NO17G01360, NO17G01360 (gene) Nannochloropsis oceanica

Overview
NameNO17G01360
Unique NameNO17G01360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4363
Alignment locationchr17:416749..421111 +

Link to JBrowse

Properties
Property NameValue
DescriptionPleckstrin domain-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:416749..421111 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005089Rho guanyl-nucleotide exchange factor activity
GO:0005089Rho guanyl-nucleotide exchange factor activity
GO:0005085guanyl-nucleotide exchange factor activity
Vocabulary: Biological Process
TermDefinition
GO:0035023regulation of Rho protein signal transduction
GO:0035556intracellular signal transduction
GO:0035023regulation of Rho protein signal transduction
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf
IPR035899DBL_dom_sf
IPR001849PH_domain
IPR000219DH-domain
Homology
BLAST of NO17G01360 vs. NCBI_GenBank
Match: EWM24248.1 (pleckstrin domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 961.4 bits (2484), Expect = 2.300e-276
Identity = 589/1073 (54.89%), Postives = 687/1073 (64.03%), Query Frame = 0
Query:   20 DGSWGPVPSSSP--PPSSPSNLVGVSTSLPLTPRSRTTRRDQVARELMDSERTFVEQMTVLTKVFINPLRWWKLEITQGRESMHPPLPDALLQEIFGNVEQLLVFNAHVVEQFAELHCGNQAFGGFFKKAAPFFKMYSSYVSNYDRAMETLLHLIETRLDFAAFVRACELQEGCKGLNLRAYLIMPVQRIPRYKLLLTELLKHTSEDHPDYEDLEAAVKLVSGVVGAINEDIKRQERRFKVIEIQEQWDTVLVTASRKFEKEGPLIKVCRKGPKTREFVLFNDLLIYGVRKMASSEKRYLHRKLDLGELFVVDSGEAEKTFVLATRSKSFVVQCVDMAEKKSWMAAFTCCFAEMEKTVLYGKNRTINKDHRLTHVGLWMVREGEMVRESYLMPPDMPKDKTYGFLSFQDLRLIVDPQEPDRSSMGKRVLSRILRRGASLSRFNFKVQSGNPVPCEHVSPDDIHGAVDSDDDDEVSTYSDALSPCSSASASPYDFDSADTRWGGIGVHGFPVTSTRTNITTTPPLTDDATATDPSSSTGVAMTRTGMRRASLDTVAPGALNDVGFQTASGFIDGRQSSKWSGILSGLRPQGANSTSPKAVPDLHQEKELAALERSLGLMGFR--NEAKNGGHTNDSKPPQARLSPPPLVDTAASAPTGATAVP-STNTIVGGGVAISSNSXXXASAPGSLHGGRPPKPISPXXXXXXXXXXXXLIHCVPSEQHHISPNALFSPAASFSSESSPFTSYANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSIVVSHEKFGGXXXXXXXXXXXXXXXNGALLGPDAESPGGSSSRSRRSSTGGPRPAKAPRSPRFGSLSPPARSEHLNSDSPPDVFSRSSSPLPHPDLSLPPPSFSSTASSYRVPGNEYVVVLPVSDLGLGIFLRDENGKVLVGGFRSPKNLSGAGXXXXXXXXXXXXXXXXXXXXXXXPSMRAGIRLGDSLLKVNGTVVHSVSHTIAVLGESRMEKVIALTLRRGTGVGEGWPGRTGKVSAGAGA-RVLSHSPPKPQSKILRIHRDRGT 1087
            + ++ P P+  P   PS+P    G S +LPLTPRSR+ RRDQVARE++DSE++FVEQM VLTK FI PLR+W  EI    ES HPPLP++ LQEIF N+EQLL+FN HVVEQF+EL  G+QAFGGFFKKAAPFFKMYSSYVSNYDRAMETLL+LIETRLDFAAFVRACELQEGCKGLNLRAYLIMP+QRIPRYKLLLTELLKHT E+HPD+EDLEAAVKLVSGVVGAINEDIKRQE+RFKVIEIQE+WDT LVTASRKFEKEG L+KVCRKGPK R+FVL NDLLIYG RK+ASSEK  LHRK+DL ELFVVDSG AEKTF+LATR+KSFVVQC DM++KK+WMAAF  CFAEMEKTVLYGK R +NKD RLTHVGLWMVR+GEM+RESYL+PP + ++K YGFL F+DLRL+VDPQ P R SMGKRVLSRI+RRGASLS+FNFKVQS +P                        T++DALSP SSAS SP +   +D R    G+  +  T +R                                  S+D V    LND+GFQT SGFIDGRQS KWSGIL GLRP+GA+S SP  V D  Q  ++AALER++GLMG +     +NG  T +S+P     SPPPL     +AP G  +V    N  +GGGV          + P S   G    P+SP                 P+++   + N  F P+++ S    P TS ++                                                        +  +S + F G                      +A          R    GG RP KAPRSPR GSLSPP+      S      FSRSS P+      LP PS  S  SS R PGNEYVVVLPVSDLGLGIFLRDE+G+V+VGGFRSPK+L+G G        XXXXXXXX       PSMRAGI+LGD LLKVNGT VHSV+ TI++L ESRMEKV ALTLRR     EGW  R   ++AG G+ RVLS+SPPKPQSK LR  R  G+
