NO17G01340, NO17G01340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G01340 vs. NCBI_GenBank
Match: EWM24240.1 (hypothetical protein Naga_100020g68 [Nannochloropsis gaditana]) HSP 1 Score: 412.1 bits (1058), Expect = 1.500e-111 Identity = 202/290 (69.66%), Postives = 236/290 (81.38%), Query Frame = 0 Query: 29 LAFFGNWGKPFVPKVPS-AAXXXXXXXXXXKKLVDYSPRLPKLYGGWFDNTLVDQASAAITAALKDGIQTSEVLFPPLPNMEEREFGTSLNMKYNRAVATRLGGPDNILRKQSVAYANVDLASRIATKLRKRTLLLTYDNAVDSSIIKLSKQAEIMRISSADLKACITANDVLLALSPGVGSHWTKAAGLQTEAPVVAMNAPFSLSYDIAQGGKWEPIYVVKRVTKGWIYRAYPSGFKVYLDKPDGTVELIKEFDKGVIPKLREVAAVVRDESQARGYAISNDRYLTQRL 318 LAFFGNW S KLVD P LPKLYGGWFDNTLV+QASAAI AA++DG++TSEVLFPPLPNMEEREFGT LNM YN+AVA RL GPDNILR+QSVAYANVD+ASR+A K KRTL+LTYD AVD +IIK+S +A + RI++ D++A AND++ ALSPG GS W+KA+GL+T+APVVA+NAPFSL+YDIAQGGKWEPIYVVKRVTKGW++RAYP FKVYLD PDG+VELIKEF GV+PKLREV+++VR+ESQ RGYA NDRYLTQRL Sbjct: 43 LAFFGNWATQAQASTSSTGTSRSTLATPPPSKLVDKGPSLPKLYGGWFDNTLVNQASAAINAAVRDGVKTSEVLFPPLPNMEEREFGTELNMNYNKAVAARLKGPDNILRRQSVAYANVDIASRVAGKTGKRTLILTYDGAVDPNIIKISSKAMLTRINALDVEAASRANDIIFALSPGTGSQWSKASGLKTDAPVVAINAPFSLNYDIAQGGKWEPIYVVKRVTKGWVFRAYPHEFKVYLDTPDGSVELIKEFRGGVVPKLREVSSIVREESQRRGYAALNDRYLTQRL 332
BLAST of NO17G01340 vs. NCBI_GenBank
Match: XP_002184242.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44420.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 161.8 bits (408), Expect = 3.600e-36 Identity = 95/274 (34.67%), Postives = 154/274 (56.20%), Query Frame = 0 Query: 60 LVDYSPRLPKLYGGWFDNTLVDQASAAITAALKDGIQTSEVLFPPLPNMEEREFGTSLNMKYNRAVATR----LGG--PDNILRKQSVAYANVDLASRIATKL-------RKRTLLLTYDNAVDSSIIKLSKQAEIMRISSADLKACIT-ANDVLLALSPGVGSHW--TKAAGLQTEAPVVAMNAPFSLSYDIAQGGKWEPIYVVKRVTKGWIYRAYPSGFKVYLDKPDGTVELIKEFDKGVIPKLREVAAVVRDESQARGYAISNDRYLTQRL 318 LVD +P LY GW ++ + QAS A+ A+ G++ EV FPP+PN+EE +FGT LN + V R GG P + + +Q +AY+N+ A +IA + K T+L ++ +KL + + + R +S +A N+ ++ ++PG W +A + P V +N +S +YD+ +E Y +KR++KGW++RA+P ++ YL+KPDG VEL+ + + P L+EVA VR+ES R YA+ NDR+++ RL Sbjct: 26 LVDGGKNMPALYNGWMNDQIAKQASTAVGKAIASGVKQIEVNFPPVPNVEEAKFGTPLNQLFGTKVVAREIGFTGGYKPGSDVSRQLIAYSNMYWAKKIAPAIGGGIMGGSKVTVL-----TAEAVNLKLIQNSGVGRTASLSPRASQEFQNEAVIVVNPGGEEQWERIRAVHASDDIPFVILNNAYSTTYDLGNKRGYEEAYFLKRISKGWVFRAFPGPWQAYLEKPDGNVELLASYK--IKPSLKEVATAVREESFKR-YAMGNDRWMSGRL 291
