NO17G02200, NO17G02200 (gene) Nannochloropsis oceanica

Overview
NameNO17G02200
Unique NameNO17G02200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3093
Alignment locationchr17:637867..640959 -

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Properties
Property NameValue
DescriptionSeptum site-determining protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:637867..640959 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0051726regulation of cell cycle
GO:1901891regulation of cell septum assembly
GO:0000902cell morphogenesis
GO:1901891regulation of cell septum assembly
GO:0051726regulation of cell cycle
GO:0000902cell morphogenesis
Vocabulary: INTERPRO
TermDefinition
IPR036145MinC_C_sf
IPR013033MinC
IPR005526Septum_form_inhib_MinC_C
Homology
[Close]
BLAST of NO17G02200 vs. NCBI_GenBank
Match: EWM24189.1 (septum site-determining protein [Nannochloropsis gaditana])

HSP 1 Score: 291.2 bits (744), Expect = 5.100e-75
Identity = 200/346 (57.80%), Postives = 223/346 (64.45%), Query Frame = 0 
Query:   43 KPHAHLRQYLDAWMGSTGTLNTTR-STTTGPVASHQXXXXXXSSAGHPITLTVAGKSYLVPTLRLPRGVGPLDLQAGLKATTSLSAGYFKCAPIVVDLGEWMTSQPLPRGGVRTEAAGKGGEVLDAVLLGEFVETLREAGLQPVGIANATATDIQAAAMALGLPCFMGRHGGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKPTMAAAHLPSTSPRSEXXXXXXXXXXPNAATISSQPLXXXXXXAAPILPTKVIQGSVRTGQQVVAEGASLVILGHVNSGAEVSADGDIHIYGRLSGRALAGLGGDGKSKIFAGKFNAELVAIADVFTTCDFGEEMEEGR 388
            KP  HLRQYLDAWMGSTGT++T R      P AS             PI +TVAGKSYLVPTLRLPRG+ P +L+AGL+ATTSLSAGYF+ AP+VVDLGEW+ SQPLPRGGVRT +AG GGEVLD  LL  FV  ++EAGL PVGIANATATD++AAA+ LGLPCFM RH          XXXXXXXXXXXXXX                             XXXXXXXXXX           XXXXXX        V+QGSVRTGQQVVAEG SL               GDIHIYG+L+GRALAGL GD ++ IF G+FNAELVAI +VFTTCD GE    GR
Sbjct:   48 KPQVHLRQYLDAWMGSTGTVSTPRHQNQESPAASRDAQQPFSPPHAPPIAMTVAGKSYLVPTLRLPRGLSPSELKAGLRATTSLSAGYFQSAPMVVDLGEWLISQPLPRGGVRTASAGVGGEVLDGTLLATFVAAMKEAGLHPVGIANATATDVRAAALELGLPCFMARHA--PPSPSTPXXXXXXXXXXXXXXPQRRTEKEGTRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVVQGSVRTGQQVVAEGTSLXXXXXXXXXXXXXXXGDIHIYGKLTGRALAGLSGDVRANIFVGRFNAELVAIGEVFTTCDVGEGGGRGR 391
[Close]
BLAST of NO17G02200 vs. NCBI_GenBank
Match: OQR83782.1 (hypothetical protein ACHHYP_14282 [Achlya hypogyna])

HSP 1 Score: 122.9 bits (307), Expect = 2.400e-24
