NO17G00920, NO17G00920 (gene) Nannochloropsis oceanica

Overview
NameNO17G00920
Unique NameNO17G00920
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3287
Alignment locationchr17:299943..303229 +

Link to JBrowse

Properties
Property NameValue
DescriptionCellulase 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:299943..303229 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR001547Glyco_hydro_5
Homology
BLAST of NO17G00920 vs. NCBI_GenBank
Match: EWM21124.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 828.6 bits (2139), Expect = 1.300e-236
Identity = 404/620 (65.16%), Postives = 466/620 (75.16%), Query Frame = 0
Query:   14 VLLVVATTTCCLFTVNAQLEPQYIPASTADSVTCYPADSLAWRSVPGKMVVHGAPFVKKPTAPVPPAPPMREPGRPLPVD--------VGVGPAGGFETAPRPPMRLPQQQQQQPFMRP--------------------------PAGNTRPGPNMNPVVSQQRAIPAVRFLQEGQE-----HQKVAGAVVDGVGIETPDWMG-QGDELTEEDKAAIARESMYANIQIKGLNWFGLDRINIFEGTNYKTIDEVIAFLIDHKINAIRLPFSLEFALTPMDVQEAKAGGGFGELQYPDRGKISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSRLWYDPEKYSEATVMWGWERILKRYVGHWNLFGLDVMNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFLNGDGRDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDVSNMLYFNDFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSCKNKDGVVQEHLAEWMVENCFQSNFWWALNPGSSDTDGLMSPDWSHFDPFKMNLLGKVQPDPSTFTFDKASNQVCIRHGAPPNPQCASNIDAVASRQPSQVGYDN 594
            +L + A   C + ++ AQLEPQY+PA++++SVTCYPAD+LAWRS+PGK+V+HGAPFVK     VPPA    +P  P+  D          + P  G    P+P      +  Q P                              P G  RP PNM+P    +   PAVR LQ  +       QKVAGAVV GV IE       + D+L EEDKAAIARESMYA+IQ+KGLNWFGLDRINIFEGTNYKTID+V+AF + H INA+RLPFSL FALTPMD +EA+AGGG GELQYPDRGKISP Y G+TSWEIID+LF+ A ENGILILLDMH LDP KGVSRLWYDP KYSEATV+WGWERIL RYV HWNLFGLD+MNECHDHASWG G+PMTDFN YVERF+LF++ERVP YRGLFFVEG+FLN  GRD  P+PYWWGGNL GADK+PID KIAALNDR+VYAPHIYGPDVSNM YFND+ FPNNL+NVWD QFGWLIKSTRKALVVGEWGGSC NKDG+VQEHLA+WM++NCFQSNFWWALNPGS+DTDGLMS DWSHFD  KM LLGKVQP+PS FT++KA++ VC+RHGAPPNPQCA ++  +     +Q   DN
Sbjct:   12 ILCINAAIACLVTSIYAQLEPQYVPAASSESVTCYPADALAWRSIPGKIVLHGAPFVKTHHKKVPPA----QPSEPIVTDXXXXXXXXXXIRPXXGVTPEPQPKPINGVKPPQPPVTXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGGAGRPLPNMDPFRPPELK-PAVRHLQTQEAAKAGGDQKVAGAVVGGVAIENGSGTAREEDDLDEEDKAAIARESMYASIQLKGLNWFGLDRINIFEGTNYKTIDQVMAFFVAHNINALRLPFSLAFALTPMDHEEAEAGGGQGELQYPDRGKISPEYIGLTSWEIIDLLFEKAKENGILILLDMHTLDPDKGVSRLWYDPAKYSEATVLWGWERILSRYVHHWNLFGLDIMNECHDHASWGKGDPMTDFNRYVERFILFVHERVPSYRGLFFVEGIFLNAMGRDQSPWPYWWGGNLFGADKYPIDVKIAALNDRIVYAPHIYGPDVSNMFYFNDWSFPNNLKNVWDNQFGWLIKSTRKALVVGEWGGSCNNKDGIVQEHLAQWMIDNCFQSNFWWALNPGSADTDGLMSQDWSHFDERKMALLGKVQPNPSKFTYEKATDMVCVRHGAPPNPQCADDLAHILKTPDTQQDQDN 626          
BLAST of NO17G00920 vs. NCBI_GenBank
Match: EWM26661.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 336.3 bits (861), Expect = 2.000e-88
Identity = 155/386 (40.16%), Postives = 228/386 (59.07%), Query Frame = 0
