NO17G01660, NO17G01660 (gene) Nannochloropsis oceanica

Overview
NameNO17G01660
Unique NameNO17G01660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1747
Alignment locationchr17:486528..488274 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:486528..488274 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO17G01660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G01660.1NO17G01660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G01660.1NO17G01660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G01660 ID=NO17G01660|Name=NO17G01660|organism=Nannochloropsis oceanica|type=gene|length=1747bp
ATGTCCTCGTCAACCGAGACTGCTAAAGCCACACGACTGGATGTGGCCGC
GCGGAAGGAGCTGCAGATAACACTGGAGTTCCAATGTGTAAAGTGTTGTC
TATCCAAGCGACTGGCGCCAGgttggcatccgacagtgaaaactgtcctg
ctagaaaccctggagcgacagattcggagcacttccgagattgtcgtgcg
aggatcactcctggtgaatgttgcattggtacctcagtcgtccagTCGAG
GAACAGGTGGCTCTTCCGAAGCTGGATCAAAGCTTCGTCACCGCCTGCTT
CACTCCTGGGCTGGAGGTTCGACCCGGCCGAGCGTGGAACGAGGGATACC
GCGGGGTCATCAAGGAGGTGTTTCAGGATAAATTTACCAATTATCCGTTC
ATCCACCGTAGCCCGGGCGACTACCAATCCATCACCGTGGTGGCACAGCT
ATACATCACAAATATAACAGCGTCGACATGGACCCCGTTTGTGGGGAGAC
AACTCGATTACGTGCGATTCTGGCTACGAGAGCATGGATTGGAGTCCCCG
GACGTTTCAGCAAAGCGTGTCCAATGCCTCATCAATGGCTGGATTACACC
GCGCACCGACAACCAGGCAGGCGCTGGAGGAGGAGGAACAGGAGGAGGAG
GAGGAGGAGGAGCTCTAAAAGTGACAGCAACTGCAAGAGCGGGAGCATCA
GCCACGGCAGCAAGCACAGCAGCAACAGCAGCAGCGGCACGAGCAGCAGC
AAGAGTGGCAGCAGCTAGAGCAAGAGAAGAGGCACGAGCACGAGCATCGG
CAGGAGGGAGGTGTGGGAAGGGGGGGGGAGGTGGTGGACGTCCTGTGGGG
CAGATCCCGGATGAGGTCCAGGATTTCATCAACGAGGAACGGCGGCTTCT
TAGGCTGGAGGGTTCCACCCGTTTGGACGTGAATGAGAAGACCCCAGTGG
AAGGGCTCCTCCTCCCGTATCTGTACCACATTTTGTACCAGTATCACCAA
ATGCATCCGGCGGTACTGGCGGTACAAGAAGGGATGGGGGACAAACCTGA
GATGCAGGCCGAGCACGGAGGGAATCCTGGCTATCGGGCGTTTACCATCG
CTCCAATCTGCAGTATCAAGCGCCATTTCATGACGCTCGATACCAGAGCT
CTTGGTGATCTGCTGAAGAACGTGATGCGACGCAGACCCACCGCGATGAC
CAAGGAGGCATGGAGCGAAGCATGCCCCGATTGGTTGAGGCGACTGGGAG
GGATGAGCCCTAAAAGGTTTTGCCGGGATGCGGTTTCGGTGAAGGAGATG
TGGGACGAGACTTTCCGGGTGGGGGGCCTACGAAACCAGCGGGTGTTTCA
CAATCGGGTTTCCACGGATGGTGTCTCGGTGTCGGTCTTCTTTCACGTGG
CGAAGGAGAGACTGAAGAGGGAGAAAGCGGAGAGGGTCAGAGTGGAGAAG
GAGGACGAGGAGAAGGAGATGCTGGAACGTCAGCAGGGGCAGGAAAACCT
GCAGCCAGTCAGAGAGCGACGCATTGTCGCGATCGATCCCGGTCGCGTCA
ACCTGGTCACGGCGTTGGACTCGCAGACTGGTAAGATCAAGACCTTGACG
CGTCGTGCGTACTACGGAAAGCGGCGGATCAACGAGTGCAAGAGAAAGTT
TAGCTTTTGGGAGGACGCACTCGGTGACATCAATGCCGCCTTTTCGAGGA
CCACGATGAAGACTGTCCCGACTTGCGTAGCGCTTACAGGGAGCTGA
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protein sequence of NO17G01660.1

>NO17G01660.1-protein ID=NO17G01660.1-protein|Name=NO17G01660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=541bp
MSSSTETAKATRLDVAARKELQITLEFQCVKCCLSKRLAPVEEQVALPKL
DQSFVTACFTPGLEVRPGRAWNEGYRGVIKEVFQDKFTNYPFIHRSPGDY
QSITVVAQLYITNITASTWTPFVGRQLDYVRFWLREHGLESPDVSAKRVQ
CLINGWITPRTDNQAGAGGGGTGGGGGGGALKVTATARAGASATAASTAA
TAAAARAAARVAAARAREEARARASAGGRCGKGGGGGGRPVGQIPDEVQD
FINEERRLLRLEGSTRLDVNEKTPVEGLLLPYLYHILYQYHQMHPAVLAV
QEGMGDKPEMQAEHGGNPGYRAFTIAPICSIKRHFMTLDTRALGDLLKNV
MRRRPTAMTKEAWSEACPDWLRRLGGMSPKRFCRDAVSVKEMWDETFRVG
GLRNQRVFHNRVSTDGVSVSVFFHVAKERLKREKAERVRVEKEDEEKEML
ERQQGQENLQPVRERRIVAIDPGRVNLVTALDSQTGKIKTLTRRAYYGKR
RINECKRKFSFWEDALGDINAAFSRTTMKTVPTCVALTGS*
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Synonyms
Publications