NO17G02010, NO17G02010 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G02010 vs. NCBI_GenBank
Match: EWM24209.1 (elmo domain-containing protein a [Nannochloropsis gaditana]) HSP 1 Score: 410.2 bits (1053), Expect = 9.000e-111 Identity = 251/455 (55.16%), Postives = 292/455 (64.18%), Query Frame = 0 Query: 41 PILVTYEIIGPADAAETGLTSSFELLGYNTSSNFSREVPTVQALREAFPYLGKFHFRAKIPLPLSTPSQYAWLDLADDDAPLPVWVERNAQQCVEIRALPLVLPEAPGEDEEEDGGELDFSGPDLDQDIVEASTCGGGEGGWEKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQLKDAGESVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSPHGPSAGAVRYLRKWEEALVTPPDAELLSTLGAALFPPGEGGREGGPGGKINWRRAGCEGEEPIRDLRGTGSMCAKCLIYTARTYPRKIQQILSRGEEDEEEGREGGHAYPLVGVANSLTLMLADIFKLRDGRYVHVQNVFWPLFEGGGYGTIEEVFSAALGYLDRRWVETEAGIEGFPRLVQHVRRGLEGVLGQAPVSLPHFQAMAEEAGL 496 P+LV YE IGPADA ETG +SSFEL +S+ +V TV ALREAFPY+G FHFRAKIP +QYAWLDL ++D PLP+ E + Q V IR LPL + + + ++GGELDFSGPDLDQDIVE +C GEGG +G QLK GESV+ XXXXXXXXXXXXXXXXXXXXXXXXXX P GPS +VRYLR+WE+ALVTPPDAE L L ALFP EG WRRAGCE E+P+R+ RGTGSMC +CL Y ARTYP K Q IL R E ++EG YPL+GV+NSL L++ DIFKLRD RYVHVQ+ W LFEGGGYGT+EEVFSAAL YLDRRW+ETEA IEGF L + RR LEGVLGQ P++LPHFQA+A++AGL Sbjct: 4 PVLVAYEFIGPADAPETGFSSSFELF----ASDSPTDVLTVLALREAFPYVGDFHFRAKIPF---QETQYAWLDLTEEDTPLPLLTEESDQPVVAIRVLPLAFEDEDEDRQGKNGGELDFSGPDLDQDIVE--SCVLGEGGGSRG------GGGDALGVGGGRDASFSSPGGSYGNWAHQLKGVGESVITXXXXXXXXXXXXXXXXXXXXXXXXXXRLVGEGLGGGERGEGGAGDRREGRSLVPEGPSPSSVRYLRRWEDALVTPPDAETLLALWKALFPGAASRDEGARARSRQWRRAGCEEEDPLREFRGTGSMCVRCLTYFARTYPEKTQDILERYEAGKKEGCGNQEMYPLIGVSNSLILIMVDIFKLRDARYVHVQSTMWNLFEGGGYGTMEEVFSAALAYLDRRWMETEASIEGFSTLARETRRALEGVLGQGPLNLPHFQALAQDAGL 443
BLAST of NO17G02010 vs. NCBI_GenBank
Match: CBN76535.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 91.7 bits (226), Expect = 7.100e-15 Identity = 64/218 (29.36%), Postives = 97/218 (44.50%), Query Frame = 0 Query: 284 PHGPSAGAVRYLRKWEEALVTPPDA---ELLSTLG---AALFPPGEGGREGGPGGKINWRRAGCEGEEPIRDLRGTGSMCAKCLIYTARTYPRKIQQILSRGEEDEEEGREGGHAYPLVGVANSLTLMLADIFKLRDGRYVHVQNVFWPLFEGGGYGTIEEVFSAALGYLDRRWVETEAGIEGFPRLVQHVRRGLEGVLGQAPVSLPHFQAMAEEAGL 496 P PS A+ L + L TP A E ++ LG LFP E P W+ AG + D RGTG + K +++ + Y RK + + G YP VAN+LTLMLAD+ ++R ++ + +W +F+ G E+F A LD W E A F +++ + + + +L P +LP F AEE G+ Sbjct: 321 PVVPSEEAMENLHELANFLGTPFSATSREHVNDLGKVWMCLFPDDEFEGAESP----RWQEAGFQESNVSLDFRGTGVLALKSMVFFCQEYDRKALSLC------RAQSAGGSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFD--RRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEEMGM 526
