NO17G01930, NO17G01930 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G01930 vs. NCBI_GenBank
Match: EWM24242.1 (Transcriptional regulator TACO1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 413.3 bits (1061), Expect = 6.500e-112 Identity = 227/307 (73.94%), Postives = 261/307 (85.02%), Query Frame = 0 Query: 6 GCLALALILCLSLVQAFLLPSPTAP-----CPSSAATSRATNV---FEQLQPYRSSRINRLYMGRRAAKNAARKGKSDALKTKIYASYGKKLVMAVKAGGPEPDVNRALAVLIREAKAQGVPTDNVQRAIQRGSSANEVDYKEAVYEAYGYGGAGIIINCLTDNTNRAKTEINNVIKKSSVKLGTVGSVSYNFERKGRLDLAGMMDEDSVLEAALEADVEEVDTKTNEEENTTSVWVDAASVSGLREVLLERGVEIKASTLVNVPKALVDCSDEDFEGNMNVIEALEELDDVDSVEHNVAMEDEDEG 305 GC+ + I+ LS QAF LPS P P A + + NV Q QP R +RINRL+MGRRAAKNAARKGKSDALKTK+YA+YGKKLVMAVKAGGP+P+VNRALAV+IREAKAQGVP+DNVQRAIQRGS+ANE DYKEAVYEAYGYGGAG+IINCLTDNTNRAKTEI+NVIKK+ VKL T GSV++NF+RKGR+DLAG+++ED+VLEAALEADVE+VDT+ NEEE TSV VD ASVS LREV L +G EIKAS +VNVPK L+DCSDEDFEGNM+VIEALEELDDVDSVEHNVAM++ +EG Sbjct: 11 GCMFVVFIISLSPGQAFFLPSCRPPEAATSAPGILADTMSGNVCLPLRQPQP-RCNRINRLFMGRRAAKNAARKGKSDALKTKVYATYGKKLVMAVKAGGPDPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADYKEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAFNFDRKGRIDLAGIVEEDAVLEAALEADVEDVDTRVNEEEGVTSVLVDPASVSSLREVFLGKGREIKASLMVNVPKLLMDCSDEDFEGNMSVIEALEELDDVDSVEHNVAMDEGEEG 316
BLAST of NO17G01930 vs. NCBI_GenBank
Match: XP_005852712.1 (hypothetical protein NGA_0690700 [Nannochloropsis gaditana CCMP526] >EKU23121.1 hypothetical protein NGA_0690700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 412.5 bits (1059), Expect = 1.100e-111 Identity = 226/307 (73.62%), Postives = 261/307 (85.02%), Query Frame = 0 Query: 6 GCLALALILCLSLVQAFLLPSPTAP-----CPSSAATSRATNV---FEQLQPYRSSRINRLYMGRRAAKNAARKGKSDALKTKIYASYGKKLVMAVKAGGPEPDVNRALAVLIREAKAQGVPTDNVQRAIQRGSSANEVDYKEAVYEAYGYGGAGIIINCLTDNTNRAKTEINNVIKKSSVKLGTVGSVSYNFERKGRLDLAGMMDEDSVLEAALEADVEEVDTKTNEEENTTSVWVDAASVSGLREVLLERGVEIKASTLVNVPKALVDCSDEDFEGNMNVIEALEELDDVDSVEHNVAMEDEDEG 305 GC+ + I+ LS QAF LPS P P A + + NV Q QP R +R+NRL+MGRRAAKNAARKGKSDALKTK+YA+YGKKLVMAVKAGGP+P+VNRALAV+IREAKAQGVP+DNVQRAIQRGS+ANE DYKEAVYEAYGYGGAG+IINCLTDNTNRAKTEI+NVIKK+ VKL T GSV++NF+RKGR+DLAG+++ED+VLEAALEADVE+VDT+ NEEE TSV VD ASVS LREV L +G EIKAS +VNVPK L+DCSDEDFEGNM+VIEALEELDDVDSVEHNVAM++ +EG Sbjct: 11 GCMFVVFIISLSPGQAFFLPSCRPPEAATSAPGILADTMSGNVCLPLRQPQP-RCNRLNRLFMGRRAAKNAARKGKSDALKTKVYATYGKKLVMAVKAGGPDPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADYKEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAFNFDRKGRIDLAGIVEEDAVLEAALEADVEDVDTRVNEEEGVTSVLVDPASVSSLREVFLGKGREIKASLMVNVPKLLMDCSDEDFEGNMSVIEALEELDDVDSVEHNVAMDEGEEG 316
BLAST of NO17G01930 vs. NCBI_GenBank
Match: GAX21366.1 (hypothetical protein FisN_12Lh070 [Fistulifera solaris]) HSP 1 Score: 210.7 bits (535), Expect = 6.400e-51 Identity = 114/251 (45.42%), Postives = 171/251 (68.13%), Query Frame = 0 Query: 49 PYRSSRINRLYMGRRAAKNAARKGKSDALKTKIYASYGKKLVMAVKAGG-PEPDVNRALAVLIREAKAQGVPTDNVQRAIQRGSSANEVDYKEAVYEAYGYGGAGIIINCLTDNTNRAKTEINNVIKKSSVKLGTVGSVSYNFERKGRLDLAGMMDEDSVLEAALEADVEEVDTKTNEEENTTSVWVDAASVSGLREVLLERGVEIKAS-TLVNVPKALVDCSDEDFEGNMNVIEALEELDDVDSVEHNVA 298 P ++ +L MGR AA A+ K K+D K K A +GKK++MAVK GG P+P+ NRALA ++++AKAQ VP DN+QRAI++ S N D+KE+++EAYG+GGA ++I+ LTDN NRA ++ + + K K+ GSV + ++RKG + + +++E++VLEAA+EA +++ EE TT V+ D + S + + + G E +L+ V KA V+CSDE+FE NM +I+ALEELDDVD VEHN++ Sbjct: 29 PTTTTSTTQLDMGRAAAVRASTKAKTDLRKAKTNAIFGKKIIMAVKQGGSPDPNANRALADVMKQAKAQSVPVDNIQRAIKKASEGNVGDFKESIFEAYGFGGASLVIHVLTDNNNRATADVRSTVSKREGKMAEAGSVLFLYDRKGCVQVPAVLEEEAVLEAAIEAGCSDMELVV--EEGTTRVYTDPSETSNMFQAIQSMGYEQGLEMSLIYVSKAPVECSDEEFEKNMEIIDALEELDDVDRVEHNMS 277
BLAST of NO17G01930 vs. NCBI_GenBank
Match: GAX20223.1 (hypothetical protein FisN_12Hh070 [Fistulifera solaris]) HSP 1 Score: 209.9 bits (533), Expect = 1.100e-50 Identity = 112/240 (46.67%), Postives = 166/240 (69.17%), Query Frame = 0 Query: 60 MGRRAAKNAARKGKSDALKTKIYASYGKKLVMAVKAGG-PEPDVNRALAVLIREAKAQGVPTDNVQRAIQRGSSANEVDYKEAVYEAYGYGGAGIIINCLTDNTNRAKTEINNVIKKSSVKLGTVGSVSYNFERKGRLDLAGMMDEDSVLEAALEADVEEVDTKTNEEENTTSVWVDAASVSGLREVLLERGVEIKAS-TLVNVPKALVDCSDEDFEGNMNVIEALEELDDVDSVEHNVA 298 MGR AA A+ K K+D K K A +GKK++MAVK GG P+P+ NRALA ++++AKAQ VP DN+QRAI++ S N D+KE+++EAYG+GGA ++I+ LTDN NRA ++ + + K K+ GSV + ++RKG + + +++E++VLEAA+EA +++ EE TT V+ D + S + + + G E +L+ V KA V+CSDE+FE NM +I+ALEELDDVD VEHN++ Sbjct: 1 MGRAAAVRASTKAKTDLRKAKTNAIFGKKIIMAVKQGGSPDPNANRALADVMKQAKAQSVPVDNIQRAIKKASEGNVGDFKESIFEAYGFGGASLVIHVLTDNNNRATADVRSTVSKREGKMAEAGSVLFMYDRKGCVQVPAVLEEEAVLEAAIEAGCSDMELVV--EEGTTRVYTDPSETSNMFQAIQSMGYEQGLEMSLIYVSKAPVECSDEEFEKNMEIIDALEELDDVDRVEHNMS 238
