NO17G01360.1, NO17G01360.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO17G01360.1
Unique Name	NO17G01360.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3773
Alignment location	chr17:416749..421111 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr17	genome	chr17:416749..421111 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO17G01360.1 vs.
Match: EWM24248.1 (pleckstrin domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 733.4 bits (1892), Expect = 1.000e-207
Identity = 448/833 (53.78%), Postives = 538/833 (64.59%), Query Frame = 0

Query:   20 DGSWGPVPSSSPP--PSSPSNLVGVSTSLPLTPRSRTTRRDQVARELMDSERTFVEQMTVLTKVFINPLRWWKLEITQGRESMHPPLPDALLQEIFGNVEQLLVFNAHVVEQFAELHCGNQAFGGFFKKAAPFFKMYSSYVSNYDRAMETLLHLIETRLDFAAFVRACELQEGCKGLNLRAYLIMPVQRIPRYKLLLTELLKHTSEDHPDYEDLEAAVKLVSGVVGAINEDIKRQERRFKVIEIQEQWDTVLVTASRKFEKEGPLIKVCRKGPKTREFVLFNDLLIYGVRKMASSEKRYLHRKLDLGELFVVDSGEAEKTFVLATRSKSFVVQCVDMAEKKSWMAAFTCCFAEMEKTVLYGKNRTINKDHRLTHVGLWMVREGEMVRESYLMPPDMPKDKTYGFLSFQDLRLIVDPQEPDRSSMGKRVLSRILRRGASLSRFNFKVQSGNPVPCEHVSPDDIHGAVDSDDDDEVSTYSDALSPCSSASASPYDFDSADTRWGGIGVHGFPVTSTRT-NITTTPPLTDDATAT-----DPSSSTGVAMTRTGMRRASLDTVAPGALNDVGFQTASGFIDGRQSSKWSGILSGLRPQGANSTSPKAVPDLHQEKELAALERSLGLMGFRNEAKNGG--HTNDSKPPQARLSPP--------------------PLVDTAAS--APTGATAVP------------STNTIVGGGVA-ISSNSSSNASAPGSLH-GGRP-----------------------PKPISPPRSP----LSPPISPRLIHCVPSEQHHISPNALFSPAASFSSESSPFTSYANSNTINCSGSGSSSSSSN 780
            + ++ P P+  P   PS+P    G S +LPLTPRSR+ RRDQVARE++DSE++FVEQM VLTK FI PLR+W  EI    ES HPPLP++ LQEIF N+EQLL+FN HVVEQF+EL  G+QAFGGFFKKAAPFFKMYSSYVSNYDRAMETLL+LIETRLDFAAFVRACELQEGCKGLNLRAYLIMP+QRIPRYKLLLTELLKHT E+HPD+EDLEAAVKLVSGVVGAINEDIKRQE+RFKVIEIQE+WDT LVTASRKFEKEG L+KVCRKGPK R+FVL NDLLIYG RK+ASSEK  LHRK+DL ELFVVDSG AEKTF+LATR+KSFVVQC DM++KK+WMAAF  CFAEMEKTVLYGK R +NKD RLTHVGLWMVR+GEM+RESYL+PP + ++K YGFL F+DLRL+VDPQ P R SMGKRVLSRI+RRGASLS+FNFKVQS +PVPCEH++PD+++   +SD+DDE ST++DALSP SSAS SP +   +D R    G+  +  T +R+ +   + PL D    T     D   S   +    G+R     + +PG + D   Q  S      ++    G+ +    +  N T             +AA      +   RN    GG   T  + P    LS P                    P + ++AS  AP  +T+V             S  T+  G  A +SS S    S  G  H GG                          +P+  PRSP    LSPP  P       S               +FS  S P + +A     +CS   S+ +  N
Sbjct:    5 EDTYPPTPTRVPSWSPSNPPVTDGAS-NLPLTPRSRSRRRDQVAREILDSEKSFVEQMMVLTKTFIKPLRYWNAEIAGNAESTHPPLPNSFLQEIFSNIEQLLIFNGHVVEQFSELQRGSQAFGGFFKKAAPFFKMYSSYVSNYDRAMETLLNLIETRLDFAAFVRACELQEGCKGLNLRAYLIMPIQRIPRYKLLLTELLKHTPEEHPDFEDLEAAVKLVSGVVGAINEDIKRQEKRFKVIEIQERWDTNLVTASRKFEKEGMLVKVCRKGPKARQFVLLNDLLIYGARKIASSEKCTLHRKVDLSELFVVDSGNAEKTFILATRAKSFVVQCADMSDKKTWMAAFAACFAEMEKTVLYGKGRVLNKDQRLTHVGLWMVRDGEMLRESYLLPPQLQENKMYGFLDFRDLRLVVDPQGPSRGSMGKRVLSRIMRRGASLSQFNFKVQSEHPVPCEHITPDEVYEPGESDEDDE-STFADALSPFSSASVSPQNLGLSDAR-TNYGLDAYSATRSRSVDAVPSAPLNDIGFQTTSGFIDGRQSGKWSGILHGLRPKGASSASPGPVAD--HQQRSDMAALERTMGLMGLQAPYNQENGNETGESRPSPPPLSAVVAAPVGVKSVDVGRNVTLGGGVCPTKPTSPSHGHLSAPLSPRRAYEDLTRPAQEAVNLPFLPSSASSFAPYPSTSVSSLRQSSDSGGEHSAKTLAEGEAASLSSQSFWGGSTGGKNHIGGNTSTSEEARKCDAVPQSFRHHQVGGSRPVKAPRSPRQGSLSPPSLPARFESAKS-------------GGAFSRSSPPVSKFAPLPLPSCSALSSNRTPGN 819

The following BLAST results are available for this feature:

BLAST of NO17G01360.1 vs.

