NO17G01000, NO17G01000 (gene) Nannochloropsis oceanica

Overview
NameNO17G01000
Unique NameNO17G01000
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2734
Alignment locationchr17:319369..322102 +

Link to JBrowse

Properties
Property NameValue
DescriptionCellulase 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:319369..322102 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR001547Glyco_hydro_5
Homology
BLAST of NO17G01000 vs. NCBI_GenBank
Match: EWM21124.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 765.8 bits (1976), Expect = 9.800e-218
Identity = 382/620 (61.61%), Postives = 444/620 (71.61%), Query Frame = 0
Query:   14 VLLVVATTTCCLFTVNAQLEPQYIPASTADSVTCYPADSLAWRSVPGKMVVHGAPFVKKPTAPVPPAPPMREPGRPLPVD--------VGVGPAGGFETAPRPPMRLPQQQQQQPFMRP--------------------------PAGNTRPGPNMNPVVSQQRAIPAVRFLQEGQE-----HQKVAGAVVDGVGIETPDWMG-QGDELTEEDKAAIARESMYANIQIKGLNW---------------TIDEVIAFLIDHKINAIRLPFSLEFALTPMDVQEAKAGGGFGELQYPDRGKISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSRLWYDPEKYSEATVMWGW--------GHWNLFGLDVMNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFLNGDGRDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDVSNMLYFNDFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSCKNKDGVVQEHLAEWMVENCFQSNFWWALNPGSSDTDGLMSPDWSHFDPFKMNLLGKVQPDPSTFTFDKASNQVCIRHGAPPNPQCASNIDAVASRQPSQVGYDN 571
            +L + A   C + ++ AQLEPQY+PA++++SVTCYPAD+LAWRS+PGK+V+HGAPFVK     VPPA    +P  P+  D          + P  G    P+P      +  Q P                              P G  RP PNM+P    +   PAVR LQ  +       QKVAGAVV GV IE       + D+L EEDKAAIARESMYA+IQ+KGLNW               TID+V+AF + H INA+RLPFSL FALTPMD +EA+AGGG GELQYPDRGKISP Y G+TSWEIID+LF+ A ENGILILLDMH LDP KGVSRLWYDP KYSEATV+WGW         HWNLFGLD+MNECHDHASWG G+PMTDFN YVERF+LF++ERVP YRGLFFVEG+FLN  GRD  P+PYWWGGNL GADK+PID KIAALNDR+VYAPHIYGPDVSNM YFND+ FPNNL+NVWD QFGWLIKSTRKALVVGEWGGSC NKDG+VQEHLA+WM++NCFQSNFWWALNPGS+DTDGLMS DWSHFD  KM LLGKVQP+PS FT++KA++ VC+RHGAPPNPQCA ++  +     +Q   DN
Sbjct:   12 ILCINAAIACLVTSIYAQLEPQYVPAASSESVTCYPADALAWRSIPGKIVLHGAPFVKTHHKKVPPA----QPSEPIVTDXXXXXXXXXXIRPXXGVTPEPQPKPINGVKPPQPPVTXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGGAGRPLPNMDPFRPPELK-PAVRHLQTQEAAKAGGDQKVAGAVVGGVAIENGSGTAREEDDLDEEDKAAIARESMYASIQLKGLNWFGLDRINIFEGTNYKTIDQVMAFFVAHNINALRLPFSLAFALTPMDHEEAEAGGGQGELQYPDRGKISPEYIGLTSWEIIDLLFEKAKENGILILLDMHTLDPDKGVSRLWYDPAKYSEATVLWGWERILSRYVHHWNLFGLDIMNECHDHASWGKGDPMTDFNRYVERFILFVHERVPSYRGLFFVEGIFLNAMGRDQSPWPYWWGGNLFGADKYPIDVKIAALNDRIVYAPHIYGPDVSNMFYFNDWSFPNNLKNVWDNQFGWLIKSTRKALVVGEWGGSCNNKDGIVQEHLAQWMIDNCFQSNFWWALNPGSADTDGLMSQDWSHFDERKMALLGKVQPNPSKFTYEKATDMVCVRHGAPPNPQCADDLAHILKTPDTQQDQDN 626          
BLAST of NO17G01000 vs. NCBI_GenBank
