NO17G01930, NO17G01930 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G01930 vs. NCBI_GenBank
Match: XP_005710875.1 (unnamed protein product [Chondrus crispus] >CDF40581.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 171.8 bits (434), Expect = 3.300e-39 Identity = 106/277 (38.27%), Postives = 163/277 (58.84%), Query Frame = 0 Query: 21 AFLLPSPTAPCPSSAATSRATNVFEQLQPYRSSRINRLYMGRRAAKNAARKGKSDALKTKIYASYGKKLVMAVKAGGPEPDVNRALAVLIREAKAQGVPTDNVQRAIQRGSSANEVDYKEAVYEAYGYGGAGIIINCLTDNTNRAKTEINNVIKKSSVKLGTVGSVSYNFERKGRLDL--AGMMDEDSVLEAALEADVEEVDTKTNEEENTTSVWVDAASVSGLREVLLERGVEIKASTLVNVPKALVDCSDEDFEGNMNVIEALEELDDVDSVEHN 296 AFL P+ ++ T R V + + L MGRR+ K RK +A +TK++A GK + MA KAGGP+ N+ALA I AKA P D +++AI R +S ++ D+KE+ +EAYG+GG GI I+ LTDNTNRA +I + KS +K+ + GSV++NF+RKG + + + D D +L AA++A EE + N +++ V + A+++ R+ L G + + L VPKALV S++D E N++ ++ L+ L+DVD V N Sbjct: 8 AFLAPTFVQKFSAARVTDRRAAVCPK------EGAHGLRMGRRSEKIKGRKDAQNAQRTKVFARIGKMITMAAKAGGPDVIANKALADAIDTAKAASFPKDTMEKAIARATSVDQADFKESSFEAYGHGGTGIYIDVLTDNTNRASADIRTALNKSKLKIASPGSVAFNFDRKGVIQVIAGSVTDADELLLAAIDAGAEECELDDN-DDSVYRVITEPANLTPARKALETNGYAVDIAQLEMVPKALVTVSEDDMERNLHGVDMLQSLEDVDGVYMN 277
BLAST of NO17G01930 vs. NCBI_GenBank
Match: XP_001699839.1 (predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 171.0 bits (432), Expect = 5.700e-39 Identity = 106/241 (43.98%), Postives = 145/241 (60.17%), Query Frame = 0 Query: 61 GRRAAKNAARKGKSDALKTKIYASYGKKLVMAVKAGGPEPDVNRALAVLIREAKAQGVPTDNVQRAIQRGSSANEVDYKEAVYEAYGYGGAGIIINCLTDNTNRAKTEINNVIKKSSVKLGTVGSVSYNFERKGRLDLAGMMDEDSVLEAALEADVEEVDTKTNEEENTTS----VWVDAASVSGLREVLLERGVEI--KASTLVNVPKALVDCSDEDFEGNMNVIEALEELDDVDSVEHN 296 GRRAAK A RKGKSDA K+KIY GKK++ KAGG +P N AL L+R+AK GVP D V+R ++R + A + DY+E YEAYG GG G+++ CLTDN NR +E+ + K+ K+ GSV +NF+R G + + G ED+V EAA+EA E+V+ EE+ S V+V + S + + G + + S LV A V+ DE F N ++E L ELDDVD+V N Sbjct: 51 GRRAAKIALRKGKSDAKKSKIYGRIGKKIIQLAKAGGADPATNAALDTLLRQAKDLGVPKDIVERNLKRATDAKQGDYQEITYEAYGPGGTGLVVFCLTDNVNRTASEVKPTVTKAGAKVAEPGSVLFNFQRCGMIVVDG-TTEDAVFEAAMEAGAEDVEPVPPEEDGAPSTSYKVFVPVEAFSSTKTAMRGLGFSVNEEDSDLVFRAAAPVEVDDEAFARNEALVEKLLELDDVDAVFTN 290
BLAST of NO17G01930 vs. NCBI_GenBank