Query:  195 MYANIQ---IKGLNWFGLDRIN-IFEGTNYKTIDEVIAFLIDHKINAIRLPFSLEFALTPMDVQEAKAGGGFGELQYPDRGKISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSRLWYDPEKYSEATVMWGWERILKRYVGHWNLFGLDVMNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFLNGDGRDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDVSNMLYFN--DFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSCKNKDGVVQEHLAEWMVENCFQSNFWWALNPGSSDTDGLMSPDWSHFDPFKMNLLGKVQPDPSTFTFDKASNQVCIRHGAPPNPQC 575
            +YAN     +KG++WFG +     F G N+ T+D ++ F + HK N +R+P S+ F L P D +             P++  +     G T WEI+D +   A   G++++LDMH L P +    LWYD E+Y EA ++  W  I+  Y   WN+F LD+ NE H  A+WG   P TD+N + ER +  I+ + P ++GL+ VEGV  N +      YP+WWGGN  GA +HPI   +  + +RVVY+PH+YGPDV +  Y N       N L  VWD Q GWLI   +K +++GEWGGS K +D +VQ  LA+W+V+NC  +N WWA+NP SSDT G+M+ +W  +D  +++L+  + PDP+ F      +++C+R G  PNPQC
Sbjct:   85 IYANTAPFFVKGISWFGCEGHGYTFTGLNFTTVDTILNFFLQHKFNTVRIPVSVAFGLAPKDFK-------------PNQRFVGKGLKGKTIWEILDEVIDQAALRGLMVMLDMHTLGPQEATD-LWYD-EQYKEADILQAWSNIMAAYSIKWNVFALDLKNEPHGIATWGVSAPQTDYNKFYERAIAHIHTQFPNWKGLYMVEGVQYNKETDKVTDYPFWWGGNFGGAIQHPIYVPVPEVMNRVVYSPHVYGPDVYDHPYMNVPAAELANELVKVWDSQMGWLIPKLQKGMIIGEWGGSLKGRDEIVQTELAKWLVKNCMANNVWWAINPESSDTGGIMAWNWKTYDKRRLDLVDSIFPDPTQFGI--KHSKLCLRFGTYPNPQC 453          
BLAST of NO17G00920 vs. NCBI_GenBank
Match: EWM23139.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 310.8 bits (795), Expect = 9.100e-81
Identity = 162/410 (39.51%), Postives = 236/410 (57.56%), Query Frame = 0
Query:  174 DW---MGQGDELTEEDKAAIARESMYANIQIKGLNWFGLD-RINIFEGTNYKTIDEVIAFLIDHKINAIRLPFSLEFALTPMDVQEAKAGGGFGELQYPDRGKISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSRLWYDPEKYSEATVMWGWERILKRYVGHWNLFGLDVMNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFLNGDGRDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDV-SNMLYFNDFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSC--KNKDGVVQEHLAEWMVENCFQSNFWWALNPGSSDTDGLMSPDWSHFDPFKMNLLGKVQPDPSTFTFD-KASNQVCIRHGAPPNPQCA 576
            DW   +GQ  + T E+ + +   +    + +KGLNW+G +  + + +G    + +  ++FL  H+ NA+RLPFSLE+    +D   A                +     G+T  +++D +F  A   GILILLD+H++   KG++ LWYD E    A V+  W  +L+R+ G WNL G+D+ NE H  ASWG G+P TD+N++  + +  +  RVP++ G+FFVEG+      R   P+ YWWGGNL G  K+PI T    L+ RVVY+PHIYGP+V     YF D RFP+N+  +WD QFGW+ KST +A+V+GEWGGS     K    Q+ LAEW+V  C   NFWW LNP +    GL++ D+   D   + +L  VQP P+TF     A + +C+  GA  N +CA
Sbjct:  166 DWCLGVGQEPKYTSENGSVMLNGN---PLYLKGLNWYGFEGELFVLDGLAVWSPERFMSFLASHRFNALRLPFSLEWLARGLDSPLANI------------YVVQEDMRGLTQGQVMDRIFDAAAAQGILILLDLHVISVEKGITDLWYD-ETADGALVLDLWTLLLRRFAGRWNLLGIDLKNEPHGIASWGHGHPKTDWNAFATKSIQTLATRVPDFHGVFFVEGI---ERPRWNSPHAYWWGGNLEGVRKYPISTGSEDLDRRVVYSPHIYGPEVFPRHRYFQDSRFPDNMPGIWDHQFGWIEKSTGRAVVLGEWGGSIVGDRKAAANQQKLAEWLVHACIPDNFWWCLNPATEFNGGLLARDYQAVDKNVLQMLHYVQPKPTTFHGGIGAGDPLCVVDGAFANVRCA 556          
BLAST of NO17G00920 vs. NCBI_GenBank
Match: EWM20925.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 296.2 bits (757), Expect = 2.300e-76
Identity = 146/358 (40.78%), Postives = 206/358 (57.54%), Query Frame = 0