Identity = 104/326 (31.90%), Postives = 150/326 (46.01%), Query Frame = 0 
Query:   92 LTVAGKSYLVPTLRLPRGVGPLDLQAGLKATTSLSAGYFKC-APIVVDLGEWMTSQPLPRGGVRTEAAGKGGEVLDAVLLGEFVETLREAGLQPVGIANATATDIQAAAMA-LGLPCFMGR----HGGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKPTMAAAHLPSTSPRSEXXXXXXXXXXPNAATISSQPLXXXXXXAAPILPTKVIQGSVRTGQQVVAEGASLVILGHVNSGAEVSADGDIHIYGRLSGRALAGLGGDGKSKIFAGKFNAELVAIADVFTTCDFGEEMEEGREGVVLGAPTSVSLNERGGSLVFHS 412
            + V G +YL+PTLRL  G+   D +  ++     S   +    P+V+DLG  ++S   P               + A  L   +  LR   L P+GI NA + DI+A A   L +P  +G      G                                 A +    ++ +P+T   S                               ++   +++GSVRTGQQV A+   L+++G VNSGAEV ADGDIH+YG L GRALAG+GG+ ++K++A KF+AEL++IAD FTTCD  E  E G   +V   PT V L +  G+L F S
Sbjct:   26 IQVLGGAYLIPTLRL-NGLTRTDGEYDMRRLVEQSRMNWNLRGPVVLDLGS-VSSNGSPH-----------NTPIRASELRSLIYALRGENLHPIGITNA-SEDIKAMAWKNLQVPSIIGTRMDDEGEGEMTRVAMNQLMEDAIGNVEAAQAIIDERLDEAPQSVSESSTVPATKEPS-------------------------------VMSMMLVEGSVRTGQQVYAKEQGLIVMGSVNSGAEVLADGDIHVYGTLKGRALAGIGGNVRAKVYAHKFDAELISIADTFTTCDALEAREVGH--IVSDKPTVVWLED--GALQFKS 302
[Close]
BLAST of NO17G02200 vs. NCBI_GenBank
Match: XP_009537632.1 (hypothetical protein PHYSODRAFT_550682 [Phytophthora sojae] >EGZ06868.1 hypothetical protein PHYSODRAFT_550682 [Phytophthora sojae])

HSP 1 Score: 122.5 bits (306), Expect = 3.100e-24
Identity = 103/317 (32.49%), Postives = 147/317 (46.37%), Query Frame = 0 
Query:   91 TLTVAGKSYLVPTLRLPRGVGPLDLQAGLKATTSLSAGYF-----KCAPIVVDLGEWMTSQPLPRGGVRTEAAGKGGEVLDAVLLGEFVETLREAGLQPVGIANATATDIQAAAMALGLPCFMGRHGGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKPTMAAAHLPSTSPRSEXXXXXXXXXXPNAATISSQPLXXXXXXAAPILPTKVIQGSVRTGQQVVAEGASLVILGHVNSGAEVSADGDIHIYGRLSGRALAGLGGDGKSKIFAGKFNAELVAIADVFTTCDFGEEMEEGREGVVLGAPTSVSLNE 403
            TL + G+SYL+PTL LP+G G        KA  +  + +F     K  P+V+DL      Q +   G     + K  E+ + +L       L+EAG  PVGI NA + D++ AA AL LP F+G                                             HL                     A  +++P           LP  V+  SVR+GQQ+ A+  SLV+LG+V+SGAEV AD D+ + G L GRALAG+GG+ +++I    F+AEL++IA  FTTCD  E+ E G   + L  PT++SL +
Sbjct:   40 TLELEGRSYLLPTLTLPKGSG--------KAKDAKDSQFFQTRANKPTPVVLDL------QQVSSDGSPHSQSIKKHELRNEIL------RLQEAGYMPVGITNA-SEDVKKAAAALSLPYFIG------------------------------------------TRLHLEQ-----------------QKAGTATEP-----------LPPMVVTHSVRSGQQIFAQNRSLVVLGNVSSGAEVMADEDVLVLGALKGRALAGIGGNARARIVCQSFDAELISIAHCFTTCDELEQDETG--SLQLHKPTAISLQD 263