BLAST of NO17G01340 vs. NCBI_GenBank
Match: XP_002289259.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92796.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 159.8 bits (403), Expect = 1.400e-35 Identity = 93/272 (34.19%), Postives = 153/272 (56.25%), Query Frame = 0 Query: 60 LVDYSPRLPKLYGGWFDNTLVDQASAAITAALKDGIQTSEVLFPPLPNMEEREFGTSLNMKYNRAVATR----LGG--PDNILRKQSVAYANVDLASRIATKLRKRTL------LLTYDNAVDSSIIKLSKQAEIMRISSADLKACITANDVLLALSPGVGSHWTK--AAGLQTEAPVVAMNAPFSLSYDIAQGGKWEPIYVVKRVTKGWIYRAYPSGFKVYLDKPDGTVELIKEFDKGVIPKLREVAAVVRDESQARGYAISNDRYLTQRL 318 L+D +PK+Y WF++ + QA+AAI+ A+ G + EV FPP+PN++E +FGT LN K+ ++ R GG P + L + + YAN+ A RIA ++ L +LT + I L +I + + +N+ ++ ++PG W + +A Q P+V +N +S +YD+ +E +Y +KR++KGW++R++P ++ YL+KPDG VEL+K + P LREV+ +V + S R YA+ NDRY+ RL Sbjct: 25 LIDGGKGMPKIYDAWFNDQITKQANAAISRAVASGKRIMEVQFPPVPNVDEVKFGTPLNQKFGQSQLARDLKCKGGYKPGSKLSRNLLPYANIYWAKRIAGAVKGGALGGKPVGVLTAEAVDFDEIGNLGDLTRTGKIFTDKARKEGRSNEAMICINPGGEETWERLVSAHGQPNCPLVVLNNSYSTTYDLGNKKNFEEVYYLKRISKGWVFRSFPGDWEAYLEKPDGNVELLKSYK--TKPSLREVSELVGETSFQR-YAMFNDRYMGGRL 293
BLAST of NO17G01340 vs. NCBI_GenBank
Match: OEU09928.1 (hypothetical protein FRACYDRAFT_248179 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 157.9 bits (398), Expect = 5.100e-35 Identity = 97/278 (34.89%), Postives = 158/278 (56.83%), Query Frame = 0 Query: 61 VDYSPRLPKLYGGWFDNTLVDQASAAITAALKDGIQTSEVLFPPLPNMEEREFGTSLNMKYNRAVATR----LGG--PDNILRKQSVAYANVDLASRIATK-------LRKRTLLLTYDNAVDSSIIK----LSKQAEIMR-ISSADLKACITANDVLLALSPGVGSHWTKAAGLQTE---APVVAMNAPFSLSYDIAQGGKWEPIYVVKRVTKGWIYRAYPSGFKVYLDKPDGTVELIKEFDKGVIPKLREVAAVVRDESQARGYAISNDRYLTQRL 318 +D +PKLY G+FD+ + QA+ A+ AA+ G + EV P +PN+EE +FGT LN K+++ + T+ GG P + + +Q ++YAN+ A +I+ + +++ + +D +IK ++K I + S + K T +D + ++PG W + T+ P V +N +S +Y + K+E Y +KR+TKGWIYRAYP +K YL+ PDG+ EL+K F+ P+LR A +VR+ES R YAISNDR+++ R+ Sbjct: 46 LDGGKDIPKLYNGYFDSQIAKQAATAVGAAISSGKKNIEVNLPAVPNLEEVKFGTPLNQKFSKTIVTKDLKVKGGYYPGSDIARQQLSYANMYWAKQISGAVSGGIGGIGGKSVTVLSAEPLDYELIKNKGGMNKIGPIRTGLGSGNKKD--TLSDACIVINPGGEETWDRLRQSLTKNKNCPFVVLNNAYSTTYGLGNKRKYEEAYYLKRITKGWIYRAYPGPWKAYLEAPDGSTELLKTFN--TKPELRVAAELVREESFKR-YAISNDRWMSGRM 318
BLAST of NO17G01340 vs. NCBI_GenBank