Sbjct:    5 EDTYPPTPTRVPSWSPSNPPVTDGAS-NLPLTPRSRSRRRDQVAREILDSEKSFVEQMMVLTKTFIKPLRYWNAEIAGNAESTHPPLPNSFLQEIFSNIEQLLIFNGHVVEQFSELQRGSQAFGGFFKKAAPFFKMYSSYVSNYDRAMETLLNLIETRLDFAAFVRACELQEGCKGLNLRAYLIMPIQRIPRYKLLLTELLKHTPEEHPDFEDLEAAVKLVSGVVGAINEDIKRQEKRFKVIEIQERWDTNLVTASRKFEKEGMLVKVCRKGPKARQFVLLNDLLIYGARKIASSEKCTLHRKVDLSELFVVDSGNAEKTFILATRAKSFVVQCADMSDKKTWMAAFAACFAEMEKTVLYGKGRVLNKDQRLTHVGLWMVRDGEMLRESYLLPPQLQENKMYGFLDFRDLRLVVDPQGPSRGSMGKRVLSRIMRRGASLSQFNFKVQSEHP-XXXXXXXXXXXXXXXXXXXXXXXTFADALSPFSSASVSPQNLGLSDAR-TNYGLDAYSATRSR----------------------------------SVDAVPSAPLNDIGFQTTSGFIDGRQSGKWSGILHGLRPKGASSASPGPVADHQQRSDMAALERTMGLMGLQAPYNQENGNETGESRP-----SPPPL-SAVVAAPVGVKSVDVGRNVTLGGGVC--------PTKPTSPSHGHLSAPLSPRRAYEDLTR--------PAQE---AVNLPFLPSSASSFAPYPSTSVSS------------------------------------LRQSSDSGGEHSAKTLAEGEAASLSSQSFWG-----GSTGGKNHIGGNTSTSEEARKCDAVPQSFRHHQVGGSRPVKAPRSPRQGSLSPPSLPARFESAKSGGAFSRSSPPV-SKFAPLPLPS-CSALSSNRTPGNEYVVVLPVSDLGLGIFLRDESGEVVVGGFRSPKHLTGVG----SGASXXXXXXXXTSATLTNPSMRAGIKLGDVLLKVNGTPVHSVNQTISILRESRMEKVFALTLRR-VNNAEGWAARGNNMAAGLGSMRVLSYSPPKPQSKSLRGSRTSGS 967          
BLAST of NO17G01360 vs. NCBI_GenBank
Match: CBJ31166.1 (pleckstrin homology (PH) domain-containing protein [Ectocarpus siliculosus])

HSP 1 Score: 213.4 bits (542), Expect = 3.500e-51
Identity = 121/324 (37.35%), Postives = 182/324 (56.17%), Query Frame = 0
Query:   59 QVARELMDSERTFVEQMTVLTKVFINPLRWWKLEITQGRESMHPPLPDALLQEIFGNVEQLLVFNAHVVEQFAELHCGNQAFG-------GFFKKAAPFFKMYSSYVSNYDRAMETLLHLIETRLDFAAFVRACELQEGCKGLNLRAYLIMPVQRIPRYKLLLTELLKHTSEDHPDYEDLEAAVKLVSGVVGAINEDIKRQERRFKVIEIQEQWDTVLVTASRKFEKEGPLIKVCRKGPKTREFVLFNDLLIYGVR-----KMASSEKRY-LHRKLDLGELFVVDSGEAEKTFVLATRSKSFVVQCVDMAEKKSWMAAFTCCFA 370
            QV  E++ SE T+V+++  L  VF+ PL  W  E   G +     +P   + EIF NV  +L FN   +   A  H G +  G          +++   FK YS YV NY ++++TL    E   +F AF+R CE Q+ C GL+L+AYLI PVQR+PRY+LL+ +LLKHT E HPD+ DL AA++ VS  V  +NE  + +ER  + +E+Q ++    +  S    KEG L+KVC  GP+  +FVLF+ +L+YG       K+    ++Y +H ++ L E  V+D G ++   +  +  KSFV   V    K++W+ AF   FA
Sbjct:    5 QVRDEIISSEETYVKELRTLVMVFLRPLEKWAAEGMNGLD-----VPAGSVSEIFSNVAAILEFNERFLSDLAGRH-GEEVDGRRRGIGTTLRRQSLDMFKPYSVYVKNYPQSLKTLA-ACEEFSEFNAFIRGCEHQDACHGLDLKAYLIQPVQRVPRYRLLIIQLLKHTKESHPDWADLNAALETVSSTVTKLNEGARDKERFVRALELQYEFREDFLKPSSHLVKEGFLLKVCNGGPRRYKFVLFSHMLVYGTEASLRAKLQRDHRKYKVHGRIPLHECLVLDYGSSDSFAIARSSGKSFVAMAVSAEAKQAWLDAFEESFA 321          
BLAST of NO17G01360 vs. NCBI_GenBank
Match: KXN69828.1 (hypothetical protein CONCODRAFT_71175 [Conidiobolus coronatus NRRL 28638])

HSP 1 Score: 191.8 bits (486), Expect = 1.100e-44
Identity = 134/387 (34.63%), Postives = 197/387 (50.90%), Query Frame = 0
Query:    4 PSRNSSI--TSIPNNTDK---DGSWGPVPSSSPPPSSPSNLVGVSTSLPLTP---RSRTTRRDQVARELMDSERTFVEQMTVLTKVFINPLRWWKLEITQGRESMHPPLPDALLQEIFGNVEQLLVFNAHVVEQF------AELHCGNQAFGGFFKKAAPFFKMYSSYVSNYDRAMETLLHLIETRLDFAAFVRACELQEGCKGLNLRAYLIMPVQRIPRYKLLLTELLKHTSEDHPDYEDLEAAVKLVSGVVGAINEDIKRQERRFKVIEIQEQ---WDTVLVTASRKFEKEGPLIKVCRKGPKTREFVLFNDLLIYGVRKMASSEKRYLHRKLDLGELFVVDSGEAEK---TFVLATRSKSFVVQCVDMAEKKSWMAAFTCCFAE 371