Match: PNW86836.1 (hypothetical protein CHLRE_02g097550v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 169.9 bits (429), Expect = 1.300e-38 Identity = 105/241 (43.57%), Postives = 145/241 (60.17%), Query Frame = 0 Query: 61 GRRAAKNAARKGKSDALKTKIYASYGKKLVMAVKAGGPEPDVNRALAVLIREAKAQGVPTDNVQRAIQRGSSANEVDYKEAVYEAYGYGGAGIIINCLTDNTNRAKTEINNVIKKSSVKLGTVGSVSYNFERKGRLDLAGMMDEDSVLEAALEADVEEVDTKTNEEENTTS----VWVDAASVSGLREVLLERGVEI--KASTLVNVPKALVDCSDEDFEGNMNVIEALEELDDVDSVEHN 296 GRRAAK A RKGKSDA K+KIY GKK++ KAGG +P N AL L+R+AK GVP D V+R ++R + A + DY+E YEAYG GG G+++ CLTDN NR +E+ + K+ K+ GSV +NF+R G + + G ED+V EAA+EA E+V+ EE+ S ++V + S + + G + + S LV A V+ DE F N ++E L ELDDVD+V N Sbjct: 51 GRRAAKIALRKGKSDAKKSKIYGRIGKKIIQLAKAGGADPATNAALDTLLRQAKDLGVPKDIVERNLKRATDAKQGDYQEITYEAYGPGGTGLVVFCLTDNVNRTASEVKPTVTKAGAKVAEPGSVLFNFQRCGMIVVDG-TTEDAVFEAAMEAGAEDVEPVPPEEDGAPSTSYKLFVPVEAFSSTKTAMRGLGFSVNEEDSDLVFRAAAPVEVDDEAFARNEALVEKLLELDDVDAVFTN 290
BLAST of NO17G01930 vs. NCBI_GenBank
Match: KXZ44773.1 (hypothetical protein GPECTOR_62g888 [Gonium pectorale]) HSP 1 Score: 169.5 bits (428), Expect = 1.600e-38 Identity = 108/242 (44.63%), Postives = 143/242 (59.09%), Query Frame = 0 Query: 60 MGRRAAKNAARKGKSDALKTKIYASYGKKLVMAVKAGGPEPDVNRALAVLIREAKAQGVPTDNVQRAIQRGSSANEVDYKEAVYEAYGYGGAGIIINCLTDNTNRAKTEINNVIKKSSVKLGTVGSVSYNFERKGRLDLAGMMDEDSVLEAALEADVEEVDTKTNEEENTTS----VWVDAASVSGLREVLLERGVEI--KASTLVNVPKALVDCSDEDFEGNMNVIEALEELDDVDSVEHN 296 MGRRAAK A RKGKSDA K KIY GKK++ KAGG + N AL L+R+AK GVP D V+R ++R + A + DY+E YEAYG GG G+I+ CLTDN NR +E+ I K+ K+ GSV +NF R G + + G +ED+V EAA+EA ++V+ EEE S V+V + S + L G + + S LV A V+ DE F ++E L ELDDVD+V N Sbjct: 1 MGRRAAKIALRKGKSDAKKAKIYGRIGKKIIQLAKAGGADTTTNAALDTLLRQAKDLGVPKDVVERNLKRATDAKQGDYQEVTYEAYGPGGTGLIVFCLTDNLNRTASEVKPTITKAGAKVAEPGSVMFNFSRCGCIVVDG-TNEDAVFEAAMEAGADDVEPVPAEEEGAASTSYKVFVPVEAFSSTKATLKGLGFSVNEEDSDLVFKAAAPVEVDDESFSRCEALVEKLLELDDVDNVFTN 241
BLAST of NO17G01930 vs. NCBI_GenBank
