NO17G01440, NO17G01440 (gene) Nannochloropsis oceanica

Overview
NameNO17G01440
Unique NameNO17G01440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length999
Alignment locationchr17:437891..438889 -

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Properties
Property NameValue
DescriptionAspartate carbamoyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:437891..438889 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006207'de novo' pyrimidine nucleobase biosynthetic process
GO:0006520cellular amino acid metabolic process
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004070aspartate carbamoyltransferase activity
GO:0016597amino acid binding
GO:0016743carboxyl- or carbamoyltransferase activity
GO:0016740transferase activity
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR036901Asp/Orn_carbamoylTrfase_sf
IPR006131Asp_carbamoyltransf_Asp/Orn-bd
IPR006132Asp/Orn_carbamoyltranf_P-bd
IPR002082Asp_carbamoyltransf
IPR006130Asp/Orn_carbamoylTrfase
Homology
[Close]
BLAST of NO17G01440 vs. NCBI_GenBank
Match: XP_005856017.1 (aspartate carbamoyltransferase catalytic subunit, partial [Nannochloropsis gaditana CCMP526] >XP_005856320.1 aspartate carbamoyltransferase catalytic subunit, partial [Nannochloropsis gaditana CCMP526] >EKU20043.1 aspartate carbamoyltransferase catalytic subunit, partial [Nannochloropsis gaditana CCMP526] >EKU20344.1 aspartate carbamoyltransferase catalytic subunit, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 518.1 bits (1333), Expect = 2.100e-143
Identity = 255/312 (81.73%), Postives = 283/312 (90.71%), Query Frame = 0 
Query:   13 TEDPRSWVGQHFLSVTQLSLPALELFLREAEAMKALVAARGGDRRMQGRILGSIFFEPSTRTTSSFQAAFQRLGGSCLHVNESSSSAQKGETLSDTVRSMACYCDLVVVRHPVKGSVRSAAGTCPKPLLNAGDGTGEHPTQSLLDLLTVKLELGEITGKTVALVGDLKHGRTAHSLARLLCLFSGVEIIYVSPESLRMPEEVKEYVGSRGVAQREAFTLDAEVLAETDVLYMTRVQKERFATSADYDEVKDMFRITPQVMKQGKSTLVLMHPLPRVGEIDEEVDRDPRAAYFRQMENGMYARMALVALIVGV 325
            + DP+SWVGQHFLS TQ++LPALEL LREAEAMK LV   GGD R+QGR+LGSIFFEPSTRTTSSFQAAFQRLGGSC+HVNESSSSAQKGETLSDTVRSMACYCD+VV+RHPV+GSVR AA TCPKPLLNAGDGTGEHPTQSLLDLLTVKLE+GEI  KTVA VGDLKHGRTAHS ARLLCLFSG+ +IYVSP+SL MPEEVK+YV SRG+ Q E FTLD +VLA  DVLYMTRVQKERF  +ADY++VKD+FR+TPQ M+  KS+LVLMHPLPRVGEID+ VD+DPRAAYFRQMENGMYARMAL+ALI+GV
