NO17G01430.1, NO17G01430.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO17G01430.1
Unique NameNO17G01430.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1575
Alignment locationchr17:435788..437362 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:435788..437362 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO17G01430.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G01430NO17G01430Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO17G01430.1NO17G01430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO17G01430.1.cds1NO17G01430.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO17G01430.1 ID=NO17G01430.1|Name=NO17G01430.1|organism=Nannochloropsis oceanica|type=mRNA|length=1575bp
ATGGAGGCGGGGAGCGACTGGAGTTATCAGATGTACCAGCAAGTGATGGG
AGGGTTTTTGAGGGGCGAGGGGCTGGAGGGGGAAGGGTCGGGTTGCATTC
GTTTTCATTTGTCGGATTTGAGCGGGGAGGGGCCAAGTAAGATGGTGAGG
CCGTTGCCGAGCTTGAATCAGGTGCAGCGATGGGGGAGGCAAAATTCGAT
TGCGGGGTCGTATTTATTTGCTGTGGATGATCAGACTCCGTACCGGGAGG
AGGTATTGTACTTTGAGTTGATGCCGTTTACGATTGCGGAGATGGATCGG
TATTTAGTGAGGGATGTAGTGTTGCATGACGCTAGGTTGCGGAAGAGGGC
AGGAAGGAGACTGCAGCAGGTAAGAGCGGGGGAGGAAGGGGTAGAGGTCG
AGGCGGTGGGAGTAAGGATGAATGGGAATGGAGGAAGCGGGGCTGAAGGA
GCAGGAGAAGGAAGAGGGATAAGTCGTGGCTTTTGTCGGGCCCAGGGAAA
GAGCTTCAAGGCGGTTTGGACCGAGTTTTTGCCGCCGGCAAAGGCTAAGC
GGCCCGCTTACACGAAGCAAAAAGATGAAAAGGACGAGGGCGAGGGACGA
GGGGAGAAAGAGAAGAGAAAATCGACGGAAGAGCCTACGGCGGAAATTGC
GGGGGATGAGGAGGAAGAGCTGCCGCTGGTGCTGTCGGTGCTAGTGCCGA
GAGAGGGCACAGCGGGCGACCTGCTCGTGGCGATGGAGGAGGCTTTAGGG
TTAGGGTCGGGAGGCAAAGAAGGGCAGAGGGAAGCGGAGGGGGAGGACCT
CAATTTGGAGCTGGAGCTGTTGGACACGAATCATTGCAAGGTTCGGAAAG
TTTATGAAGAGGACAGTCCTGTGCGGGATTTGCCTGAAACCCCACTGACG
GCCCGAGGGGGGATCATTGGATCAGGGACTCTTTTGAAAGCAGTCGTGCA
TGCCCTAGACCGCCAAGAACGACATCTGACCCAACTCCTTCGCTCTCAGA
AGGAAGGAGGTGCGAAAGCGGAAGCAGTTGAGAGCGAGGTCAAGCCCGAC
TCCACCCCTTCCGTCTCTTCCTCCTCCTTTGAGACCCTCCTCCCCCTCCA
AATTAACTTCCTCAACATGGGAGCAGACCAGCCCCGACCTCTCCACAACG
CCCCCACCACTCTACTCGGCACCATCCACCCTGTCGGTCTACCACTCCTA
ACCGCCCTTTTTGGCACTGATTCCTGGGAGGACTTCCTTGCTCGTCTTGC
AGGCAAGGTGGGTCGTCCTGTAGAAACTTTGAAAAATTGGACGCCTGTTT
TGGAGCTCGGCAAAAAACTCTATCACTTGCCTATGCAGGTGCAGGAGGAG
GGGGAGAAAGGGAAAGGGTCGTTTTTGAGGGCACTTGTCAGTACTTACGG
CGAGGGGGTGAAGGATTTTGTGGGGAAGAGCACGCGGTGTAGTGGGTTGG
AGAAGCTGCCGACTTTGACGTTTCTGGCGGCGGAGCCCGTAGGCGTGCGT
CCAGACCAGCTCATGGGGGGGATCCACAGGCGGTCGCGGCGGGCGGAGCA
GGGGATTAGGATTCGACAGGGTTAG