[Close]
BLAST of NO17G02200 vs. NCBI_GenBank
Match: XP_012198959.1 (hypothetical protein SPRG_05060 [Saprolegnia parasitica CBS 223.65] >KDO30349.1 hypothetical protein SPRG_05060 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 120.6 bits (301), Expect = 1.200e-23
Identity = 110/339 (32.45%), Postives = 149/339 (43.95%), Query Frame = 0 
Query:   84 SSAGHPITLT---VAGKSYLVPTLRLPRGV---GPLDLQAGLKATTSLSAGYFKCAPIVVDLGEWMTSQPLPRGGVRTEAAGKGGEVLDAVLLGEFVETLREAGLQPVGIANATATDIQAAA-MALGLPCFMG---RHGGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKPT-MAAAHLPSTSPRSEXXXXXXXXXXPNAATISSQPLXXXXXXAAPILPTKVIQGSVRTGQQVVAEGASLVILGHVNSGAEVSADGDIHIYGRLSGRALAGLGGDGKSKIFAGKFNAELVAIADVFTTCDFGEEMEEGREGVVLGAPTSVSLNERGGSLVFHS 412
            + AG  +T T   V G +YL+PTLRL   V   G  D++   +        +    P+++DL    ++       +R+              L   +  LR   L P+GI NA + DI+A A  +L +P  +       G+                                R  T  AAA  P+ +P                                      V++GSVRTGQQV A+   LV+LG VNSGAEV ADGDIHIYG L GRALAG+GG+  +K++  KF+AEL++IAD FTTCD  E  E G   VV   PT V L +  G+L F S
Sbjct:   15 AKAGASMTATGIHVLGGAYLIPTLRLHAPVRVNGEYDMR---RLVEQSRVNWNLRGPVILDLANVSSNGSPHNSPIRSSE------------LRSLIYALRSENLHPIGITNA-SEDIKAMAWKSLQVPSIISTRLEDDGDYEASDAMNRVAMHQLMEEAMGHEEAAQAIISERLDTSSAAAEAPAAAPAQRG--------------------------------MMVVEGSVRTGQQVYAKDQGLVVLGSVNSGAEVLADGDIHIYGTLKGRALAGIGGNTDAKVYVQKFDAELISIADTFTTCDALEAREIGH--VVDDKPTIVWLED--GALQFKS 301
[Close]
BLAST of NO17G02200 vs. NCBI_GenBank
Match: XP_008606122.1 (septum site-determining protein MinC [Saprolegnia diclina VS20] >EQC40423.1 septum site-determining protein MinC [Saprolegnia diclina VS20])

HSP 1 Score: 119.0 bits (297), Expect = 3.500e-23
Identity = 67/112 (59.82%), Postives = 81/112 (72.32%), Query Frame = 0 
Query:  300 VIQGSVRTGQQVVAEGASLVILGHVNSGAEVSADGDIHIYGRLSGRALAGLGGDGKSKIFAGKFNAELVAIADVFTTCDFGEEMEEGREGVVLGAPTSVSLNERGGSLVFHS 412
            V++GSVRTGQQV A+   LV+LG VNSGAEV ADGDIHIYG L GRALAG+GG+  +K++  KF+AEL++IAD FTTCD  E  E G   VV   PT V L +  G+L F S
Sbjct:  197 VVEGSVRTGQQVYAKDQGLVVLGSVNSGAEVLADGDIHIYGTLKGRALAGIGGNTDAKVYVQKFDAELISIADTFTTCDALEAREIGH--VVDDKPTIVWLED--GALQFKS 304
[Close]
BLAST of NO17G02200 vs. NCBI_GenBank