            PS NSS     +P N  +           S  P    PS+      S+ L+     S   +R  +A E++ +ERT+VE + ++ +VF  PL    L   + + +    L    LQ+IF N+  LL  N  ++ Q          +      G  F   APFFKMYS YV N++ A+  + + I+    FA F++  ++   CKGL+  AYLI+PVQRIPRYKLL+ ++LK+T   H DY+ L  A+ LV  V   +NE I++ E   +++ IQ+    ++ VL+   RKF K GP+ K+CRK  + REF LF+D+LIY    +   EK   HRKLDL E  + D  + E+   +F +  + KSF V       KK WM A      E
Sbjct:  352 PSENSSFITAELPRNESRLTLXXXXXXXXSPQPITPGPSDSSPEPHSVELSEEKLESLYKKRTHIANEILQTERTYVEGLELIERVFYQPL----LHSLKTQPAGQALLSKKSLQDIFANLIDLLNVNRELLRQLEARIVKRTWNPKTDCLGDIFCDMAPFFKMYSLYVKNFNSALSVISNQIQRHPPFAQFLKDPKVTSQCKGLSFEAYLILPVQRIPRYKLLIEDMLKNTPIFHKDYQGLAKALDLVKKVAVFVNETIRQHEMFMEMLRIQKSLVGFNEVLLVPGRKFIKRGPIHKICRKDHRLREFFLFSDILIYASPSL-YDEKFNFHRKLDLSETSITDVEDTEQIQNSFQVIGKEKSFGVYLESPEVKKKWMEAINSTITE 733          
BLAST of NO17G01360 vs. NCBI_GenBank
Match: CBN80121.1 (pleckstrin homology (PH) domain-containing protein [Ectocarpus siliculosus])

HSP 1 Score: 186.4 bits (472), Expect = 4.600e-43
Identity = 126/406 (31.03%), Postives = 190/406 (46.80%), Query Frame = 0
Query:   53 RTTRRDQVARELMDSERTFVEQMTVLTKVFINPLRWWKLEITQGRE------SMH---------PPLPDALLQEIFGNVEQLLVFNAHVVEQFAELHCGNQAFGG-----------------------------------------------------FFKKAAPFFKMYSSYVSNYDRAMETLLHLIETRLDFAAFVRACELQEGCKGLNLRAYLIMPVQRIPRYKLLLTELLKHTSEDHPDYEDLEAAVKLVSGVVGAINEDIKRQERRFKVIEIQEQW-DTVLVTASRKFEKEGPLIKVCRKGPKTREFVLFNDLLIYG--------VRKMASSEKRYLHRK-LDLGELFVVDSGE---------AEKTFVLATRSKSFVVQCVDMAEKKSWMAAFTCCFAEM 372
            R  RRD+   EL+ SE  +V  + +L  VF+ PL+ W  E+   ++      ++H         P    A  +EIF N  +L  FN   +    + H G    G                                                       F K+APF KMYS YV+N+D A E L  L      F+AF+ ACE Q+ C+GL+LR +L++PVQRIPRY+LLL  +L++TS D   +  +E ++  + G+   IN D+  + +R KV ++Q+++     VTASR F +EG L KV R G +   FVLFNDLL+YG        +R+ +S E+ Y HR+ ++L   F+VD+            E   ++ +  K+F+V      EK  W+ A   C  E+
Sbjct:    6 RERRRDEAVAELLSSEAEYVSDLKLLVDVFLLPLQRWAKELEAQQDPVLDHAAVHGGSIQARSAPSFTQADCKEIFANTLELAHFNRQFLLDLRKAHGGPFVPGSVGVVSPVSTSTECNEWRKVTSAGRDCLEGEDIGDPLRPTSPNISEKGPRQMLQVFLKSAPFLKMYSEYVNNFDTARERLTALERDNSSFSAFLTACEKQKPCRGLHLRDFLVLPVQRIPRYRLLLETILQYTSIDSNMHSAVEESLSTMGGIASKINSDLSLKLKRNKVYQLQQEFGGASFVTASRLFVREGDLFKVARNGVEKLHFVLFNDLLVYGQAKRRRPLLRRGSSREQLYHHRRDMNLSNCFIVDAPSYGSRCSSFLGETGMLVISEEKTFMVMASTAVEKDGWLQAIRLCMREL 411          
BLAST of NO17G01360 vs. NCBI_GenBank
Match: EXX56345.1 (Rom2p [Rhizophagus irregularis DAOM 197198w] >GBC49241.1 RhoGEF and PH domain containing 5/6 [Rhizophagus irregularis DAOM 181602] >PKC05388.1 hypothetical protein RhiirA5_361397 [Rhizophagus irregularis] >PKC65666.1 hypothetical protein RhiirA1_420189 [Rhizophagus irregularis] >PKK67305.1 hypothetical protein RhiirC2_751961 [Rhizophagus irregularis] >PKY27858.1 hypothetical protein RhiirB3_416463 [Rhizophagus irregularis] >POG75572.1 hypothetical protein GLOIN_2v1563407 [Rhizophagus irregularis DAOM 181602=DAOM 197198])

HSP 1 Score: 186.4 bits (472), Expect = 4.600e-43
Identity = 132/412 (32.04%), Postives = 207/412 (50.24%), Query Frame = 0