Match: XP_009037481.1 (hypothetical protein AURANDRAFT_14447, partial [Aureococcus anophagefferens] >EGB08128.1 hypothetical protein AURANDRAFT_14447, partial [Aureococcus anophagefferens]) HSP 1 Score: 166.4 bits (420), Expect = 1.400e-37 Identity = 95/221 (42.99%), Postives = 145/221 (65.61%), Query Frame = 0 Query: 86 GKKLVMAVKAGGPEPDVNRALAVLIREAKAQGVPTDNVQRAIQRGSSANE-VDYKEAVYEAYGYGGAGIIINCLTDNTNRAKTEINNVIKKSSVKLGTVGSVSYNFERKGRLDLAGMMDEDSVLEAALEADVEEV-------DTKTNEEENTTSVWVDAASVSGLREVLLERGVEIKASTLVNVPKA--LVDCSDEDFEGNMNVIEALEELDDVDSVEHNV 297 GKK+ +AV+AGGP+PD NRAL ++I+EA+A V + V R I+ S + D+KE YE Y +GGAG++IN L+DN NRA +++ V+KK+++KL GSV +NF +KGR+ + +DED+ +E ALEADV+EV D +++ EE + V V+ + ++ L + G LV+ P A LV+C ++D E N+ V++ L E+DDVD+VEHN+ Sbjct: 4 GKKIKVAVRAGGPDPDSNRALGLIIKEAQALNVKREIVDRNIKAASEGKDGADFKELTYELYLHGGAGVVINALSDNNNRAFSDVGTVVKKANLKLAESGSVLHNFLKKGRITVIADLDEDAAIELALEADVDEVEVVAPDADMRSDGEEVKSVVLVEPGDLGAMQSALSDAGYAC-VGNLVHEPIAGTLVECGEDDLEKNLLVLDKLAEVDDVDTVEHNI 223
BLAST of NO17G01930 vs. NCBI_GenBank
Match: WP_088205967.1 (YebC/PmpR family DNA-binding transcriptional regulator [Chlamydiales bacterium SCGC AG-110-P3] >SCA63182.1 Probable transcriptional regulatory protein pc1328 [Chlamydiales bacterium SCGC AG-110-P3]) HSP 1 Score: 164.9 bits (416), Expect = 4.100e-37 Identity = 90/232 (38.79%), Postives = 143/232 (61.64%), Query Frame = 0 Query: 70 RKGKSDALKTKIYASYGKKLVMAVKAGGPEPDVNRALAVLIREAKAQGVPTDNVQRAIQRGSSANEVDYKEAVYEAYGYGGAGIIINCLTDNTNRAKTEINNVIKKSSVKLGTVGSVSYNFERKGRLDL-AGMMDEDSVLEAALEADVEEVDTKTNEEENTTSVWVDAASVSGLREVLLERGVEIKASTLVNVPKALVDCSDEDFEGNMNVIEALEELDDVDSVEHNVAMED 301 RKG++DA K KI++ K+++ AVK GGP+P +N L + I++AK VPTDNV+R I++ + A++V Y + YE YG+GG GII+ +TDN NR +E+ K+ G+V++NF+RKG + + ED + AA EA E+ DT E+++ V D + + + L ER I+++ L +PK VDCS +D E N+ +++ LE+L+DV +V HN+ + D Sbjct: 13 RKGRADAKKGKIFSQCAKEIIAAVKMGGPDPKMNPRLRLAIQKAKQNNVPTDNVERNIKKAAGADDVHYDDVTYEIYGHGGVGIIVEAMTDNKNRTASEMRIATNKNGGTSAISGAVAFNFDRKGIIQINKSNAIEDELFMAATEAGAEDFDT---EDDDVFVVVTDPVELFAVHDRLAEREYSIESANLDMIPKTYVDCSSKDVEANLKLVDWLEDLEDVSNVYHNMNVAD 241
BLAST of NO17G01930 vs. NCBI_GenBank
Match: WP_020370889.1 (MULTISPECIES: YebC/PmpR family DNA-binding transcriptional regulator [Chlamydia] >EPP35337.1 DNA-binding regulatory , YebC/PmpR family protein [Chlamydia psittaci 10_1398_11] >EQM62926.1 hypothetical protein H359_0247 [Chlamydia ibidis 10-1398/6]) HSP 1 Score: 163.3 bits (412), Expect = 1.200e-36 Identity = 