Match: GAX24398.1 (hypothetical protein FisN_4Lh533 [Fistulifera solaris]) HSP 1 Score: 153.3 bits (386), Expect = 1.300e-33 Identity = 92/265 (34.72%), Postives = 146/265 (55.09%), Query Frame = 0 Query: 60 LVDYSPRLPKLYGGWFDNTLVDQASAAITAALKDGIQTSEVLFPPLPNMEEREFGTSLNMKYNRAVATR----LGG--PDNILRKQSVAYANVDLASRIATKLRKRTL---LLTYDNAVDSSIIKLSKQAEIMRISSADLKACITAND--VLLALSPGVGSHWTK-AAGLQTEAPVVAMNAPFSLSYDIAQGGKWEPIYVVKRVTKGWIYRAYPSGFKVYLDKPDGTVELIKEFDKGVIPKLREVAAVVRDESQARGYAISNDRY 313 L+D +PK Y WFD+ +V QAS A+ A+ G + EV FP +PN+EE +FGTSLN K+ V R GG P + + + +AY+NV A +IA + L +T ++ ++ + + +I S + + L+A++PG W + + +P+V +N +S +Y + +E Y VKR++KGWI+R +P +K YL+KPDG+ EL++ + P+L VA +VRDES R YAI+NDR+ Sbjct: 20 LIDGGTDIPKFYKSWFDDQIVKQASTAVEKAIAAGNKKIEVNFPAVPNVEEAKFGTSLNQKFGTTVVARELKIAGGYTPGSDIARNLIAYSNVYWAKKIAPAVGGGLLGGRPVTVVTPEQVNMKQIQSRGAMSQILSLKMSKGVEVKQGGALIAINPGGEETWDRIQSAFGNGSPMVVLNNAYSTTYGLGNKRGYEEAYFVKRISKGWIFRCFPGPWKAYLEKPDGSCELLETYSSK--PELNVVATLVRDESFKR-YAINNDRW 281
BLAST of NO17G01340 vs. NCBI_GenBank
Match: GAX25983.1 (hypothetical protein FisN_4Hh533 [Fistulifera solaris]) HSP 1 Score: 150.2 bits (378), Expect = 1.100e-32 Identity = 92/265 (34.72%), Postives = 144/265 (54.34%), Query Frame = 0 Query: 60 LVDYSPRLPKLYGGWFDNTLVDQASAAITAALKDGIQTSEVLFPPLPNMEEREFGTSLNMKYNRAVATR----LGG--PDNILRKQSVAYANVDLASRIATKLRKRTL---LLTYDNAVDSSIIKLSKQAEIMRISSADLKACITAND--VLLALSPGVGSHWTK-AAGLQTEAPVVAMNAPFSLSYDIAQGGKWEPIYVVKRVTKGWIYRAYPSGFKVYLDKPDGTVELIKEFDKGVIPKLREVAAVVRDESQARGYAISNDRY 313 L+D +P Y WFD+ +V QAS A+ A+ G + EV FP +PN+EE +FGTSLN K+ V R GG P + + + +AY+NV A +IA + L +T +I ++ + + +I S + + L+A++PG W + + +P+V +N +S +Y + +E Y VKR++KGWI+R +P +K YL+KPDG+ EL++ + P+L VA VRDES R YAI+NDR+ Sbjct: 20 LIDGGTDIPTFYKSWFDDQIVKQASTAVEKAIAAGNKKIEVNFPAVPNVEEAKFGTSLNQKFGTTVVARELKIAGGYTPGSDIARNLIAYSNVYWAKKIAPAVGGGLLGGRPVTVVTPEQVNIKQIQSRGAMSQILSLKMSKGVEVKQGGALIAINPGGEETWDRIQSAFGNGSPMVVLNNAYSTTYGLGNKRGYEEAYFVKRISKGWIFRCFPGPWKAYLEKPDGSCELLETY--STKPELNVVATRVRDESFKR-YAINNDRW 281
BLAST of NO17G01340 vs. NCBI_GenBank
