NO17G02130, NO17G02130 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02130 vs. NCBI_GenBank
Match: XP_002297067.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED86795.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 68.6 bits (166), Expect = 8.600e-8 Identity = 89/375 (23.73%), Postives = 142/375 (37.87%), Query Frame = 0 Query: 303 PSLPPSSSPTNIFFVHCNHGFGANSLSYEPVLESLSSTLGQQFPTLAAAHDAPGFGLSESPAEMEDGGGQEEEGLYSFEN------------------NARLGGRLMAALGEEGGREERGEEQHVYIGHSMGSLTSAHMALNKLESQDEEARGREESLEKXXXXXXXXXXXXXXXXXXXXIMPMRRSPSRLPPTGQTFLPRLFPARLLRFIFSKTGPVAHSLLLVLTSFFL---------RSLCYSEKFWRDGLGVAWGVGGPPTSLTLAHYRLPSLKEGWERGLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGRLKVLIIHGTKDRVVAMENSRRLAIAMK-EGGKGVVEVVEIEGVGHVPHEE 650 P++ P + ++H HGFGA+SLS+ PVL SL + L + + AHD PGFG ++ P + + GG E+ Y F N + +Q GHSMG+ ++ MAL+ E Q +P + S+ F ++ + + FI K HSL + FL R + +++FWR+GL +AWG + + ++ PS+ +GWE GL KV+I++G+ DRVV ++ A+A K + ++VV +EG+GH P EE Sbjct: 290 PNINTKRQPLDAIYLH--HGFGASSLSWLPVLPSLVNRLNAR---VGIAHDTPGFGFTDRP-DPDVVGGLEQ---YGFGNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKATTDAKQVAIFGHSMGAKSALLMALSSHEMQ-----------------WKPKLVVLVAPAVEGVALPPLKGRSKASSIDPPFANKM--SGMSGFIKRK----LHSLWVGWRKIFLDYPFRYGLKRLVSGNKQFWREGLSLAWGDSNRLSESDVLRFQWPSIGKGWESGLMAFTRSRLSLGSSSIPDDGQLLKEVASL----------SDTKVVIVYGSNDRVVQIDG----AVAEKIKREYPSIKVVRMEGMGHDPFEE 618
BLAST of NO17G02130 vs. NCBI_GenBank
Match: PSC74181.1 (stAR-related lipid transfer mitochondrial-like [Micractinium conductrix]) HSP 1 Score: 68.6 bits (166), Expect = 8.600e-8 Identity = 48/149 (32.21%), Postives = 59/149 (39.60%), Query Frame = 0 Query: 515 LRSLCYSEKFWRDGLGVAWGVGGPPTSLTLAHYRLPSLKEGWERGL--SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGRLKVLIIHGTKDRVVAMENSRRLAIAMKEGGKGVVEVVEIEGVGHVPHEEVPGRFVETVVEF 662 LR L S +FW GL AW G T + YR L GWE G+ + +KVLI+HG D +V NSRRLA + E+V E GH+P EE P RFV+TV F Sbjct: 1071 LRRLIRSRRFWERGLASAWHDGRRVTRDYVNAYRSGQLVRGWEGGILRFLSARFAEKHGFWGSLREAVQGDGHLTQAERLARAIKRHNIKVLIVHGASDALVPCANSRRLAALLPN-----AELVVFEKCGHMPQEECPERFVQTVQRF 1214
BLAST of NO17G02130 vs. NCBI_GenBank
Match: XP_005706159.1 (hydrolase, alpha/beta fold family protein [Galdieria sulphuraria] >EME29639.1 hydrolase, alpha/beta fold family protein [Galdieria sulphuraria]) HSP 1 Score: 66.6 bits (161), Expect = 3.300e-7 Identity = 85/360 (23.61%), Postives = 125/360 (34.72%), Query Frame = 0 Query: 321 