NO17G01070, NO17G01070 (gene) Nannochloropsis oceanica

Overview
NameNO17G01070
Unique NameNO17G01070
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1968
Alignment locationchr17:335819..337786 +

Link to JBrowse

Properties
Property NameValue
DescriptionIntraflagellar transport protein 81 homolog
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:335819..337786 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0060271cilium assembly
GO:0042073intraciliary transport
GO:0060271cilium assembly
GO:0042073intraciliary transport
Vocabulary: Molecular Function
TermDefinition
GO:0015631tubulin binding
GO:0015631tubulin binding
Vocabulary: Cellular Component
TermDefinition
GO:0030992intraciliary transport particle B
GO:0030992intraciliary transport particle B
GO:0005929cilium
Vocabulary: INTERPRO
TermDefinition
IPR029600IFT81
Homology
BLAST of NO17G01070 vs. NCBI_GenBank
Match: CBJ33391.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 142.5 bits (358), Expect = 4.400e-30
Identity = 110/307 (35.83%), Postives = 156/307 (50.81%), Query Frame = 0
Query:   13 LQSIVTRLHEPPFSLSFPGGVHDLAAEPPNALLQLLYHILSYLEPCMALDVKTASEDERVARTVDFLSMLKCPFLMPATDEEGEAMLVQGLLLGDKATLFPVLAWCLNNLSHLHRRAYLGRYLMPVDVPFDHSQTQDPTLADLHARFRGLQEEFTSVHKAFEEVRAAIGTTNSCEIRAQIKQLEEEKHQLEENVERMARVGQREVGFNEMLSLTRAVREEEEDERRLRGKLAEERHAFEISERRVQALGLALEEEGKRRRG--RKGGRSRTPFDIQDQATAEMLVEELQEEVRRLRYQVTEQLPLEI 318
            +Q IV +L+EPPFS        D   + P  LLQ L  I + ++P   +  +    D    R + FL MLK P  +P  + EG     +GL +GDK  ++P + WCL  L  L +RAYL RYLMPV+VP +    QD  L DLH   R LQ EF + HK  ++ R         E+R +I QLE+EK QL E + ++      E GF EML +T  +R+ +E+   L  K  ++R     +E R         E+ +RR G  R+G  S T        TA  ++ +LQ EV  L  ++T+ LP EI
Sbjct:    4 IQFIVDKLNEPPFSKDLRLVTFD--EKSPADLLQQLNEIFTAIDP-QQMSEQDEPGDASTTRMMSFLVMLKFP--IPDHEREG---FRRGLAVGDKEVVYPAMHWCLQRLPQLKKRAYLARYLMPVEVPMEF--MQDQALIDLHESHRQLQAEFKATHKQVDQTRNT--DLRPGELRTEIGQLEDEKKQLTEKISKLKANVSEEPGFAEMLDVTSRLRKAQEEMAELGAKSIQQRGQLHQAETRA--------EDARRRLGVLRQGTASAT--------TAAAVLGQLQREVAALDNKLTQVLPTEI 282          
BLAST of NO17G01070 vs. NCBI_GenBank
Match: XP_002998291.1 (Intraflagellar Transport Protein 81 [Phytophthora infestans T30-4] >EEY70637.1 Intraflagellar Transport Protein 81 [Phytophthora infestans T30-4])

HSP 1 Score: 135.6 bits (340), Expect = 5.400e-28
Identity = 162/609 (26.60%), Postives = 277/609 (45.48%), Query Frame = 0
Query:   13 LQSIVTRLHEPPFSLSFPGGVHDLAAEPPN-ALLQLLYHILSYLEPC--MALDVKTASEDERVARTVDFLSMLKCPFLMPATDEEGEAMLVQGLLLGDKATLFPVLAWCLNNLSHLHRRAYLGRYLMPVDVPFDHSQTQDPTLADLHARFRGLQEEFTSVHKAFEEVRAAIGTTNSCEIRAQIKQLEEEKHQLEENVERMARVGQREVGFNEMLSLTRAVREEEEDERRLRGKLAEERHAFEISERRVQALGLALEEEGKRRRGRKGGRSRTPFDIQDQATAEMLVEELQEEVRRLRYQVTEQLPLEIEKAQLYFGRKEGIEGRHQHQNQQRQQLERVGRE---------DMEKVVYDVKRAELHVQYWKAKIDEKIIKSG-------GAINPSSNNGKRKAEEGRRERGKERGSDDKFLHLRE--RALVAAIAG---MEKE------GELEXXXXXXXXXXXXLDRLSVDRRVHEQAKERLESQITSREGY--PLYQGAGAKAAVAARAERGVEVVGVTRRSMKDAEGCXXXXXXXXXRGTQDELTEALRKINEELREEKRRLQPLVKVLKEGRKEAGILEEEHRLRKAQYERVMMMSRREGVKEDRE 590