Query:  200 QIKGLNWFGLDR----INIFEGTNYKTIDEVIAFLIDHKINAIRLPFSLEFALTPMDVQEAKAGGGFGELQYPDRG--KISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSRLWYDPEKYSEATVMWGWERILKRYVGHWNLFGLDVMNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFLNGDGRDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDVSNMLYFNDFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSCKNKDGVVQEHLAEWMVENCFQSNFWWALNPGSSDTDGLMSPDWSHFDPFKMNLLGKVQPDPS 552
            +IKG+NWFG +     ++   G   KT+ + +  L  H  NAIRLPFS++ AL               +  YP+ G  +   +   +TS +I+D L + AG+ G++++LD H LDP +G+S LWYD E Y E  ++  W+ +L R+  HWN+F LD+ NE H   SWG+G  +TD+ +  ER +  I    P++RGLFFV G++  G         +WWGGN     +HP+D     LN RVVY PH+YGPDV    YF+ + FP+NL  VWDL +G+L      A+VV EWGG C+ KD   QE +A ++ E     NF+W LNP S DT G++  DWS     K+ LL  VQP+PS
Sbjct:   33 RIKGINWFGFETPDKCVHGLWGGLSKTLTDYLDLLAFHGFNAIRLPFSVKLALAL-------------DTTYPEPGFVQADASLSSLTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDRGISDLWYD-EGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGIWGGGG--------HWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQSYFSSWSFPDNLPAVWDLHWGFLSGVLETAVVVSEWGGFCRGKDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPS 368          
BLAST of NO17G00920 vs. NCBI_GenBank
Match: EWM26490.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 279.6 bits (714), Expect = 2.300e-71
Identity = 157/442 (35.52%), Postives = 233/442 (52.71%), Query Frame = 0
Query:  135 MNPVVSQQRAIPAVRFLQEGQEHQKVAGAVVDGVGIETPDWMGQGDELTEEDKAAIARESMYANIQIKGLNWFGLDRIN-IFEGTNYKTIDEVIAFLIDHKINAIRLPFSLEFALTPMDVQEAKAGGGFGELQYPDRGKISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSRLWYDPEKYSEATVMWGWERILKRYVGHWNLFGLDVMNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFL-NGDGRDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDVSNMLYFNDFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSCKNKDGVVQEHLAEWMVENCFQSNFWWALNPGSSDTDGLMSPDWSHFDPFKMNLLGKVQPDPSTFTFDKASNQVCIRHGAPPNPQC 575
            M  +V+    + A R L +     KV+      + + + DW  +G E+    +             +KG+++FG +  N +  G    T D++  FL +   NA+RLPFS   AL P     A                I    + +T+ E+I  +   A E GILI+LDMH L+    +  LWYD +KYS   V   W+ +L  +   WNLF +D+ NE H  A+WG+G   TD+N+  E    ++ ++ P+Y+GL FVEG  L +           WWGG+L G  + PID    ALN R+VY+PH+YGPD     YF    FP+N+ ++W  Q+ ++ + T +A+VVGEWGG  +N+D + Q+  A+++V+ C +  F+W LNP S DT GL+  D+    P K+ LL KVQP P TF   K S+Q CI  GA  NP+C
Sbjct:   33 MGGLVNMNPRLRATRQLAKASGSSKVSTPA--DLCVASLDWTSEGGEILLNGQP----------FHLKGVSYFGFETPNEVPHGLWSVTRDQIFGFLRNESFNAVRLPFSTALALEPNKKVNANT--------------IEKELHDLTALELIGNIIDKAAEYGILIMLDMHRLN-EDFIPELWYD-DKYSMDDVKEAWDNLLTAFGDRWNLFAIDLKNEPHGVATWGSGKATTDWNTAAEELATYLYKKHPQYKGLVFVEGTQLASAKHHKLDKNNKWWGGDLEGVQEFPIDLGSDALNKRLVYSPHVYGPDAFVQPYFEAKNFPDNMPDIWKKQWAFVEEQTDRAVVVGEWGGRYENQDKIWQDSFAKFLVDECLEDTFYWCLNPNSGDTGGLLDYDFLTPMPKKLALLAKVQPHP-TFITVKGSDQYCISPGAYANPKC 445          
BLAST of NO17G00920 vs. NCBI_GenBank
Match: PDM84795.1 (hypothetical protein PRIPAC_33818 [Pristionchus pacificus])

HSP 1 Score: 248.1 bits (632), Expect = 7.300e-62
Identity = 136/390 (34.87%), Postives = 198/390 (50.77%), Query Frame = 0