93/235 (39.57%), Postives = 146/235 (62.13%), Query Frame = 0 Query: 65 AKNAARKGKSDALKTKIYASYGKKLVMAVKAGGPEPDVNRALAVLIREAKAQGVPTDNVQRAIQRGSSANEVDYKEAVYEAYGYGGAGIIINCLTDNTNRAKTEINNVIKKSSVKLGTVGSVSYNFERKGRLDLAGMMDEDSVLEAALEADVEEV--DTKTNEEENTTSVWVDAASVSGLREVLLERGVEIKASTLVNVPKALVDCSDEDFEGNMNVIEALEELDDVDSVEHNVA 298 A RK ++D K KI++ K+L+ AVK GGP+P N L ++I++AK Q +P +N++R +++ SSA++ +++ YE YGYGG GII+ +TDN NR +++ + K L GSV YNF RKG A + +DS+ E+AL + V EV D ++E+ + + ++ ++E LL RG+ L+ VP LVDCS+ED + N+++IE LE++DDVD V HN+A Sbjct: 8 ANTKYRKERADHKKGKIFSRTIKELISAVKMGGPDPKSNARLRMIIQKAKDQNIPNENIERNLKKASSADQKNFETVTYELYGYGGVGIIVEAMTDNKNRTASDMRIAVNKRGGALVEPGSVLYNFIRKG----ACYVSKDSIDESALLSHVVEVGADDLDTDDEDHFIILCEPTDLAAVKEKLLSRGITCSEEKLIYVPLRLVDCSEEDGQSNLSLIEWLEQIDDVDDVFHNMA 238
BLAST of NO17G01930 vs. NCBI_GenBank
Match: WP_011458385.1 (YebC/PmpR family DNA-binding transcriptional regulator [Chlamydia felis] >Q253C8.1 RecName: Full=Probable transcriptional regulatory protein CF0838 >BAE81610.1 conserved hypothetical protein [Chlamydia felis Fe/C-56]) HSP 1 Score: 162.2 bits (409), Expect = 2.600e-36 Identity = 90/234 (38.46%), Postives = 143/234 (61.11%), Query Frame = 0 Query: 65 AKNAARKGKSDALKTKIYASYGKKLVMAVKAGGPEPDVNRALAVLIREAKAQGVPTDNVQRAIQRGSSANEVDYKEAVYEAYGYGGAGIIINCLTDNTNRAKTEINNVIKKSSVKLGTVGSVSYNFERKGRLDL-AGMMDEDSVLEAALEADVEEVDTKTNEEENTTSVWVDAASVSGLREVLLERGVEIKASTLVNVPKALVDCSDEDFEGNMNVIEALEELDDVDSVEHNVA 298 A RK ++D + KI++ K+L+ AVK GGP+P N L V+I++AK Q +P++N++R +++ SSA++ ++++ YE YGYGG GII+ +TDN NR +++ + K L GSV YNF RKG + +DE ++L +E E++D N++E V D +S ++E L+ GV L+ VP +VDC ++D E N+ +IE LE++DDVD V HN+A Sbjct: 8 ANTKYRKERADHKRGKIFSRTIKELISAVKMGGPDPKTNARLRVIIQKAKDQNIPSENIERNLKKASSADQKNFEDVTYELYGYGGVGIIVEAMTDNKNRTASDMRIAVNKRGGSLVEPGSVLYNFSRKGACYVPKNSIDEAALLSHVIEVGAEDLD---NDDEEHFVVLCDPVDLSSVKEQLVALGVTCTEEKLIYVPLRVVDCDEKDGEANLALIEWLEKIDDVDEVYHNMA 238
BLAST of NO17G01930 vs. NCBI_GenBank