Match: EWM26661.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 312.0 bits (798), Expect = 3.900e-81
Identity = 145/360 (40.28%), Postives = 213/360 (59.17%), Query Frame = 0
Query:  203 GLNW-TIDEVIAFLIDHKINAIRLPFSLEFALTPMDVQEAKAGGGFGELQYPDRGKISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSRLWYDPEKYSEATVMWGWGH--------WNLFGLDVMNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFLNGDGRDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDVSNMLYFN--DFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSCKNKDGVVQEHLAEWMVENCFQSNFWWALNPGSSDTDGLMSPDWSHFDPFKMNLLGKVQPDPSTFTFDKASNQVCIRHGAPPNPQC 552
            GLN+ T+D ++ F + HK N +R+P S+ F L P D +             P++  +     G T WEI+D +   A   G++++LDMH L P +    LWYD E+Y EA ++  W +        WN+F LD+ NE H  A+WG   P TD+N + ER +  I+ + P ++GL+ VEGV  N +      YP+WWGGN  GA +HPI   +  + +RVVY+PH+YGPDV +  Y N       N L  VWD Q GWLI   +K +++GEWGGS K +D +VQ  LA+W+V+NC  +N WWA+NP SSDT G+M+ +W  +D  +++L+  + PDP+ F      +++C+R G  PNPQC
Sbjct:  111 GLNFTTVDTILNFFLQHKFNTVRIPVSVAFGLAPKDFK-------------PNQRFVGKGLKGKTIWEILDEVIDQAALRGLMVMLDMHTLGPQEATD-LWYD-EQYKEADILQAWSNIMAAYSIKWNVFALDLKNEPHGIATWGVSAPQTDYNKFYERAIAHIHTQFPNWKGLYMVEGVQYNKETDKVTDYPFWWGGNFGGAIQHPIYVPVPEVMNRVVYSPHVYGPDVYDHPYMNVPAAELANELVKVWDSQMGWLIPKLQKGMIIGEWGGSLKGRDEIVQTELAKWLVKNCMANNVWWAINPESSDTGGIMAWNWKTYDKRRLDLVDSIFPDPTQFGI--KHSKLCLRFGTYPNPQC 453          
BLAST of NO17G01000 vs. NCBI_GenBank
Match: EWM23139.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 286.2 bits (731), Expect = 2.300e-73
Identity = 158/410 (38.54%), Postives = 224/410 (54.63%), Query Frame = 0
Query:  174 DW---MGQGDELTEEDKAAIARESMYANIQIKGLN----------------WTIDEVIAFLIDHKINAIRLPFSLEFALTPMDVQEAKAGGGFGELQYPDRGKISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSRLWYDPEKYSEATVMWGW--------GHWNLFGLDVMNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFLNGDGRDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDV-SNMLYFNDFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSC--KNKDGVVQEHLAEWMVENCFQSNFWWALNPGSSDTDGLMSPDWSHFDPFKMNLLGKVQPDPSTFTFD-KASNQVCIRHGAPPNPQCA 553
            DW   +GQ  + T E+ + +   +    + +KGLN                W+ +  ++FL  H+ NA+RLPFSLE+    +D   A                +     G+T  +++D +F  A   GILILLD+H++   KG++ LWYD E    A V+  W        G WNL G+D+ NE H  ASWG G+P TD+N++  + +  +  RVP++ G+FFVEG+      R   P+ YWWGGNL G  K+PI T    L+ RVVY+PHIYGP+V     YF D RFP+N+  +WD QFGW+ KST +A+V+GEWGGS     K    Q+ LAEW+V  C   NFWW LNP +    GL++ D+   D   + +L  VQP P+TF     A + +C+  GA  N +CA