Sbjct:   18 SSDPQSWVGQHFLSATQITLPALELLLREAEAMKELVKVHGGDLRLQGRVLGSIFFEPSTRTTSSFQAAFQRLGGSCIHVNESSSSAQKGETLSDTVRSMACYCDVVVLRHPVQGSVREAAMTCPKPLLNAGDGTGEHPTQSLLDLLTVKLEVGEIRNKTVAFVGDLKHGRTAHSFARLLCLFSGIRLIYVSPQSLAMPEEVKKYVDSRGIQQHEYFTLDEDVLATMDVLYMTRVQKERFPRAADYEKVKDIFRVTPQTMQLCKSSLVLMHPLPRVGEIDDRVDQDPRAAYFRQMENGMYARMALIALIMGV 329
[Close]
BLAST of NO17G01440 vs. NCBI_GenBank
Match: EWM24271.1 (aspartate carbamoyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 518.1 bits (1333), Expect = 2.100e-143
Identity = 255/312 (81.73%), Postives = 283/312 (90.71%), Query Frame = 0 
Query:   13 TEDPRSWVGQHFLSVTQLSLPALELFLREAEAMKALVAARGGDRRMQGRILGSIFFEPSTRTTSSFQAAFQRLGGSCLHVNESSSSAQKGETLSDTVRSMACYCDLVVVRHPVKGSVRSAAGTCPKPLLNAGDGTGEHPTQSLLDLLTVKLELGEITGKTVALVGDLKHGRTAHSLARLLCLFSGVEIIYVSPESLRMPEEVKEYVGSRGVAQREAFTLDAEVLAETDVLYMTRVQKERFATSADYDEVKDMFRITPQVMKQGKSTLVLMHPLPRVGEIDEEVDRDPRAAYFRQMENGMYARMALVALIVGV 325
            + DP+SWVGQHFLS TQ++LPALEL LREAEAMK LV   GGD R+QGR+LGSIFFEPSTRTTSSFQAAFQRLGGSC+HVNESSSSAQKGETLSDTVRSMACYCD+VV+RHPV+GSVR AA TCPKPLLNAGDGTGEHPTQSLLDLLTVKLE+GEI  KTVA VGDLKHGRTAHS ARLLCLFSG+ +IYVSP+SL MPEEVK+YV SRG+ Q E FTLD +VLA  DVLYMTRVQKERF  +ADY++VKD+FR+TPQ M+  KS+LVLMHPLPRVGEID+ VD+DPRAAYFRQMENGMYARMAL+ALI+GV
Sbjct:   10 SSDPQSWVGQHFLSATQITLPALELLLREAEAMKELVKVHGGDLRLQGRVLGSIFFEPSTRTTSSFQAAFQRLGGSCIHVNESSSSAQKGETLSDTVRSMACYCDVVVLRHPVQGSVREAAMTCPKPLLNAGDGTGEHPTQSLLDLLTVKLEVGEIRNKTVAFVGDLKHGRTAHSFARLLCLFSGIRLIYVSPQSLAMPEEVKKYVDSRGIQQHEYFTLDEDVLATMDVLYMTRVQKERFPRAADYEKVKDIFRVTPQTMQLCKSSLVLMHPLPRVGEIDDRVDQDPRAAYFRQMENGMYARMALIALIMGV 321
[Close]
BLAST of NO17G01440 vs. NCBI_GenBank
Match: XP_009521009.1 (hypothetical protein PHYSODRAFT_555428 [Phytophthora sojae] >EGZ25721.1 hypothetical protein PHYSODRAFT_555428 [Phytophthora sojae])

HSP 1 Score: 346.7 bits (888), Expect = 8.200e-92
Identity = 174/309 (56.31%), Postives = 230/309 (74.43%), Query Frame = 0 
Query:   18 SWVGQHFLSVTQLSLPALELFLREAEAMKALVAARGGDRRMQGRILGSIFFEPSTRTTSSFQAAFQRLGGSCLHVNESSSSAQKGETLSDTVRSMACYCDLVVVRHPVKGSVRSAAGTCPKPLLNAGDGTGEHPTQSLLDLLTVKLELGE---ITGKTVALVGDLKHGRTAHSLARLLCLFSGVEIIYVSPESLRMPEEVKEYVGSRGVAQREAFTLDAEVLAETDVLYMTRVQKERFATSADYDEVKDMFRITPQVMKQGKSTLVLMHPLPRVGEIDEEVDRDPRAAYFRQMENGMYARMALVALIVG 324