Query:   34 SSPSNLV----GVSTSLPLTPRSRTTRRDQVARELMDSERTFVEQMTVLTKVFINPLRWWKLEITQGRESMHPPLPDALLQEIFGNVEQLLVFNAHVVEQFAE------------------LHCGNQAFGGFFKKAAPFFKMYSSYVSNYDRAMETLLHLIETRLDFAAFVRACELQEGCKGLNLRAYLIMPVQRIPRYKLLLTELLKHTSEDHPDYEDLEAAVKLVSGVVGAINEDIKRQERRFKVIEIQEQ---WDTVLVTASRKFEKEGPLIKVCRKGPKTREFVLFNDLLIYGVRKMASSEKRYLHRKLDLGE---LFVVDSGEAEKTFVLATRSKSFVVQCVDMAEKKSWMAAFTCCFAEMEKTVLYGKNRTINKDHRLTHVGLWMVREGEMVRESYLMPPDMPKDK 418
            SSP+N          S+ ++  S   +R  +A E++ +ER +V+ + ++ ++F++PL       T+   S +P L    + EIF N+ +L+  N  ++ +  E                   +  +   G  F   APFFKMYS YV N++ A+  +   +     F+AF+R       CKGL L+AYLIMPVQRIPRYKLLL +LLK T E HPDY +L+ A +++  V   +NE I++ E    ++EIQ+    +D VL+   R F K G + K+CR+  + REF LF+D+LIY    +      + HRK  L +   L V D+   +  F + +  KSF V      EK+SW+ A        E+ +   +   I+ + RL    L+  R    + E+Y  P  +P  K
Sbjct:  309 SSPANAQLAQRASRASMRMSLNSLMQKRFNIAFEILTTERHYVDCLQLVQRLFLDPL-------TKSLSSANPILSKKSINEIFANLPELINVNTELLRRLDERIAITIDDKPIEDSEDKFWNPEDGCLGDVFLNMAPFFKMYSIYVKNFNSALSVIDVQLRDNPTFSAFLRDIIKTGQCKGLTLQAYLIMPVQRIPRYKLLLEDLLKKTVETHPDYLNLKKAYQVIENVATFVNETIRQHEMFITMLEIQKSLTGFDEVLLVPGRTFIKRGIVKKICRRTHQKREFFLFSDILIYASPSLMDDTYTF-HRKFSLEDVTILVVEDTQYVKNGFQIMSPQKSFTVYADTQKEKESWINATR---DAKEEYLSAKRTLKIDNNERLERKDLYKKR----IVENYHAPVWIPDSK 705          
BLAST of NO17G01360 vs. NCBI_GenBank
Match: EXX56346.1 (Rom2p [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 186.4 bits (472), Expect = 4.600e-43
Identity = 132/412 (32.04%), Postives = 207/412 (50.24%), Query Frame = 0
Query:   34 SSPSNLV----GVSTSLPLTPRSRTTRRDQVARELMDSERTFVEQMTVLTKVFINPLRWWKLEITQGRESMHPPLPDALLQEIFGNVEQLLVFNAHVVEQFAE------------------LHCGNQAFGGFFKKAAPFFKMYSSYVSNYDRAMETLLHLIETRLDFAAFVRACELQEGCKGLNLRAYLIMPVQRIPRYKLLLTELLKHTSEDHPDYEDLEAAVKLVSGVVGAINEDIKRQERRFKVIEIQEQ---WDTVLVTASRKFEKEGPLIKVCRKGPKTREFVLFNDLLIYGVRKMASSEKRYLHRKLDLGE---LFVVDSGEAEKTFVLATRSKSFVVQCVDMAEKKSWMAAFTCCFAEMEKTVLYGKNRTINKDHRLTHVGLWMVREGEMVRESYLMPPDMPKDK 418
            SSP+N          S+ ++  S   +R  +A E++ +ER +V+ + ++ ++F++PL       T+   S +P L    + EIF N+ +L+  N  ++ +  E                   +  +   G  F   APFFKMYS YV N++ A+  +   +     F+AF+R       CKGL L+AYLIMPVQRIPRYKLLL +LLK T E HPDY +L+ A +++  V   +NE I++ E    ++EIQ+    +D VL+   R F K G + K+CR+  + REF LF+D+LIY    +      + HRK  L +   L V D+   +  F + +  KSF V      EK+SW+ A        E+ +   +   I+ + RL    L+  R    + E+Y  P  +P  K
Sbjct:  309 SSPANAQLAQRASRASMRMSLNSLMQKRFNIAFEILTTERHYVDCLQLVQRLFLDPL-------TKSLSSANPILSKKSINEIFANLPELINVNTELLRRLDERIAITIDDKPIEDSEDKFWNPEDGCLGDVFLNMAPFFKMYSIYVKNFNSALSVIDVQLRDNPTFSAFLRDIIKTGQCKGLTLQAYLIMPVQRIPRYKLLLEDLLKKTVETHPDYLNLKKAYQVIENVATFVNETIRQHEMFITMLEIQKSLTGFDEVLLVPGRTFIKRGIVKKICRRTHQKREFFLFSDILIYASPSLMDDTYTF-HRKFSLEDVTILVVEDTQYVKNGFQIMSPQKSFTVYADTQKEKESWINATR---DAKEEYLSAKRTLKIDNNERLERKDLYKKR----IVENYHAPVWIPDSK 705          
BLAST of NO17G01360 vs. NCBI_GenBank
Match: EXX56347.1 (Rom2p [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 186.4 bits (472), Expect = 4.600e-43
Identity = 132/412 (32.04%), Postives = 207/412 (50.24%), Query Frame = 0
Query:   34 SSPSNLV----GVSTSLPLTPRSRTTRRDQVARELMDSERTFVEQMTVLTKVFINPLRWWKLEITQGRESMHPPLPDALLQEIFGNVEQLLVFNAHVVEQFAE------------------LHCGNQAFGGFFKKAAPFFKMYSSYVSNYDRAMETLLHLIETRLDFAAFVRACELQEGCKGLNLRAYLIMPVQRIPRYKLLLTELLKHTSEDHPDYEDLEAAVKLVSGVVGAINEDIKRQERRFKVIEIQEQ---WDTVLVTASRKFEKEGPLIKVCRKGPKTREFVLFNDLLIYGVRKMASSEKRYLHRKLDLGE---LFVVDSGEAEKTFVLATRSKSFVVQCVDMAEKKSWMAAFTCCFAEMEKTVLYGKNRTINKDHRLTHVGLWMVREGEMVRESYLMPPDMPKDK 418