Sbjct:  166 DWCLGVGQEPKYTSENGSVMLNGN---PLYLKGLNWYGFEGELFVLDGLAVWSPERFMSFLASHRFNALRLPFSLEWLARGLDSPLANI------------YVVQEDMRGLTQGQVMDRIFDAAAAQGILILLDLHVISVEKGITDLWYD-ETADGALVLDLWTLLLRRFAGRWNLLGIDLKNEPHGIASWGHGHPKTDWNAFATKSIQTLATRVPDFHGVFFVEGI---ERPRWNSPHAYWWGGNLEGVRKYPISTGSEDLDRRVVYSPHIYGPEVFPRHRYFQDSRFPDNMPGIWDHQFGWIEKSTGRAVVLGEWGGSIVGDRKAAANQQKLAEWLVHACIPDNFWWCLNPATEFNGGLLARDYQAVDKNVLQMLHYVQPKPTTFHGGIGAGDPLCVVDGAFANVRCA 556          
BLAST of NO17G01000 vs. NCBI_GenBank
Match: EWM20925.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 275.0 bits (702), Expect = 5.300e-70
Identity = 137/336 (40.77%), Postives = 190/336 (56.55%), Query Frame = 0
Query:  203 GLNWTIDEVIAFLIDHKINAIRLPFSLEFALTPMDVQEAKAGGGFGELQYPDRG--KISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSRLWYDPEKYSEATVMWGWG--------HWNLFGLDVMNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFLNGDGRDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDVSNMLYFNDFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSCKNKDGVVQEHLAEWMVENCFQSNFWWALNPGSSDTDGLMSPDWSHFDPFKMNLLGKVQPDPS 529
            GL+ T+ + +  L  H  NAIRLPFS++ AL               +  YP+ G  +   +   +TS +I+D L + AG+ G++++LD H LDP +G+S LWYD E Y E  ++  W         HWN+F LD+ NE H   SWG+G  +TD+ +  ER +  I    P++RGLFFV G++  G         +WWGGN     +HP+D     LN RVVY PH+YGPDV    YF+ + FP+NL  VWDL +G+L      A+VV EWGG C+ KD   QE +A ++ E     NF+W LNP S DT G++  DWS     K+ LL  VQP+PS
Sbjct:   55 GLSKTLTDYLDLLAFHGFNAIRLPFSVKLALAL-------------DTTYPEPGFVQADASLSSLTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDRGISDLWYD-EGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGIWGGGG--------HWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQSYFSSWSFPDNLPAVWDLHWGFLSGVLETAVVVSEWGGFCRGKDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPS 368          
BLAST of NO17G01000 vs. NCBI_GenBank
Match: EWM26490.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 262.7 bits (670), Expect = 2.700e-66
Identity = 153/433 (35.33%), Postives = 225/433 (51.96%), Query Frame = 0
Query:  135 MNPVVSQQRAIPAVRFLQEGQEHQKVAGAVVDGVGIETPDWMGQGDELTEEDKAAIARESMYANIQI-----KGLNWTI--DEVIAFLIDHKINAIRLPFSLEFALTPMDVQEAKAGGGFGELQYPDRGKISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSRLWYDPEKYSEATVMWGWGH--------WNLFGLDVMNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFL-NGDGRDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDVSNMLYFNDFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSCKNKDGVVQEHLAEWMVENCFQSNFWWALNPGSSDTDGLMSPDWSHFDPFKMNLLGKVQPDPSTFTFDKASNQVCIRHGAPPNPQC 552
            M  +V+    + A R L +     KV+      + + + DW  +G E+    +    +   Y   +       GL W++  D++  FL +   NA+RLPFS   AL P     A                I    + +T+ E+I  +   A E GILI+LDMH L+    +  LWYD +KYS   V   W +        WNLF +D+ NE H  A+WG+G   TD+N+  E    ++ ++ P+Y+GL FVEG  L +           WWGG+L G  + PID    ALN R+VY+PH+YGPD     YF    FP+N+ ++W  Q+ ++ + T +A+VVGEWGG  +N+D + Q+  A+++V+ C +  F+W LNP S DT GL+  D+    P K+ LL KVQP P TF   K S+Q CI  GA  NP+C