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protein sequence of NO17G01430.1

>NO17G01430.1-protein ID=NO17G01430.1-protein|Name=NO17G01430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=525bp
MEAGSDWSYQMYQQVMGGFLRGEGLEGEGSGCIRFHLSDLSGEGPSKMVR
PLPSLNQVQRWGRQNSIAGSYLFAVDDQTPYREEVLYFELMPFTIAEMDR
YLVRDVVLHDARLRKRAGRRLQQVRAGEEGVEVEAVGVRMNGNGGSGAEG
AGEGRGISRGFCRAQGKSFKAVWTEFLPPAKAKRPAYTKQKDEKDEGEGR
GEKEKRKSTEEPTAEIAGDEEEELPLVLSVLVPREGTAGDLLVAMEEALG
LGSGGKEGQREAEGEDLNLELELLDTNHCKVRKVYEEDSPVRDLPETPLT
ARGGIIGSGTLLKAVVHALDRQERHLTQLLRSQKEGGAKAEAVESEVKPD
STPSVSSSSFETLLPLQINFLNMGADQPRPLHNAPTTLLGTIHPVGLPLL
TALFGTDSWEDFLARLAGKVGRPVETLKNWTPVLELGKKLYHLPMQVQEE
GEKGKGSFLRALVSTYGEGVKDFVGKSTRCSGLEKLPTLTFLAAEPVGVR
PDQLMGGIHRRSRRAEQGIRIRQG*
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mRNA from alignment at chr17:435788..437362+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO17G01430.1 ID=NO17G01430.1|Name=NO17G01430.1|organism=Nannochloropsis oceanica|type=mRNA|length=1575bp|location=Sequence derived from alignment at chr17:435788..437362+ (Nannochloropsis oceanica)
ATGGAGGCGGGGAGCGACTGGAGTTATCAGATGTACCAGCAAGTGATGGG
AGGGTTTTTGAGGGGCGAGGGGCTGGAGGGGGAAGGGTCGGGTTGCATTC
GTTTTCATTTGTCGGATTTGAGCGGGGAGGGGCCAAGTAAGATGGTGAGG
CCGTTGCCGAGCTTGAATCAGGTGCAGCGATGGGGGAGGCAAAATTCGAT
TGCGGGGTCGTATTTATTTGCTGTGGATGATCAGACTCCGTACCGGGAGG
AGGTATTGTACTTTGAGTTGATGCCGTTTACGATTGCGGAGATGGATCGG
TATTTAGTGAGGGATGTAGTGTTGCATGACGCTAGGTTGCGGAAGAGGGC
AGGAAGGAGACTGCAGCAGGTAAGAGCGGGGGAGGAAGGGGTAGAGGTCG
AGGCGGTGGGAGTAAGGATGAATGGGAATGGAGGAAGCGGGGCTGAAGGA
GCAGGAGAAGGAAGAGGGATAAGTCGTGGCTTTTGTCGGGCCCAGGGAAA
GAGCTTCAAGGCGGTTTGGACCGAGTTTTTGCCGCCGGCAAAGGCTAAGC
GGCCCGCTTACACGAAGCAAAAAGATGAAAAGGACGAGGGCGAGGGACGA
GGGGAGAAAGAGAAGAGAAAATCGACGGAAGAGCCTACGGCGGAAATTGC
GGGGGATGAGGAGGAAGAGCTGCCGCTGGTGCTGTCGGTGCTAGTGCCGA
GAGAGGGCACAGCGGGCGACCTGCTCGTGGCGATGGAGGAGGCTTTAGGG
TTAGGGTCGGGAGGCAAAGAAGGGCAGAGGGAAGCGGAGGGGGAGGACCT
CAATTTGGAGCTGGAGCTGTTGGACACGAATCATTGCAAGGTTCGGAAAG
TTTATGAAGAGGACAGTCCTGTGCGGGATTTGCCTGAAACCCCACTGACG
GCCCGAGGGGGGATCATTGGATCAGGGACTCTTTTGAAAGCAGTCGTGCA
TGCCCTAGACCGCCAAGAACGACATCTGACCCAACTCCTTCGCTCTCAGA
AGGAAGGAGGTGCGAAAGCGGAAGCAGTTGAGAGCGAGGTCAAGCCCGAC
TCCACCCCTTCCGTCTCTTCCTCCTCCTTTGAGACCCTCCTCCCCCTCCA
AATTAACTTCCTCAACATGGGAGCAGACCAGCCCCGACCTCTCCACAACG
CCCCCACCACTCTACTCGGCACCATCCACCCTGTCGGTCTACCACTCCTA
ACCGCCCTTTTTGGCACTGATTCCTGGGAGGACTTCCTTGCTCGTCTTGC
