NO17G01430, NO17G01430 (gene) Nannochloropsis oceanica

Overview
NameNO17G01430
Unique NameNO17G01430
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1575
Alignment locationchr17:435788..437362 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:435788..437362 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO17G01430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G01430.1NO17G01430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599871gene_7745Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G01430.1NO17G01430.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G01430 ID=NO17G01430|Name=NO17G01430|organism=Nannochloropsis oceanica|type=gene|length=1575bp
ATGGAGGCGGGGAGCGACTGGAGTTATCAGATGTACCAGCAAGTGATGGG
AGGGTTTTTGAGGGGCGAGGGGCTGGAGGGGGAAGGGTCGGGTTGCATTC
GTTTTCATTTGTCGGATTTGAGCGGGGAGGGGCCAAGTAAGATGGTGAGG
CCGTTGCCGAGCTTGAATCAGGTGCAGCGATGGGGGAGGCAAAATTCGAT
TGCGGGGTCGTATTTATTTGCTGTGGATGATCAGACTCCGTACCGGGAGG
AGGTATTGTACTTTGAGTTGATGCCGTTTACGATTGCGGAGATGGATCGG
TATTTAGTGAGGGATGTAGTGTTGCATGACGCTAGGTTGCGGAAGAGGGC
AGGAAGGAGACTGCAGCAGGTAAGAGCGGGGGAGGAAGGGGTAGAGGTCG
AGGCGGTGGGAGTAAGGATGAATGGGAATGGAGGAAGCGGGGCTGAAGGA
GCAGGAGAAGGAAGAGGGATAAGTCGTGGCTTTTGTCGGGCCCAGGGAAA
GAGCTTCAAGGCGGTTTGGACCGAGTTTTTGCCGCCGGCAAAGGCTAAGC
GGCCCGCTTACACGAAGCAAAAAGATGAAAAGGACGAGGGCGAGGGACGA
GGGGAGAAAGAGAAGAGAAAATCGACGGAAGAGCCTACGGCGGAAATTGC
GGGGGATGAGGAGGAAGAGCTGCCGCTGGTGCTGTCGGTGCTAGTGCCGA
GAGAGGGCACAGCGGGCGACCTGCTCGTGGCGATGGAGGAGGCTTTAGGG
TTAGGGTCGGGAGGCAAAGAAGGGCAGAGGGAAGCGGAGGGGGAGGACCT
CAATTTGGAGCTGGAGCTGTTGGACACGAATCATTGCAAGGTTCGGAAAG
TTTATGAAGAGGACAGTCCTGTGCGGGATTTGCCTGAAACCCCACTGACG
GCCCGAGGGGGGATCATTGGATCAGGGACTCTTTTGAAAGCAGTCGTGCA
TGCCCTAGACCGCCAAGAACGACATCTGACCCAACTCCTTCGCTCTCAGA
AGGAAGGAGGTGCGAAAGCGGAAGCAGTTGAGAGCGAGGTCAAGCCCGAC
TCCACCCCTTCCGTCTCTTCCTCCTCCTTTGAGACCCTCCTCCCCCTCCA
AATTAACTTCCTCAACATGGGAGCAGACCAGCCCCGACCTCTCCACAACG
CCCCCACCACTCTACTCGGCACCATCCACCCTGTCGGTCTACCACTCCTA
ACCGCCCTTTTTGGCACTGATTCCTGGGAGGACTTCCTTGCTCGTCTTGC
AGGCAAGGTGGGTCGTCCTGTAGAAACTTTGAAAAATTGGACGCCTGTTT
TGGAGCTCGGCAAAAAACTCTATCACTTGCCTATGCAGGTGCAGGAGGAG
GGGGAGAAAGGGAAAGGGTCGTTTTTGAGGGCACTTGTCAGTACTTACGG
CGAGGGGGTGAAGGATTTTGTGGGGAAGAGCACGCGGTGTAGTGGGTTGG
AGAAGCTGCCGACTTTGACGTTTCTGGCGGCGGAGCCCGTAGGCGTGCGT
CCAGACCAGCTCATGGGGGGGATCCACAGGCGGTCGCGGCGGGCGGAGCA
GGGGATTAGGATTCGACAGGGTTAG
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protein sequence of NO17G01430.1

>NO17G01430.1-protein ID=NO17G01430.1-protein|Name=NO17G01430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=525bp
MEAGSDWSYQMYQQVMGGFLRGEGLEGEGSGCIRFHLSDLSGEGPSKMVR
PLPSLNQVQRWGRQNSIAGSYLFAVDDQTPYREEVLYFELMPFTIAEMDR
YLVRDVVLHDARLRKRAGRRLQQVRAGEEGVEVEAVGVRMNGNGGSGAEG
AGEGRGISRGFCRAQGKSFKAVWTEFLPPAKAKRPAYTKQKDEKDEGEGR
GEKEKRKSTEEPTAEIAGDEEEELPLVLSVLVPREGTAGDLLVAMEEALG
LGSGGKEGQREAEGEDLNLELELLDTNHCKVRKVYEEDSPVRDLPETPLT
ARGGIIGSGTLLKAVVHALDRQERHLTQLLRSQKEGGAKAEAVESEVKPD
STPSVSSSSFETLLPLQINFLNMGADQPRPLHNAPTTLLGTIHPVGLPLL
TALFGTDSWEDFLARLAGKVGRPVETLKNWTPVLELGKKLYHLPMQVQEE
GEKGKGSFLRALVSTYGEGVKDFVGKSTRCSGLEKLPTLTFLAAEPVGVR
PDQLMGGIHRRSRRAEQGIRIRQG*
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Synonyms
Publications