Match: OWZ10446.1 (Septum site-determining protein MinC [Phytophthora megakarya])

HSP 1 Score: 119.0 bits (297), Expect = 3.500e-23
Identity = 116/311 (37.30%), Postives = 160/311 (51.45%), Query Frame = 0 
Query:   92 LTVAGKSYLVPTLRLPRGVGPLDLQAGLKATTSLSAGYFKCAPIVVDLGEWMTSQPLPRGGVRTEAAGKGGEVLDAVLLGEFVETLREAGLQPVGIANATATDIQAAAMALGLPCFMGRHGGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKPTMAAAHLPSTSPRSEXXXXXXXXXXPNAATISSQPLXXXXXXAAPILPTKVIQGSVRTGQQVVAEGASLVILGHVNSGAEVSADGDIHIYGRLSGRALAGLGGDGKSKIFAGKFNAELVAIADVFTTCDFGEEMEEGREGVVLGAPTSVSLNE 403
            L + G+SYL+PTL L +  G  +  A  K +        +  P+V+DL      Q +   G     + K  E+ + +L       L+EAG  PVGI NA + D++ AA AL LP F+G                     XXXXXXXXXXXXXXX    T   A  P                    A++S+Q         A  LP  V+  SVR+GQQ+ A+  SLV+LG+V+SGAEV AD D+ + G L GRALAG+GG+ +++I    F+AEL++IA  FTTCD  E+ E G   + L  PT++SL +
Sbjct:   37 LELDGRSYLLPTLTLSKANGAKEQDA--KDSQFFQTRANRPTPVVLDL------QQVSSDGSPHSQSIKKHELRNEIL------QLQEAGYVPVGITNA-SEDVKKAAAALNLPYFIGTR--------------LQLEQXXXXXXXXXXXXXXXXXXXTFTDAEKP-------------------GASVSAQ--------TAEALPPMVVTHSVRSGQQIFAQNRSLVVLGNVSSGAEVMADEDVVVLGSLKGRALAGIGGNVRARIVCQSFDAELISIAHCFTTCDALEQDEVG--SLQLHKPTAISLQD 289
[Close]
BLAST of NO17G02200 vs. NCBI_GenBank
Match: OQR95463.1 (hypothetical protein THRCLA_07850 [Thraustotheca clavata])

HSP 1 Score: 117.1 bits (292), Expect = 1.300e-22
Identity = 63/124 (50.81%), Postives = 82/124 (66.13%), Query Frame = 0 
Query:  277 AATISSQPLXXXXXXAAPILPTKVIQGSVRTGQQVVAEGASLVILGHVNSGAEVSADGDIHIYGRLSGRALAGLGGDGKSKIFAGKFNAELVAIADVFTTCDFGEEMEEGREGVVLGAPTSVSL 401
            A T +  PL        P     +++GSVRTGQQV A+   L+++G V+SGAEV ADGDIH+YG L GRALAG+GG+  +K+FA KF+AEL++IAD FTTCD  E  E G   +V   PT + L
Sbjct:  158 ATTNAETPLKDEKTNTLPNAGMMLVEGSVRTGQQVYAKDQGLIVMGSVHSGAEVLADGDIHVYGTLKGRALAGIGGNNNAKVFAQKFDAELISIADTFTTCDELEARELGT--IVEDKPTIIWL 279
[Close]
BLAST of NO17G02200 vs. NCBI_GenBank
Match: ETI48782.1 (septum site-determining protein MinC [Phytophthora parasitica P1569] >ETK88674.1 septum site-determining protein MinC [Phytophthora parasitica] >ETL42062.1 septum site-determining protein MinC [Phytophthora parasitica] >ETM48440.1 septum site-determining protein MinC [Phytophthora parasitica] >ETO77509.1 septum site-determining protein MinC [Phytophthora parasitica P1976] >ETP18539.1 septum site-determining protein MinC [Phytophthora parasitica CJ01A1] >ETP46461.1 septum site-determining protein MinC [Phytophthora parasitica P10297] >KUF66929.1 septum site-determining protein MinC [Phytophthora nicotianae])