Sbjct:   33 MGGLVNMNPRLRATRQLAKASGSSKVSTPA--DLCVASLDWTSEGGEILLNGQPFHLKGVSYFGFETPNEVPHGL-WSVTRDQIFGFLRNESFNAVRLPFSTALALEPNKKVNANT--------------IEKELHDLTALELIGNIIDKAAEYGILIMLDMHRLN-EDFIPELWYD-DKYSMDDVKEAWDNLLTAFGDRWNLFAIDLKNEPHGVATWGSGKATTDWNTAAEELATYLYKKHPQYKGLVFVEGTQLASAKHHKLDKNNKWWGGDLEGVQEFPIDLGSDALNKRLVYSPHVYGPDAFVQPYFEAKNFPDNMPDIWKKQWAFVEEQTDRAVVVGEWGGRYENQDKIWQDSFAKFLVDECLEDTFYWCLNPNSGDTGGLLDYDFLTPMPKKLALLAKVQPHP-TFITVKGSDQYCISPGAYANPKC 445          
BLAST of NO17G01000 vs. NCBI_GenBank
Match: PDM84795.1 (hypothetical protein PRIPAC_33818 [Pristionchus pacificus])

HSP 1 Score: 235.0 bits (598), Expect = 6.000e-58
Identity = 129/365 (35.34%), Postives = 184/365 (50.41%), Query Frame = 0
Query:  204 LNWTIDEVIAFLIDHKINAIRLPFSLEFALTPMDVQEAKAGGGFGELQYPDRGKISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSRLWYDPE---------------KYSEATVMWGWGHWNLFGLDVMNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFLNGDGRDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDVSNMLYFNDFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSCK--NKDGVVQEHLAEWMVENCFQSNFWWALNPGSSDTDGLMSPDWSHFDPFKMNLLGKVQPDPSTFTFDKASNQVCIRHGAPPNPQC 552
            LN+ +D    F+ ++  NAIR+PFSLE             G              +P   G T+ +++D     A E G+LI+LD H + P  G+S LWY+ E               +YS+  V   W  WN+F +D+ NE HD ASWG  N  TD+N   ER    I   +  + GLFFVEG+               WG  L    + PI+T  A+LN+RV+Y+PH YGP V +   FN   FPNNL  ++  ++G+++  T   +VVGEWGG  +  ++D    +   EW+   C  +NF+W LNP S+DT GL+  DW    P K+NL  + QP+P+   F   + Q+CI  GA P   C
Sbjct:   48 LNFYLD----FIKNNNFNAIRVPFSLEMVKNNPSNLNINCGS-------------NPGLCGKTALQLLDAFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQVISLWQSLITRYSDRQVQLKW-IWNVFAIDLKNEPHDSASWGNSNAATDWNKAAER----IINSLSSFPGLFFVEGI--------------EWGNRLENVAQFPINTGNASLNNRVIYSPHCYGPSVYDRPEFNTQDFPNNLDGIYMAKYGFIVNQTGHPVVVGEWGGRAEVGSRDMAWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPTPRKINLTNRAQPNPT--KFQPQNGQICITAGAFPEAHC 374          
BLAST of NO17G01000 vs. NCBI_GenBank
Match: ADV58314.1 (cellulase 2, partial [Pristionchus pacificus] >ADV58323.1 cellulase 2, partial [Pristionchus pacificus] >ADV58325.1 cellulase 2, partial [Pristionchus pacificus] >ADV58327.1 cellulase 2, partial [Pristionchus pacificus] >ADV58331.1 cellulase 2, partial [Pristionchus pacificus] >ADV58334.1 cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 232.6 bits (592), Expect = 3.000e-57
Identity = 126/351 (35.90%), Postives = 183/351 (52.14%), Query Frame = 0