            SSP+N          S+ ++  S   +R  +A E++ +ER +V+ + ++ ++F++PL       T+   S +P L    + EIF N+ +L+  N  ++ +  E                   +  +   G  F   APFFKMYS YV N++ A+  +   +     F+AF+R       CKGL L+AYLIMPVQRIPRYKLLL +LLK T E HPDY +L+ A +++  V   +NE I++ E    ++EIQ+    +D VL+   R F K G + K+CR+  + REF LF+D+LIY    +      + HRK  L +   L V D+   +  F + +  KSF V      EK+SW+ A        E+ +   +   I+ + RL    L+  R    + E+Y  P  +P  K
Sbjct:  309 SSPANAQLAQRASRASMRMSLNSLMQKRFNIAFEILTTERHYVDCLQLVQRLFLDPL-------TKSLSSANPILSKKSINEIFANLPELINVNTELLRRLDERIAITIDDKPIEDSEDKFWNPEDGCLGDVFLNMAPFFKMYSIYVKNFNSALSVIDVQLRDNPTFSAFLRDIIKTGQCKGLTLQAYLIMPVQRIPRYKLLLEDLLKKTVETHPDYLNLKKAYQVIENVATFVNETIRQHEMFITMLEIQKSLTGFDEVLLVPGRTFIKRGIVKKICRRTHQKREFFLFSDILIYASPSLMDDTYTF-HRKFSLEDVTILVVEDTQYVKNGFQIMSPQKSFTVYADTQKEKESWINATR---DAKEEYLSAKRTLKIDNNERLERKDLYKKR----IVENYHAPVWIPDSK 705          
BLAST of NO17G01360 vs. NCBI_GenBank
Match: PKY42299.1 (hypothetical protein RhiirA4_397238 [Rhizophagus irregularis])

HSP 1 Score: 186.4 bits (472), Expect = 4.600e-43
Identity = 132/412 (32.04%), Postives = 207/412 (50.24%), Query Frame = 0
Query:   34 SSPSNLV----GVSTSLPLTPRSRTTRRDQVARELMDSERTFVEQMTVLTKVFINPLRWWKLEITQGRESMHPPLPDALLQEIFGNVEQLLVFNAHVVEQFAE------------------LHCGNQAFGGFFKKAAPFFKMYSSYVSNYDRAMETLLHLIETRLDFAAFVRACELQEGCKGLNLRAYLIMPVQRIPRYKLLLTELLKHTSEDHPDYEDLEAAVKLVSGVVGAINEDIKRQERRFKVIEIQEQ---WDTVLVTASRKFEKEGPLIKVCRKGPKTREFVLFNDLLIYGVRKMASSEKRYLHRKLDLGE---LFVVDSGEAEKTFVLATRSKSFVVQCVDMAEKKSWMAAFTCCFAEMEKTVLYGKNRTINKDHRLTHVGLWMVREGEMVRESYLMPPDMPKDK 418
            SSP+N          S+ ++  S   +R  +A E++ +ER +V+ + ++ ++F++PL       T+   S +P L    + EIF N+ +L+  N  ++ +  E                   +  +   G  F   APFFKMYS YV N++ A+  +   +     F+AF+R       CKGL L+AYLIMPVQRIPRYKLLL +LLK T E HPDY +L+ A +++  V   +NE I++ E    ++EIQ+    +D VL+   R F K G + K+CR+  + REF LF+D+LIY    +      + HRK  L +   L V D+   +  F + +  KSF V      EK+SW+ A        E+ +   +   I+ + RL    L+  R    + E+Y  P  +P  K
Sbjct:  309 SSPANAQLAQRASRASMRMSLNSLMQKRFNIAFEILTTERHYVDCLQLVQRLFLDPL-------TKSLSSANPILSKKSINEIFANLPELINVNTELLRRLDERIAITIDDKPIEDSEDKFWNPEDGCLGDVFLNMAPFFKMYSIYVKNFNSALSVIDVQLRDNPTFSAFLRDIIKTGQCKGLTLQAYLIMPVQRIPRYKLLLEDLLKKTVETHPDYLNLKKAYQVIENVATFVNETIRQHEMFITMLEIQKSLTGFDEVLLVPGRTFIKRGIVKKICRRTHQKREFFLFSDILIYASPSLMDDTYTF-HRKFSLEDVTILVVEDTQYVKNGFQIMSPQKSFTVYADTQKEKESWINATR---DAKEEYLSAKRTLKIDNNERLERKDLYKKR----IVENYHAPVWIPDSK 705          
BLAST of NO17G01360 vs. NCBI_GenBank
Match: XP_016607923.1 (hypothetical protein SPPG_05256 [Spizellomyces punctatus DAOM BR117] >KNC99883.1 hypothetical protein SPPG_05256 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 184.9 bits (468), Expect = 1.300e-42
Identity = 127/383 (33.16%), Postives = 191/383 (49.87%), Query Frame = 0
Query:   47 PLTPRSRTTRRDQVARELMDSERTFVEQMTVLTKVFINPLRWWKLEITQGRESMHPPLPDALLQEIFGNVEQLLVFNAHVVEQF---AELHCGNQ---AFGGFFKKAAPFFKMYSSYVSNYDRAMETLLHLIETRLDFAAFVRACELQEGCKGLNLRAYLIMPVQRIPRYKLLLTELLKHTSEDHPDYEDLEAAVKLVSGVVGAINEDIKRQERRFKVIEIQE-----QWDTVLVTASRKFEKEGPLIKVCRKGPKTREFVLFNDLLIYGVRKMASSEKRYL-HRKLDLGELFVV---DSGEAEKTFVLATRSKSFVVQCVDMAEKKSWMAAFTCCFAEMEKTVLYGKNRTINKDHRLTHVGLWMVREGEMVRESYLMPPDMP 415