BLAST of NO17G01930 vs. NCBI_GenBank
Match: EJK70127.1 (hypothetical protein THAOC_08541 [Thalassiosira oceanica]) HSP 1 Score: 208.8 bits (530), Expect = 2.400e-50 Identity = 114/248 (45.97%), Postives = 171/248 (68.95%), Query Frame = 0 Query: 52 SSRINRLYMGRRAAKNAARKGKSDALKTKIYASYGKKLVMAVKAGG-PEPDVNRALAVLIREAKAQGVPTDNVQRAIQRGSSANEVDYKEAVYEAYGYGGAGIIINCLTDNTNRAKTEINNVIKKSSVKLGTVGSVSYNFERKGRLDLAGMMDEDSVLEAALEADVEEVDTKTNEEENTTSVWVDAASVSGLREVLLERGVEIKAS-TLVNVPKALVDCSDEDFEGNMNVIEALEELDDVDSVEHNVA 298 S R++ L MGR AA AA KGK+DA K K+ A YGKK++MAVK GG P+P NR LA LI+ AK VP DN+ RAI+R + + D+ E+ +EAYG+GGA +IIN L+DN NR+ ++ + + K++ KL GSV + ++ KG++++ +DE+ +L AA++A V++++ +EE T+ V+ D S L + + G+E + +L +V KA V+CS+EDFE NM +I+ALE+LDDVDSVEHN++ Sbjct: 60 SGRVSPLLMGRAAAVRAATKGKTDAKKAKVNAYYGKKIIMAVKQGGSPDPVANRQLAELIKAAKNNSVPVDNINRAIKRATEKDAGDFSESKFEAYGFGGASLIINVLSDNPNRSTADVKSAVNKNNGKLAESGSVLFMYDLKGKVEIPCEVDEEELLMAAIDAGVDDMELVDGDEEGTSIVYTDPKETSLLFDAVKSMGLEEGSKMSLSHVSKAPVECSEEDFEKNMKIIDALEDLDDVDSVEHNMS 307
BLAST of NO17G01930 vs. NCBI_GenBank
Match: XP_002181160.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47083.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 204.1 bits (518), Expect = 6.000e-49 Identity = 114/240 (47.50%), Postives = 158/240 (65.83%), Query Frame = 0 Query: 60 MGRRAAKNAARKGKSDALKTKIYASYGKKLVMAVKAGG-PEPDVNRALAVLIREAKAQGVPTDNVQRAIQRGSSANEVDYKEAVYEAYGYGGAGIIINCLTDNTNRAKTEINNVIKKSSVKLGTVGSVSYNFERKGRLDLAGMMDEDSVLEAALEADVEEVDTKTNEEENTTSVWVDAASVSGLREVLLERGVEIKAS-TLVNVPKALVDCSDEDFEGNMNVIEALEELDDVDSVEHNVA 298 MGR AA AA K K+DA K K A YGKKL+MAVK GG P+P N+ALA +I+ AKA VP DN+ RAI++ S N D+KEA +EAYG+GG +IIN LTDN NRA +++ + K K+ GSV + ++RKG +++ +DE++VLEAA+EA ++ + + E TT ++ D + VS + E L G + A +L V KA V+CSDEDF+ NM++IEALE SVEHN++ Sbjct: 1 MGRAAAVRAATKNKTDAKKAKTNAVYGKKLIMAVKQGGSPDPKANKALADVIKGAKANSVPVDNINRAIKKASEGNVGDFKEATFEAYGFGGVSLIINVLTDNNNRATSDVRTAVNKRDGKIAESGSVLFMYDRKGMIEVQQDLDEEAVLEAAIEAGCDDYELSAGDVEGTTILYTDPSEVSMMFEALKSLGCDAGAKMSLTYVTKAPVECSDEDFDKNMDIIEALEXXXXXXSVEHNMS 240
BLAST of NO17G01930 vs. NCBI_GenBank