Match: XP_009039016.1 (hypothetical protein AURANDRAFT_65647 [Aureococcus anophagefferens] >EGB06445.1 hypothetical protein AURANDRAFT_65647 [Aureococcus anophagefferens]) HSP 1 Score: 146.7 bits (369), Expect = 1.200e-31 Identity = 93/283 (32.86%), Postives = 146/283 (51.59%), Query Frame = 0 Query: 64 SPRLPKLYGGWFDNTLVDQASAAITAALKDGIQTSEVLFPPLPNMEEREFGTSLNMKYNRAVATRLGGPDN----------------------ILRKQSVAYANVDLASRIATKL---RKRTLLLTYDNAVDSSIIKLSKQAEIMRISSADLKACITANDVLLALSPGVGSHWTKA--AGLQTEAPVVAMNAPFSLSYDIAQGGKW---EPIYVVKRVTKGWIYRAYPSGFKVYLDKPDGTVELIKEFDKGVIPKLREVAAVVRDESQARGYAISNDRYLTQR 317 +P PK+Y WF + + A + A L+ G+Q EV P+PN+EE +FGT LN ++ VA LG D ++++ V+YANV+ A R+A RK +LL S KL K + + S D+ + + D ++ ++PGV + WT+ G APVV +N+ S Y + GG E +Y +K V+KG++YRA+P+ ++V+LDKPDGT E +K F P L E++ + R SQ++ AI N+++ R Sbjct: 57 APSFPKIYESWFGDDMAGAMRAGVGAGLRSGLQFMEVRTQPVPNLEEAKFGTPLNERFQIEVARNLGLSDGPSAYVDDEAARKNVRRFDKNYMLVKRDPVSYANVEWARRVAPAFGSKRKIWVLLAEGRVDTSGCAKLPKNFVVKPLESPDVD--VQSGDAVIVVAPGVTASWTRGYDIGAAAGAPVVFLNSQLSEKYQL--GGPLADVEEVYYLKPVSKGFVYRAWPNPWEVWLDKPDGTQERLKVF-SDERPTLGELSQITRSASQSKYGAIFNEKFTNDR 334
BLAST of NO17G01340 vs. NCBI_GenBank
Match: CBJ32675.1 (immunophilin [Ectocarpus siliculosus]) HSP 1 Score: 137.1 bits (344), Expect = 9.400e-29 Identity = 87/261 (33.33%), Postives = 140/261 (53.64%), Query Frame = 0 Query: 67 LPKLYGGWFDNTLVDQASAAITAALKDGIQTS---EVLFPPLPNMEEREFGTSLNMKYNRAVATRLG----GPDNILRKQSVAYANVDLASRIATKLRKRTLLLTYDN-AVDSSIIKLSKQAEIMRISSADLKACITANDVLLALSPGVGSHWTKAAGLQTEAPVVAMNAPFSLSYDIAQGGKWEPI---YVVKRVTKGWIYRAYPSGFKVYLDKPDGTVELIKEFDKGVIPKLREVAAVVRDESQARGYAISNDRYLTQR 317 +PKLY GWF T Q I A K ++T E+ F P+PN+EE +FGT+ N + VA LG P + +R V Y+N+ A ++A L + T D D+S+IK +A+ + + A + D ++ ++PG + W A E V+ +NAP S +YD+ GG + + Y +KRV+KG+++R P ++ L+KP G +E++ ++++ P LR VA VVR ES R + +SNDR+ + Sbjct: 56 MPKLYEGWFKKT--GQIEKDIVAGAKSALRTGKPVEICFFPVPNLEEVQFGTATNKAFGTEVAKDLGMGEYKPGSTIRTYLVQYSNIYWAKKLADGLGGTCWVATSDGLKKDTSVIKKPGKAKFCSLRKPETFAAMKKGDTVIVVAPGPTAEWASCAQRFKEQKVIFLNAPLSETYDL--GGPLKDLEQGYYLKRVSKGYVFRVSPKPWEALLEKPGGGLEILGKYNEK--PLLRNVAKVVRSESMKR-FGMSNDRWTNDK 309
BLAST of NO17G01340 vs. NCBI_GenBank
Match: XP_005715468.1 (unnamed protein product [Chondrus crispus] >CDF35649.