BLAST of NO17G01360.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM24248.1	1.000e-207	53.78	pleckstrin domain-containing protein [Nannochlorop...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO17G01360	NO17G01360	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO17G01360.1	NO17G01360.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO17G01360.1.cds1	NO17G01360.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO17G01360.1.cds2	NO17G01360.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO17G01360.1.cds3	NO17G01360.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO17G01360.1.cds4	NO17G01360.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO17G01360.1.cds5	NO17G01360.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr17:416749..421111+
coding sequence from alignment at chr17:416749..421111+

mRNA sequence

>NO17G01360.1 ID=NO17G01360.1|Name=NO17G01360.1|organism=Nannochloropsis oceanica|type=mRNA|length=3773bp
CAGTCCACCTACACGAAGAGCCTACACAGTGGCGAGGGGTAGTAGCTTTG
GAATTGGAGGAAGTTCAAGCGAGAACGACGCCGCTCGACTATCGCACGGG
CACACCTTGCTCATCTCGCGTTGACCCGGGGGCAGGACGACGAAGTACAT
GTGGGACCTCTAGCGGCACCGAACCATCTATCTACAGCTCCATCCCGCAC
GTGTGTCGCGCATCTCGCACCTTATTACTGGGACCAGCTGTTGGAACGGG
ACACGGAGAAATCCCCACAAACAAGTCTTGCTGTGACGCCTTGTACACGC
CTTTCTTCTGCCTCAAATCGCACACACACACAAATGGACCACCCCAGCAG
AAACAGCAGCATAACGTCCATACCGAACAACACTGACAAAGATGGCAGCT
GGGGTCCTGTGCCCAGCTCAAGCCCCCCGCCATCGTCTCCCTCAAACCTA
GTAGGCGTGTCGACCTCCTTGCCTCTAACACCCCGCTCTCGGACCACGCG
CCGCGACCAAGTCGCACGCGAGCTCATGGACTCAGAAAGGACTTTTGTGG
AGCAAATGACGGTACTGACCAAGGTCTTCATCAATCCCTTGCGATGGTGG
AAATTGGAGATCACACAAGGCAGGGAATCGATGCACCCGCCGCTGCCGGA
CGCGCTCCTTCAAGAAATTTTTGGCAATGTTGAGCAGCTGTTGGTTTTCA
ATGCGCATGTAGTGGAGCAATTTGCGGAGCTGCATTGTGGGAATCAGGCG
TTTGGGGGCTTCTTCAAGAAGGCGGCACCCTTTTTTAAGATGTATTCGAG
TTACGTCTCTAACTATGACAGAGCAATGGAGACATTGCTGCATTTGATTG
AGACCCGGCTCGATTTTGCAGCTTTTGTCCGAGCCTGCGAACTCCAGGAA
GGTTGCAAGGGCCTAAATCTCCGGGCTTATCTCATCATGCCTGTGCAGAG
AATACCACGCTACAAGCTCTTGCTCACGGAGCTGCTTAAACACACGTCAG
AGGACCACCCTGATTACGAGGACCTGGAGGCGGCCGTCAAGCTCGTGTCA
GGCGTGGTAGGCGCCATCAATGAAGACATAAAAAGGCAAGAGAGGCGGTT