Match: XP_002291465.1 (hypothetical protein THAPSDRAFT_34698 [Thalassiosira pseudonana CCMP1335] >EED91572.1 hypothetical protein THAPSDRAFT_34698 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 202.2 bits (513), Expect = 2.300e-48 Identity = 108/240 (45.00%), Postives = 162/240 (67.50%), Query Frame = 0 Query: 60 MGRRAAKNAARKGKSDALKTKIYASYGKKLVMAVKAGG-PEPDVNRALAVLIREAKAQGVPTDNVQRAIQRGSSANEVDYKEAVYEAYGYGGAGIIINCLTDNTNRAKTEINNVIKKSSVKLGTVGSVSYNFERKGRLDLAGMMDEDSVLEAALEADVEEVDTKTNEEENTTSVWVDAASVSGLREVLLERGVEIKAST-LVNVPKALVDCSDEDFEGNMNVIEALEELDDVDSVEHNVA 298 MGR AA AA KGK+DA K K+ A YGKK++MAVK GG +P NR L LI+ AK VP DN+ RAI+R + + D+ EA +EAYG+GGA +IIN L+DN+NR+ ++ + K K+ GSV + ++ KG++++ ++DE+ +L AA++A VE+++ +EE T+ V+ D S + + + G+E + L ++ KA V+C++EDF+ NM +IEALEELDDVDSVEHN++ Sbjct: 1 MGRAAAVRAATKGKTDAKKAKVNAYYGKKIIMAVKQGGSADPIANRQLGELIKAAKQNSVPVDNINRAIKRATEKDAGDFSEATFEAYGFGGASLIINVLSDNSNRSTADVKTAVNKLKGKMAEQGSVLFMYDLKGKIEIPAVVDEEELLMAAIDAGVEDMELVEGDEEGTSIVYTDPKETSAMFDAVKAIGLEEGSKMGLAHISKAPVECTEEDFDKNMAIIEALEELDDVDSVEHNMS 240
BLAST of NO17G01930 vs. NCBI_GenBank
Match: CEL95960.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 200.3 bits (508), Expect = 8.700e-48 Identity = 114/255 (44.71%), Postives = 165/255 (64.71%), Query Frame = 0 Query: 60 MGRRAAKNAARKGKSDALKTKIYASYGKKLVMAVKAGGPEPDVNRALAVLIREAKAQGVPTDNVQRAIQRGSSANEVDYKEAVYEAYGYGGAGIIINCLTDNTNRAKTEINNVIKKSSVKLGTVGSVSYNFERKGRL----DLAGMMDEDSVLEAALEADVEEVDTK--------TNEEENTTSV---WV--DAASVSGLREVLLERGVEIKASTLVNVPKALVDCSDEDFEGNMNVIEALEELDDVDSVEHNVA 298 MGRRAAK A +K K +A K+KIY+ YGKK+ A+K GG +P N LA LI+EAKA GVP DN+ R +++ A DY E +YE YG+GG G+++ CLTDNTNRA + + +KK+ K + GSVS+ F + ++ D A +DED V E ALE+ V+++D + N E+ +T V WV S+ LR+ L G+E +++L ++P ALVDCS+E+ E N+ +I+ALE++DDVD VEHN++ Sbjct: 1 MGRRAAKVAEKKAKGEAAKSKIYSRYGKKIAGAIKTGGSDPLNNMELASLIKEAKAAGVPKDNIDRLLKKADDA--PDYTEVIYEVYGHGGVGMLVTCLTDNTNRAASVVKAAVKKAGGKDASPGSVSFQFTKMAKIEIPEDRAADLDEDKVFEIALESSVDDIDIRPAPLRPDIENNEDGSTPVPPKWVLTTPNSLKALRDALEANGIE-GSTSLAHIPNALVDCSEEELEKNLGLIDALEDIDDVDMVEHNIS 252
BLAST of NO17G01930 vs. NCBI_GenBank