            SW G++ LS+ Q    + +  L  A+ MK +V  +G    ++G++L ++F EPSTRT+SSFQAA +RLGG  + VNE+SSS+QKGETL DT+R + CY D+VV+RHP+KGS   AA    KP+LNAGDG GEHP+Q++LDL T+  ELG+   + GK V +VGDLK+GRT HSL+RLL ++ G    YVSPESL+MP  V + + ++G+ Q E   LD+ V+ +TDVLY+TRVQKERF + ADY+ VKD FRIT   +K  KS +++MHPLPRVGE+ EEVD DPRAAYFRQMENGMY RMAL+AL++G
Sbjct:   14 SWQGENILSIAQFGKQSAQRVLDVADEMKNMVKTQGASDLLKGKLLANVFMEPSTRTSSSFQAAMKRLGGLVVCVNETSSSSQKGETLHDTIRCLECYADVVVLRHPIKGSALVAAEATKKPVLNAGDGVGEHPSQAMLDLYTIHSELGDLENLKGKVVTMVGDLKYGRTVHSLSRLLAMY-GTTFNYVSPESLKMPRYVFDELAAQGIQQNETTDLDS-VINQTDVLYVTRVQKERFESEADYNAVKDSFRITLDTIKDAKSKMIIMHPLPRVGEVAEEVDTDPRAAYFRQMENGMYVRMALLALVLG 320
[Close]
BLAST of NO17G01440 vs. NCBI_GenBank
Match: AHG32307.1 (aspartate carbamoyltransferase [Phytophthora infestans])

HSP 1 Score: 346.7 bits (888), Expect = 8.200e-92
Identity = 174/309 (56.31%), Postives = 230/309 (74.43%), Query Frame = 0 
Query:   18 SWVGQHFLSVTQLSLPALELFLREAEAMKALVAARGGDRRMQGRILGSIFFEPSTRTTSSFQAAFQRLGGSCLHVNESSSSAQKGETLSDTVRSMACYCDLVVVRHPVKGSVRSAAGTCPKPLLNAGDGTGEHPTQSLLDLLTVKLELGE---ITGKTVALVGDLKHGRTAHSLARLLCLFSGVEIIYVSPESLRMPEEVKEYVGSRGVAQREAFTLDAEVLAETDVLYMTRVQKERFATSADYDEVKDMFRITPQVMKQGKSTLVLMHPLPRVGEIDEEVDRDPRAAYFRQMENGMYARMALVALIVG 324
            +W G++ LS+ Q    + +  L  A+ MK +V  +G +  ++G++L ++F EPSTRT+SSFQAA +RLGG  + VNE+SSS+QKGETL DT+R + CY D+VV+RHP+KGS   AA    KP+LNAGDG GEHPTQ++LDL T+  ELG+   + GK V +VGDLK+GRT HSL++LL ++ G    YVSPESL+MP  V + + ++G+ Q E   LD+ V+ +TDVLY+TRVQKERF   ADY+ VKD FRIT   +K  K+ +V+MHPLPRVGEI EEVD DPRAAYFRQMENGMY RMAL+AL++G
Sbjct:   13 AWEGENILSIAQFGKESAQRVLSVADEMKKMVKTQGANDLLKGKLLANVFMEPSTRTSSSFQAAMKRLGGLVVCVNETSSSSQKGETLHDTIRCLECYADVVVLRHPIKGSALVAAEATKKPVLNAGDGVGEHPTQAMLDLYTIYSELGDLEKLKGKVVTMVGDLKYGRTVHSLSKLLAMY-GTTFNYVSPESLKMPRYVYDELAAQGIEQNETTDLDS-VINQTDVLYVTRVQKERFENEADYNAVKDSFRITLDTIKDAKAKMVIMHPLPRVGEIAEEVDNDPRAAYFRQMENGMYVRMALLALVLG 319
[Close]
BLAST of NO17G01440 vs. NCBI_GenBank
Match: GAY03559.1 (aspartate carbamoyltransferase [Pythium insidiosum])

HSP 1 Score: 345.9 bits (886), Expect = 1.400e-91
