPILANL----------------AAGSGTSSGIRSIVLAPTRDLAVQIRAEFTRLAAGKKLHITLLSKATAATIASQTKSKLAVN-HDVLIATPLRLVHLIQESKVDLSTVEMVCLDEADRLLELG-----------------FVEQVDEIFAACTHPKVQRAMFSATMLEGVEELAQTVLRDPVKVAVG------TKN-----AGASTIDQKLVFVGKEEGKLVAMKQLLQQGLQLPALLFVQNKERANELYHELLYDGVNIGAVHADRTKEQRDDVIRRFRTGEVWVLICTDLMSRGMDFKAVNMVINYDFPQSAVSYXXXXXXXXXXXXXXXAVTLFTEDDMVY---LRTIANVMKISGCEVPDWMLSLK----KASVSKRK----ELLKAPPM-RHRINTVSGYDLQRANR 661
BLAST of NO17G02230 vs. NCBI_GenBank
Match: ETK76304.1 (hypothetical protein L915_17254 [Phytophthora parasitica]) HSP 1 Score: 378.6 bits (971), Expect = 4.400e-101 Identity = 242/506 (47.83%), Postives = 329/506 (65.02%), Query Frame = 0 Query: 215 MRAFRRRLRIKVTGENIPDCLPSFSLLPSLLSSSFLSXXXSSLVQTLLQNVEASHWKEPTPIQMQALPILLLGRDLLASSPTGTGKTAAFIIPTLLRLGAPISKGRPKHTKEEAAAAGGNRRGPRALFLAPTRELAAQIYREVERLSQGKKFKIGLLSKALAATRGEGGREGGVLGAYDVLVATPMRLVQVVREGGIDLGNVLSVVLDEADKLLELGREGRRDEEGHVLQPDKSFLGQVDEILAACSHPQVQRALFSATLPPLIEDLARSILRDPLSVSIGLYAASLTNNYQGGAAVPDTVTQSLLFVGREEGKLLALRQILREGVLPPVLVFLQTKERARELYHELCYDNFKVEVMHADRSPEQRAELLHKVRTGEVWVLLCTDICSRGLDLRTVNMVINYDLPSSCVAYVHXXXXXXXXXXXXXAVSFWTEGDMLEGKGLRSIANVIKLSGGDVPTWMTALKPTNSKGMGGRRKEGGREGGKGPTFRRERISTGTAWDRERAKR 721 ++ RR+L I+V+G ++P + SF+ + S+S + + LLQN+E S +KEPT +QMQA+P LL RD+LA++PTG+GKTAAF IP L L AA G G R++ LAPTR+LA QI E RL+ GKK I LLSKA AAT + + +DVL+ATP+RLV +++E +DL V V LDEAD+LLELG F+ QVDEI AAC+HP+VQRA+FSAT+ +E+LA+++LRDP+ V++G T N A T+ Q L+FVG+EEGKL+A++Q+L+EG+ P L+F+Q KERA ELYHEL YD + +HADR+ EQR +++ + RTGEVWVL+CTD+ SRG+D + VNMVINYD P S V+Y XXXXXXXXXXXXXAV+F+TE DM+ LR+IANV+K+SG +VP WM +L+ K +RKE + PT R RI+T + +D ++A R Sbjct: 218 VQMLRRQLGIRVSGVSVPAPITSFADMRLDSSAS-----AQQMKRLLLQNIERSEYKEPTSVQMQAIPSFLLRRDVLATAPTGSGKTAAFAIPILANL----------------AAGSGTSSGIRSIVLAPTRDLAVQIRAEFTRLAAGKKLHITLLSKATAATIASQTKSKLAVN-HDVLIATPLRLVHLIQESKVDLSTVEMVCLDEADRLLELG-----------------FVEQVDEIFAACTHPRVQRAMFSATMLEGVEELAQTVLRDPVKVAVG------TKN-----AGASTIDQKLVFVGKEEGKLVAMKQLLQEGLQLPALLFVQNKERANELYHELLYDGVNIGAVHADRTKEQRDDVIRRFRTGEVWVLICTDLMSRGMDFKAVNMVINYDFPQSAVSYXXXXXXXXXXXXXXXAVTFFTEDDMVY---LRTIANVMKISGCEVPDWMLSLR----KASVSKRKELLK---APPT--RHRINTVSGYDLQKANR 661 The following BLAST results are available for this feature:
BLAST of NO17G02230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02230 ID=NO17G02230|Name=NO17G02230|organism=Nannochloropsis oceanica|type=gene|length=2253bpback to top protein sequence of NO17G02230.1 >NO17G02230.1-protein ID=NO17G02230.1-protein|Name=NO17G02230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=751bpback to top Synonyms
Publications
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