NO17G01510, NO17G01510 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO17G01510 vs. NCBI_GenBank
Match: WP_106255866.1 (hypothetical protein [Leptolyngbya frigida] >PSB30693.1 hypothetical protein C7B82_08460 [Leptolyngbya frigida ULC18]) HSP 1 Score: 80.9 bits (198), Expect = 1.100e-11 Identity = 35/100 (35.00%), Postives = 65/100 (65.00%), Query Frame = 0 Query: 83 VSLRSLKDVSADSAFLEAQVIDWLDNEWIPQDCHKEVARLAAGAYIKARDDGIHDLGGVLLHVGTELEDMDMGDAFVDAWTVANKVSDLLLVRMGREVCC 183 ++L ++ + +L A ++ WL+ E+IP+D + ++A+ AA +++ R +G +DLG +++ + TE+E D ++F +TVAN VSDLLL +G + CC Sbjct: 8 ITLPPARNPVQEGEWLRAALLQWLNQEFIPEDANWQIAKRAAQIFVRQRMEGENDLGSLVMAIVTEMESFDFSNSFFGEFTVANAVSDLLLDSLGIDRCC 107
BLAST of NO17G01510 vs. NCBI_GenBank
Match: WP_015153567.1 (MULTISPECIES: hypothetical protein [Cyanobacteria] >AFY87019.1 hypothetical protein Chro_1495 [Chroococcidiopsis thermalis PCC 7203] >OWY67515.1 hypothetical protein B7486_31075 [cyanobacterium TDX16] >PSB45134.1 hypothetical protein C7B80_18090 [Cyanosarcina cf. burmensis CCALA 770] >PSB62880.1 hypothetical protein C7B79_16235 [Chroococcidiopsis cubana CCALA 043] >PSM47111.1 hypothetical protein C7Y66_21400 [Chroococcidiopsis sp. CCALA 051]) HSP 1 Score: 79.0 bits (193), Expect = 4.100e-11 Identity = 35/100 (35.00%), Postives = 62/100 (62.00%), Query Frame = 0 Query: 83 VSLRSLKDVSADSAFLEAQVIDWLDNEWIPQDCHKEVARLAAGAYIKARDDGIHDLGGVLLHVGTELEDMDMGDAFVDAWTVANKVSDLLLVRMGREVCC 183 V+L KD + +L A + WLD E++P+ +++++R AA +++ R +G +DLG + + + TE+++ D +F + VAN VSDLLL +G + CC Sbjct: 8 VTLPPAKDPLQEGEWLRAALQQWLDTEFLPEPANQQISRRAAQIFVRQRMEGENDLGSLAIAIVTEMQEFDFSKSFYSEFAVANAVSDLLLDSLGIDRCC 107
BLAST of NO17G01510 vs. NCBI_GenBank
Match: WP_041237108.1 (hypothetical protein [Cyanothece sp. PCC 7425]) HSP 1 Score: 79.0 bits (193), Expect = 4.100e-11 Identity = 34/100 (34.00%), Postives = 63/100 (63.00%), Query Frame = 0 Query: 83 VSLRSLKDVSADSAFLEAQVIDWLDNEWIPQDCHKEVARLAAGAYIKARDDGIHDLGGVLLHVGTELEDMDMGDAFVDAWTVANKVSDLLLVRMGREVCC 183 ++L ++ +++ +L + WLD E+IP+ ++E+A+ A Y++ R +G +DLG +++ + TELE D +F ++ +AN VSDLLL +G + CC Sbjct: 8 ITLPPCRNPDSEAHWLRTTLQTWLDQEFIPESINQEIAQRATQVYLRQRLEGENDLGALVIALVTELEQFDFSRSFYSSFAIANAVSDLLLQSLGIDTCC 107
BLAST of NO17G01510 vs. NCBI_GenBank