            P +P   T +R+ +ARE++DSER +V+ + +L  +F+NPL         G  S    +P  ++Q IF  +  ++  N  + +Q     E H  N      G  F   APF KMYSSYV N++ A+  +   I     FA FV         KGL  +AYLIMPVQRIPRYK+L+ +LLKHT  DHPD+  L+ +++ ++ V   +NE I+  E   ++IE+Q+     Q D  LVT  R+  + G + K+CR+  +TR  +L +D LIY        E +Y+ HRKLDL    V+   D+ + +  F + +  KSF +      EK+ W+ A      E+         R+     R  H   W   E +     Y  P  +P
Sbjct:  234 PASPIVDTKKRENIAREILDSERRYVDSLLLLQTLFLNPLM-----AAVGTTS--EVIPKKIVQSIFSELAGIINVNMELRKQLEARLEEHPWNPVDGCLGDIFLNLAPFLKMYSSYVKNFNTALSVVSEQISKNPAFAQFVTKQNANPDLKGLGFQAYLIMPVQRIPRYKMLVEDLLKHTEVDHPDHSTLQKSLETIAEVAVFVNETIRHHEMMQELIEMQKCIRGLQED--LVTPGRRLIRRGKVQKICRRRHQTRYLILLSDFLIY--TSPGILEDQYVFHRKLDLELCQVIDVPDTQDLQHIFQIVSPEKSFAMYADSQQEKEDWIKAIDGAIREL---------RSNKSTLRSEHGDNWYANEKKKKMHHYSAPVWVP 596          
BLAST of NO17G01360 vs. NCBI_GenBank
Match: CEP01275.1 (hypothetical protein PBRA_001881 [Plasmodiophora brassicae])

HSP 1 Score: 182.2 bits (461), Expect = 8.700e-42
Identity = 114/335 (34.03%), Postives = 173/335 (51.64%), Query Frame = 0
Query:   56 RRDQVARELMDSERTFVEQMTVLTKVFINPLRWWKLEITQGRESMHPPLPDALLQEIFGNVEQLLVFNAHVVEQFAELHC---GNQAFGGFFKKAAPFFKMYSSYVSNYDRAMETLLHLIETRLDFAAFVRACELQEGCKGLNLRAYLIMPVQRIPRYKLLLTELLKHTSEDHPDYEDLEAAVKLVSGVVGAINEDIKRQERRFKVIEIQEQW--DTVLVTASRKFEKEGPLIKVCRKGPKTREFVLFNDLLIYGVRKMASSEKRYLHRKLDLGELF-VVD--SGEAEKTFVLATRSKSFVVQCVDMAEKKSWMAAFTCCFAEMEKTVLYGKNRT 383
            +R ++AREL+ +E+T+VE + +L KVFI PL        QG++S+ P      L E+F NV+ +   N   +++ +         Q  G  F   APF +MY SY + ++     L  + + R      +        CKG  L ++LI+PVQR+PRY++L  EL   T   HPDY+DL++A +  S V   INE I+ +E   K++E+Q+++  +  LV  SR+  + G L KVCR     REF+LFNDLL+Y       S+   L+R + +   F V+D  S E    F + ++ KSF V      +K  W+   T C  E        KNRT
Sbjct:    2 KRTRLARELLSTEQTYVESIDILVKVFIVPL--------QGKQSLSPS-----LAEMFRNVQVIAGLNKKFLDELSVRMVQWDDTQKIGDVFLAFAPFLRMYCSYANQHEDGTRVLQQMRQNRDSLVKLINEFAQSPECKGNGLESFLILPVQRLPRYRMLFHELSSITDPSHPDYDDLKSACQQASNVTTQINEAIRDRENSAKILELQKRFNNEVTLVAPSRRLVRVGSLTKVCRSKNMVREFILFNDLLVYARPASGRSDGLKLNRMMSVDASFEVIDEPSSEGRYPFQIRSQEKSFTVLADSHEDKVEWLIHLTECIQEF-------KNRT 316          
The following BLAST results are available for this feature:
BLAST of NO17G01360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24248.12.300e-27654.89pleckstrin domain-containing protein [Nannochlorop... [more]
CBJ31166.13.500e-5137.35pleckstrin homology (PH) domain-containing protein... [more]
KXN69828.11.100e-4434.63hypothetical protein CONCODRAFT_71175 [Conidiobolu... [more]
CBN80121.14.600e-4331.03pleckstrin homology (PH) domain-containing protein... [more]
EXX56345.14.600e-4332.04Rom2p [Rhizophagus irregularis DAOM 197198w] >GBC4... [more]
EXX56346.14.600e-4332.04Rom2p [Rhizophagus irregularis DAOM 197198w][more]
EXX56347.14.600e-4332.04Rom2p [Rhizophagus irregularis DAOM 197198w][more]
PKY42299.14.600e-4332.04hypothetical protein RhiirA4_397238 [Rhizophagus i... [more]
XP_016607923.11.300e-4233.16hypothetical protein SPPG_05256 [Spizellomyces pun... [more]