TAAGGTCATCGAGATTCAAGAGCAATGGGACACGGTCCTTGTCACGGCTT
CCCGCAAATTCGAAAAGGAAGGGCCACTCATCAAGGTCTGTCGGAAAGGG
CCAAAAACGCGGGAATTCGTTCTCTTCAATGACCTCCTAATCTACGGCGT
CCGCAAAATGGCCTCCTCGGAAAAGCGCTATTTGCATAGGAAGCTTGATT
TGGGTGAGCTGTTCGTTGTGGATAGTGGGGAGGCAGAAAAGACCTTTGTT
TTGGCGACGCGTTCGAAGTCATTTGTTGTGCAATGTGTGGACATGGCCGA
AAAAAAGTCATGGATGGCGGCGTTTACTTGTTGTTTTGCCGAGATGGAGA
AGACGGTCTTGTATGGGAAGAATCGAACAATCAACAAAGACCATCGCTTG
ACCCATGTCGGCCTGTGGATGGTCAGGGAGGGGGAGATGGTGCGAGAATC
CTACCTTATGCCACCTGACATGCCCAAGGATAAAACGTATGGCTTCCTCA
GCTTCCAAGACCTCCGTCTGATTGTCGATCCTCAGGAGCCTGATCGTAGC
AGCATGGGCAAGCGTGTCCTTTCTCGTATCTTGCGGCGGGGGGCAAGCCT
TTCGCGGTTTAATTTTAAGGTCCAGAGTGGGAATCCGGTGCCATGCGAGC
ACGTCTCACCGGACGATATTCATGGAGCGGTTGATTCGGACGACGATGAC
GAAGTGTCGACTTATAGCGATGCCCTCTCCCCATGCAGCTCTGCGAGTGC
CTCCCCCTACGATTTTGATTCAGCGGATACGCGCTGGGGGGGCATTGGCG
TACACGGCTTTCCCGTCACAAGTACTAGGACGAATATTACTACTACTCCT
CCTCTTACTGATGATGCTACGGCGACGGATCCCAGCAGCAGTACGGGTGT
TGCGATGACGAGGACCGGGATGCGAAGGGCGAGCCTCGATACGGTGGCGC
CGGGCGCGCTCAATGACGTGGGGTTCCAGACCGCTTCGGGCTTTATCGAT
GGGAGACAAAGCAGCAAATGGAGTGGCATCCTCAGCGGCCTCCGTCCCCA
GGGCGCAAACTCCACCTCCCCCAAAGCTGTCCCAGACCTTCACCAGGAAA
AGGAATTGGCAGCTCTTGAACGGTCCTTAGGCTTGATGGGGTTCAGAAAT
GAGGCGAAGAACGGAGGGCACACAAACGACAGCAAGCCTCCGCAGGCTCG
CCTCTCTCCACCTCCGCTCGTTGACACGGCCGCCTCGGCCCCTACAGGTG
CCACTGCTGTCCCAAGTACCAATACCATCGTCGGCGGTGGTGTGGCTATC
AGCAGCAACAGCAGCAGCAATGCCAGTGCCCCGGGATCATTACACGGGGG
GCGTCCGCCTAAACCGATTTCACCTCCTCGGAGCCCCTTGTCGCCTCCCA
TCTCTCCTCGTCTGATCCATTGCGTCCCCTCAGAACAACACCATATCTCT
CCTAATGCCTTGTTCTCGCCGGCAGCATCGTTTTCCTCGGAATCGTCTCC
CTTTACCTCCTACGCAAACTCAAACACCATCAATTGCAGCGGCAGTGGCA
GCAGCAGCAGCAGCAGCAACAACAACAGACTTCCACATGGCGACTCGGCA
CGGACCAAGTCACGTCCAAGCACAGGCAAGGGGGCTGGTAGGGGTGGGGG
TGGCTGCAGCAGCGGCAGCAGCAGAAGCAGCATGGGCAGTATCGTCGTAT
CTCACGAGAAGTTCGGAGGTTCTGTTGCACCTGCTGCTGCTGCTGCTGCT
AGTGCTAGCTGGAGCAATGGAGCCTTATTAGGGCCCGATGCAGAGTCACC
CGGTGGCAGCAGCAGCAGGTCTCGCAGGAGCTCAACGGGAGGTCCACGTC
CGGCCAAGGCCCCCCGCTCTCCTCGCTTCGGTTCGCTCTCTCCCCCCGCC
CGCTCCGAGCACCTCAACAGTGACAGTCCACCTGACGTCTTCTCTCGTTC
ATCCTCTCCTTTGCCTCATCCTGATCTGTCACTACCCCCACCCTCATTCA