Query:  201 IKGLNWFGLDRINIFEGTNYK-------TIDEVIAFLIDHKINAIRLPFSLEFALTPMDVQEAKAGGGFGELQYPDRGKISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSRLWYDPEKYSEATVMWGWERILKRYVGH-------WNLFGLDVMNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFLNGDGRDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDVSNMLYFNDFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSCK--NKDGVVQEHLAEWMVENCFQSNFWWALNPGSSDTDGLMSPDWSHFDPFKMNLLGKVQPDPSTFTFDKASNQVCIRHGAPPNPQC 575
            +KG+N+FG      FE   Y         ++  + F+ ++  NAIR+PFSLE             G              +P   G T+ +++D     A E G+LI+LD H + P  G+S LWY+ E Y E+ V+  W+ ++ RY          WN+F +D+ NE HD ASWG  N  TD+N   ER    I   +  + GLFFVEG+               WG  L    + PI+T  A+LN+RV+Y+PH YGP V +   FN   FPNNL  ++  ++G+++  T   +VVGEWGG  +  ++D    +   EW+   C  +NF+W LNP S+DT GL+  DW    P K+NL  + QP+P+   F   + Q+CI  GA P   C
Sbjct:   25 LKGINYFG------FESETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCGS-------------NPGLCGKTALQLLDAFIDRAAERGLLIMLDNHRITPGGGISELWYNNE-YPESQVISLWQSLITRYSDRQVQLKWIWNVFAIDLKNEPHDSASWGNSNAATDWNKAAER----IINSLSSFPGLFFVEGI--------------EWGNRLENVAQFPINTGNASLNNRVIYSPHCYGPSVYDRPEFNTQDFPNNLDGIYMAKYGFIVNQTGHPVVVGEWGGRAEVGSRDMAWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPTPRKINLTNRAQPNPT--KFQPQNGQICITAGAFPEAHC 374          
BLAST of NO17G00920 vs. NCBI_GenBank
Match: AFA52581.1 (putative endogluconase [Vaucheria litorea])

HSP 1 Score: 241.9 bits (616), Expect = 5.200e-60
Identity = 141/411 (34.31%), Postives = 211/411 (51.34%), Query Frame = 0
Query:  200 QIKGLNWFGLD-RINIFEGT-NYKTIDEVIAFLIDHKINAIRLPFSLEFALTPMDVQEAKAGGGFGELQYPDRGKISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSRLWYDPEKYSEATVMWGWERILKRYVGHW-NLFGLDVMNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFLNGDG----RDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDVSNMLYFNDFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSCKNKDGVVQEHLAEWMVENCFQSNFWWALNPGSSDTDGLMSPDW-----SHFDPFKMNLLGKVQPDPSTFTFDKASNQVCIRHGAPPNPQCASNIDAVASRQPSQVGYDNPLTNA 599
            ++KG NWFG +  +NI  G     T+DEV+ FL  +  N +R+P SL  AL      + K        QY      S       SW+ I+ L   A E G+L+L D H L   +  + LWY  + Y E   + GW  I++++ G W N  G+D+ NE H  A+WG G   TD+N   ER +  I E++P Y  L FVEG+   G       D      +WG N  G     +D     LN  +VY+PHIYGPD+ +  YFN   FP+N+  +W+ Q G++   T KA+++GEWGG  + KD ++QE   ++M++ C   +F+W++ P S D  GL++  W          FK+ L+ + QP PS FT   + +Q C+  GA  +  C +N +   SR+   +   N L +A
Sbjct:   59 RLKGANWFGFNTSLNILHGLWGDVTMDEVLDFLAANDFNGLRIPLSLSLALD----NQTKIS------QYQCVECTSD-----LSWDAIERLMDKAAERGLLVLFDFHKLADGES-TELWYS-DNYPEEKFIEGWVNIIEKF-GSWPNFMGIDLFNEPHISATWGKGLE-TDWNKGAERIVQGIVEQIPTYNKLIFVEGISSGGSSTPYDEDDPANDQFWGSNFFGLYDAEVDFGTPELNKLLVYSPHIYGPDLYDHDYFNASDFPDNMPEIWEKQIGFIESLTGKAVIIGEWGGKMEGKDAILQEKWVQYMLDACISGSFYWSVTPNSGDLGGLLTESWDIPQSGDTQFFKLTLIAEAQPTPSLFTQPISGDQYCLDFGAFADNSCWTNTN---SRRDISLDLGNLLVSA 447          
BLAST of NO17G00920 vs. NCBI_GenBank
