NO17G01760, NO17G01760 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G01760 vs. NCBI_GenBank
Match: EWM24255.1 (putative chloroplastic-like protein [Nannochloropsis gaditana]) HSP 1 Score: 387.9 bits (995), Expect = 2.800e-104 Identity = 206/268 (76.87%), Postives = 231/268 (86.19%), Query Frame = 0 Query: 21 TQGFVGPLKPATS-TTKLSVSFLGNGSSKKGSASKGVLVVGATGKTGKRVVEILQRKGTKVAAGVRDLAKGEETLGRPSGKLSFLEVDVVADSPASLIEKVAGYSAVICATGYSPSGPIDILGPYKVDNKGTIKLAEALVAAGVPKMVLVSSLLTNGWEAGQGLNKNFIILNLFGGVLAAKNNAERKIMKST-LDYTIVRPGGLKEAAPEGQIRYGKADTIFGGSISRYSVAEVCVAALTSKSASNKVVEIVAEPDAAKLSIEQGFAS 287 T+ F+ LK + S +KLSVSF G+ KK +KGVLVVGATGKTGKR+VE+L +KG KV AGVRDLAKGEE LG+ KLSFLEVDVVADSPA+L EKV YSAVICATGYSPSGPID+LGPYKVDN GT KLAEALVAAGVPKMVLVSSLLTNGW AGQGLNKN+IILNLFGGVL AKN AERKIM +T LD+TIVRPGGL+E+ PEG+++YGKADT+FGGSISRYSVAEVCVAAL SK+AS K+VEIV+E DA KL+ EQGFAS Sbjct: 23 TEAFMSGLKQSGSPASKLSVSFFNAGNDKKVGGNKGVLVVGATGKTGKRIVEVLLKKGRKVTAGVRDLAKGEEALGKAGNKLSFLEVDVVADSPATLAEKVTDYSAVICATGYSPSGPIDLLGPYKVDNMGTTKLAEALVAAGVPKMVLVSSLLTNGWAAGQGLNKNYIILNLFGGVLVAKNTAERKIMATTGLDWTIVRPGGLRESPPEGRVKYGKADTLFGGSISRYSVAEVCVAALDSKAASRKIVEIVSEGDAPKLTFEQGFAS 290
BLAST of NO17G01760 vs. NCBI_GenBank
Match: XP_022926365.1 (uncharacterized protein At2g34460, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 193.7 bits (491), Expect = 7.700e-46 Identity = 118/243 (48.56%), Postives = 149/243 (61.32%), Query Frame = 0 Query: 46 SSKKGSASKGVLVVGATGKTGKRVVEILQRKGTKVAAGVRDLAKGEETLGRPSGKLSFLEVDVVADSPASLIEKVAGYS-AVICATGYSPSGPIDILGPYKVDNKGTIKLAEALVAAGVPKMVLVSSLLTNGWEAGQGLNKNFIILNLFGGVLAAKNNAERKIMKSTLDYTIVRPGGLKEAAPEGQIRYGKADTIFGGSISRYSVAEVCVAALTSKSASNKVVEIVAEPDAAKLSIEQGFASV 288 + K+ A + + V GA+G TGKR+VE L +G V AGVRD++K + TL + L ++ DV S A L E + S AVICATG+ P D+ P+K+DN GT+ L EA G+ + VLVSS+L NG GQ LN +I LN+FG L AK AER I KS +DYTI+RPGGLK P G + DT++ GSISR VAEV V AL AS KVVEIV+ DA KLS E F S+ Sbjct: 62 AEKQNDARRKIFVAGASGSTGKRIVEQLLARGFAVKAGVRDVSKAKATLSPDNPALQIVKADVTEGS-AKLAEAIGSDSEAVICATGFRPGW--DLFAPWKIDNFGTVNLVEACRELGINRFVLVSSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAERHIRKSGIDYTIIRPGGLKNEPPTGNLVMAAEDTLYEGSISRDLVAEVAVEALVRPEASYKVVEIVSRADAPKLSYEDLFGSI 301