GCTCCACAGCCTCCTCCTACCGAGTACCTGGGAACGAGTATGTAGTTGTT
CTCCCAGTTTCTGATTTAGGTTTGGGCATTTTCTTGAGGGATGAGAATGG
CAAGGTTTTAGTGGGTGGATTTCGTTCCCCAAAGAACTTGTCAGGCGCTG
GTGTTGGCGGGGTTGGGGGAGCAGGGGGTGGGGGAGGAGGTGGGGGGGGT
CATGGTGTGCATGCAATGAACCCATCCATGCGCGCGGGTATCAGGTTGGG
AGATTCGTTGCTCAAAGTAAATGGTACTGTTGTTCATTCGGTGAGTCACA
CGATTGCTGTGCTCGGGGAGTCAAGGATGGAAAAGGTGATTGCCCTGACC
TTGCGGCGAGGCACTGGCGTCGGGGAGGGGTGGCCGGGAAGGACTGGGAA
AGTCTCTGCGGGGGCGGGAGCGCGCGTCCTTTCTCATTCGCCCCCCAAGC
CTCAGAGCAAGATTTTGCGAATTCATCGGGATAGAGGGACAGGAACAAAG
TAGGCAGAGACGAGACGGAAGGAATGGGATGAAGAGAAAAAGATAGGGAG
AAAGAGAGAGAGGAGAGAGAGAAAGAGAGATTAAAAGAGAGAGTATGTAC
ACACAAAACCATATTTTTTGCACCCACAAATCTGACAAGTAAATAACGAG
AAAGTGGACATACGACTACCCCT

protein sequence of NO17G01360.1

>NO17G01360.1-protein ID=NO17G01360.1-protein|Name=NO17G01360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1090bp
MDHPSRNSSITSIPNNTDKDGSWGPVPSSSPPPSSPSNLVGVSTSLPLTP
RSRTTRRDQVARELMDSERTFVEQMTVLTKVFINPLRWWKLEITQGRESM
HPPLPDALLQEIFGNVEQLLVFNAHVVEQFAELHCGNQAFGGFFKKAAPF
FKMYSSYVSNYDRAMETLLHLIETRLDFAAFVRACELQEGCKGLNLRAYL
IMPVQRIPRYKLLLTELLKHTSEDHPDYEDLEAAVKLVSGVVGAINEDIK
RQERRFKVIEIQEQWDTVLVTASRKFEKEGPLIKVCRKGPKTREFVLFND
LLIYGVRKMASSEKRYLHRKLDLGELFVVDSGEAEKTFVLATRSKSFVVQ
CVDMAEKKSWMAAFTCCFAEMEKTVLYGKNRTINKDHRLTHVGLWMVREG
EMVRESYLMPPDMPKDKTYGFLSFQDLRLIVDPQEPDRSSMGKRVLSRIL
RRGASLSRFNFKVQSGNPVPCEHVSPDDIHGAVDSDDDDEVSTYSDALSP
CSSASASPYDFDSADTRWGGIGVHGFPVTSTRTNITTTPPLTDDATATDP
SSSTGVAMTRTGMRRASLDTVAPGALNDVGFQTASGFIDGRQSSKWSGIL
SGLRPQGANSTSPKAVPDLHQEKELAALERSLGLMGFRNEAKNGGHTNDS
KPPQARLSPPPLVDTAASAPTGATAVPSTNTIVGGGVAISSNSSSNASAP
GSLHGGRPPKPISPPRSPLSPPISPRLIHCVPSEQHHISPNALFSPAASF
SSESSPFTSYANSNTINCSGSGSSSSSSNNNRLPHGDSARTKSRPSTGKG
AGRGGGGCSSGSSRSSMGSIVVSHEKFGGSVAPAAAAAASASWSNGALLG
PDAESPGGSSSRSRRSSTGGPRPAKAPRSPRFGSLSPPARSEHLNSDSPP
DVFSRSSSPLPHPDLSLPPPSFSSTASSYRVPGNEYVVVLPVSDLGLGIF
LRDENGKVLVGGFRSPKNLSGAGVGGVGGAGGGGGGGGGHGVHAMNPSMR
AGIRLGDSLLKVNGTVVHSVSHTIAVLGESRMEKVIALTLRRGTGVGEGW
PGRTGKVSAGAGARVLSHSPPKPQSKILRIHRDRGTGTK*