HSP 1 Score: 114.8 bits (286), Expect = 6.500e-22
Identity = 98/316 (31.01%), Postives = 151/316 (47.78%), Query Frame = 0 
Query:   92 LTVAGKSYLVPTLRLPRGVGPLDLQAGLKATTSLSAGYFKCAPIVVDLGEWMTSQPLPRGGVRTEAAGKGGEVLDAVLLGEFVETLREAGLQPVGIANATATDIQAAAMALGLPCFMGRHGGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKPTMA-----AAHLPSTSPRSEXXXXXXXXXXPNAATISSQPLXXXXXXAAPILPTKVIQGSVRTGQQVVAEGASLVILGHVNSGAEVSADGDIHIYGRLSGRALAGLGGDGKSKIFAGKFNAELVAIADVFTTCDFGEEMEEGREGVVLGAPTSVSLNE 403
            L + G+SYL+PTL L +           K +    A   +  P+V+DL +           V ++ +     +    L  E ++ L+EAG  PVGI NA + D++ AA AL LP F+G                                     +K  +A     A  +P+TS  +            +  ++++Q        +A  LP  V+  SVR+GQQ+ A+  SLV+LG+V+SGAEV AD D+ + G L GRALAG+GG+ +++I    F+AEL++IA  FTTCD   + E G   + L  PT++SL +
Sbjct:   41 LELDGRSYLLPTLTLSK-----VSSKEAKDSQLFQARANRSTPVVLDLQQ-----------VSSDGSPHSQSIKKHELRNEIMQ-LQEAGYMPVGITNA-SEDVKKAAAALNLPYFIGTR-------------------------------LHSQQKAVVATVEEKADEVPTTSNNT------FVEEEKSGVSVAAQ-------TSAESLPPMVVSHSVRSGQQIFAQNRSLVVLGNVSSGAEVMADDDVVVLGALKGRALAGIGGNVRARIVCQSFDAELISIAHCFTTCDDLGQDETG--SLQLHKPTAISLQD 292
[Close]
BLAST of NO17G02200 vs. NCBI_GenBank
Match: ETL95220.1 (septum site-determining protein MinC [Phytophthora parasitica])

HSP 1 Score: 114.8 bits (286), Expect = 6.500e-22
Identity = 98/316 (31.01%), Postives = 151/316 (47.78%), Query Frame = 0 
Query:   92 LTVAGKSYLVPTLRLPRGVGPLDLQAGLKATTSLSAGYFKCAPIVVDLGEWMTSQPLPRGGVRTEAAGKGGEVLDAVLLGEFVETLREAGLQPVGIANATATDIQAAAMALGLPCFMGRHGGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKPTMA-----AAHLPSTSPRSEXXXXXXXXXXPNAATISSQPLXXXXXXAAPILPTKVIQGSVRTGQQVVAEGASLVILGHVNSGAEVSADGDIHIYGRLSGRALAGLGGDGKSKIFAGKFNAELVAIADVFTTCDFGEEMEEGREGVVLGAPTSVSLNE 403
            L + G+SYL+PTL L +           K +    A   +  P+V+DL +           V ++ +     +    L  E ++ L+EAG  PVGI NA + D++ AA AL LP F+G                                     +K  +A     A  +P+TS  +            +  ++++Q        +A  LP  V+  SVR+GQQ+ A+  SLV+LG+V+SGAEV AD D+ + G L GRALAG+GG+ +++I    F+AEL++IA  FTTCD   + E G   + L  PT++SL +