            LQ IV  L++ PF L       D   E  N  LLQ+L+ +   ++P     +D++  +++ R  R ++FL +LK P      D +G     + L+ GD+ T++ +L W L +LS   +RAYLGR+L P++VP ++    D +L  ++  ++ LQ +F +VHK  +++RA+   +   E+R +I QLEEE HQL E +  + +    + GF E+LS T A+R+E+E++ +L  +            +R Q L L+L E  KR R  +         +   AT E L E LQ +V R    +T   P E                  + Q +  Q+LER   E         DME  V  ++RA   +Q ++ +I +  I  G             +N   RK  E   E  + R    + +   E   A +A+I+G   M +E        L             L  L+ +  V  + ++ L+S+    EG+   L +  G    +A + +  ++ + V    +   +G            T +E++  +  IN+ L+E K +L P +K L+  R+    +E+ +  RKAQY+   +    E +K ++E
Sbjct:    4 LQLIVEHLNKEPFRLGLTLVAFD---EKSNFELLQILHEVFVEIDPTRHSGVDLRAEADEARAQRYLEFLQLLKFPL---PRDIDG---FREALVHGDRQTIYTLLHWALKSLSAHQKRAYLGRFLAPLNVPQEY--FGDGSLNAMYEHYQQLQNQFKAVHKEVDQLRAS--KSRPGELRREISQLEEESHQLTEKIANLKKKTTSDPGFQELLSATSALRKEQEEQAKLADR------------KRDQLLSLSLAE--KRAREAEARLQDLRASLSQDATPEQLFERLQAQVTRNSDVLTTMFPAEF-----------------RTQQETLQRLERTLSEPPKTEHDIADMEDEVQALRRA---IQQFQTQIADAQIAQGSGEEDKLAVFRQHANLQARKLAEKEEELEQLRAEKQRLVRSTEELEAKLASISGNKFMSREEFKQYATTLRNKTNQYKKVKAELAELTAESVVLHRTEQLLKSKDADLEGFLRDLERQKGVSGFLATQDK--IDDISVQNARVNALKG-----------ETLEEISRVVTDINQALKERKNQLAPQIKELRSVRQRYQEMEQVYLERKAQYDHTAVGLEAERLKLEQE 552          
BLAST of NO17G01070 vs. NCBI_GenBank
Match: ETI33142.1 (hypothetical protein F443_20151 [Phytophthora parasitica P1569] >ETM33391.1 hypothetical protein L914_19374 [Phytophthora parasitica])

HSP 1 Score: 132.1 bits (331), Expect = 5.900e-27
Identity = 164/609 (26.93%), Postives = 280/609 (45.98%), Query Frame = 0
Query:   13 LQSIVTRLHEPPFSLSFPGGVHDLAAEPPN-ALLQLLYHILSYLEPC--MALDVKTASEDERVARTVDFLSMLKCPFLMPATDEEGEAMLVQGLLLGDKATLFPVLAWCLNNLSHLHRRAYLGRYLMPVDVPFDHSQTQDPTLADLHARFRGLQEEFTSVHKAFEEVRAAIGTTNSCEIRAQIKQLEEEKHQLEENVERMARVGQREVGFNEMLSLTRAVREEEEDERRLRGKLAEERHAFEISERRVQALGLALEEEGKRRRGRKGGRSRTPFDIQDQATAEMLVEELQEEVRRLRYQVTEQLPLEIEKAQLYFGRKEGIEGRHQHQNQQRQQLERVGRE---------DMEKVVYDVKRAELHVQYWKAKIDEKIIKSG-------GAINPSSNNGKRKAEEGRRERGKERGSDDKFLHLRE--RALVAAIAG---MEKE------GELEXXXXXXXXXXXXLDRLSVDRRVHEQAKERLESQITSREGY--PLYQGAGAKAAVAARAERGVEVVGVTRRSMKDAEGCXXXXXXXXXRGTQDELTEALRKINEELREEKRRLQPLVKVLKEGRKEAGILEEEHRLRKAQYERVMMMSRREGVKEDRE 590
            LQ IV  L++ PF L       D   E  N  LLQ+L+ +   ++P     +D++  +++ R  R ++FL +LK  F +P  D +G     + L  GD+ T++ +L W L +L    +RAYLGR+L P++VP ++    D +L  ++ +++ LQ +F +VHK  +++RA+   +   E+R +I QLEEE HQL E +  + +    + GF E+L+ T A+R+E+E++     KLAE         +R Q L L+L E  KR R  +         +   AT E L E LQ +V R    +T + P E                  + Q +  Q+LER   E         DME  V  ++RA   +Q ++ +I +  +  G             +N   RK  E   E  + R    + +   E   A +A+I+G   M +E        L             L  L+ +  V  + ++ L+S+    EG+   L +  G    +A + +  ++ V V    +   +G            T +E++  +  IN+ L+E K +L P +K L+  R+    +E+ +  RKAQY+   +    E +K ++E