Query:  204 LNWTIDEVIAFLIDHKINAIRLPFSLEFAL-TPMDVQEAKAGGGFGELQYPDRGKISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSRLWYDPEKYSEATVMWGWGHWNLFGLDVMNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFLNGDGRDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDVSNMLYFNDFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSCK--NKDGVVQEHLAEWMVENCFQSNFWWALNPGSSDTDGLMSPDWSHFDPFKMNLLGKVQPDPSTFTFDKASNQVCIRHGAPPNPQC 552
            LN+ +D    F+ ++  NAIR+PFSLE     P ++    A               +P   G T+ +++D+    A E G+LI+LD H + P  G+S LWY+ E             WN+F +D+ NE HD ASWG  N  TD+N   ER    I   +  + GLFFVEG+               WG  L    + PI+T   ++N+RVVY+PH YGP V +   FN   FPNNL  ++ +++G+++  T + +VVGEWGG  +  +KD    +   EW+   C  +NF+W LNP S+DT GL+  DW    P K+NL  + QP+P+   F   + Q+CI  GA P   C
Sbjct:   33 LNFYLD----FIKNNNFNAIRVPFSLEMVKNNPSNLNINCA--------------TNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQKFTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAER----IINSLSSFLGLFFVEGI--------------EWGNRLENVAQFPINTGNPSVNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGIYMVKYGFIVNQTGQPVVVGEWGGRAEVGSKDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPT--KFQAQNGQICITAGAFPEAHC 345          
BLAST of NO17G01000 vs. NCBI_GenBank
Match: ADV58316.1 (cellulase 2, partial [Pristionchus pacificus] >ADV58319.1 cellulase 2, partial [Pristionchus pacificus] >ADV58329.1 cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 232.6 bits (592), Expect = 3.000e-57
Identity = 127/351 (36.18%), Postives = 183/351 (52.14%), Query Frame = 0
Query:  204 LNWTIDEVIAFLIDHKINAIRLPFSLEFAL-TPMDVQEAKAGGGFGELQYPDRGKISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSRLWYDPEKYSEATVMWGWGHWNLFGLDVMNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFLNGDGRDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDVSNMLYFNDFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSCK--NKDGVVQEHLAEWMVENCFQSNFWWALNPGSSDTDGLMSPDWSHFDPFKMNLLGKVQPDPSTFTFDKASNQVCIRHGAPPNPQC 552
            LN+ +D    F+ ++  NAIR+PFSLE     P ++    A               +P   G T+ +++D+    A E G+LI+LD H + P  G+S LWY+ E             WN+F +D+ NE HD ASWG  N  TD+N   ER    I   +  + GLFFVEG+               WG  L    + PI+T   +LN+RVVY+PH YGP V +   FN   FPNNL  ++ +++G+++  T + +VVGEWGG  +  +KD    +   EW+   C  +NF+W LNP S+DT GL+  DW    P K+NL  + QP+P+   F   + Q+CI  GA P   C
Sbjct:   33 LNFYLD----FIKNNNFNAIRVPFSLEMVKNNPSNLNINCA--------------TNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQKFTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAER----IINSLSSFLGLFFVEGI--------------EWGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGMYMVKYGFIVNQTGQPVVVGEWGGRAEVGSKDMTWNQWYIEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPT--KFQAQNGQICITAGAFPEAHC 345          
BLAST of NO17G01000 vs. NCBI_GenBank