BLAST of NO17G01760 vs. NCBI_GenBank
Match: XP_023518768.1 (uncharacterized protein At2g34460, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 193.7 bits (491), Expect = 7.700e-46 Identity = 117/243 (48.15%), Postives = 149/243 (61.32%), Query Frame = 0 Query: 46 SSKKGSASKGVLVVGATGKTGKRVVEILQRKGTKVAAGVRDLAKGEETLGRPSGKLSFLEVDVVADSPASLIEKVAGYS-AVICATGYSPSGPIDILGPYKVDNKGTIKLAEALVAAGVPKMVLVSSLLTNGWEAGQGLNKNFIILNLFGGVLAAKNNAERKIMKSTLDYTIVRPGGLKEAAPEGQIRYGKADTIFGGSISRYSVAEVCVAALTSKSASNKVVEIVAEPDAAKLSIEQGFASV 288 + K+ A + + V GA+G TGKR+VE L +G V AGVRD++K + TL + L ++ DV S A L E + S AVICATG+ P D+ P+K+DN GT+ L EA G+ + VL+SS+L NG GQ LN +I LN+FG L AK AER I KS +DYTI+RPGGLK P G + DT++ GSISR VAEV V AL AS KVVEIV+ DA KLS E F S+ Sbjct: 64 AEKQNDARRKIFVAGASGSTGKRIVEQLLARGFAVKAGVRDVSKAKATLSTDNPALQIVKADVTEGS-AKLAEAIGSDSEAVICATGFRPGW--DLFAPWKIDNFGTVNLVEACRELGINRFVLISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAERHIRKSGIDYTIIRPGGLKNEPPTGNLVMAAEDTLYEGSISRDLVAEVAVEALVRPEASYKVVEIVSRADAPKLSYEDLFGSI 303
BLAST of NO17G01760 vs. NCBI_GenBank
Match: KFK36337.1 (hypothetical protein AALP_AA4G109600 [Arabis alpina]) HSP 1 Score: 192.2 bits (487), Expect = 2.200e-45 Identity = 120/246 (48.78%), Postives = 151/246 (61.38%), Query Frame = 0 Query: 43 GNGSSKKGSASKGVLVVGATGKTGKRVVEILQRKGTKVAAGVRDLAKGEETLGRPSGKLSFLEVDVVADSPASLIEKVAGYS-AVICATGYSPSGPIDILGPYKVDNKGTIKLAEALVAAGVPKMVLVSSLLTNGWEAGQGLNKNFIILNLFGGVLAAKNNAERKIMKSTLDYTIVRPGGLKEAAPEGQIRYGKADTIFGGSISRYSVAEVCVAALTSKSASNKVVEIVAEPDAAKLSIEQGFASV 288 G S + G+ +K V V GATGKTGKR+VE L +G V AGVRD+ K +T + L F+ D V + P L E + S AVICA+G+ P D+ P+KVDN GT+ L +A GV + VL+SS+L NG GQ LN +I +N+FG L AK AE+ I KS ++YTIVRPGGLK P G + DT++ GSISR VAEV V +L AS KVVEIVA PDA K S + FASV Sbjct: 39 GQASEENGAKTKKVFVAGATGKTGKRIVEQLLSRGFSVKAGVRDVEKA-KTSFKDDPSLQFVRAD-VTEGPEKLAEAIGDDSQAVICASGFRPG--FDLFAPWKVDNFGTVNLVDACRKQGVNRFVLISSILVNGAAMGQILNPAYIFINVFGLTLVAKLQAEKYIKKSGINYTIVRPGGLKNDPPTGNVVMEPEDTLYEGSISRDQVAEVAVESLLHDEASFKVVEIVARPDAPKHSYKDLFASV 280
BLAST of NO17G01760 vs. NCBI_GenBank