Sbjct:    4 LQLIVENLNKEPFRLGLTLVAFD---EKSNFELLQILHEVFVEIDPTRHSGVDLRAEADEVRAQRYLEFLQLLK--FQLP-RDLDG---FREALAHGDRQTIYTLLHWALKSLPAHQKRAYLGRFLAPLNVPQEY--FGDGSLNAMYEQYQQLQNQFKTVHKEVDQLRAS--KSRPGELRREISQLEEESHQLTEKIANLKKKTTSDPGFQELLAATSALRKEQEEQ----AKLAE--------RKRDQLLSLSLAE--KRAREAEARLQDLRTSLSQDATPEQLFERLQAQVARNSEILTTKFPAEF-----------------RTQQETLQRLERALSEPPKTEHDIADMEDEVQALRRA---IQQYQTQIADAQVAQGSGEEDKLAVFRQHANLQARKLAEKEEELEQLRADKQRLVRSTEELEAKLASISGNKFMSREEFKQYATTLRNKTNQYKKVKAELAELTAESVVLHRTEQLLKSKDADLEGFLRDLERQKGVSGFLATQDK--IDDVSVQNARVNALKG-----------ETLEEISRVVTDINQALKERKNQLAPQIKELRTVRQRYQEMEQVYLERKAQYDHTAVGLEAERLKLEQE 552          
BLAST of NO17G01070 vs. NCBI_GenBank
Match: XP_008914239.1 (hypothetical protein PPTG_18087 [Phytophthora parasitica INRA-310] >ETK73470.1 hypothetical protein L915_19602 [Phytophthora parasitica] >ETL26901.1 hypothetical protein L916_19492 [Phytophthora parasitica] >ETL80139.1 hypothetical protein L917_19339 [Phytophthora parasitica] >ETN00399.1 hypothetical protein PPTG_18087 [Phytophthora parasitica INRA-310] >ETP02957.1 hypothetical protein F441_20023 [Phytophthora parasitica CJ01A1] >ETP31127.1 hypothetical protein F442_19979 [Phytophthora parasitica P10297] >KUF97713.1 Intraflagellar Transport Protein 81 [Phytophthora nicotianae])

HSP 1 Score: 131.7 bits (330), Expect = 7.800e-27
Identity = 164/609 (26.93%), Postives = 279/609 (45.81%), Query Frame = 0
Query:   13 LQSIVTRLHEPPFSLSFPGGVHDLAAEPPN-ALLQLLYHILSYLEPC--MALDVKTASEDERVARTVDFLSMLKCPFLMPATDEEGEAMLVQGLLLGDKATLFPVLAWCLNNLSHLHRRAYLGRYLMPVDVPFDHSQTQDPTLADLHARFRGLQEEFTSVHKAFEEVRAAIGTTNSCEIRAQIKQLEEEKHQLEENVERMARVGQREVGFNEMLSLTRAVREEEEDERRLRGKLAEERHAFEISERRVQALGLALEEEGKRRRGRKGGRSRTPFDIQDQATAEMLVEELQEEVRRLRYQVTEQLPLEIEKAQLYFGRKEGIEGRHQHQNQQRQQLERVGRE---------DMEKVVYDVKRAELHVQYWKAKIDEKIIKSG-------GAINPSSNNGKRKAEEGRRERGKERGSDDKFLHLRE--RALVAAIAG---MEKE------GELEXXXXXXXXXXXXLDRLSVDRRVHEQAKERLESQITSREGY--PLYQGAGAKAAVAARAERGVEVVGVTRRSMKDAEGCXXXXXXXXXRGTQDELTEALRKINEELREEKRRLQPLVKVLKEGRKEAGILEEEHRLRKAQYERVMMMSRREGVKEDRE 590
            LQ IV  L++ PF L       D   E  N  LLQ+L+ +   ++P     +D++  +++ R  R ++FL +LK  F +P  D +G     + L  GD+ T++ +L W L +L    +RAYLGR+L P++VP ++    D +L  ++  ++ LQ +F +VHK  +++RA+   +   E+R +I QLEEE HQL E +  + +    + GF E+L+ T A+R+E+E++     KLAE         +R Q L L+L E  KR R  +         +   AT E L E LQ +V R    +T + P E                  + Q +  Q+LER   E         DME  V  ++RA   +Q ++ +I +  +  G             +N   RK  E   E  + R    + +   E   A +A+I+G   M +E        L             L  L+ +  V  + ++ L+S+    EG+   L +  G    +A + +  ++ V V    +   +G            T +E++  +  IN+ L+E K +L P +K L+  R+    +E+ +  RKAQY+   +    E +K ++E