BLAST of NO17G02010 vs. NCBI_GenBank
Match: XP_009516479.1 (hypothetical protein PHYSODRAFT_309685 [Phytophthora sojae] >EGZ29204.1 hypothetical protein PHYSODRAFT_309685 [Phytophthora sojae]) HSP 1 Score: 87.0 bits (214), Expect = 1.800e-13 Identity = 48/162 (29.63%), Postives = 77/162 (47.53%), Query Frame = 0 Query: 334 INWRRAGCEGEEPIRDLRGTGSMCAKCLIYTARTYPRKIQQILSRGEEDEEEGREGGHAYPLVGVANSLTLMLADIFKLRDGRYVHVQNVFWPLFEGGGYGTIEEVFSAALGYLDRRWVETEAGIEGFPRLVQHVRRGLEGVLGQAPVSLPHFQAMAEEAGL 496 +NW G + P D RG G + KCL+Y +P +++ I D +G+ YP+ +LT +LA + +L DGR+ + FW LFE E+F A +D W A F +++ R+ + +L QAP +L +A +E+A L Sbjct: 177 VNWVALGFQNASPETDFRGGGVLAMKCLLYAFEAHPTEMRAIQMDQMPDSMDGKHKKRWYPVCVAGINLTCLLAGLLQLGDGRFAERKETFWQLFEEP--AAFYELFFLAFIKMDAIWHRLNATYMEFGVVLKVTRKSVGFMLEQAPATLTDLRAASEQAFL 336
BLAST of NO17G02010 vs. NCBI_GenBank
Match: ETI44506.1 (hypothetical protein F443_10803 [Phytophthora parasitica P1569]) HSP 1 Score: 87.0 bits (214), Expect = 1.800e-13 Identity = 45/162 (27.78%), Postives = 79/162 (48.77%), Query Frame = 0 Query: 334 INWRRAGCEGEEPIRDLRGTGSMCAKCLIYTARTYPRKIQQILSRGEEDEEEGREGGHAYPLVGVANSLTLMLADIFKLRDGRYVHVQNVFWPLFEGGGYGTIEEVFSAALGYLDRRWVETEAGIEGFPRLVQHVRRGLEGVLGQAPVSLPHFQAMAEEAGL 496 ++W + G + P D RG G + KCL+Y +P +++ I D ++G+ YP+ +LT +LA + +L DGR+ + +FW LFE E+F A +D W A F +++ R+ + +L QAP +L + +++A L Sbjct: 220 VDWVKLGFQNASPETDFRGGGVLAMKCLLYAFEAHPMEMRAIHYEQMPDSQDGKHKKRWYPVCVAGINLTCLLAGLLQLGDGRFADKKEIFWQLFEEP--AAFYELFFLAFVKMDAIWHRLNATYMEFGVVLKVTRKSVAFMLAQAPTTLMDLREASDQAFL 379
BLAST of NO17G02010 vs. NCBI_GenBank
Match: ETL91036.1 (hypothetical protein L917_10360 [Phytophthora parasitica]) HSP 1 Score: 86.3 bits (212), Expect = 3.000e-13 Identity = 45/162 (27.78%), Postives = 79/162 (48.77%), Query Frame = 0 Query: 334 INWRRAGCEGEEPIRDLRGTGSMCAKCLIYTARTYPRKIQQILSRGEEDEEEGREGGHAYPLVGVANSLTLMLADIFKLRDGRYVHVQNVFWPLFEGGGYGTIEEVFSAALGYLDRRWVETEAGIEGFPRLVQHVRRGLEGVLGQAPVSLPHFQAMAEEAGL 496 ++W + G + P D RG G + KCL+Y +P +++ I D ++G+ YP+ +LT +LA + +L DGR+ + FW LFE E+F A +D W+ A F +++ R+ + +L QAP +L + +++A L Sbjct: 220 VDWVKLGFQNASPETDFRGGGVLAMKCLLYAFEAHPMEMRAIHYEQMPDSQDGKHKKRWYPVCVAGINLTCLLAGLLQLGDGRFADKKETFWQLFEEP--AAFYELFFLAFMKMDAIWLRLNATYMEFGVVLKVTRKSVVFMLEQAPATLMDLREASDQAFL 379