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 136.7 bits (343), Expect = 1.200e-28 Identity = 89/264 (33.71%), Postives = 143/264 (54.17%), Query Frame = 0 Query: 67 LPKLYGGWF--DNTLVDQASAAITAALKDGIQTSEVLFPPLPNMEEREFGTSLNMKYNRAVATRLGGPDN----ILRKQSVAYANVDLASRIAT--KLRKRTL-LLTYDNAVDSSIIKLSKQAEIMRISSADLKACITANDVLLALSPGVGSHWTKAAGLQT---EAPVVAMNAPFSLSYDIA--QGG---KWEPIYVVKRVTKGWIYRAYPSGFKVYLDKPDGTVELIKEFDKGVIPKLREVAAVVRDESQARGYAISNDRYL 314 +PKLY WF D+ L QA A+ A G++ E+ +P +PN+EE E GT LN ++ + V+ LG ++++ + N+ A RIA+ R RT+ L+ D+ + + + + K I +DV++ L P S W K A L E VV +N+ F+ +Y + + G EP+Y +KRVT+G+++R++P + YL+KPD +VE++ EF+K +PKL E+A VVR+ S R NDRY+ Sbjct: 96 MPKLYDAWFEPDHELASQACCAVDRAYSSGVRKMELQWPTVPNLEEIEAGTKLNFEFGKQVSRNLGMATQSDYPLIKRYLAQFCNLYWAKRIASCESFRDRTVWALSCDDVSKNRAEGYLENVRPGSVRNPPKKGEIGKDDVVMILDPRDTSAWVKGAKLLPQGGEGVVVFLNSQFNETYGLTGPRNGVLKGTEPVYFLKRVTRGYVFRSFPEPWLAYLEKPDMSVEVVGEFEK--LPKLSEIAKVVREVSNNRYGGFYNDRYV 357
BLAST of NO17G01340 vs. NCBI_GenBank
Match: XP_005828043.1 (hypothetical protein GUITHDRAFT_48967, partial [Guillardia theta CCMP2712] >EKX41063.1 hypothetical protein GUITHDRAFT_48967, partial [Guillardia theta CCMP2712]) HSP 1 Score: 124.4 bits (311), Expect = 6.300e-25 Identity = 80/253 (31.62%), Postives = 134/253 (52.96%), Query Frame = 0 Query: 67 LPKLYGGWF-DNTLVDQASAAITAALKDGIQTSEVLFPPLPNMEEREFGTSLNMKYNRAVATRLGGPDN----ILRKQSVAYANVDLASRIATKLRKRTLLLTY-DNAVDSSIIKLSKQAEIMRISSADLKACITANDVLLALSPGVGSHWTKAAGLQ-TEAPVVAMNAPFSLSYDIAQGGKWEPIYVVKRVTKGWIYRAYPSGFKVYLDKPDGTVELIKEFDKGVIPKLREVAAVVRDESQARGYAISNDRY 313 +P LY GWF + DQ A+ AL DG+ EV FPP+PN+EE +FGT+LN ++ + LG D +R+ + +AN+ + +A + + + Y D + + I R+ + + ++ + ++PG S W KA +P++ +N D + G E +Y +KR++KGW++R YP ++ ++KPDGTVE + ++K P LREV+ VVR+ S + ++I NDRY Sbjct: 1 MPTLYNGWFWTGEVRDQMLKAVGQALADGLTRMEVNFPPVPNLEEVDFGTALNQQFAIEIRDVLGMEDQKYKIEVRRSLIDFANLYWSRALAAVAGGQPVYVQYCDQTSKKNANSPGENVWIGRLETIP-RTLTERQELSIVVNPGDVSQWKKALSYSGPSSPLIFLNRESFAQRDGSTKGV-EQVYYLKRISKGWVFRQYPGPWQALVEKPDGTVECVATYNKR--PLLREVSKVVREYS-FQQFSIFNDRY 248 The following BLAST results are available for this feature:
BLAST of NO17G01340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 12
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G01340 ID=NO17G01340|Name=NO17G01340|organism=Nannochloropsis oceanica|type=gene|length=1178bpback to top protein sequence of NO17G01340.1 >NO17G01340.1-protein ID=NO17G01340.1-protein|Name=NO17G01340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=318bpback to top Synonyms
Publications
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