Sbjct:    4 LQLIVENLNKEPFRLGLTLVAFD---EKSNFELLQILHEVFVEIDPTRHSGVDLRAEADEVRAQRYLEFLQLLK--FQLP-RDLDG---FREALAHGDRQTIYTLLHWALKSLPAHQKRAYLGRFLAPLNVPQEY--FGDGSLNAMYEHYQQLQNQFKTVHKEVDQLRAS--KSRPGELRREISQLEEESHQLTEKIANLKKKTTSDPGFQELLAATSALRKEQEEQ----AKLAE--------RKRDQLLSLSLAE--KRAREAEARLQDLRTSLSQDATPEQLFERLQAQVARNSEILTTKFPAEF-----------------RTQQETLQRLERALSEPPKTEHDIADMEDEVQALRRA---IQQYQTQIADAQVAQGSGEEDKLAVFRQHANLQARKLAEKEEELEQLRADKQRLVRSTEELEAKLASISGNKFMSREEFKQYATTLRNKTNQYKKVKAELAELTAESVVLHRTEQLLKSKDADLEGFLRDLERQKGVSGFLATQDK--IDDVSVQNARVNALKG-----------ETLEEISRVVTDINQALKERKNQLAPQIKELRTVRQRYQEMEQVYLERKAQYDHTAVGLEAERLKLEQE 552          
BLAST of NO17G01070 vs. NCBI_GenBank
Match: ETO61871.1 (hypothetical protein F444_20161 [Phytophthora parasitica P1976])

HSP 1 Score: 131.3 bits (329), Expect = 1.000e-26
Identity = 164/609 (26.93%), Postives = 279/609 (45.81%), Query Frame = 0
Query:   13 LQSIVTRLHEPPFSLSFPGGVHDLAAEPPN-ALLQLLYHILSYLEPC--MALDVKTASEDERVARTVDFLSMLKCPFLMPATDEEGEAMLVQGLLLGDKATLFPVLAWCLNNLSHLHRRAYLGRYLMPVDVPFDHSQTQDPTLADLHARFRGLQEEFTSVHKAFEEVRAAIGTTNSCEIRAQIKQLEEEKHQLEENVERMARVGQREVGFNEMLSLTRAVREEEEDERRLRGKLAEERHAFEISERRVQALGLALEEEGKRRRGRKGGRSRTPFDIQDQATAEMLVEELQEEVRRLRYQVTEQLPLEIEKAQLYFGRKEGIEGRHQHQNQQRQQLERVGRE---------DMEKVVYDVKRAELHVQYWKAKIDEKIIKSG-------GAINPSSNNGKRKAEEGRRERGKERGSDDKFLHLRE--RALVAAIAG---MEKE------GELEXXXXXXXXXXXXLDRLSVDRRVHEQAKERLESQITSREGY--PLYQGAGAKAAVAARAERGVEVVGVTRRSMKDAEGCXXXXXXXXXRGTQDELTEALRKINEELREEKRRLQPLVKVLKEGRKEAGILEEEHRLRKAQYERVMMMSRREGVKEDRE 590
            LQ IV  L++ PF L       D   E  N  LLQ+L+ +   ++P     +D++  +++ R  R ++FL +LK  F +P  D +G     + L  GD+ T++ +L W L +L    +RAYLGR+L P++VP ++    D +L  ++  ++ LQ +F +VHK  +++RA+   +   E+R +I QLEEE HQL E +  + +    + GF E+L+ T A+R+E+E++     KLAE         +R Q L L+L E  KR R  +         +   AT E L E LQ +V R    +T + P E                  + Q +  Q+LER   E         DME  V  ++RA   +Q ++ +I +  +  G             +N   RK  E   E  + R    + +   E   A +A+I+G   M +E        L             L  L+ +  V  + ++ L+S+    EG+   L +  G    +A + +  ++ V V    +   +G            T +E++  +  IN+ L+E K +L P +K L+  R+    +E+ +  RKAQY+   +    E +K ++E
Sbjct:    4 LQLIVENLNKGPFRLGLTLVAFD---EKSNFELLQILHEVFVEIDPTRHSGVDLRAEADEVRAQRYLEFLQLLK--FQLP-RDLDG---FREALAHGDRQTIYTLLHWALKSLPAHQKRAYLGRFLAPLNVPQEY--FGDGSLNAMYEHYQQLQNQFKTVHKEVDQLRAS--KSRPGELRREISQLEEESHQLTEKIANLKKKTTSDPGFQELLAATSALRKEQEEQ----AKLAE--------RKRDQLLSLSLAE--KRAREAEARLQDLRTSLSQDATPEQLFERLQAQVARNSEILTTKFPAEF-----------------RTQQETLQRLERALSEPPKTEHDIADMEDEVQALRRA---IQQYQTQIADAQVAQGSGEEDKLAVFRQHANLQARKLAEKEEELEQLRADKQRLVRSTEELEAKLASISGNKFMSREEFKQYATTLRNKTNQYKKVKAELAELTAESVVLHRTEQLLKSKDADLEGFLRDLERQKGVSGFLATQDK--IDDVSVQNARVNALKG-----------ETLEEISRVVTDINQALKERKNQLAPQIKELRTVRQRYQEMEQVYLERKAQYDHTAVGLEAERLKLEQE 552          
BLAST of NO17G01070 vs. NCBI_GenBank
Match: XP_009090702.1 (PREDICTED: intraflagellar transport protein 81 homolog [Serinus canaria])

HSP 1 Score: 129.4 bits (324), Expect = 3.900e-26
Identity = 98/317 (30.91%), Postives = 166/317 (52.37%), Query Frame = 0