Match: XP_007158934.1 (hypothetical protein PHAVU_002G194000g [Phaseolus vulgaris] >ESW30928.1 hypothetical protein PHAVU_002G194000g [Phaseolus vulgaris]) HSP 1 Score: 191.4 bits (485), Expect = 3.800e-45 Identity = 116/237 (48.95%), Postives = 143/237 (60.34%), Query Frame = 0 Query: 52 ASKGVLVVGATGKTGKRVVEILQRKGTKVAAGVRDLAKGEETLGRPSGKLSFLEVDVVADSPASLIEKVAGYS-AVICATGYSPSGPIDILGPYKVDNKGTIKLAEALVAAGVPKMVLVSSLLTNGWEAGQGLNKNFIILNLFGGVLAAKNNAERKIMKSTLDYTIVRPGGLKEAAPEGQIRYGKADTIFGGSISRYSVAEVCVAALTSKSASNKVVEIVAEPDAAKLSIEQGFASV 288 A + + V GATG TGKR+VE L KG V AGVRDL K TL + L ++ D V + P L E + S AVICATG+ P D+L P+KVDN GT+ L EA V + +L+SS+L NG GQ LN +I LN+FG L AK AE I KS ++YTI+RPGGL+ P G + DT++ GSISR VAEV V AL AS KVVEIV+ PDAAK S F S+ Sbjct: 55 AERKIFVAGATGSTGKRIVEQLLAKGFSVKAGVRDLDKARSTLSSANPSLQIVKAD-VTEGPDKLAEAIGDDSEAVICATGFRPGW--DLLAPWKVDNFGTVNLVEACRKRNVNRFILISSILVNGASMGQLLNPAYIFLNVFGLTLVAKLQAENYIRKSGINYTIIRPGGLRNDPPTGNVVMEPEDTLYEGSISRDHVAEVAVEALAYPEASYKVVEIVSRPDAAKRSYHDLFGSI 288
BLAST of NO17G01760 vs. NCBI_GenBank
Match: XP_023003801.1 (uncharacterized protein At2g34460, chloroplastic-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 191.4 bits (485), Expect = 3.800e-45 Identity = 116/243 (47.74%), Postives = 149/243 (61.32%), Query Frame = 0 Query: 46 SSKKGSASKGVLVVGATGKTGKRVVEILQRKGTKVAAGVRDLAKGEETLGRPSGKLSFLEVDVVADSPASLIEKVAGYS-AVICATGYSPSGPIDILGPYKVDNKGTIKLAEALVAAGVPKMVLVSSLLTNGWEAGQGLNKNFIILNLFGGVLAAKNNAERKIMKSTLDYTIVRPGGLKEAAPEGQIRYGKADTIFGGSISRYSVAEVCVAALTSKSASNKVVEIVAEPDAAKLSIEQGFASV 288 + K+ +A + + V GA+G TGKR+VE L +G V AGVRD++K + TL + L ++ DV S A L E + S AVICATG+ P D+ P+K+DN GT+ L EA G+ + VL+SS+L NG GQ LN +I LN+FG L AK AER I KS +DYTI+RPGGLK P G + DT++ GSISR VAEV V AL AS KVVEIV+ DA KL E F S+ Sbjct: 11 AEKQNNARRKIFVAGASGSTGKRIVEQLLARGFAVKAGVRDVSKAKATLSPDNPALQIVKADVTEGS-AKLAEAIGSDSEAVICATGFRPGW--DLFAPWKIDNFGTVNLVEACRELGINRFVLISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAERHIRKSGIDYTIIRPGGLKNEHPTGNLIMAAEDTLYEGSISRDLVAEVAVEALVRPEASYKVVEIVSRADAPKLPYEDLFGSI 250
BLAST of NO17G01760 vs. NCBI_GenBank