CEP01275.18.700e-4234.03hypothetical protein PBRA_001881 [Plasmodiophora b... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002925NSK002925Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G01360.1NO17G01360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100020g66gene6198Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G01360.1NO17G01360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G01360 ID=NO17G01360|Name=NO17G01360|organism=Nannochloropsis oceanica|type=gene|length=4363bp
CAGTCCACCTACACGAAGAGCCTACACAGTGGCGAGGGGTAGTAGCTTTG
GAATTGGAGGAAGTTCAAGCGAGAACGACGCCGCTCGACTATCGCACGGG
CACACCTTGCTCATCTCGCGTTGACCCGGGGGCAGGACGACGAAGTACAT
GTGGGACCTCTAGCGGCACCGAACCATCTATCTACAGCTCCATCCCGCAC
GTGTGTCGCGCATCTCGCACCTTATTACTGGGACCAGCTGTTGGAACGGG
ACACGGAGAAATCCCCACAAACAAGTCTTGCTGTGACGCCTTGTACACGC
CTTTCTTCTGCCTCAAATCGCACACACACACAAATGGACCACCCCAGCAG
AAACAGCAGCATAACGTCCATACCGAACAACACTGACAAAGATGGCAGCT
GGGGTCCTGTGCCCAGCTCAAGCCCCCCGCCATCGTCTCCCTCAAACCTA
GTAGGCGTGTCGACCTCCTTGCCTCTAACACCCCGCTCTCGGACCACGCG
CCGCGACCAAGTCGCACGCGAGCTCATGGACTCAGAAAGGACTTTTGTGG
AGCAAATGACGGTACTGACCAAGGTCTTCATCAATCCCTTGCGATGGTGG
AAATTGGAGATCACACAAGGCAGGGAATCGATGCACCCGCCGCTGCCGGA
CGCGCTCCTTCAAGAAATTTTTGGCAATGTTGAGCAGCTGTTGGTTTTCA
ATGCGCATGTAGTGGAGCAATTTGCGGAGCTGCATTGTGGGAATCAGGCG
TTTGGGGGCTTCTTCAAGAAGGCGGCACCCTTTTTTAAGATGTATTCGAG
TTACGTCTCTAACTATGACAGAGCAATGGAGACATTGCTGCATTTGATTG
AGACCCGGCTCGATTTTGCAGCTTTTGTCCGAGgtacgtgtgtgtagcga
agtgtttcgaatcctttgactggctgactggcgcaagcgttgatctgtct
ctccgatctcaagcctcttttgtttttccttcccgggctgtggctatcct
cttatcccattacccttcctcctcctctctcatttccttccacccccagC
CTGCGAACTCCAGGAAGGTTGCAAGGGCCTAAATCTCCGGGCTTATCTCA
TCATGCCTGTGCAGAGAATACCACGCTACAAGCTCTTGCTCACGGAGCTG
CTTAAACACACGTCAGAGGACCACCCTGATTACGAGgtatatggcacctg
gaagagggcggtcagcaagagcacgcaagctgcgctttttttaaaaaatg
tagcactgatatttaaataaaaacctgcattcactttacacaacatatac
atgtagGACCTGGAGGCGGCCGTCAAGCTCGTGTCAGGCGTGGTAGGCGC
CATCAATGAAGACATAAAAAGGCAAGAGAGGCGGTTTAAGGTCATCGAGA
TTCAAGAGCAATGGGACACGgtatgtttcaatatttactttacagaaggg
actccctaaccttctcgcctcccccctttgatcttctccttttcactcac
tcattatcctctcccctgtaccctttccttccagGTCCTTGTCACGGCTT
CCCGCAAATTCGAAAAGGAAGGGCCACTCATCAAGGTCTGTCGGAAAGGG
CCAAAAACGCGGGAATTCGTTCTCTTCAATGACCTCCTAATCTACGGCGT
CCGCAAAATGGCCTCCTCGGAAAAGCGCTATTTGCATAGGAAGCTTGATT
TGGGTGAGCTGTTCGTTGTGGATAGTGGGGAGGCAGAAAAGACCTTTGTT
TTGGCGACGCGTTCGAAGTCATTTGTTGTGCAATGTGTGGACATGGCCGA
AAAAAAGTCATGGATGGCGGCGTTTACTTGTTGTTTTGCCGAGATGGAGA
AGACGGTCTTGTATGGGAAGAATCGAACAATCAACAAAGACCATCGCTTG
ACCCATGTCGGCCTGTGGATGGTCAGGGAGGGGGAGATGGTGCGAGAATC
CTACCTTATGCCACCTGACATGCCCAAGGATAAAACGTATGGCTTCCTCA
GCTTCCAAGACCTCCGTCTGATTGTCGATCCTCAGGAGCCTGATCGTAGC
AGCATGGGCAAGCGTGTCCTTTCTCGTATCTTGCGGCGGGGGGCAAGCCT
TTCGCGGTTTAATTTTAAGGTCCAGAGTGGGAATCCGGTGCCATGCGAGC
ACGTCTCACCGGACGATATTCATGGAGCGGTTGATTCGGACGACGATGAC
GAAGTGTCGACTTATAGCGATGCCCTCTCCCCATGCAGCTCTGCGAGTGC
CTCCCCCTACGATTTTGATTCAGCGGATACGCGCTGGGGGGGCATTGGCG
TACACGGCTTTCCCGTCACAAGTACTAGGACGAATATTACTACTACTCCT
CCTCTTACTGATGATGCTACGGCGACGGATCCCAGCAGCAGTACGGGTGT
TGCGATGACGAGGACCGGGATGCGAAGGGCGAGCCTCGATACGGTGGCGC
CGGGCGCGCTCAATGACGTGGGGTTCCAGACCGCTTCGGGCTTTATCGAT
GGGAGgtaggtttggctgacgtgaatttggggctagatttaaattgtacc
aaccctgttgttttatcttctccatctcctgaattcccaccctccctttg