BLAST of NO17G02010 vs. NCBI_GenBank
Match: ETO59074.1 (hypothetical protein F444_22534 [Phytophthora parasitica P1976]) HSP 1 Score: 85.9 bits (211), Expect = 3.900e-13 Identity = 45/162 (27.78%), Postives = 78/162 (48.15%), Query Frame = 0 Query: 334 INWRRAGCEGEEPIRDLRGTGSMCAKCLIYTARTYPRKIQQILSRGEEDEEEGREGGHAYPLVGVANSLTLMLADIFKLRDGRYVHVQNVFWPLFEGGGYGTIEEVFSAALGYLDRRWVETEAGIEGFPRLVQHVRRGLEGVLGQAPVSLPHFQAMAEEAGL 496 ++W + G + P D RG G + KCL+Y +P +++ I D ++G+ YP+ +LT +LA + +L DGR+ + FW LFE E+F A +D W A F +++ R+ + +L QAP +L + +++A L Sbjct: 220 VDWVKLGFQNASPETDFRGGGVLAMKCLLYAFEAHPMEMRAIHYEQMPDSQDGKHKKRWYPVCVAGINLTCLLAGLLQLGDGRFADKKETFWQLFEEP--AAFYELFFLAFVKMDAIWHRLNATYMEFGVVLKVTRKSVAFMLAQAPTTLMDLREASDQAFL 379
BLAST of NO17G02010 vs. NCBI_GenBank
Match: XP_002895301.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY58793.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 85.1 bits (209), Expect = 6.700e-13 Identity = 46/162 (28.40%), Postives = 79/162 (48.77%), Query Frame = 0 Query: 334 INWRRAGCEGEEPIRDLRGTGSMCAKCLIYTARTYPRKIQQILSRGEEDEEEGREGGHAYPLVGVANSLTLMLADIFKLRDGRYVHVQNVFWPLFEGGGYGTIEEVFSAALGYLDRRWVETEAGIEGFPRLVQHVRRGLEGVLGQAPVSLPHFQAMAEEAGL 496 ++W + G + P D RG G + KCL+Y +P +++ I D ++G+ YP+ +LT +LA + +L DGR+ +N +WPLFE E+F A +D W A F +++ R+ + +L Q P +L + +E+A L Sbjct: 133 VDWVQLGFQNASPETDFRGGGVLAVKCLLYAFEAHPMEMRAIHYEQMPDAQDGKH-KRWYPVCVAGINLTCLLAGLLQLGDGRFADKKNAYWPLFEEP--AAFYELFFLAFIKMDAIWHRLNATYMEFGVVLKVTRKSVAFMLAQTPTTLMDLREASEQAFL 291
BLAST of NO17G02010 vs. NCBI_GenBank
Match: ETK84477.1 (hypothetical protein L915_10547 [Phytophthora parasitica] >ETL37917.1 hypothetical protein L916_10436 [Phytophthora parasitica] >ETP14318.1 hypothetical protein F441_10730 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 84.7 bits (208), Expect = 8.700e-13 Identity = 45/162 (27.78%), Postives = 78/162 (48.15%), Query Frame = 0 Query: 334 INWRRAGCEGEEPIRDLRGTGSMCAKCLIYTARTYPRKIQQILSRGEEDEEEGREGGHAYPLVGVANSLTLMLADIFKLRDGRYVHVQNVFWPLFEGGGYGTIEEVFSAALGYLDRRWVETEAGIEGFPRLVQHVRRGLEGVLGQAPVSLPHFQAMAEEAGL 496 ++W + G + P D RG G + KCL+Y +P +++ I D ++G+ YP+ +LT +LA + +L DGR+ + FW LFE E+F A +D W A F +++ R+ + +L QAP +L + +++A L Sbjct: 220 VDWVKLGFQNASPETDFRGGGVLAMKCLLYAFEAHPMEMRAIHYEQMPDSQDGKHKKRWYPVCVAGINLTCLLAGLLQLGDGRFADKKETFWQLFEEP--AAFYELFFLAFMKMDAIWHRLNATYMEFGVVLKVTRKSVVFMLEQAPATLMDLREASDQAFL 379