Match: CBN73974.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 190.7 bits (483), Expect = 6.900e-45 Identity = 103/234 (44.02%), Postives = 149/234 (63.68%), Query Frame = 0 Query: 64 AAKNAARKGKSDALKTKIYASYGKKLVMAVKAGGPEPDVNRALAVLIREAKAQGVPTDNVQRAIQRGSSANEVDYKEAVYEAYGYGGAGIIINCLTDNTNRAKTEINNVIKKSSVKLGTVGSVSYNFERKGRLDLAGMMDEDSVLEAALEADVEEVDTKTNEEENTTSVWVDAASVSGLREVLLERGVEIKASTLVNVPKALVDCSDEDFEGNMNVIEALEELDDVDSVEHNVA 298 AAK A KG+ DA + K +A GKK++MAVKAGGP D N+ LA I+EAK VP DN+ RAI+R ++ D+KE +YEAYG+GG G+++ LTDN NRA ++ V KK +K GSV + FE++GR+++ G +DE+ V+EAA+EA V++V+ + E T+ + + L L E G+ + L +P L D DE E N+ +EAL EL+DVD+V+HN+A Sbjct: 74 AAKIAKVKGREDAKRGKAFARIGKKIIMAVKAGGPNEDTNKQLADTIKEAKHNSVPKDNIARAIKRAVDGSQGDFKEVIYEAYGHGGTGMVVTALTDNVNRAIADVKAVWKKQGLKQAAQGSVLFQFEKRGRVEVQGEVDEEQVIEAAIEAGVDDVEVVEGDHEGTSWILTTPKDLMTLTGALSEAGITGETG-LALIPSGLADVDDEAMELNLAAVEALLELEDVDTVDHNMA 306
BLAST of NO17G01930 vs. NCBI_GenBank
Match: XP_005771919.1 (hypothetical protein EMIHUDRAFT_65618 [Emiliania huxleyi CCMP1516] >EOD19490.1 hypothetical protein EMIHUDRAFT_65618 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 180.6 bits (457), Expect = 7.100e-42 Identity = 108/245 (44.08%), Postives = 150/245 (61.22%), Query Frame = 0 Query: 60 MGRRAAKNAARKGKSDALKTKIYASYGKKLVMAVKAGGPEPDVNRALAVLIREAKAQGVPTDNVQRAIQRGSSANEVDYKEAVYEAYGYGGAGIIINCLTDNTNRAKTEINNVIKKSSVKLGTVGSVSYNFERKGRLDLAGMMDEDSVLEAALEAD------VEEVDTKTNEEENTTSVWVDAASVSGLREVLLERGVEIKASTLVNVPKALVDCSDEDFEGNMNVIEALEELDDVDSVEHNVAM 299 MGR+ N + K+ K + GKK+V+AVKAGG +P +NR LA ++ EA A VP D V + I+R + +Y E YEAYG+GG G++INCL+DN NRA +E+N VI K+ K+ + GSV +NF KGRL +A +DEDS+L+ A+EA +E D + + E V +AA + ++ L G + + LVNVP A + S ED E N VI+ LEELDDVDSVEHN+A+ Sbjct: 2 MGRKFENNKLKMAKTALAYAKKASYIGKKVVVAVKAGGDDPSINRQLAAVMAEANALNVPKDVVTKNIKRAMDTDTANYDELTYEAYGHGGVGLVINCLSDNKNRAVSEVNMVINKNGCKVASQGSVLFNFSPKGRLVVAKPLDEDSLLDIAIEAGCDGDVLLEPPDAEADGEAARAVVLTEAAELGAVQGALQGAGYDC-SGKLVNVPLAPQEVSAEDEEANFGVIDKLEELDDVDSVEHNMAL 245 The following BLAST results are available for this feature:
BLAST of NO17G01930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G01930 ID=NO17G01930|Name=NO17G01930|organism=Nannochloropsis oceanica|type=gene|length=1697bpback to top protein sequence of NO17G01930.1 >NO17G01930.1-protein ID=NO17G01930.1-protein|Name=NO17G01930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=306bpback to top Synonyms
Publications
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