mRNA from alignment at chr17:416749..421111+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO17G01360.1 ID=NO17G01360.1|Name=NO17G01360.1|organism=Nannochloropsis oceanica|type=mRNA|length=4363bp|location=Sequence derived from alignment at chr17:416749..421111+ (Nannochloropsis oceanica)
CAGTCCACCTACACGAAGAGCCTACACAGTGGCGAGGGGTAGTAGCTTTG
GAATTGGAGGAAGTTCAAGCGAGAACGACGCCGCTCGACTATCGCACGGG
CACACCTTGCTCATCTCGCGTTGACCCGGGGGCAGGACGACGAAGTACAT
GTGGGACCTCTAGCGGCACCGAACCATCTATCTACAGCTCCATCCCGCAC
GTGTGTCGCGCATCTCGCACCTTATTACTGGGACCAGCTGTTGGAACGGG
ACACGGAGAAATCCCCACAAACAAGTCTTGCTGTGACGCCTTGTACACGC
CTTTCTTCTGCCTCAAATCGCACACACACACAAATGGACCACCCCAGCAG
AAACAGCAGCATAACGTCCATACCGAACAACACTGACAAAGATGGCAGCT
GGGGTCCTGTGCCCAGCTCAAGCCCCCCGCCATCGTCTCCCTCAAACCTA
GTAGGCGTGTCGACCTCCTTGCCTCTAACACCCCGCTCTCGGACCACGCG
CCGCGACCAAGTCGCACGCGAGCTCATGGACTCAGAAAGGACTTTTGTGG
AGCAAATGACGGTACTGACCAAGGTCTTCATCAATCCCTTGCGATGGTGG
AAATTGGAGATCACACAAGGCAGGGAATCGATGCACCCGCCGCTGCCGGA
CGCGCTCCTTCAAGAAATTTTTGGCAATGTTGAGCAGCTGTTGGTTTTCA
ATGCGCATGTAGTGGAGCAATTTGCGGAGCTGCATTGTGGGAATCAGGCG
TTTGGGGGCTTCTTCAAGAAGGCGGCACCCTTTTTTAAGATGTATTCGAG
TTACGTCTCTAACTATGACAGAGCAATGGAGACATTGCTGCATTTGATTG
AGACCCGGCTCGATTTTGCAGCTTTTGTCCGAGGTACGTGTGTGTAGCGA
AGTGTTTCGAATCCTTTGACTGGCTGACTGGCGCAAGCGTTGATCTGTCT
CTCCGATCTCAAGCCTCTTTTGTTTTTCCTTCCCGGGCTGTGGCTATCCT
CTTATCCCATTACCCTTCCTCCTCCTCTCTCATTTCCTTCCACCCCCAGC
CTGCGAACTCCAGGAAGGTTGCAAGGGCCTAAATCTCCGGGCTTATCTCA
TCATGCCTGTGCAGAGAATACCACGCTACAAGCTCTTGCTCACGGAGCTG
CTTAAACACACGTCAGAGGACCACCCTGATTACGAGGTATATGGCACCTG
GAAGAGGGCGGTCAGCAAGAGCACGCAAGCTGCGCTTTTTTTAAAAAATG
TAGCACTGATATTTAAATAAAAACCTGCATTCACTTTACACAACATATAC
ATGTAGGACCTGGAGGCGGCCGTCAAGCTCGTGTCAGGCGTGGTAGGCGC
CATCAATGAAGACATAAAAAGGCAAGAGAGGCGGTTTAAGGTCATCGAGA
TTCAAGAGCAATGGGACACGGTATGTTTCAATATTTACTTTACAGAAGGG
ACTCCCTAACCTTCTCGCCTCCCCCCTTTGATCTTCTCCTTTTCACTCAC
TCATTATCCTCTCCCCTGTACCCTTTCCTTCCAGGTCCTTGTCACGGCTT
CCCGCAAATTCGAAAAGGAAGGGCCACTCATCAAGGTCTGTCGGAAAGGG
CCAAAAACGCGGGAATTCGTTCTCTTCAATGACCTCCTAATCTACGGCGT
CCGCAAAATGGCCTCCTCGGAAAAGCGCTATTTGCATAGGAAGCTTGATT
TGGGTGAGCTGTTCGTTGTGGATAGTGGGGAGGCAGAAAAGACCTTTGTT
TTGGCGACGCGTTCGAAGTCATTTGTTGTGCAATGTGTGGACATGGCCGA
AAAAAAGTCATGGATGGCGGCGTTTACTTGTTGTTTTGCCGAGATGGAGA