Query:   13 LQSIVTRLHEPPFSLSFPGGVHDLAAEPPNALLQLLYHILSYLEPCMALDVKTASEDERVARTVDFLSMLKCPFLMPATDEEGEAMLVQGLLLGDKATLFPVLAWCLNNLSHLHRRAYLGRYLMPVDVPFDHSQTQDPTLADLHARFRGLQEEFTSVHKAFEEVRAAIGTTNSCEIRAQIKQLEEEKHQLEENVERMARVGQREVGFNEMLSLTRAVREEEEDERRLRGKLAEERHAFEISERRVQALGLALEEEGKRRRGRKGGRSRTPFDIQDQATAEMLVEELQEEVRRLRYQVTEQLPLEIE--KAQLYFGRK 328
            +Q IV +L++ PF  ++   +    +  P  LLQLL  +L  ++P  A+D++    ++   R ++ L +LK  +  P T  +  A   QGL+ G KA + PVL W L   + L  RAYL R+L+ ++VP +    QD T+AD + ++  L E F ++HK  E+++  I   ++ EIR  I  +EEEK QL + VER+ +  +       ML + R +R E+E E  L  +  E++     SE+R+Q   + L+E                 ++   +  E L+++L+EE+    Y V E++P E+E  K  +YF +K
Sbjct:    5 MQFIVEKLNQEPFRKNY--NLISFDSLEPLQLLQLLSDVLGEIDPKHAVDIREELPEQTAKRMLNLLGILK--YKPPGTVSDLSAFR-QGLVTGSKAVIHPVLHWLLQRTNELRTRAYLARFLVKLEVPAEF--LQDDTVADFNKQYEELMEAFKNLHKEHEQLK--ISGLSTAEIRRDISAMEEEKDQLAKRVERLKKRVETVQNHQRMLEIARQLRLEKEREESLAQQKQEQKSQLFHSEQRLQRAQVQLKEMQ---------------NMVADSKPESLMKKLEEEINFNSYLVNEKIPREMESKKTSVYFLQK 297          
BLAST of NO17G01070 vs. NCBI_GenBank
Match: XP_009532455.1 (hypothetical protein PHYSODRAFT_317373 [Phytophthora sojae] >EGZ12122.1 hypothetical protein PHYSODRAFT_317373 [Phytophthora sojae])

HSP 1 Score: 127.9 bits (320), Expect = 1.100e-25
Identity = 161/601 (26.79%), Postives = 278/601 (46.26%), Query Frame = 0
Query:   13 LQSIVTRLHEPPFSLSFPGGVHDLAAEPPN-ALLQLLYHILSYLEPC--MALDVKTASEDERVARTVDFLSMLKCPFLMPATDEEGEAMLVQGLLLGDKATLFPVLAWCLNNLSHLHRRAYLGRYLMPVDVPFDHSQTQDPTLADLHARFRGLQEEFTSVHKAFEEVRAAIGTTNSCEIRAQIKQLEEEKHQLEENVERMARVGQREVGFNEMLSLTRAVREEEEDERRLRGKLAEERHAFEISERRVQALGLALEEEGKRRRGRKGGRSRTPFDIQDQATAEMLVEELQEEVRRLRYQVTEQLPLEIEKAQLYFGRKEGIEGRHQHQNQQRQQLERVGREDMEKVVYDVKRAELHVQYWKAKIDEKIIKSG--------GAINPSSNNGKRKAEEGRRERGKERGSDDKFLHLRE--RALVAAIAG---MEKE------GELEXXXXXXXXXXXXLDRLSVDRRVHEQAKERLESQITSREGY--PLYQGAGAKAAVAARAERGVEVVGVTRRSMKDAEGCXXXXXXXXXRGTQDELTEALRKINEELREEKRRLQPLVKVLKEGRKEAGILEEEHRLRKAQYERVMMMSRREGVKEDRE 590
            LQ IV +L++ PF L       D   E  N  LLQ+L+ +   ++P     +D++  +++ R  R ++FL +LK  F +P  D +G     + L  GD+ T++ +L W L +L    +RAYLGR+L P++VP ++    D +L  ++  ++ LQ +F +VHK  +++RA+   +   E+R +I QLEEE  QL E +  + +    + GF E+L+ T A+R+E+E++     KLAE         +R Q L L+L E  KR R  +         +   AT E L E LQ +V R    +  + P E       F  ++    R +H   +  + E     DME  V  ++RA   +Q ++A+I +  +  G              +N   RK  E   E  + R    +     E   A +A+I+G   M +E        L             L  L+ +  V  + ++ L+S+    EG+   L +  G    +A + +  ++ V V    +   +G            T +E++  +  IN+ L+E K +L P +K L+  R+    +E+ +  RKAQY+   +    E +K ++E
Sbjct:    4 LQLIVEQLNKEPFRLGLTLVAFD---EKSNFELLQILHEVFVEIDPTRHSGVDLRAEADEVRAQRYLEFLQLLK--FQLP-RDIDG---FREALAHGDRQTIYTLLHWALKSLPAHQKRAYLGRFLAPLNVPQEY--FGDGSLNAMYEHYQQLQNQFKTVHKEVDQLRAS--KSRPGELRREISQLEEESQQLTEKIANLKKKTSSDPGFQELLAATSALRKEQEEQ----AKLAE--------RKRDQLLSLSLAE--KRARETEARLQDLRASLSQDATPEQLFERLQSQVARNNDIINAKFPAE-------FNTQQATLQRLEHALSEPPKTEH-DIADMEDEVQALRRA---IQQYQAQIADAQVAQGSGDGEDKLAVFRQHANLQARKLTEKEDELEQLRADKQRLQRSTEELEAKLASISGSKFMSREEFKQYATTLRNKTNQYKKVKAELAELTAESVVLHRTEQLLKSKDADLEGFLRDLERQKGVSGFLATQDK--IDDVSVQNARVNALKG-----------ETLEEISRVVTDINQALKERKNQLAPQIKELRTVRQRYQEMEQVYLERKAQYDHTAVGLEAERLKLEQE 553          