Sbjct:   41 LELNGRSYLLPTLTLSK-----VSSKEAKDSQLFQARANRSTPVVLDLQQ-----------VSSDGSPHSQSIKKHELRNEIMQ-LQEAGYMPVGITNA-SEDVKKAAAALNLPYFIGTR-------------------------------LHSQQKAVVATVEEKADEVPTTSNNT------FVEEEKSGVSVAAQ-------TSAESLPPMVVSHSVRSGQQIFAQNRSLVVLGNVSSGAEVMADDDVVVLGALKGRALAGIGGNVRARIVCQSFDAELISIAHCFTTCDDLGQDETG--SLQLHKPTAISLQD 292
[Close]
BLAST of NO17G02200 vs. NCBI_GenBank
Match: XP_008903844.1 (septum site-determining protein MinC [Phytophthora parasitica INRA-310] >ETN10718.1 septum site-determining protein MinC [Phytophthora parasitica INRA-310])

HSP 1 Score: 114.8 bits (286), Expect = 6.500e-22
Identity = 98/316 (31.01%), Postives = 151/316 (47.78%), Query Frame = 0 
Query:   92 LTVAGKSYLVPTLRLPRGVGPLDLQAGLKATTSLSAGYFKCAPIVVDLGEWMTSQPLPRGGVRTEAAGKGGEVLDAVLLGEFVETLREAGLQPVGIANATATDIQAAAMALGLPCFMGRHGGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKPTMA-----AAHLPSTSPRSEXXXXXXXXXXPNAATISSQPLXXXXXXAAPILPTKVIQGSVRTGQQVVAEGASLVILGHVNSGAEVSADGDIHIYGRLSGRALAGLGGDGKSKIFAGKFNAELVAIADVFTTCDFGEEMEEGREGVVLGAPTSVSLNE 403
            L + G+SYL+PTL L +           K +    A   +  P+V+DL +           V ++ +     +    L  E ++ L+EAG  PVGI NA + D++ AA AL LP F+G                                     +K  +A     A  +P+TS  +            +  ++++Q        +A  LP  V+  SVR+GQQ+ A+  SLV+LG+V+SGAEV AD D+ + G L GRALAG+GG+ +++I    F+AEL++IA  FTTCD   + E G   + L  PT++SL +
Sbjct:   41 LELDGRSYLLPTLTLSK-----VSSKEAKDSQLFQARANRSTPVVLDLQQ-----------VSSDGSPHSQSIKKHELRNEIMQ-LQEAGYMPVGITNA-SEDVKKAAAALNLPYFIGTR-------------------------------LHSQQKAVVATVEEKADEVPTTSNNT------FVEEEKSGVSVAAQ-------TSAESLPPMVVSHSVRSGQQIFAQNRSLVVLGNVSSGAEVMADDDVVVLGALKGRALAGIGGNVRARIVCQSFDAELISIAHCFTTCDDLGQDETG--SLQLHKPTAISLQD 292
The following BLAST results are available for this feature:
BLAST of NO17G02200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24189.15.100e-7557.80septum site-determining protein [Nannochloropsis g... [more]
OQR83782.12.400e-2431.90hypothetical protein ACHHYP_14282 [Achlya hypogyna... [more]
XP_009537632.13.100e-2432.49hypothetical protein PHYSODRAFT_550682 [Phytophtho... [more]
XP_012198959.11.200e-2332.45hypothetical protein SPRG_05060 [Saprolegnia paras... [more]
XP_008606122.13.500e-2359.82septum site-determining protein MinC [Saprolegnia ... [more]
OWZ10446.13.500e-2337.30Septum site-determining protein MinC [Phytophthora... [more]