Match: XP_023003800.1 (uncharacterized protein At2g34460, chloroplastic-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 191.4 bits (485), Expect = 3.800e-45 Identity = 116/243 (47.74%), Postives = 149/243 (61.32%), Query Frame = 0 Query: 46 SSKKGSASKGVLVVGATGKTGKRVVEILQRKGTKVAAGVRDLAKGEETLGRPSGKLSFLEVDVVADSPASLIEKVAGYS-AVICATGYSPSGPIDILGPYKVDNKGTIKLAEALVAAGVPKMVLVSSLLTNGWEAGQGLNKNFIILNLFGGVLAAKNNAERKIMKSTLDYTIVRPGGLKEAAPEGQIRYGKADTIFGGSISRYSVAEVCVAALTSKSASNKVVEIVAEPDAAKLSIEQGFASV 288 + K+ +A + + V GA+G TGKR+VE L +G V AGVRD++K + TL + L ++ DV S A L E + S AVICATG+ P D+ P+K+DN GT+ L EA G+ + VL+SS+L NG GQ LN +I LN+FG L AK AER I KS +DYTI+RPGGLK P G + DT++ GSISR VAEV V AL AS KVVEIV+ DA KL E F S+ Sbjct: 62 AEKQNNARRKIFVAGASGSTGKRIVEQLLARGFAVKAGVRDVSKAKATLSPDNPALQIVKADVTEGS-AKLAEAIGSDSEAVICATGFRPGW--DLFAPWKIDNFGTVNLVEACRELGINRFVLISSILVNGAAMGQILNPAYIFLNVFGLTLIAKLQAERHIRKSGIDYTIIRPGGLKNEHPTGNLIMAAEDTLYEGSISRDLVAEVAVEALVRPEASYKVVEIVSRADAPKLPYEDLFGSI 301
BLAST of NO17G01760 vs. NCBI_GenBank
Match: ABK25008.1 (unknown [Picea sitchensis]) HSP 1 Score: 189.9 bits (481), Expect = 1.100e-44 Identity = 115/245 (46.94%), Postives = 150/245 (61.22%), Query Frame = 0 Query: 43 GNGSSKKGSASKGVLVVGATGKTGKRVVEILQRKGTKVAAGVRDLAKGEETLGRPSGKLSFLEVDVVADSPASLIEKVAGYSAVICATGYSPSGPIDILGPYKVDNKGTIKLAEALVAAGVPKMVLVSSLLTNGWEAGQGLNKNFIILNLFGGVLAAKNNAERKIMKSTLDYTIVRPGGLKEAAPEGQIRYGKADTIFGGSISRYSVAEVCVAALTSKSASNKVVEIVAEPDAAKLSIEQGFASV 288 G G + +K V V GATG TGKR+V L KG V AGVRD+ + + + F++ D V + A L E + AVICATG+ PS +D L P+KVDN GT+ L +A + GV K++L+SS+L NG GQ N +I+LN+FG L AK AE+ I KS +D+TIVRPGGL+ P G I DT+F GSISR VAEV V AL AS KVVEIV+ +A K S+++ FAS+ Sbjct: 44 GQGEPNEQRTTKTVFVAGATGNTGKRIVTQLLSKGFNVKAGVRDVDSAKNNFPTDT-NIQFVKAD-VTEGAAKLSEAIGDAEAVICATGFRPS--LDFLAPWKVDNFGTVNLVDACRSIGVNKLILISSILVNGAAIGQLFNPAYIVLNVFGLTLVAKLQAEQYIRKSGIDFTIVRPGGLRNDPPSGNIVMQAEDTLFEGSISRDQVAEVAVEALLYPEASYKVVEIVSRENAPKKSLQELFASI 284
BLAST of NO17G01760 vs. NCBI_GenBank
Match: XP_021723117.1 (uncharacterized protein At2g34460, chloroplastic-like [Chenopodium quinoa]) HSP 1 Score: 189.9 bits (481), Expect = 1.100e-44 Identity = 123/264 (46.59%), Postives = 153/264 (57.95%), Query Frame = 0 Query: 25 VGPLKPATSTTKLSVSFLGNGSSKKGSASKGVLVVGATGKTGKRVVEILQRKGTKVAAGVRDLAKGEETLGRPSGKLSFLEVDVVADSPASLIEKVAGYS-AVICATGYSPSGPIDILGPYKVDNKGTIKLAEALVAAGVPKMVLVSSLLTNGWEAGQGLNKNFIILNLFGGVLAAKNNAERKIMKSTLDYTIVRPGGLKEAAPEGQIRYGKADTIFGGSISRYSVAEVCVAALTSKSASNKVVEIVAEPDAAKLSIEQGFASV 