BLAST of NO17G01070 vs. NCBI_GenBank
Match: XP_008940788.1 (PREDICTED: intraflagellar transport protein 81 homolog [Merops nubicus] >KFQ16922.1 Intraflagellar transport protein 81 [Merops nubicus])

HSP 1 Score: 127.9 bits (320), Expect = 1.100e-25
Identity = 99/317 (31.23%), Postives = 167/317 (52.68%), Query Frame = 0
Query:   13 LQSIVTRLHEPPFSLSFPGGVHDLAAEPPNALLQLLYHILSYLEPCMALDVKTASEDERVARTVDFLSMLKCPFLMPATDEEGEAMLVQGLLLGDKATLFPVLAWCLNNLSHLHRRAYLGRYLMPVDVPFDHSQTQDPTLADLHARFRGLQEEFTSVHKAFEEVRAAIGTTNSCEIRAQIKQLEEEKHQLEENVERMARVGQREVGFNEMLSLTRAVREEEEDERRLRGKLAEERHAFEISERRVQALGLALEEEGKRRRGRKGGRSRTPFDIQDQATAEMLVEELQEEVRRLRYQVTEQLPLEIE--KAQLYFGRK 328
            +Q+IV +L++ PF  ++   +    +     LLQLL  +L  ++P  A+D++    ++   R +  L +LK  +  P T  +  A   QGL+ G K  + P+L W L   + L +RAYL R+L+ ++VP +    QD T+AD++ ++  L E F ++HK  E++R  I   ++ EIR  I  +EEEK QL + VER+ +  +       ML + R +R E+E E  L  +  E+++    +E+R+Q   L L+E             R   D    +  E L+++L+EE+    Y VT++LP E+E  K   YF +K
Sbjct:    5 IQAIVEKLNQEPFRKNY--NLITFDSLESTQLLQLLSDVLGEIDPKHAVDIREELPEQTAKRMLGLLGILK--YKPPGTVSDLSAFR-QGLVTGSKPVIHPLLHWLLQRTNELKKRAYLARFLVKLEVPAEF--LQDETVADINKQYEELMEAFKNLHKECEQLR--ISGLSTAEIRRDITAMEEEKDQLIKRVERLKKRVETVQNHQRMLEIARQLRLEKEREESLAQQKQEQKNQLFHAEQRLQRAQLQLKE-----------MHRAVVD----SKPESLMKKLEEEINFNSYLVTDKLPRELESKKNSAYFLQK 297          
BLAST of NO17G01070 vs. NCBI_GenBank
Match: KFW83270.1 (Intraflagellar transport protein 81 [Manacus vitellinus])

HSP 1 Score: 127.1 bits (318), Expect = 1.900e-25
Identity = 95/317 (29.97%), Postives = 164/317 (51.74%), Query Frame = 0
Query:   13 LQSIVTRLHEPPFSLSFPGGVHDLAAEPPNALLQLLYHILSYLEPCMALDVKTASEDERVARTVDFLSMLKCPFLMPATDEEGEAMLVQGLLLGDKATLFPVLAWCLNNLSHLHRRAYLGRYLMPVDVPFDHSQTQDPTLADLHARFRGLQEEFTSVHKAFEEVRAAIGTTNSCEIRAQIKQLEEEKHQLEENVERMARVGQREVGFNEMLSLTRAVREEEEDERRLRGKLAEERHAFEISERRVQALGLALEEEGKRRRGRKGGRSRTPFDIQDQATAEMLVEELQEEVRRLRYQVTEQLPLEIE--KAQLYFGRK 328
            +Q IV +L++ PF  ++   +    +     LLQLL  +L  ++P  A+D++    ++   R +  L +LK     P  +    +   QGL+ G K  + P+L W L   + L +RAYL R+L+ ++VP +    QD T+AD++ ++  L E F ++HK +E+++  I   ++ EIR  I  +EEEK QL + VER+ +  +       ML + R +R E+E E  L  +  E++     +E+R+Q   L L+E                 D    +  E L+++L+EE+    Y VTE++P E+E  KA +Y  +K
Sbjct:    5 MQFIVEKLNQEPFRKNY--NLISFDSLESVQLLQLLNDVLGEIDPKHAVDIREELPEQTAKRMLSLLGILK---YKPPGNVSDLSAFRQGLVTGSKPVIHPLLHWLLQRTNELKKRAYLARFLVKLEVPAEF--LQDDTVADINKQYEELMEAFKNLHKEYEQLK--ISGLSTAEIRRDISAMEEEKDQLVKRVERLKKRVETVQNHQRMLEIARQLRLEKEREESLAQQKQEQKSQLFHAEQRLQRAQLQLKEMQ---------------DAVADSKPESLMKKLEEEINFNSYLVTEKMPRELESKKASVYLLQK 297          
BLAST of NO17G01070 vs. NCBI_GenBank