AGACGGTCTTGTATGGGAAGAATCGAACAATCAACAAAGACCATCGCTTG
ACCCATGTCGGCCTGTGGATGGTCAGGGAGGGGGAGATGGTGCGAGAATC
CTACCTTATGCCACCTGACATGCCCAAGGATAAAACGTATGGCTTCCTCA
GCTTCCAAGACCTCCGTCTGATTGTCGATCCTCAGGAGCCTGATCGTAGC
AGCATGGGCAAGCGTGTCCTTTCTCGTATCTTGCGGCGGGGGGCAAGCCT
TTCGCGGTTTAATTTTAAGGTCCAGAGTGGGAATCCGGTGCCATGCGAGC
ACGTCTCACCGGACGATATTCATGGAGCGGTTGATTCGGACGACGATGAC
GAAGTGTCGACTTATAGCGATGCCCTCTCCCCATGCAGCTCTGCGAGTGC
CTCCCCCTACGATTTTGATTCAGCGGATACGCGCTGGGGGGGCATTGGCG
TACACGGCTTTCCCGTCACAAGTACTAGGACGAATATTACTACTACTCCT
CCTCTTACTGATGATGCTACGGCGACGGATCCCAGCAGCAGTACGGGTGT
TGCGATGACGAGGACCGGGATGCGAAGGGCGAGCCTCGATACGGTGGCGC
CGGGCGCGCTCAATGACGTGGGGTTCCAGACCGCTTCGGGCTTTATCGAT
GGGAGGTAGGTTTGGCTGACGTGAATTTGGGGCTAGATTTAAATTGTACC
AACCCTGTTGTTTTATCTTCTCCATCTCCTGAATTCCCACCCTCCCTTTG
ATTGCAGACAGTGCTCCATTATCCTAACCCTCTCATTCCCGCCATCCGAT
TTCGCCCTTCTCTCTCTCCTTCCATCCGGACTCCCATCCATACAGACAAA
GCAGCAAATGGAGTGGCATCCTCAGCGGCCTCCGTCCCCAGGGCGCAAAC
TCCACCTCCCCCAAAGCTGTCCCAGACCTTCACCAGGAAAAGGAATTGGC
AGCTCTTGAACGGTCCTTAGGCTTGATGGGGTTCAGAAATGAGGCGAAGA
ACGGAGGGCACACAAACGACAGCAAGCCTCCGCAGGCTCGCCTCTCTCCA
CCTCCGCTCGTTGACACGGCCGCCTCGGCCCCTACAGGTGCCACTGCTGT
CCCAAGTACCAATACCATCGTCGGCGGTGGTGTGGCTATCAGCAGCAACA
GCAGCAGCAATGCCAGTGCCCCGGGATCATTACACGGGGGGCGTCCGCCT
AAACCGATTTCACCTCCTCGGAGCCCCTTGTCGCCTCCCATCTCTCCTCG
TCTGATCCATTGCGTCCCCTCAGAACAACACCATATCTCTCCTAATGCCT
TGTTCTCGCCGGCAGCATCGTTTTCCTCGGAATCGTCTCCCTTTACCTCC
TACGCAAACTCAAACACCATCAATTGCAGCGGCAGTGGCAGCAGCAGCAG
CAGCAGCAACAACAACAGACTTCCACATGGCGACTCGGCACGGACCAAGT
CACGTCCAAGCACAGGCAAGGGGGCTGGTAGGGGTGGGGGTGGCTGCAGC
AGCGGCAGCAGCAGAAGCAGCATGGGCAGTATCGTCGTATCTCACGAGAA
GTTCGGAGGTTCTGTTGCACCTGCTGCTGCTGCTGCTGCTAGTGCTAGCT
GGAGCAATGGAGCCTTATTAGGGCCCGATGCAGAGTCACCCGGTGGCAGC
AGCAGCAGGTCTCGCAGGAGCTCAACGGGAGGTCCACGTCCGGCCAAGGC
CCCCCGCTCTCCTCGCTTCGGTTCGCTCTCTCCCCCCGCCCGCTCCGAGC
ACCTCAACAGTGACAGTCCACCTGACGTCTTCTCTCGTTCATCCTCTCCT
TTGCCTCATCCTGATCTGTCACTACCCCCACCCTCATTCAGCTCCACAGC
CTCCTCCTACCGAGTACCTGGGAACGAGTATGTAGTTGTTCTCCCAGTTT
CTGATTTAGGTTTGGGCATTTTCTTGAGGGATGAGAATGGCAAGGTTTTA
GTGGGTGGATTTCGTTCCCCAAAGAACTTGTCAGGCGCTGGTGTTGGCGG
GGTTGGGGGAGCAGGGGGTGGGGGAGGAGGTGGGGGGGGTCATGGTGTGC