AGGCAAGGTGGGTCGTCCTGTAGAAACTTTGAAAAATTGGACGCCTGTTT
TGGAGCTCGGCAAAAAACTCTATCACTTGCCTATGCAGGTGCAGGAGGAG
GGGGAGAAAGGGAAAGGGTCGTTTTTGAGGGCACTTGTCAGTACTTACGG
CGAGGGGGTGAAGGATTTTGTGGGGAAGAGCACGCGGTGTAGTGGGTTGG
AGAAGCTGCCGACTTTGACGTTTCTGGCGGCGGAGCCCGTAGGCGTGCGT
CCAGACCAGCTCATGGGGGGGATCCACAGGCGGTCGCGGCGGGCGGAGCA
GGGGATTAGGATTCGACAGGGTTAG
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Coding sequence (CDS) from alignment at chr17:435788..437362+

>NO17G01430.1 ID=NO17G01430.1|Name=NO17G01430.1|organism=Nannochloropsis oceanica|type=CDS|length=1575bp|location=Sequence derived from alignment at chr17:435788..437362+ (Nannochloropsis oceanica)
ATGGAGGCGGGGAGCGACTGGAGTTATCAGATGTACCAGCAAGTGATGGG
AGGGTTTTTGAGGGGCGAGGGGCTGGAGGGGGAAGGGTCGGGTTGCATTC
GTTTTCATTTGTCGGATTTGAGCGGGGAGGGGCCAAGTAAGATGGTGAGG
CCGTTGCCGAGCTTGAATCAGGTGCAGCGATGGGGGAGGCAAAATTCGAT
TGCGGGGTCGTATTTATTTGCTGTGGATGATCAGACTCCGTACCGGGAGG
AGGTATTGTACTTTGAGTTGATGCCGTTTACGATTGCGGAGATGGATCGG
TATTTAGTGAGGGATGTAGTGTTGCATGACGCTAGGTTGCGGAAGAGGGC
AGGAAGGAGACTGCAGCAGGTAAGAGCGGGGGAGGAAGGGGTAGAGGTCG
AGGCGGTGGGAGTAAGGATGAATGGGAATGGAGGAAGCGGGGCTGAAGGA
GCAGGAGAAGGAAGAGGGATAAGTCGTGGCTTTTGTCGGGCCCAGGGAAA
GAGCTTCAAGGCGGTTTGGACCGAGTTTTTGCCGCCGGCAAAGGCTAAGC
GGCCCGCTTACACGAAGCAAAAAGATGAAAAGGACGAGGGCGAGGGACGA
GGGGAGAAAGAGAAGAGAAAATCGACGGAAGAGCCTACGGCGGAAATTGC
GGGGGATGAGGAGGAAGAGCTGCCGCTGGTGCTGTCGGTGCTAGTGCCGA
GAGAGGGCACAGCGGGCGACCTGCTCGTGGCGATGGAGGAGGCTTTAGGG
TTAGGGTCGGGAGGCAAAGAAGGGCAGAGGGAAGCGGAGGGGGAGGACCT
CAATTTGGAGCTGGAGCTGTTGGACACGAATCATTGCAAGGTTCGGAAAG
TTTATGAAGAGGACAGTCCTGTGCGGGATTTGCCTGAAACCCCACTGACG
GCCCGAGGGGGGATCATTGGATCAGGGACTCTTTTGAAAGCAGTCGTGCA
TGCCCTAGACCGCCAAGAACGACATCTGACCCAACTCCTTCGCTCTCAGA
AGGAAGGAGGTGCGAAAGCGGAAGCAGTTGAGAGCGAGGTCAAGCCCGAC
TCCACCCCTTCCGTCTCTTCCTCCTCCTTTGAGACCCTCCTCCCCCTCCA
AATTAACTTCCTCAACATGGGAGCAGACCAGCCCCGACCTCTCCACAACG
CCCCCACCACTCTACTCGGCACCATCCACCCTGTCGGTCTACCACTCCTA
ACCGCCCTTTTTGGCACTGATTCCTGGGAGGACTTCCTTGCTCGTCTTGC
AGGCAAGGTGGGTCGTCCTGTAGAAACTTTGAAAAATTGGACGCCTGTTT
TGGAGCTCGGCAAAAAACTCTATCACTTGCCTATGCAGGTGCAGGAGGAG
GGGGAGAAAGGGAAAGGGTCGTTTTTGAGGGCACTTGTCAGTACTTACGG
CGAGGGGGTGAAGGATTTTGTGGGGAAGAGCACGCGGTGTAGTGGGTTGG
AGAAGCTGCCGACTTTGACGTTTCTGGCGGCGGAGCCCGTAGGCGTGCGT
CCAGACCAGCTCATGGGGGGGATCCACAGGCGGTCGCGGCGGGCGGAGCA
GGGGATTAGGATTCGACAGGGTTAG
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Synonyms
Publications