Match: XP_017931954.1 (PREDICTED: intraflagellar transport protein 81 homolog [Manacus vitellinus])

HSP 1 Score: 127.1 bits (318), Expect = 1.900e-25
Identity = 95/317 (29.97%), Postives = 164/317 (51.74%), Query Frame = 0
Query:   13 LQSIVTRLHEPPFSLSFPGGVHDLAAEPPNALLQLLYHILSYLEPCMALDVKTASEDERVARTVDFLSMLKCPFLMPATDEEGEAMLVQGLLLGDKATLFPVLAWCLNNLSHLHRRAYLGRYLMPVDVPFDHSQTQDPTLADLHARFRGLQEEFTSVHKAFEEVRAAIGTTNSCEIRAQIKQLEEEKHQLEENVERMARVGQREVGFNEMLSLTRAVREEEEDERRLRGKLAEERHAFEISERRVQALGLALEEEGKRRRGRKGGRSRTPFDIQDQATAEMLVEELQEEVRRLRYQVTEQLPLEIE--KAQLYFGRK 328
            +Q IV +L++ PF  ++   +    +     LLQLL  +L  ++P  A+D++    ++   R +  L +LK     P  +    +   QGL+ G K  + P+L W L   + L +RAYL R+L+ ++VP +    QD T+AD++ ++  L E F ++HK +E+++  I   ++ EIR  I  +EEEK QL + VER+ +  +       ML + R +R E+E E  L  +  E++     +E+R+Q   L L+E                 D    +  E L+++L+EE+    Y VTE++P E+E  KA +Y  +K
Sbjct:    5 MQFIVEKLNQEPFRKNY--NLISFDSLESVQLLQLLNDVLGEIDPKHAVDIREELPEQTAKRMLSLLGILK---YKPPGNVSDLSAFRQGLVTGSKPVIHPLLHWLLQRTNELKKRAYLARFLVKLEVPAEF--LQDDTVADINKQYEELMEAFKNLHKEYEQLK--ISGLSTAEIRRDISAMEEEKDQLVKRVERLKKRVETVQNHQRMLEIARQLRLEKEREESLAQQKQEQKSQLFHAEQRLQRAQLQLKEMQ---------------DAVADSKPESLMKKLEEEINFNSYLVTEKMPRELESKKASVYLLQK 297          
The following BLAST results are available for this feature:
BLAST of NO17G01070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ33391.14.400e-3035.83conserved unknown protein [Ectocarpus siliculosus][more]
XP_002998291.15.400e-2826.60Intraflagellar Transport Protein 81 [Phytophthora ... [more]
ETI33142.15.900e-2726.93hypothetical protein F443_20151 [Phytophthora para... [more]
XP_008914239.17.800e-2726.93hypothetical protein PPTG_18087 [Phytophthora para... [more]
ETO61871.11.000e-2626.93hypothetical protein F444_20161 [Phytophthora para... [more]
XP_009090702.13.900e-2630.91PREDICTED: intraflagellar transport protein 81 hom... [more]
XP_009532455.11.100e-2526.79hypothetical protein PHYSODRAFT_317373 [Phytophtho... [more]
XP_008940788.11.100e-2531.23PREDICTED: intraflagellar transport protein 81 hom... [more]
KFW83270.11.900e-2529.97Intraflagellar transport protein 81 [Manacus vitel... [more]
XP_017931954.11.900e-2529.97PREDICTED: intraflagellar transport protein 81 hom... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL158nonsL158Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR036ncniR036Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR084ngnoR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004819NSK004819Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G01070.1NO17G01070.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|168659gene_7785Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G01070.1NO17G01070.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G01070 ID=NO17G01070|Name=NO17G01070|organism=Nannochloropsis oceanica|type=gene|length=1968bp
ACCACAGGCAAACGTAGCCATGCCAGATCCTGGCCAAGACAAAGGCTTAA