Identity = 176/307 (57.33%), Postives = 231/307 (75.24%), Query Frame = 0 
Query:   19 WVGQHFLSVTQLSLPALELFLREAEAMKALVAARGGDRRMQGRILGSIFFEPSTRTTSSFQAAFQRLGGSCLHVNESSSSAQKGETLSDTVRSMACYCDLVVVRHPVKGSVRSAAGTCPKPLLNAGDGTGEHPTQSLLDLLTVKLELG--EITGKTVALVGDLKHGRTAHSLARLLCLFSGVEIIYVSPESLRMPEEVKEYVGSRGVAQREAFTLDAEVLAETDVLYMTRVQKERFATSADYDEVKDMFRITPQVMKQGKSTLVLMHPLPRVGEIDEEVDRDPRAAYFRQMENGMYARMALVALIVG 324
            W+G++ LSV Q  + + +  LR A+ MKA+V   G    ++G++L ++F+EPSTRT+ SFQAA  RLGG  + VNESSSS +KGETLSDT++ ++CY D++V+RHPVKGS   AA    KP+LNAGDG GEHPTQ+LLDL T+  E+G  ++ GK V +VGDLK+GRT HSL++LL  F GV + YVSP SL+MP  + E + +RGV+Q E   LD+ V+ ++DVLY+TRVQKERF +  +Y+ VKD F ITP  +   KS+LV+MHPLPRVGEI E VD DPRAAYFRQMENGMY RMAL+AL++G
Sbjct:   14 WIGENILSVEQFGVESAKRVLRVADEMKAMVKRDGSSDLLKGKLLANVFYEPSTRTSCSFQAAMLRLGGLVVSVNESSSSVKKGETLSDTIKCLSCYADVLVLRHPVKGSAAIAAAATEKPVLNAGDGVGEHPTQALLDLYTIVSEMGTTDLRGKVVTMVGDLKNGRTVHSLSKLLAHF-GVTLQYVSPASLQMPRYIVEELAARGVSQHETSDLDS-VVNQSDVLYVTRVQKERFESEDEYNAVKDSFIITPATIANAKSSLVIMHPLPRVGEIAEAVDSDPRAAYFRQMENGMYVRMALLALVLG 318
[Close]
BLAST of NO17G01440 vs. NCBI_GenBank
Match: OWZ15019.1 (Aspartate carbamoyltransferase [Phytophthora megakarya])

HSP 1 Score: 345.5 bits (885), Expect = 1.800e-91
Identity = 172/309 (55.66%), Postives = 229/309 (74.11%), Query Frame = 0 
Query:   18 SWVGQHFLSVTQLSLPALELFLREAEAMKALVAARGGDRRMQGRILGSIFFEPSTRTTSSFQAAFQRLGGSCLHVNESSSSAQKGETLSDTVRSMACYCDLVVVRHPVKGSVRSAAGTCPKPLLNAGDGTGEHPTQSLLDLLTVKLELGE---ITGKTVALVGDLKHGRTAHSLARLLCLFSGVEIIYVSPESLRMPEEVKEYVGSRGVAQREAFTLDAEVLAETDVLYMTRVQKERFATSADYDEVKDMFRITPQVMKQGKSTLVLMHPLPRVGEIDEEVDRDPRAAYFRQMENGMYARMALVALIVG 324
            +W G++ LS+ Q    + +  L  A+ MK +V  +G    ++G++L ++F EPSTRT+SSFQAA +RLGG  + VNE+SSS+QKGETL DT+R + CY D+VV+RHP+KGS   AA    KP+LNAGDG GEHPTQ++LDL T+  ELG+   + GK V +VGDLK+GRT HSL++LL ++ G    YVSPESL+MP  V + + ++G+ Q E   L++ V+ +TDVLY+TRVQKERF   ADY+ VKD FRIT   +K  K+ +++MHPLPRVGEI EEVD DPRAAYFRQMENGMY RMAL+AL++G
Sbjct:   13 AWAGENILSIAQFGTESAQRVLSVADEMKTMVKTQGASDLLKGKLLANVFMEPSTRTSSSFQAAMKRLGGLVVCVNETSSSSQKGETLHDTIRCLECYADVVVLRHPIKGSALVAAEATKKPVLNAGDGVGEHPTQAMLDLYTIYSELGDLQNLKGKVVTMVGDLKYGRTVHSLSKLLAMY-GATFNYVSPESLQMPRYVYDELAAQGIQQHETTDLES-VINQTDVLYVTRVQKERFENEADYNAVKDSFRITLDTIKDAKAKMIIMHPLPRVGEIAEEVDNDPRAAYFRQMENGMYVRMALLALVLG 319