Match: WP_006633845.1 (hypothetical protein [Microcoleus vaginatus] >EGK86853.1 hypothetical protein MicvaDRAFT_3638 [Microcoleus vaginatus FGP-2]) HSP 1 Score: 78.6 bits (192), Expect = 5.300e-11 Identity = 33/100 (33.00%), Postives = 64/100 (64.00%), Query Frame = 0 Query: 83 VSLRSLKDVSADSAFLEAQVIDWLDNEWIPQDCHKEVARLAAGAYIKARDDGIHDLGGVLLHVGTELEDMDMGDAFVDAWTVANKVSDLLLVRMGREVCC 183 ++L K+ + +L+ ++ WLD+E+IP+ ++++A+ AA Y++ R +G +DLG +++ + TE++ D +F + +AN VSDLLL +G + CC Sbjct: 8 ITLPPAKNPEQEGQWLQQTLLAWLDSEFIPEAANQQIAKRAAQIYVRQRMEGENDLGSLVIAIVTEMQAYDFSKSFYGEFAIANAVSDLLLESLGIDKCC 107
BLAST of NO17G01510 vs. NCBI_GenBank
Match: ACL45635.1 (conserved hypothetical protein [Cyanothece sp. PCC 7425]) HSP 1 Score: 78.6 bits (192), Expect = 5.300e-11 Identity = 37/110 (33.64%), Postives = 68/110 (61.82%), Query Frame = 0 Query: 75 TDELSE--DGVSLRSLKDVSADSAFLEAQVIDWLDNEWIPQDCHKEVARLAAGAYIKARDDGIHDLGGVLLHVGTELEDMDMGDAFVDAWTVANKVSDLLLVRMGREVCC 183 ++ LSE ++L ++ +++ +L + WLD E+IP+ ++E+A+ A Y++ R +G +DLG +++ + TELE D +F ++ +AN VSDLLL +G + CC Sbjct: 2 SESLSEPIPSITLPPCRNPDSEAHWLRTTLQTWLDQEFIPESINQEIAQRATQVYLRQRLEGENDLGALVIALVTELEQFDFSRSFYSSFAIANAVSDLLLQSLGIDTCC 111
BLAST of NO17G01510 vs. NCBI_GenBank
Match: XP_003057357.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH59002.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 78.2 bits (191), Expect = 7.000e-11 Identity = 36/90 (40.00%), Postives = 57/90 (63.33%), Query Frame = 0 Query: 93 ADSAFLEAQVIDWLDNEWIPQDCHKEVARLAAGAYIKARDDGIHDLGGVLLHVGTELEDMDMGDAFVDAWTVANKVSDLLLVRMGREVCC 183 A+ A+L + WLD+EW Q+ H+++ AA + R +G ++G +++ V EL D D D FV+A+ VANK S++L++R G EVCC Sbjct: 11 AEIAWLAGMLKLWLDDEWSIQEPHRDLGMRAAEKCTEMRLEGCEEMGSLVMGVAQELIDFDFSDTFVNAFEVANKCSEILMMREGYEVCC 100
BLAST of NO17G01510 vs. NCBI_GenBank
Match: WP_083619988.1 (hypothetical protein [Planktothrix serta] >CUR14330.1 conserved hypothetical protein [Planktothrix serta PCC 8927]) HSP 1 Score: 77.8 bits (190), Expect = 9.100e-11 Identity = 35/106 (33.02%), Postives = 65/106 (61.32%), Query Frame = 0 Query: 83 VSLRSLKDVSADSAFLEAQVIDWLDNEWIPQDCHKEVARLAAGAYIKARDDGIHDLGGVLLHVGTELEDMDMGDAFVDAWTVANKVSDLLLVRMGREVCCPEPEFT 189 ++L +++ + +L+ + WLD ++IP+ ++ +A+ AA YI+ R +G +D+G +++ + TE+E D +F + +AN VSDLLL +G E CC +FT Sbjct: 8 ITLPPSQNLEQEGEWLKQTLHTWLDEQFIPEAVNETIAQRAAQIYIRQRLEGENDVGSLVIAIVTEMESFDFSKSFFGGFAIANAVSDLLLDSLGIERCCGREKFT 113
BLAST of NO17G01510 vs. NCBI_GenBank