attgcagacagtgctccattatcctaaccctctcattcccgccatccgat
ttcgcccttctctctctccttccatccggactcccatccatacagACAAA
GCAGCAAATGGAGTGGCATCCTCAGCGGCCTCCGTCCCCAGGGCGCAAAC
TCCACCTCCCCCAAAGCTGTCCCAGACCTTCACCAGGAAAAGGAATTGGC
AGCTCTTGAACGGTCCTTAGGCTTGATGGGGTTCAGAAATGAGGCGAAGA
ACGGAGGGCACACAAACGACAGCAAGCCTCCGCAGGCTCGCCTCTCTCCA
CCTCCGCTCGTTGACACGGCCGCCTCGGCCCCTACAGGTGCCACTGCTGT
CCCAAGTACCAATACCATCGTCGGCGGTGGTGTGGCTATCAGCAGCAACA
GCAGCAGCAATGCCAGTGCCCCGGGATCATTACACGGGGGGCGTCCGCCT
AAACCGATTTCACCTCCTCGGAGCCCCTTGTCGCCTCCCATCTCTCCTCG
TCTGATCCATTGCGTCCCCTCAGAACAACACCATATCTCTCCTAATGCCT
TGTTCTCGCCGGCAGCATCGTTTTCCTCGGAATCGTCTCCCTTTACCTCC
TACGCAAACTCAAACACCATCAATTGCAGCGGCAGTGGCAGCAGCAGCAG
CAGCAGCAACAACAACAGACTTCCACATGGCGACTCGGCACGGACCAAGT
CACGTCCAAGCACAGGCAAGGGGGCTGGTAGGGGTGGGGGTGGCTGCAGC
AGCGGCAGCAGCAGAAGCAGCATGGGCAGTATCGTCGTATCTCACGAGAA
GTTCGGAGGTTCTGTTGCACCTGCTGCTGCTGCTGCTGCTAGTGCTAGCT
GGAGCAATGGAGCCTTATTAGGGCCCGATGCAGAGTCACCCGGTGGCAGC
AGCAGCAGGTCTCGCAGGAGCTCAACGGGAGGTCCACGTCCGGCCAAGGC
CCCCCGCTCTCCTCGCTTCGGTTCGCTCTCTCCCCCCGCCCGCTCCGAGC
ACCTCAACAGTGACAGTCCACCTGACGTCTTCTCTCGTTCATCCTCTCCT
TTGCCTCATCCTGATCTGTCACTACCCCCACCCTCATTCAGCTCCACAGC
CTCCTCCTACCGAGTACCTGGGAACGAGTATGTAGTTGTTCTCCCAGTTT
CTGATTTAGGTTTGGGCATTTTCTTGAGGGATGAGAATGGCAAGGTTTTA
GTGGGTGGATTTCGTTCCCCAAAGAACTTGTCAGGCGCTGGTGTTGGCGG
GGTTGGGGGAGCAGGGGGTGGGGGAGGAGGTGGGGGGGGTCATGGTGTGC
ATGCAATGAACCCATCCATGCGCGCGGGTATCAGGTTGGGAGATTCGTTG
CTCAAAGTAAATGGTACTGTTGTTCATTCGGTGAGTCACACGATTGCTGT
GCTCGGGGAGTCAAGGATGGAAAAGGTGATTGCCCTGACCTTGCGGCGAG
GCACTGGCGTCGGGGAGGGGTGGCCGGGAAGGACTGGGAAAGTCTCTGCG
GGGGCGGGAGCGCGCGTCCTTTCTCATTCGCCCCCCAAGCCTCAGAGCAA
GATTTTGCGAATTCATCGGGATAGAGGGACAGGAACAAAGTAGGCAGAGA
CGAGACGGAAGGAATGGGATGAAGAGAAAAAGATAGGGAGAAAGAGAGAG
AGGAGAGAGAGAAAGAGAGATTAAAAGAGAGAGTATGTACACACAAAACC
ATATTTTTTGCACCCACAAATCTGACAAGTAAATAACGAGAAAGTGGACA
TACGACTACCCCT
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protein sequence of NO17G01360.1

>NO17G01360.1-protein ID=NO17G01360.1-protein|Name=NO17G01360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1090bp
MDHPSRNSSITSIPNNTDKDGSWGPVPSSSPPPSSPSNLVGVSTSLPLTP
RSRTTRRDQVARELMDSERTFVEQMTVLTKVFINPLRWWKLEITQGRESM
HPPLPDALLQEIFGNVEQLLVFNAHVVEQFAELHCGNQAFGGFFKKAAPF
FKMYSSYVSNYDRAMETLLHLIETRLDFAAFVRACELQEGCKGLNLRAYL
IMPVQRIPRYKLLLTELLKHTSEDHPDYEDLEAAVKLVSGVVGAINEDIK
RQERRFKVIEIQEQWDTVLVTASRKFEKEGPLIKVCRKGPKTREFVLFND
LLIYGVRKMASSEKRYLHRKLDLGELFVVDSGEAEKTFVLATRSKSFVVQ
CVDMAEKKSWMAAFTCCFAEMEKTVLYGKNRTINKDHRLTHVGLWMVREG
EMVRESYLMPPDMPKDKTYGFLSFQDLRLIVDPQEPDRSSMGKRVLSRIL
RRGASLSRFNFKVQSGNPVPCEHVSPDDIHGAVDSDDDDEVSTYSDALSP
CSSASASPYDFDSADTRWGGIGVHGFPVTSTRTNITTTPPLTDDATATDP
SSSTGVAMTRTGMRRASLDTVAPGALNDVGFQTASGFIDGRQSSKWSGIL
SGLRPQGANSTSPKAVPDLHQEKELAALERSLGLMGFRNEAKNGGHTNDS
KPPQARLSPPPLVDTAASAPTGATAVPSTNTIVGGGVAISSNSSSNASAP
GSLHGGRPPKPISPPRSPLSPPISPRLIHCVPSEQHHISPNALFSPAASF
SSESSPFTSYANSNTINCSGSGSSSSSSNNNRLPHGDSARTKSRPSTGKG
AGRGGGGCSSGSSRSSMGSIVVSHEKFGGSVAPAAAAAASASWSNGALLG
PDAESPGGSSSRSRRSSTGGPRPAKAPRSPRFGSLSPPARSEHLNSDSPP
DVFSRSSSPLPHPDLSLPPPSFSSTASSYRVPGNEYVVVLPVSDLGLGIF
LRDENGKVLVGGFRSPKNLSGAGVGGVGGAGGGGGGGGGHGVHAMNPSMR
AGIRLGDSLLKVNGTVVHSVSHTIAVLGESRMEKVIALTLRRGTGVGEGW
PGRTGKVSAGAGARVLSHSPPKPQSKILRIHRDRGTGTK*
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Synonyms
Publications