[Close]
BLAST of NO17G01440 vs. NCBI_GenBank
Match: XP_008912338.1 (aspartate carbamoyltransferase [Phytophthora parasitica INRA-310] >ETI36940.1 aspartate carbamoyltransferase [Phytophthora parasitica P1569] >ETK77131.1 aspartate carbamoyltransferase [Phytophthora parasitica] >ETN02301.1 aspartate carbamoyltransferase [Phytophthora parasitica INRA-310] >ETP06766.1 aspartate carbamoyltransferase [Phytophthora parasitica CJ01A1] >ETP34873.1 aspartate carbamoyltransferase [Phytophthora parasitica P10297])

HSP 1 Score: 345.1 bits (884), Expect = 2.400e-91
Identity = 173/309 (55.99%), Postives = 229/309 (74.11%), Query Frame = 0 
Query:   18 SWVGQHFLSVTQLSLPALELFLREAEAMKALVAARGGDRRMQGRILGSIFFEPSTRTTSSFQAAFQRLGGSCLHVNESSSSAQKGETLSDTVRSMACYCDLVVVRHPVKGSVRSAAGTCPKPLLNAGDGTGEHPTQSLLDLLTVKLELGE---ITGKTVALVGDLKHGRTAHSLARLLCLFSGVEIIYVSPESLRMPEEVKEYVGSRGVAQREAFTLDAEVLAETDVLYMTRVQKERFATSADYDEVKDMFRITPQVMKQGKSTLVLMHPLPRVGEIDEEVDRDPRAAYFRQMENGMYARMALVALIVG 324
            +W G++ LS+ Q    + +  L  A+ MK +V  +G +  ++G++L ++F EPSTRT+SSFQAA +RLGG  + VNE+SSS+QKGETL DT+R + CY D+VV+RHP+KGS   AA    KP+LNAGDG GEHPTQ++LDL T+  ELG+   + GK V +VGDLK+GRT HSL++LL ++ G    YVSPESL+MP  V + + ++G+ Q E   L++ V+ +TDVLY+TRVQKERF    DY+ VKD FRIT   +K  KS +V+MHPLPRVGEI EEVD DPRAAYFRQMENGMY RMAL+AL++G
Sbjct:   13 AWEGENILSIAQFGKESAQRVLSVADEMKKMVKTQGANDLLKGKLLANVFMEPSTRTSSSFQAAMKRLGGLVVCVNETSSSSQKGETLHDTIRCLECYADVVVLRHPIKGSALVAAEATKKPVLNAGDGVGEHPTQAMLDLYTIYSELGDLENLKGKVVTMVGDLKYGRTVHSLSKLLAMY-GTTFNYVSPESLKMPRYVYDELAAQGIEQNETTDLES-VINQTDVLYVTRVQKERFENEGDYNAVKDSFRITLDTIKDAKSNMVIMHPLPRVGEIAEEVDNDPRAAYFRQMENGMYVRMALLALVLG 319
[Close]
BLAST of NO17G01440 vs. NCBI_GenBank
Match: XP_012199248.1 (aspartate carbamoyltransferase [Saprolegnia parasitica CBS 223.65] >KDO30067.1 aspartate carbamoyltransferase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 345.1 bits (884), Expect = 2.400e-91
Identity = 178/310 (57.42%), Postives = 231/310 (74.52%), Query Frame = 0 
Query:   18 SWVGQHFLSVTQLSLPALELFLREAEAMKALVAARGGDRRMQGRILGSIFFEPSTRTTSSFQAAFQRLGGSCLHVNESSSSAQKGETLSDTVRSMACYCDLVVVRHPVKGSVRSAAGTCPKPLLNAGDGTGEHPTQSLLDLLTV----KLELGEITGKTVALVGDLKHGRTAHSLARLLCLFSGVEIIYVSPESLRMPEEVKEYVGSRGVAQREAFTLDAEVLAETDVLYMTRVQKERFATSADYDEVKDMFRITPQVMKQGKSTLVLMHPLPRVGEIDEEVDRDPRAAYFRQMENGMYARMALVALIVG 324