Match: WP_015175059.1 (hypothetical protein [Oscillatoria nigro-viridis] >AFZ05735.1 hypothetical protein Osc7112_1188 [Oscillatoria nigro-viridis PCC 7112]) HSP 1 Score: 77.4 bits (189), Expect = 1.200e-10 Identity = 32/100 (32.00%), Postives = 64/100 (64.00%), Query Frame = 0 Query: 83 VSLRSLKDVSADSAFLEAQVIDWLDNEWIPQDCHKEVARLAAGAYIKARDDGIHDLGGVLLHVGTELEDMDMGDAFVDAWTVANKVSDLLLVRMGREVCC 183 ++L K+ + +L+ ++ WLD+E+IP+ ++++A+ AA Y++ R +G +D+G +++ + TE++ D +F + +AN VSDLLL +G + CC Sbjct: 8 ITLPPAKNPEQEGQWLQETLLAWLDSEFIPEAANQQIAKRAAQIYVRQRMEGENDVGSLVIAIVTEMQAYDFSKSFYGEFAIANAVSDLLLESLGIDKCC 107
BLAST of NO17G01510 vs. NCBI_GenBank
Match: WP_006529944.1 (hypothetical protein [Gloeocapsa sp. PCC 73106] >ELR97255.1 hypothetical protein GLO73106DRAFT_00010610 [Gloeocapsa sp. PCC 73106]) HSP 1 Score: 76.6 bits (187), Expect = 2.000e-10 Identity = 32/100 (32.00%), Postives = 65/100 (65.00%), Query Frame = 0 Query: 83 VSLRSLKDVSADSAFLEAQVIDWLDNEWIPQDCHKEVARLAAGAYIKARDDGIHDLGGVLLHVGTELEDMDMGDAFVDAWTVANKVSDLLLVRMGREVCC 183 ++L L++V + +LE + WLD E+IP+ + ++A+ AA +I+ R +G +DLG +++ + TE+++ + ++F + +AN +SDL+L +G + CC Sbjct: 9 ITLPPLRNVEQEKQWLEEALHHWLDQEFIPEAINFKIAQRAAQIFIRQRLEGENDLGSLVIAIITEMQNFNFRESFYSEFAIANAISDLILASLGVDCCC 108
BLAST of NO17G01510 vs. NCBI_GenBank
Match: WP_079679805.1 (hypothetical protein [Planktothrix sp. PCC 11201] >SKB13485.1 conserved hypothetical protein [Planktothrix sp. PCC 11201]) HSP 1 Score: 76.6 bits (187), Expect = 2.000e-10 Identity = 35/107 (32.71%), Postives = 64/107 (59.81%), Query Frame = 0 Query: 83 VSLRSLKDVSADSAFLEAQVIDWLDNEWIPQDCHKEVARLAAGAYIKARDDGIHDLGGVLLHVGTELEDMDMGDAFVDAWTVANKVSDLLLVRMGREVCCPEPEFTD 190 ++L +++ + +L+ + WLD ++IP+ ++ +A+ AA Y++ R +G +D+G ++L + TE+E D +F + +AN VSDLLL +G E CC F D Sbjct: 8 ITLPPSENLQQEGEWLKQTLNRWLDEQFIPEVVNETIAQRAAQIYVRQRMEGENDVGSLVLAIVTEMESFDFSKSFFGEFVIANAVSDLLLDSLGIERCCGRSTFPD 114 The following BLAST results are available for this feature:
BLAST of NO17G01510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G01510 ID=NO17G01510|Name=NO17G01510|organism=Nannochloropsis oceanica|type=gene|length=1764bpback to top protein sequence of NO17G01510.1 >NO17G01510.1-protein ID=NO17G01510.1-protein|Name=NO17G01510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=427bpback to top Synonyms
Publications
|