Match: ADV58317.1 (cellulase 2, partial [Pristionchus pacificus] >ADV58318.1 cellulase 2, partial [Pristionchus pacificus] >ADV58332.1 cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 232.6 bits (592), Expect = 3.000e-57
Identity = 126/351 (35.90%), Postives = 183/351 (52.14%), Query Frame = 0
Query:  204 LNWTIDEVIAFLIDHKINAIRLPFSLEFAL-TPMDVQEAKAGGGFGELQYPDRGKISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSRLWYDPEKYSEATVMWGWGHWNLFGLDVMNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFLNGDGRDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDVSNMLYFNDFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSCK--NKDGVVQEHLAEWMVENCFQSNFWWALNPGSSDTDGLMSPDWSHFDPFKMNLLGKVQPDPSTFTFDKASNQVCIRHGAPPNPQC 552
            LN+ +D    F+ ++  NAIR+PFSLE     P ++    A               +P   G T+ +++D+    A E G+LI+LD H + P  G+S LWY+ E             WN+F +D+ NE HD ASWG  N  TD+N   ER    I   +  + GLFFVEG+               WG  L    + PI+T   +LN+RVVY+PH YGP V +   FN   FPNNL  ++ +++G+++  T + +VVGEWGG  +  ++D    +   EW+   C  +NF+W LNP S+DT GL+  DW    P K+NL  + QP+P+   F   + Q+CI  GA P   C
Sbjct:   33 LNFYLD----FIKNNNFNAIRVPFSLEMVKNNPSNLNINCA--------------TNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQKFTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAER----IINSLSSFLGLFFVEGI--------------EWGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGIYMVKYGFIVNQTGQPVVVGEWGGRAEVGSRDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPT--KFQAQNGQICITAGAFPEAHC 345          
BLAST of NO17G01000 vs. NCBI_GenBank
Match: ADV58328.1 (cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 232.6 bits (592), Expect = 3.000e-57
Identity = 126/351 (35.90%), Postives = 183/351 (52.14%), Query Frame = 0
Query:  204 LNWTIDEVIAFLIDHKINAIRLPFSLEFAL-TPMDVQEAKAGGGFGELQYPDRGKISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSRLWYDPEKYSEATVMWGWGHWNLFGLDVMNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFLNGDGRDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDVSNMLYFNDFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSCK--NKDGVVQEHLAEWMVENCFQSNFWWALNPGSSDTDGLMSPDWSHFDPFKMNLLGKVQPDPSTFTFDKASNQVCIRHGAPPNPQC 552
            LN+ +D    F+ ++  NAIR+PFSLE     P ++    A               +P   G T+ +++D+    A E G+LI+LD H + P  G+S LWY+ E             WN+F +D+ NE HD ASWG  N  TD+N   ER    I   +  + GLFFVEG+               WG  L    + PI+T   +LN+RVVY+PH YGP V +   FN   FPNNL  ++ +++G+++  T + +VVGEWGG  +  ++D    +   EW+   C  +NF+W LNP S+DT GL+  DW    P K+NL  + QP+P+   F   + Q+CI  GA P   C
Sbjct:   33 LNFYLD----FIKNNNFNAIRVPFSLEMVKNNPSNLNINCA--------------TNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQKFTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAER----IINSLSSFLGLFFVEGI--------------EWGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLEGMYMVKYGFIVNQTGQPVVVGEWGGRAEVGSRDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPT--KFQAQNGQICITAGAFPEAHC 345          