            SW G+  LS  QL    +    + A+ MK +VA +GGD  ++G+++ ++FFEPSTRT+ SFQAA  RLGG+ + VNESSSS+QKGETLSDT+R + CY D+ V+RHPVKG+  +AA    KP+LNAGDG GEHPTQ+LLDL T+    KL    +TGK + +VGDLK+GRT HSLA+LL  F+ V + YVSPESL+MP+ + + + + GV Q E   LD+ VLA +DVLY+TRVQKERF T+A+YD VKD F ITP  + + K+T++LMHPLPRV EI  EVD DPRAAYFRQME GMY RMA++AL++G
Sbjct:   10 SWSGKDVLSTEQLYAANVRYLFQVADHMKDMVARQGGDDTLKGKVMANVFFEPSTRTSCSFQAAMLRLGGAVVCVNESSSSSQKGETLSDTMRCLECYADVTVLRHPVKGAAATAAAASRKPVLNAGDGVGEHPTQALLDLYTIYKEAKLSEMNLTGKVITMVGDLKNGRTVHSLAKLLAHFN-VTLNYVSPESLKMPQYIVDGLNAVGVKQHETTDLDS-VLAASDVLYITRVQKERFETAAEYDAVKDSFIITPATLTKAKATMILMHPLPRVNEIAVEVDADPRAAYFRQMEYGMYVRMAILALVLG 317
[Close]
BLAST of NO17G01440 vs. NCBI_GenBank
Match: XP_008610673.1 (aspartate carbamoyltransferase [Saprolegnia diclina VS20] >EQC35911.1 aspartate carbamoyltransferase [Saprolegnia diclina VS20])

HSP 1 Score: 344.7 bits (883), Expect = 3.100e-91
Identity = 178/310 (57.42%), Postives = 230/310 (74.19%), Query Frame = 0 
Query:   18 SWVGQHFLSVTQLSLPALELFLREAEAMKALVAARGGDRRMQGRILGSIFFEPSTRTTSSFQAAFQRLGGSCLHVNESSSSAQKGETLSDTVRSMACYCDLVVVRHPVKGSVRSAAGTCPKPLLNAGDGTGEHPTQSLLDLLTV----KLELGEITGKTVALVGDLKHGRTAHSLARLLCLFSGVEIIYVSPESLRMPEEVKEYVGSRGVAQREAFTLDAEVLAETDVLYMTRVQKERFATSADYDEVKDMFRITPQVMKQGKSTLVLMHPLPRVGEIDEEVDRDPRAAYFRQMENGMYARMALVALIVG 324
            SW G+  LS  QL    +    + A+ MK +VA +GGD  ++G+++ ++FFEPSTRT+ SFQAA  RLGG+ + VNESSSS+QKGETLSDT+R + CY D+ V+RHPVKG+  +AA    KP+LNAGDG GEHPTQ+LLDL T+    KL    +TGK + +VGDLK+GRT HSLA+LL  F+ V + YVSPESL+MP  + + + + GV Q E   LD+ VLA +DVLY+TRVQKERF T+A+YD VKD F ITP  + + K+T++LMHPLPRV EI  EVD DPRAAYFRQME GMY RMA++AL++G
Sbjct:   10 SWSGKGVLSTEQLHAANVRYLFQVADHMKDMVARQGGDDTLKGKVMANVFFEPSTRTSCSFQAAMLRLGGAVVCVNESSSSSQKGETLSDTMRCLECYADVTVLRHPVKGAAATAAAASRKPVLNAGDGVGEHPTQALLDLYTIYKEAKLSEMNLTGKVITMVGDLKNGRTVHSLAKLLAHFN-VTLNYVSPESLKMPRYIVDELNAVGVKQHETADLDS-VLAASDVLYITRVQKERFETAAEYDAVKDSFIITPATLTKAKATMILMHPLPRVNEIAVEVDADPRAAYFRQMEYGMYVRMAILALVLG 317
[Close]
BLAST of NO17G01440 vs. NCBI_GenBank