BLAST of NO17G02010 vs. NCBI_GenBank
Match: ETM44356.1 (hypothetical protein L914_10397 [Phytophthora parasitica]) HSP 1 Score: 84.7 bits (208), Expect = 8.700e-13 Identity = 45/162 (27.78%), Postives = 78/162 (48.15%), Query Frame = 0 Query: 334 INWRRAGCEGEEPIRDLRGTGSMCAKCLIYTARTYPRKIQQILSRGEEDEEEGREGGHAYPLVGVANSLTLMLADIFKLRDGRYVHVQNVFWPLFEGGGYGTIEEVFSAALGYLDRRWVETEAGIEGFPRLVQHVRRGLEGVLGQAPVSLPHFQAMAEEAGL 496 ++W + G + P D RG G + KCL+Y +P +++ I D ++G+ YP+ +LT +LA + +L DGR+ + FW LFE E+F A +D W A F +++ R+ + +L QAP +L + +++A L Sbjct: 220 VDWVKLGFQNASPETDFRGGGVLAMKCLLYAFEAHPMEMRAIHYEQMPDSQDGKHKKRWYPVCVAGINLTCLLAGLLQLGDGRFADKKETFWQLFEEP--AAFYELFFLAFMKMDAIWHRLNATYMEFGVVLKVTRKSVVFMLEQAPATLMDLREASDQAFL 379
BLAST of NO17G02010 vs. NCBI_GenBank
Match: XP_008906753.1 (hypothetical protein PPTG_12469 [Phytophthora parasitica INRA-310] >ETN07949.1 hypothetical protein PPTG_12469 [Phytophthora parasitica INRA-310] >ETP42386.1 hypothetical protein F442_10703 [Phytophthora parasitica P10297]) HSP 1 Score: 84.7 bits (208), Expect = 8.700e-13 Identity = 45/162 (27.78%), Postives = 78/162 (48.15%), Query Frame = 0 Query: 334 INWRRAGCEGEEPIRDLRGTGSMCAKCLIYTARTYPRKIQQILSRGEEDEEEGREGGHAYPLVGVANSLTLMLADIFKLRDGRYVHVQNVFWPLFEGGGYGTIEEVFSAALGYLDRRWVETEAGIEGFPRLVQHVRRGLEGVLGQAPVSLPHFQAMAEEAGL 496 ++W + G + P D RG G + KCL+Y +P +++ I D ++G+ YP+ +LT +LA + +L DGR+ + FW LFE E+F A +D W A F +++ R+ + +L QAP +L + +++A L Sbjct: 220 VDWVKLGFQNASPETDFRGGGVLAMKCLLYAFEAHPMEMRAIHYEQMPDSQDGKHKKRWYPVCVAGINLTCLLAGLLQLGDGRFADKKETFWQLFEEP--AAFYELFFLAFMKMDAIWHRLNATYMEFGVVLKVTRKSVVFMLEQAPATLMDLREASDQAFL 379 The following BLAST results are available for this feature:
BLAST of NO17G02010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G02010 ID=NO17G02010|Name=NO17G02010|organism=Nannochloropsis oceanica|type=gene|length=1723bpback to top protein sequence of NO17G02010.1 >NO17G02010.1-protein ID=NO17G02010.1-protein|Name=NO17G02010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=499bpback to top Synonyms
Publications
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