The following BLAST results are available for this feature:
BLAST of NO17G01000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21124.19.800e-21861.61cellulase 2 [Nannochloropsis gaditana][more]
EWM26661.13.900e-8140.28cellulase 2 [Nannochloropsis gaditana][more]
EWM23139.12.300e-7338.54cellulase 2 [Nannochloropsis gaditana][more]
EWM20925.15.300e-7040.77cellulase 2 [Nannochloropsis gaditana][more]
EWM26490.12.700e-6635.33cellulase 2 [Nannochloropsis gaditana][more]
PDM84795.16.000e-5835.34hypothetical protein PRIPAC_33818 [Pristionchus pa... [more]
ADV58314.13.000e-5735.90cellulase 2, partial [Pristionchus pacificus] >ADV... [more]
ADV58316.13.000e-5736.18cellulase 2, partial [Pristionchus pacificus] >ADV... [more]
ADV58317.13.000e-5735.90cellulase 2, partial [Pristionchus pacificus] >ADV... [more]
ADV58328.13.000e-5735.90cellulase 2, partial [Pristionchus pacificus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL158nonsL158Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR036ncniR036Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR085ngnoR085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR084ngnoR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G01000.1NO17G01000.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632514gene_7792Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100041g8gene9289Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G01000.1NO17G01000.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G01000 ID=NO17G01000|Name=NO17G01000|organism=Nannochloropsis oceanica|type=gene|length=2734bp
AGGATTATTTCTGTCCACCACAGAGATGTACCTGTCTTATAACATTCACC
GGGCCAGCGGGTGGGTGCTTTTGGTGGTGGCCACGACCACTTGCTGCCTA
TTCACGGTCAATGCGCAACTCGAGCCCCAATACATCCCGGCCTCGACGGC
TGATAGCGTGACATGCTACCCCGCCGACTCCCTCGCTTGGCGTTCCGTGC
CCGGAAAAATGGTCGTGCATGGGGCACCTTTCGTCAAGAAACCTACGGCA
CCCGTTCCCCCCGCGCCACCCATGCGCGAACCCGGCAGGCCACTCCCCGT
AGACGTGGGCGTAGGCCCTGCGGGAGGCTTCGAGACTGCACCCAGGCCTC
CTATGCGACTGCCACAGCAGCAGCAACAACAACCATTTATGAGGCCCCCT
GCAGGGAATACGCGGCCAGGGCCCAATATGAACCCGGTGGTTTCCCAACA
GCGGGCCATCCCGGCCGTGCGGTTCTTACAGGAGGGACAGGAGCACCAGA
AGGTGGCAGGCGCGGTGGTGGATGGCGTGGGGATCGAAACACCAGATTGG
ATGGGACAGGGAGATGAGTTAACGGAAGAAGACAAGGCTGCAATTGCTCG
TGAGTCGATGTATGCCAACATTCAGATCAAGGGTTTGAACTGGgtacgtc
tgatgagaaagaggaaaggaggggaggtggggcttaccctctggggtatg
agcaaagctcaaacatcaacatcattaaaatattcactatttaatcgcat
ccatgcacacagtttggcttggaccgaattaacatcttcgaggggactaa
ctacaaggtatacggaagggagggaaaggcggaacatggggctgattggg
cagtccctctatgatctaccgtccctctcacattctctttgggagccgtg
cctcccttcttttctaatacacagACCATCGACGAAGTGATTGCCTTTTT
GATTGACCATAAGATCAATGCGATCCGTTTGCCTTTCTCCCTGGAGTTCG