288 + P+ + TK+ S + GS K + V GATG TGKR+VE L KG V AGVRD K + S L ++ DV S L E ++ S A+ICATG+ S D+L P+KVD GT+ L EA GV + +L+SS+L NG GQ LN +I LN+FG VL AK AE I KS ++YTIVRPGGLK P G I DT+ GGSISR VAEV V AL AS KVVEI+A PDA K S E+ F ++ Sbjct: 31 IHPISFSVKATKMEESEIKEVGEAGGSTQKKIFVAGATGSTGKRIVEQLLAKGYSVKAGVRDFEKAKTAFSTNSA-LEIVKADVTEGSD-KLAEAISDDSEALICATGFQRSW--DLLAPWKVDYYGTLNLVEACRKRGVKRFILISSILVNGAAMGQLLNPAYIFLNVFGLVLVAKLQAENYIRKSGINYTIVRPGGLKNDPPSGNIIMEPEDTLSGGSISRDQVAEVAVEALNHPEASYKVVEIIASPDAPKRSFEELFGAI 290
BLAST of NO17G01760 vs. NCBI_GenBank
Match: XP_017405978.1 (PREDICTED: uncharacterized protein At2g34460, chloroplastic [Vigna angularis] >KOM25949.1 hypothetical protein LR48_Vigan205s008600 [Vigna angularis] >BAT74144.1 hypothetical protein VIGAN_01175000 [Vigna angularis var. angularis]) HSP 1 Score: 189.5 bits (480), Expect = 1.400e-44 Identity = 118/256 (46.09%), Postives = 149/256 (58.20%), Query Frame = 0 Query: 33 STTKLSVSFLGNGSSKKGSASKGVLVVGATGKTGKRVVEILQRKGTKVAAGVRDLAKGEETLGRPSGKLSFLEVDVVADSPASLIEKVAGYS-AVICATGYSPSGPIDILGPYKVDNKGTIKLAEALVAAGVPKMVLVSSLLTNGWEAGQGLNKNFIILNLFGGVLAAKNNAERKIMKSTLDYTIVRPGGLKEAAPEGQIRYGKADTIFGGSISRYSVAEVCVAALTSKSASNKVVEIVAEPDAAKLSIEQGFASV 288 S K+ S + + A + + V GATG TGKR+VE L KG V AGVRDL K + TL + L ++ DV S L E + S AV+CATG+ P D+L P+KVDN GT+ L EA V + +L+SS+L NG GQ LN +I LN+FG L AK AE I KS ++YTI+RPGGL+ P G + DT++ GSISR VAEV V AL AS KVVEIV+ PDAAK S F S+ Sbjct: 36 SFAKMEGSEISEEVGEDSRAKRKIFVAGATGSTGKRIVEQLLAKGFSVKAGVRDLDKAKSTLSSANPSLQIIKADVTEGSD-KLAEAIGDDSEAVVCATGFRPGW--DLLAPWKVDNFGTVNLVEACRKRNVKRFILISSILVNGASMGQLLNPAYIFLNVFGLTLVAKLQAENYIRKSGINYTIIRPGGLRNDPPTGNVVMEPEDTLYEGSISRDQVAEVAVEALAYPEASYKVVEIVSRPDAAKRSYHDLFGSI 288 The following BLAST results are available for this feature:
BLAST of NO17G01760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G01760 ID=NO17G01760|Name=NO17G01760|organism=Nannochloropsis oceanica|type=gene|length=2330bpback to top protein sequence of NO17G01760.1 >NO17G01760.1-protein ID=NO17G01760.1-protein|Name=NO17G01760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=288bpback to top Synonyms
Publications
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