OQR95463.11.300e-2250.81hypothetical protein THRCLA_07850 [Thraustotheca c... [more]
ETI48782.16.500e-2231.01septum site-determining protein MinC [Phytophthora... [more]
ETL95220.16.500e-2231.01septum site-determining protein MinC [Phytophthora... [more]
XP_008903844.16.500e-2231.01septum site-determining protein MinC [Phytophthora... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003004NSK003004Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G02200.1NO17G02200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599594gene_7667Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100325g2gene6280Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G02200.1NO17G02200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G02200 ID=NO17G02200|Name=NO17G02200|organism=Nannochloropsis oceanica|type=gene|length=3093bp
GCTGCTGCTGCTGCTGCTGCTGCCGCTGTTGCTGTTGGCTGGTCCCATCC
GCTGGTAACGTTGCGGATGACACGAAGGCTGATGCTGGTTGCGATGGCAG
CTGTGCCCAAGCAGGGACAGGAGCAGTAGTAGCACCAGCAGCGACAGTGT
CAGCAGAAACAGAAGGCGAAAGATCAACCAGAGACTGCAGCGGCTGGGTG
GGAGGATGAGAACTTGTAAACACGGCATGTTCCGGGCTGAGGGAAGACGT
TTGGCTGGTGGCTGTTGCCGTGGTCGAGACCACGGATGCGGGGGGGCGGG
AGGATGAAGACGAGGAGGAAGGGAGGGAGGAGGAGGTTGACGGGGGCAAG
CATACTGGTAATGCTCCTTGCCCATCCAATGCCCCAATCGCTTCCAAATC
ATACAGAAATACATCCGACATGGCTCCTCCCCCACGATCCCGTAGCTGCT
GCTCCTGCAGCCGCTCCTCCTTCTTCTCCTTCATCTTTTTCTTCTCCTCC
CCTTCGTAGAGCATGTGGTCAAAATCCGAGTCCATATCAAAAATCTCGAG
GTCGTCCCCGAACAGGTTTACCAACGGTTCCTCTCCTTCACCACAATTAC
CGCCTGGCAAACCCGGTATAGGAATGACAGCTTTCTGCTCCCCATCCTGC
TGCTGCTGCTGGGCGTCACCCGTGGAGAGAGCCCTTGTGGTCTGCCTTTT
CCGTGGTCTTCCGCTGCTGCTGCCATCCCCGCCGATCCCTGCCCCACGGG
TGACACTGGATGATCGCTTTGCTCCCATACTTTGAGTAGTTGTACACTTG
TCGGCGTGTGTGGCGCTTGCTGTCTGTGCGTGTGATTGAAAAGAAACACA
CGACTTATCCAACGCCACCTGCCCTGTCCTAGCTAGCTGCGAGGCGTGCC
CTTGAGCTCCCCGTCAGCGTTGTCACCGGTGCATGATGTGCCTGATTGTC
TGTCCTGATATCGATACGAGACTCTTGAAGGCGGCAATGTGTCTTGCCTT
CGCCTCTGGGTTTCGTTTGACAATGGGTGTGTTCGGGAATAGTGAGATCA
AACATTAAGTCCAGGCTCGAGCATGGCAGCCAAGCCTAGCACTTGTTATC
ATTCTACTTCCGACTGTTGAAATGGTGGAGCAATTCCACATTTGTTTGCG
TGGAGTGGTAATGATGGGGTGGCTGAGAGAGGAGAAAAAACTTCCCGATG
ACGGCTTTGACTGATCGATGAAAGGCTCAAGTTGGAGTAACCCTGACTCT
CACATGCCGCTGGTCAGTCCTCATAAGCCAACACGACAAAGGACACAGTC
CACAACCGCCTCATCGCAGCGCTTGTCCTCATGCCAATGTCAATGCGAGA
AGGTGCCTGGTGCGGATGAGGCTGGTGTGGGTTATGCGCAGGTCCTTCGC
ATTTAACAGACCTGGCCATCCTCGCCAACTCGGCGTCGTGGATGGATCAT
CGCTCAAAAGTCTGGCCCTTCAGCATTCCCCCAAATTCCCTATCTCCATC