CGCTCACGCCCATGGACGTGCAGGAGGCAAAGGCTGGGGGGGGATTCGGG
GAACTTCAATACCCGGATCGGGGGAAGATCTCGCCCGCATATTACGGgta
tattatgtggttagggtgggagaagaattctatcacatacttatgccacg
actcatgttaacacacgcaactgtgcaacaatcacagAATGACGAGCTGG
GAAATCATTGACATTCTTTTCAAGACAGCAGGCGAGAACGGCATTTTGAT
TTTGCTCGATATGCACATGCTGGATCCAGCAAAGGGCGTGAGTCGATTGT
GGTACGACCCCGAGAAGTATTCAGAGGCCACTGTTATGTGGGGTTGGGgt
gagtggggagggagcaaggggggtgggatggggcaggggaaaaccgattt
ccattgtaaaacaaaactgtttatcaatattcacaaacatgtatacatac
aagaacgtatcctgaagcgctacgtagGCCATTGGAATCTTTTTGGGTTG
GACGTCATGAACGAGTGTCACGACCATGCTTCTTGGGGCACGGGCAACCC
CATGACCGACTTTAATTCTTACGTTGAACGATTCATGCTGTTCATCAACG
AGAGAGTCCCAGAGTACCGCGGGCTCTTTTTTGTGGAAGGGgtgagtatt
aaagacaaaggggagaaacggatccaagaggaacgactctacacggttca
agcggcattaagtgtttttttggattttcccactcatctttcccacccac
ccacccacccacccacccaccatccaatccgtcctctatttagGTCTTCC
TTAACGGAGATGGGCGCGATCCCGGGCCTTATCCGTACTGGTGGGGTGGG
AACCTGATGGGGGCTGACAAACACCCTATTGATACCAAGATTGCTGCCCT
GAACGATCGTGTGGTGTACGCGCCCCACATTTACGGACCCGATGTGTCGA
ACATGCTTTATTTCAACGATTTCCGCTTCCCCAACAACTTGAGGAATgta
cgtgcttgacggctatcacgactgctgctgctgaataaagagtcacgatg
tgtgtgtgtgtatgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtctttt
aaaagtttgttctcgtcacttctaacacttaccctctatcattttcactt
ttcctcttccaaatcattccaccctagGTATGGGACCTCCAATTCGGCTG
GCTTATCAAAAGCACGCGCAAAGCCCTGGTGGTGGGAGAATGGGGAGGCA
GCTGCAAAAACAAGGACGGCGTCGTGCAAGAGCACCTTGCTGAATGGATG
GTCGAAAATTGTTTTCAGTCCAACTTCTGGTGGGCACTTAATCCCGGATC
GTCTGACACCGACGgtaagaaggaaggaggacaggagggattcggcctgc
acgatttttatgcaagtgaagttcatggcaacgtgttcgattgaaatatt
tctccctccctgtctccctctctcaatccctccccctccctatttctctg
ccagGCCTCATGTCTCCAGACTGGTCCCATTTCGATCCCTTTAAAATGAA
CCTGTTGGGAAAGGTGCAGCCCGACCCCTCTACCTTCACCTTCGACAAAG
CCAGCAATCAAGTTTGTATCCGTCACGGCGCCCCACCCAATCCCCAATGC
GCCAGTAATATCGATGCTGTTGCGTCGCGGCAGCCTAGCCAGGTAGGGTA
TGATAACCCCTCACCAATGCGTGGTCGGCCGTGA
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protein sequence of NO17G01000.1

>NO17G01000.1-protein ID=NO17G01000.1-protein|Name=NO17G01000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=579bp
MYLSYNIHRASGWVLLVVATTTCCLFTVNAQLEPQYIPASTADSVTCYPA
DSLAWRSVPGKMVVHGAPFVKKPTAPVPPAPPMREPGRPLPVDVGVGPAG
GFETAPRPPMRLPQQQQQQPFMRPPAGNTRPGPNMNPVVSQQRAIPAVRF
LQEGQEHQKVAGAVVDGVGIETPDWMGQGDELTEEDKAAIARESMYANIQ
IKGLNWTIDEVIAFLIDHKINAIRLPFSLEFALTPMDVQEAKAGGGFGEL
QYPDRGKISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSR
LWYDPEKYSEATVMWGWGHWNLFGLDVMNECHDHASWGTGNPMTDFNSYV
ERFMLFINERVPEYRGLFFVEGVFLNGDGRDPGPYPYWWGGNLMGADKHP
IDTKIAALNDRVVYAPHIYGPDVSNMLYFNDFRFPNNLRNVWDLQFGWLI
KSTRKALVVGEWGGSCKNKDGVVQEHLAEWMVENCFQSNFWWALNPGSSD
TDGLMSPDWSHFDPFKMNLLGKVQPDPSTFTFDKASNQVCIRHGAPPNPQ
CASNIDAVASRQPSQVGYDNPSPMRGRP*
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Synonyms
Publications