ATGCAATGAACCCATCCATGCGCGCGGGTATCAGGTTGGGAGATTCGTTG
CTCAAAGTAAATGGTACTGTTGTTCATTCGGTGAGTCACACGATTGCTGT
GCTCGGGGAGTCAAGGATGGAAAAGGTGATTGCCCTGACCTTGCGGCGAG
GCACTGGCGTCGGGGAGGGGTGGCCGGGAAGGACTGGGAAAGTCTCTGCG
GGGGCGGGAGCGCGCGTCCTTTCTCATTCGCCCCCCAAGCCTCAGAGCAA
GATTTTGCGAATTCATCGGGATAGAGGGACAGGAACAAAGTAGGCAGAGA
CGAGACGGAAGGAATGGGATGAAGAGAAAAAGATAGGGAGAAAGAGAGAG
AGGAGAGAGAGAAAGAGAGATTAAAAGAGAGAGTATGTACACACAAAACC
ATATTTTTTGCACCCACAAATCTGACAAGTAAATAACGAGAAAGTGGACA
TACGACTACCCCT

Coding sequence (CDS) from alignment at chr17:416749..421111+

>NO17G01360.1 ID=NO17G01360.1|Name=NO17G01360.1|organism=Nannochloropsis oceanica|type=CDS|length=3270bp|location=Sequence derived from alignment at chr17:416749..421111+ (Nannochloropsis oceanica)
ATGGACCACCCCAGCAGAAACAGCAGCATAACGTCCATACCGAACAACAC
TGACAAAGATGGCAGCTGGGGTCCTGTGCCCAGCTCAAGCCCCCCGCCAT
CGTCTCCCTCAAACCTAGTAGGCGTGTCGACCTCCTTGCCTCTAACACCC
CGCTCTCGGACCACGCGCCGCGACCAAGTCGCACGCGAGCTCATGGACTC
AGAAAGGACTTTTGTGGAGCAAATGACGGTACTGACCAAGGTCTTCATCA
ATCCCTTGCGATGGTGGAAATTGGAGATCACACAAGGCAGGGAATCGATG
CACCCGCCGCTGCCGGACGCGCTCCTTCAAGAAATTTTTGGCAATGTTGA
GCAGCTGTTGGTTTTCAATGCGCATGTAGTGGAGCAATTTGCGGAGCTGC
ATTGTGGGAATCAGGCGTTTGGGGGCTTCTTCAAGAAGGCGGCACCCTTT
TTTAAGATGTATTCGAGTTACGTCTCTAACTATGACAGAGCAATGGAGAC
ATTGCTGCATTTGATTGAGACCCGGCTCGATTTTGCAGCTTTTGTCCGAG
CCTGCGAACTCCAGGAAGGTTGCAAGGGCCTAAATCTCCGGGCTTATCTC
ATCATGCCTGTGCAGAGAATACCACGCTACAAGCTCTTGCTCACGGAGCT
GCTTAAACACACGTCAGAGGACCACCCTGATTACGAGGACCTGGAGGCGG
CCGTCAAGCTCGTGTCAGGCGTGGTAGGCGCCATCAATGAAGACATAAAA
AGGCAAGAGAGGCGGTTTAAGGTCATCGAGATTCAAGAGCAATGGGACAC
GGTCCTTGTCACGGCTTCCCGCAAATTCGAAAAGGAAGGGCCACTCATCA
AGGTCTGTCGGAAAGGGCCAAAAACGCGGGAATTCGTTCTCTTCAATGAC
CTCCTAATCTACGGCGTCCGCAAAATGGCCTCCTCGGAAAAGCGCTATTT
GCATAGGAAGCTTGATTTGGGTGAGCTGTTCGTTGTGGATAGTGGGGAGG
CAGAAAAGACCTTTGTTTTGGCGACGCGTTCGAAGTCATTTGTTGTGCAA
TGTGTGGACATGGCCGAAAAAAAGTCATGGATGGCGGCGTTTACTTGTTG
TTTTGCCGAGATGGAGAAGACGGTCTTGTATGGGAAGAATCGAACAATCA
ACAAAGACCATCGCTTGACCCATGTCGGCCTGTGGATGGTCAGGGAGGGG
GAGATGGTGCGAGAATCCTACCTTATGCCACCTGACATGCCCAAGGATAA
AACGTATGGCTTCCTCAGCTTCCAAGACCTCCGTCTGATTGTCGATCCTC