CGCTACTACAATCAATCGTCACCCGGCTGCACGAACCTCCCTTCTCCCTG
TCGTTCCCCGGAGGAGTCCATGACCTCGCCGCCGAGCCTCCCAACGCCCT
CCTGCAGCTCCTGTACCACATCCTCTCGTATCTCGAGCCTTGCATGGCCC
TAGATGTCAAGACCGCGTCGGAAGACGAGCGTGTGGCACGCACGGTAGAT
TTTCTTAGCATGCTCAAGTGTCCTTTCTTAATGCCTGCCACGGATGAAGA
GGGGGAAGCAATGCTGGTCCAGGGCCTGCTACTAGGTGATAAGGCTACCC
TTTTTCCTGTTCTGGCATGGTGCCTCAATAATCTCTCCCATCTCCACCGA
CGGGCGTACCTGGGGAGATACCTCATGCCCGTGGATGTCCCATTCGACCA
CTCACAAACACAAGACCCTACTCTTGCTGACTTGCACGCCAGGTTTCGCG
GGCTCCAAGAGGAATTTACTTCCGTGCACAAAGCGTTCGAAGAGGTACGA
GCAGCCATAGGAACCACCAACTCATGCGAGATCCGCGCACAAATTAAGCA
GCTTGAGGAGGAGAAACATCAGTTGGAGGAGAACGTTGAACGGATGGCCA
GGGTGGGTCAGAGAGAGGTAGGGTTTAACGAGATGCTTTCTTTGACAAGA
GCAGTGAGGGAGGAAGAGGAGGATGAACGACGGTTGAGGGGTAAGTTGGC
CGAGGAAAGGCATGCGTTCGAGATAAGTGAGCGACGGGTGCAGGCGCTGG
GATTAGCGTTGGAGGAAGAGGGGAAGAGGAGAAGAGGGAGGAAGGGAGGG
AGATCACGGACCCCGTTTGACATTCAAGATCAAGCAACAGCTGAGATGTT
GGTGGAGGAGCTTCAGGAAGAGGTGAGACGTTTGCGGTACCAAGTGACGG
AGCAACTCCCTTTGGAGATAGAGAAAGCCCAGCTTTATTTTGGAAGGAAG
GAAGGGATAGAAGGGAGGCATCAGCACCAGAACCAGCAGCGGCAGCAGCT
CGAGAGGGTGGGGAGGGAGGACATGGAGAAGGTTGTTTACGATGTGAAGC
GGGCAGAGCTTCATGTGCAATATTGGAAGGCCAAAATAGACGAGAAGATT
ATAAAGAGTGGTGGTGCGATCAATCCGAGCAGCAACAATGGAAAGAGAAA
AGCTGAAGAAGGAAGGAGGGAGAGAGGAAAGGAGAGGGGTAGCGATGACA
AATTTTTGCACTTGAGGGAACGTGCGCTGGTGGCTGCGATTGCGGGGATG
GAAAAGGAGGGGGAGTTAGAGATGCTGTTGCTTAGGCAGCAGCAGCAGCA
GCAGCAGCTAGACCGGTTGTCTGTGGATAGACGTGTGCATGAGCAAGCAA
AGGAGAGACTAGAATCTCAAATAACGAGTAGAGAAGGGTATCCTTTGTAC
CAGGGGGCAGGAGCGAAAGCGGCAGTGGCGGCAAGAGCTGAACGAGGAGT
TGAAGTAGTAGGGGTGACAAGAAGAAGCATGAAAGACGCAGAGGGTTGTG
GTGCTGACGGTGATGGTGATGGTGATAGAGGGACACAGGATGAGTTAACC
GAGGCATTGCGGAAAATTAATGAAGAACTCAGAGAAGAAAAACGTCGCCT
ACAACCACTGGTCAAGGTACTGAAGGAGGGACGGAAGGAGGCAGGGATCT
TAGAGGAAGAGCATCGCTTGCGTAAAGCTCAGTATGAGAGGGTGATGATG
ATGTCAAGAAGGGAGGGAGTAAAGGAAGACAGGGAGGGAGAGAGGGAAAT
GCTAGCGCTTAAGACGTTGCTGGAGGTGAAGTTGAGCGTGGAGGGAGACG
GACGGGGAAGGGCAGCGCGGCAACAACCGCAACAACAGTATTAGCATCAG
GAAAGCGATGCATGGTGTCCATTGCATCGCTAACGGTGATGGCAACCAAA
ACCAAGGAACGTAAATAG
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protein sequence of NO17G01070.1

>NO17G01070.1-protein ID=NO17G01070.1-protein|Name=NO17G01070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=625bp
MPDPGQDKGLTLLQSIVTRLHEPPFSLSFPGGVHDLAAEPPNALLQLLYH
ILSYLEPCMALDVKTASEDERVARTVDFLSMLKCPFLMPATDEEGEAMLV
QGLLLGDKATLFPVLAWCLNNLSHLHRRAYLGRYLMPVDVPFDHSQTQDP
TLADLHARFRGLQEEFTSVHKAFEEVRAAIGTTNSCEIRAQIKQLEEEKH
QLEENVERMARVGQREVGFNEMLSLTRAVREEEEDERRLRGKLAEERHAF
EISERRVQALGLALEEEGKRRRGRKGGRSRTPFDIQDQATAEMLVEELQE
EVRRLRYQVTEQLPLEIEKAQLYFGRKEGIEGRHQHQNQQRQQLERVGRE
DMEKVVYDVKRAELHVQYWKAKIDEKIIKSGGAINPSSNNGKRKAEEGRR
ERGKERGSDDKFLHLRERALVAAIAGMEKEGELEMLLLRQQQQQQQLDRL
SVDRRVHEQAKERLESQITSREGYPLYQGAGAKAAVAARAERGVEVVGVT
RRSMKDAEGCGADGDGDGDRGTQDELTEALRKINEELREEKRRLQPLVKV
LKEGRKEAGILEEEHRLRKAQYERVMMMSRREGVKEDREGEREMLALKTL
LEVKLSVEGDGRGRAARQQPQQQY*
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Synonyms
Publications