HGFGANSLSYEPVLESLSSTLGQQFPTLAAAHDAPGFGLSESPAEMEDGGGQEEEGLYSFENNARLGGRLMAALGEEGGREERGEEQHVYIGHSMGSLTSAHMAL------------------NKLESQDEEARGREESLEKXXXXXXXXXXXXXXXXXXXXIMPMRRSPSRLPPTGQTFLPRLFPARLLRFIFSKTGPVAHSLLLVLTSFFLRSLCYSEKFWRDGLGVAWGVGGPPTSLTLAHYRLPSLKEGWERGLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGRLKVLIIHGTKDRVVAMENSRRLAIAMKEGGKGVVEVVEIEGVGHVPHEEVPGRFVETVVEFV 663 HGFG+ +Y +L G+Q D P FG S P ME YS L M L + G HV +GHSMG LT+A +L N S+ ++ E S + L R+F L+R IF + +A ++ + F L L E FW+ GL +AW T + YRLP+L + W+RG + + +L+IHG +DR++ +E S +LA + + +V I GHVP EE P R + +F+ Sbjct: 166 HGFGSWLYTY----HALWGAYGKQLDCALIGFDRPAFGFSSRPRNME---------YYSQHFAVYLVHFFMDRL------SQLGISNHVIVGHSMGGLTAALASLKYPQRVKALILIAAAIPINPPSSKSNDSGSVESSTGRMDSVHVVVWKSLHWVGLLV-----------------VTLIRIFRNGLIR-IFVR---LAALVIQPVMYFSLSLLVSQEMFWKRGLAMAWYSIEKLTDKVIEQYRLPTLVKDWQRGF--------IKFVFANRNKTPFYSSSSLEEQDIVDQLSKSNIPILLIHGKEDRIIPLERSLQLAANIPQ-----ARLVTIPHCGHVPQEEQPERVYNVIRQFL 472
BLAST of NO17G02130 vs. NCBI_GenBank
Match: OEU20567.1 (alpha/beta-hydrolase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 66.2 bits (160), Expect = 4.300e-7 Identity = 82/353 (23.23%), Postives = 133/353 (37.68%), Query Frame = 0 Query: 317 VHCNHGFGANSLSYEPVLESLSSTLGQQFPTLAAAHDAPGFGLSESPAEMEDGGGQEEEGLYSFENNARLGGR-LMAALGEEGGREERGEEQHV----YIGHSMGSLTSAHMALNKLESQDEEARGREESLEKXXXXXXXXXXXXXXXXXXXXIMPMRRSPSRLPPTGQTFLPRLFPARLLRFIFSKTGPVAHSLLLVLTSFFLRSLCYSEKFWRDGLGVAWGVGGPPTSLTLAHYRLPSLKEGWERGLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGRLKVLIIHGTKDRVVAMENSRRLAIAMK--EGGKGVVEVVEIEGVGHVPHEEVPGRFVETVVEFV 663 ++ HGFGA+SLS+ P+ L+ LG + A HDA GFG ++ P ++ Y+ + +A + + L+ + + V +GHSMGSL+ +A + + P SR P+ +T P+ + R R + + H + L +T + LR ++ WR GL +A+G T + Y PS+ GWE GL KV+II G+KD++V + + +K + VV ++E+EG+GH EE F V E V Sbjct: 185 IYFQHGFGASSLSWLPLFAPLAHKLGAR---TALGHDAVGFGFTDRP---------KDTRWYTSKQSASIAQQILLQNIAADANNXXXXXXXXVLPVALVGHSMGSLSILRLATQLPHNMPK---------------------------LIILSSPALGLLSRKKPSNKT-SPQSWMGRRRRDV---GFAIQHRVTLPITRYILRRAVGTKNSWRTGLSLAYGNKNTVTDSDVLRYAWPSIGHGWEDGLLNFAAAQQMPQEDELDDDIKLMRRVLELP----------NTKVVIILGSKDKIVPSKLVYKFVENVKATTTDEVVVPIIEMEGLGHCAFEEDADAFCLKVGELV 484 The following BLAST results are available for this feature:
BLAST of NO17G02130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 14
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02130 ID=NO17G02130|Name=NO17G02130|organism=Nannochloropsis oceanica|type=gene|length=2196bpback to top protein sequence of NO17G02130.1 >NO17G02130.1-protein ID=NO17G02130.1-protein|Name=NO17G02130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=667bpback to top Synonyms
Publications
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