Match: XP_005847266.1 (hypothetical protein CHLNCDRAFT_52504 [Chlorella variabilis] >EFN55164.1 hypothetical protein CHLNCDRAFT_52504 [Chlorella variabilis]) HSP 1 Score: 160.2 bits (404), Expect = 1.000e-35 Identity = 100/242 (41.32%), Postives = 143/242 (59.09%), Query Frame = 0 Query: 60 MGRRAAKNAARKGKSDALKTKIYASYGKKLVMAVKAGGPEPDVNRALAVLIREAKAQGVPTDNVQRAIQRGSSANEVDYKEAVYEAYGYGGAGIIINCLTDNTNRAKTEINNVIKKSSVKLGTVGSVSYNFERKGRLDLAGMMDEDSVLEAALEADVEEVDTKTNEEENTTSVWVDAA--SVSGLREVLLERGVEI--KASTLVNVPKALVDCSDEDFEGNMNVIEALEELDDVDSVEHNVA 298 MGRR+AK A RKGK+DA K+K+Y GK++ AV+ GGP+ N L + AK VP D + R I+R +S ++ DY E YEAYG GG G +I CLTDN NR+ +++ I K+ K+ GSV +NF+R+G + + G ED+V EAA+EA ++ T+E+ V A + L E+G+++ +AS LV VP + DE FEGN ++E L +DDVD+V VA Sbjct: 1 MGRRSAKIATRKGKADAQKSKLYGKIGKQIAQAVRQGGPDALGNLRLRDALAAAKMAQVPVDIIDRNIKR-ASESKADYTEMTYEAYGIGGTGFVIECLTDNINRSASDVKAAITKAGGKVADPGSVLFNFQRQGLVMVDGSEGEDAVFEAAMEAGAADIQQHTDEDGAVVGFKVLTAVEDYGAVSSSLAEQGLKLQPEASGLVYVPLVQQEVDDEQFEGNEALLERLLAVDDVDAVYTTVA 241
BLAST of NO17G01930 vs. NCBI_GenBank
Match: KOO53831.1 (upf0082 protein pc1328 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 159.8 bits (403), Expect = 1.300e-35 Identity = 90/245 (36.73%), Postives = 141/245 (57.55%), Query Frame = 0 Query: 60 MGRRAAKNAARKGKSDALKTKIYASYGKKLVMAVKAGGPEPDVNRALAVLIREAKAQGVPTDNVQRAIQRGSSANEVDYKEAVYEAYGYGGAGIIINCLTDNTNRAKTEINNVIKKSSVKLGTVGSVSYNFERKGRLDLAGMMDEDSVLEAALEADVE--------EVDTKTNEEENTTSVWVDAASVSGLREVLLERGVEIKASTLVNVPKALVDCSDEDFEGNMNVIEALEELDDVDSVEHNV 297 MGR+ N R K+ K + GKK+V+AVK+GG +P +NR LA ++ EA A VP D ++ ++R + Y+E YE YG+GG G+II CLTDN NRA ++ KK++ K+ GSV++NF+R+GR+ + + ++ +LE A+EA E + + + + E+ + + + L+ L E+G + LV VP + CS+ED E N I+ L+E+DDV SVEHN+ Sbjct: 1 MGRKFENNKLRMAKTALAYAKKASYIGKKVVIAVKSGGGDPTINRQLAAVMAEANALNVPKDVIKNNVKRALDKDTSSYEELTYEVYGHGGVGLIIGCLTDNKNRAVERVSTAAKKANCKVAASGSVAFNFQRRGRIAINTALSDEQLLELAIEAGCEGDVTLEAPDTEVRGDSEDVKCVAFTEVEELGKLQAALQEKG-HACSGMLVYVPSTTIACSEEDSEANYKYIDMLDEIDDVSSVEHNM 244 The following BLAST results are available for this feature:
BLAST of NO17G01930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G01930 ID=NO17G01930|Name=NO17G01930|organism=Nannochloropsis oceanica|type=gene|length=1697bpback to top protein sequence of NO17G01930.1 >NO17G01930.1-protein ID=NO17G01930.1-protein|Name=NO17G01930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=306bpback to top Synonyms
Publications
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