Match: XP_002904952.1 (aspartate carbamoyltransferase [Phytophthora infestans T30-4] >EEY53334.1 aspartate carbamoyltransferase [Phytophthora infestans T30-4])

HSP 1 Score: 344.7 bits (883), Expect = 3.100e-91
Identity = 173/309 (55.99%), Postives = 230/309 (74.43%), Query Frame = 0 
Query:   18 SWVGQHFLSVTQLSLPALELFLREAEAMKALVAARGGDRRMQGRILGSIFFEPSTRTTSSFQAAFQRLGGSCLHVNESSSSAQKGETLSDTVRSMACYCDLVVVRHPVKGSVRSAAGTCPKPLLNAGDGTGEHPTQSLLDLLTVKLELGE---ITGKTVALVGDLKHGRTAHSLARLLCLFSGVEIIYVSPESLRMPEEVKEYVGSRGVAQREAFTLDAEVLAETDVLYMTRVQKERFATSADYDEVKDMFRITPQVMKQGKSTLVLMHPLPRVGEIDEEVDRDPRAAYFRQMENGMYARMALVALIVG 324
            +W G++ LS+ Q    + +  L  A+ MK +V  +G +  ++G++L ++F EPSTRT+SSFQAA +RLGG  + VNE+SSS+QKGETL DT+R + CY D+VV+RHP+KGS   AA    KP+LNAGDG GEHPTQ++LDL T+  ELG+   + GK V +VGDLK+GRT HSL++LL ++ G    YVSPESL+MP  V + + ++G+ Q E   L++ V+ +TDVLY+TRVQKERF   ADY+ VKD FRIT   +K  K+ +V+MHPLPRVGEI EEVD DPRAAYFRQMENGMY RMAL+AL++G
Sbjct:   13 AWEGENILSIAQFGKESAQRVLSVADEMKKMVKTQGANDLLKGKLLANVFMEPSTRTSSSFQAAMKRLGGLVVCVNETSSSSQKGETLHDTIRCLECYADVVVLRHPIKGSALVAAEATKKPVLNAGDGVGEHPTQAMLDLYTIYSELGDLEKLKGKVVTMVGDLKYGRTVHSLSKLLAMY-GTTFNYVSPESLKMPRYVYDELAAQGIEQNETTDLNS-VINQTDVLYVTRVQKERFENEADYNAVKDSFRITLDTIKDAKAKMVIMHPLPRVGEIAEEVDNDPRAAYFRQMENGMYVRMALLALVLG 319
The following BLAST results are available for this feature:
BLAST of NO17G01440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005856017.12.100e-14381.73aspartate carbamoyltransferase catalytic subunit, ... [more]
EWM24271.12.100e-14381.73aspartate carbamoyltransferase [Nannochloropsis ga... [more]
XP_009521009.18.200e-9256.31hypothetical protein PHYSODRAFT_555428 [Phytophtho... [more]
AHG32307.18.200e-9256.31aspartate carbamoyltransferase [Phytophthora infes... [more]
GAY03559.11.400e-9157.33aspartate carbamoyltransferase [Pythium insidiosum... [more]
OWZ15019.11.800e-9155.66Aspartate carbamoyltransferase [Phytophthora megak... [more]
XP_008912338.12.400e-9155.99aspartate carbamoyltransferase [Phytophthora paras... [more]
XP_012199248.12.400e-9157.42aspartate carbamoyltransferase [Saprolegnia parasi... [more]
XP_008610673.13.100e-9157.42aspartate carbamoyltransferase [Saprolegnia diclin... [more]