AGGAGCCTGATCGTAGCAGCATGGGCAAGCGTGTCCTTTCTCGTATCTTG
CGGCGGGGGGCAAGCCTTTCGCGGTTTAATTTTAAGGTCCAGAGTGGGAA
TCCGGTGCCATGCGAGCACGTCTCACCGGACGATATTCATGGAGCGGTTG
ATTCGGACGACGATGACGAAGTGTCGACTTATAGCGATGCCCTCTCCCCA
TGCAGCTCTGCGAGTGCCTCCCCCTACGATTTTGATTCAGCGGATACGCG
CTGGGGGGGCATTGGCGTACACGGCTTTCCCGTCACAAGTACTAGGACGA
ATATTACTACTACTCCTCCTCTTACTGATGATGCTACGGCGACGGATCCC
AGCAGCAGTACGGGTGTTGCGATGACGAGGACCGGGATGCGAAGGGCGAG
CCTCGATACGGTGGCGCCGGGCGCGCTCAATGACGTGGGGTTCCAGACCG
CTTCGGGCTTTATCGATGGGAGACAAAGCAGCAAATGGAGTGGCATCCTC
AGCGGCCTCCGTCCCCAGGGCGCAAACTCCACCTCCCCCAAAGCTGTCCC
AGACCTTCACCAGGAAAAGGAATTGGCAGCTCTTGAACGGTCCTTAGGCT
TGATGGGGTTCAGAAATGAGGCGAAGAACGGAGGGCACACAAACGACAGC
AAGCCTCCGCAGGCTCGCCTCTCTCCACCTCCGCTCGTTGACACGGCCGC
CTCGGCCCCTACAGGTGCCACTGCTGTCCCAAGTACCAATACCATCGTCG
GCGGTGGTGTGGCTATCAGCAGCAACAGCAGCAGCAATGCCAGTGCCCCG
GGATCATTACACGGGGGGCGTCCGCCTAAACCGATTTCACCTCCTCGGAG
CCCCTTGTCGCCTCCCATCTCTCCTCGTCTGATCCATTGCGTCCCCTCAG
AACAACACCATATCTCTCCTAATGCCTTGTTCTCGCCGGCAGCATCGTTT
TCCTCGGAATCGTCTCCCTTTACCTCCTACGCAAACTCAAACACCATCAA
TTGCAGCGGCAGTGGCAGCAGCAGCAGCAGCAGCAACAACAACAGACTTC
CACATGGCGACTCGGCACGGACCAAGTCACGTCCAAGCACAGGCAAGGGG
GCTGGTAGGGGTGGGGGTGGCTGCAGCAGCGGCAGCAGCAGAAGCAGCAT
GGGCAGTATCGTCGTATCTCACGAGAAGTTCGGAGGTTCTGTTGCACCTG
CTGCTGCTGCTGCTGCTAGTGCTAGCTGGAGCAATGGAGCCTTATTAGGG
CCCGATGCAGAGTCACCCGGTGGCAGCAGCAGCAGGTCTCGCAGGAGCTC
AACGGGAGGTCCACGTCCGGCCAAGGCCCCCCGCTCTCCTCGCTTCGGTT
CGCTCTCTCCCCCCGCCCGCTCCGAGCACCTCAACAGTGACAGTCCACCT
GACGTCTTCTCTCGTTCATCCTCTCCTTTGCCTCATCCTGATCTGTCACT
ACCCCCACCCTCATTCAGCTCCACAGCCTCCTCCTACCGAGTACCTGGGA
ACGAGTATGTAGTTGTTCTCCCAGTTTCTGATTTAGGTTTGGGCATTTTC
TTGAGGGATGAGAATGGCAAGGTTTTAGTGGGTGGATTTCGTTCCCCAAA
GAACTTGTCAGGCGCTGGTGTTGGCGGGGTTGGGGGAGCAGGGGGTGGGG
GAGGAGGTGGGGGGGGTCATGGTGTGCATGCAATGAACCCATCCATGCGC
GCGGGTATCAGGTTGGGAGATTCGTTGCTCAAAGTAAATGGTACTGTTGT
TCATTCGGTGAGTCACACGATTGCTGTGCTCGGGGAGTCAAGGATGGAAA
AGGTGATTGCCCTGACCTTGCGGCGAGGCACTGGCGTCGGGGAGGGGTGG
CCGGGAAGGACTGGGAAAGTCTCTGCGGGGGCGGGAGCGCGCGTCCTTTC
TCATTCGCCCCCCAAGCCTCAGAGCAAGATTTTGCGAATTCATCGGGATA
GAGGGACAGGAACAAAGTAG

Synonyms

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