TCACAATCCCCACACACCATTGTCTCTCCACAAGGAAGATTTGCATCCTC
GTTCAGCACCCCAACAGCAATAGGATGCGGGCACGACTTGCCGTCACGTC
TGCCTCTACGATTCTTTCCAACCCCCGCGCAATCCGTTGTAGCAGCAGCA
GAACAGCAGCAACCACAGCTACGTCCCCTCCGCAACAAGCCGAGGCCGGC
AAGCCTCACGCGCACCTACGACAATATTTGGATGCCTGGATGGGCAGCAC
GGGCACGCTCAACACCACCCGTAGCACCACCACTGGCCCCGTCGCGTCCC
ACCAGCATCACCATCCCCACCCTTCTTCCGCCGGCCACCCCATCACTCTT
ACTGTGGCCGGCAAATCCTATCTGGTGCCTACATTGCGCTTGCCTCGCGG
TGTGGGCCCCCTGGACCTTCAAGCCGGTCTAAAAGCCACCACTAGTTTGA
GCGCTGGTTACTTTAAATGTGCCCCTATTGTGGTCGACCTAGGCGAATGG
ATGACTTCGCAGCCCTTACCACGGGGAGGGGTTCGGACAGAAGCGGCGGG
AAAGGGAGGCGAGGTGTTAGACGCGGTCTTGTTAGGGGAATTTGTGGAGA
CCTTGAGGGAGGCAGGATTGCAACCCGTGGGGATCGCGAATGCCACAGCG
ACAGATATCCAAGCTGCAGCGATGGCTTTGGGTTTGCCGTGTTTTATGGG
AAGGCATGGTGGTAATGGTATTAATAGTAGTAATTCACCAGGTTCTGCTG
CTGCTCCTGCTAATGCTGCTGCTCCTGCTGCTGCGATGACACCGTCGACT
GCAAGACCAGCGCGAAAGCCCACCATGGCCGCCGCGCATCTTCCCTCCAC
GTCCCCACGGTCAGAAGCGCCAAAACCATCAACTTCCCCGACTTCGCCGA
ACGCAGCCACTATCTCCTCCCAGCCTTTGTCTCCACCCTCCCCCTCCGCT
GCCCCGATACTCCCAACAAAGgtaaaaatgcgcaataggcagcttaagcg
actctcccgtcatctgcatgagaccatttaccagtcctctctctccccct
ccttccattccctcccagGTAATCCAAGGCAGTGTCCGTACTGGACAGCA
AGTAGTGGCCGAAGGTGCTTCTCTCGTCATTCTGGGACATGTTAATTCCG
GTGCAGAGGTGTCTGCGGATGGTGATATACACATTTATGGACGACTGTCT
GGTAGGGCTCTGGCGGGGTTAGGGGGGGATGGGAAGAGTAAGATTTTTGC
GGGAAAGTTCAATGCGGAGCTGGTAGCGATTGCCGATGTATTCACGACAT
GCGATTTCGGGGAGGAGATGGAGGAGGGGAGGGAGGGGGTTGTTTTGGGT
GCGCCGACGAGCGTGAGTTTGAATGAGCGGGGAGGGAGCTTGGTGTTCCA
TTCGTTTAAGGTCTAGGAAGGGAGTGACGGACAGAAGGGATAACGAGAAA
GGAGGAGGAGGATTGAAGAGCGTTTGTTCAGGCGCAGAAATGCCGAGTCA
AAAAGACACACTGAAAGGAGGGAGTAGGCGCAAAAAAAGATAAAAACAGT
GTAATAGCACATCGACTGACCAGAACGACTTTTCAACCGAGGG
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protein sequence of NO17G02200.1

>NO17G02200.1-protein ID=NO17G02200.1-protein|Name=NO17G02200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=415bp
MRARLAVTSASTILSNPRAIRCSSSRTAATTATSPPQQAEAGKPHAHLRQ
YLDAWMGSTGTLNTTRSTTTGPVASHQHHHPHPSSAGHPITLTVAGKSYL
VPTLRLPRGVGPLDLQAGLKATTSLSAGYFKCAPIVVDLGEWMTSQPLPR
GGVRTEAAGKGGEVLDAVLLGEFVETLREAGLQPVGIANATATDIQAAAM
ALGLPCFMGRHGGNGINSSNSPGSAAAPANAAAPAAAMTPSTARPARKPT
MAAAHLPSTSPRSEAPKPSTSPTSPNAATISSQPLSPPSPSAAPILPTKV
IQGSVRTGQQVVAEGASLVILGHVNSGAEVSADGDIHIYGRLSGRALAGL
GGDGKSKIFAGKFNAELVAIADVFTTCDFGEEMEEGREGVVLGAPTSVSL
NERGGSLVFHSFKV*
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Synonyms
Publications