XP_002904952.13.100e-9155.99aspartate carbamoyltransferase [Phytophthora infes... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002932NSK002932Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G01440.1NO17G01440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599870gene_7744Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100020g58gene6206Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G01440.1NO17G01440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G01440 ID=NO17G01440|Name=NO17G01440|organism=Nannochloropsis oceanica|type=gene|length=999bp
ATGGCGATGGAGGGCGAGCTGACACCGGCGGCCTTGACGGAGGACCCTCG
TTCATGGGTCGGTCAACATTTTCTATCCGTCACGCAGCTTTCCTTGCCCG
CTTTGGAACTATTCTTGCGGGAGGCTGAAGCCATGAAGGCGCTTGTGGCC
GCCCGGGGCGGGGACCGAAGGATGCAAGGGCGCATCCTCGGCAGTATTTT
TTTCGAACCGTCGACGCGAACCACGTCATCCTTTCAAGCGGCCTTCCAGC
GTTTGGGGGGCAGTTGCTTGCATGTGAACGAGTCATCCTCGAGCGCGCAG
AAGGGCGAGACACTGAGCGACACTGTCCGGTCCATGGCCTGCTACTGCGA
CCTGGTGGTGGTGCGCCATCCAGTTAAGGGAAGCGTGCGCTCGGCGGCAG
GCACCTGTCCCAAACCTCTGTTGAACGCGGGGGACGGGACGGGTGAGCAC
CCCACGCAGTCTCTTCTGGACCTGCTGACTGTGAAGCTGGAGCTTGGAGA
AATCACGGGCAAGACTGTGGCGCTGGTAGGGGACCTAAAGCATGGACGCA
CGGCACATTCCTTGGCACGATTGCTCTGCTTATTCAGTGGTGTCGAGATA
ATATATGTGAGCCCTGAGTCGTTGAGAATGCCGGAGGAAGTGAAGGAGTA
CGTGGGCAGCCGCGGCGTGGCCCAGCGTGAGGCTTTTACGCTGGATGCCG
AGGTGTTGGCGGAGACGGATGTGCTTTACATGACGCGCGTGCAGAAGGAG
CGGTTTGCAACGAGTGCTGATTATGATGAGGTGAAGGACATGTTTAGGAT
TACCCCACAAGTGATGAAGCAGGGCAAGAGCACGTTGGTGCTGATGCATC
CTTTACCACGCGTGGGTGAGATCGACGAGGAGGTAGATCGCGACCCGCGC
GCAGCTTACTTCAGGCAGATGGAGAATGGGATGTATGCGCGTATGGCATT
GGTGGCATTGATTGTGGGGGTGCCCACGTTTCCGGCAGATTCTTCTTAA
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protein sequence of NO17G01440.1

>NO17G01440.1-protein ID=NO17G01440.1-protein|Name=NO17G01440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=333bp
MAMEGELTPAALTEDPRSWVGQHFLSVTQLSLPALELFLREAEAMKALVA
ARGGDRRMQGRILGSIFFEPSTRTTSSFQAAFQRLGGSCLHVNESSSSAQ
KGETLSDTVRSMACYCDLVVVRHPVKGSVRSAAGTCPKPLLNAGDGTGEH
PTQSLLDLLTVKLELGEITGKTVALVGDLKHGRTAHSLARLLCLFSGVEI
IYVSPESLRMPEEVKEYVGSRGVAQREAFTLDAEVLAETDVLYMTRVQKE
RFATSADYDEVKDMFRITPQVMKQGKSTLVLMHPLPRVGEIDEEVDRDPR
AAYFRQMENGMYARMALVALIVGVPTFPADSS*
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Synonyms
Publications