Match: ADV58321.1 (cellulase 2, partial [Pristionchus pacificus] >ADV58326.1 cellulase 2, partial [Pristionchus pacificus] >ADV58330.1 cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 238.0 bits (606), Expect = 7.500e-59
Identity = 132/378 (34.92%), Postives = 199/378 (52.65%), Query Frame = 0
Query:  201 IKGLNWFGLDRINIF-EGTNYKTIDEVIAFLIDHKINAIRLPFSLEFAL-TPMDVQEAKAGGGFGELQYPDRGKISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSRLWYDPEKYSEATVMWGWERILKRYVGHWNLFGLDVMNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFLNGDGRDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDVSNMLYFNDFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSCK--NKDGVVQEHLAEWMVENCFQSNFWWALNPGSSDTDGLMSPDWSHFDPFKMNLLGKVQPDPSTFTFDKASNQVCIRHGAPPNPQC 575
            +KG+N+FG +       G     ++  + F+ ++  NAIR+PFSLE     P ++    A               +P   G T+ +++D+    A E G+LI+LD H + P  G+S LWY+ + YSE+      ++  K +   WN+F +D+ NE HD ASWG  N  TD+N   ER    I   +  + GLFFVEG+               WG  L    + PI+T   +LN+RVVY+PH YGP V +   FN   FPNN+  ++ +++G+++  T + +VVGEWGG  +  +KD    +   EW+   C  +NF+W LNP S+DT GL+  DW    P K+NL  + QP+P+   F   + Q+CI  GA P   C
Sbjct:   10 LKGINYFGFETETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCA--------------TNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNND-YSES------QKFTKTHC-RWNVFAIDLKNEPHDSASWGNSNAATDWNKAAER----IINSLSSFLGLFFVEGI--------------EWGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNVDGIYMVKYGFIVNQTGQPVVVGEWGGRAEVGSKDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPT--KFQAQNGQICITAGAFPEAHC 345          
BLAST of NO17G00920 vs. NCBI_GenBank
Match: ADV58314.1 (cellulase 2, partial [Pristionchus pacificus] >ADV58323.1 cellulase 2, partial [Pristionchus pacificus] >ADV58325.1 cellulase 2, partial [Pristionchus pacificus] >ADV58327.1 cellulase 2, partial [Pristionchus pacificus] >ADV58331.1 cellulase 2, partial [Pristionchus pacificus] >ADV58334.1 cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 237.3 bits (604), Expect = 1.300e-58
Identity = 132/378 (34.92%), Postives = 198/378 (52.38%), Query Frame = 0
Query:  201 IKGLNWFGLDRINIF-EGTNYKTIDEVIAFLIDHKINAIRLPFSLEFAL-TPMDVQEAKAGGGFGELQYPDRGKISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSRLWYDPEKYSEATVMWGWERILKRYVGHWNLFGLDVMNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFLNGDGRDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDVSNMLYFNDFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSCK--NKDGVVQEHLAEWMVENCFQSNFWWALNPGSSDTDGLMSPDWSHFDPFKMNLLGKVQPDPSTFTFDKASNQVCIRHGAPPNPQC 575
            +KG+N+FG +       G     ++  + F+ ++  NAIR+PFSLE     P ++    A               +P   G T+ +++D+    A E G+LI+LD H + P  G+S LWY+ E Y E+      ++  K +   WN+F +D+ NE HD ASWG  N  TD+N   ER    I   +  + GLFFVEG+               WG  L    + PI+T   ++N+RVVY+PH YGP V +   FN   FPNNL  ++ +++G+++  T + +VVGEWGG  +  +KD    +   EW+   C  +NF+W LNP S+DT GL+  DW    P K+NL  + QP+P+   F   + Q+CI  GA P   C
Sbjct:   10 LKGINYFGFETETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCA--------------TNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNE-YPES------QKFTKTHC-RWNVFAIDLKNEPHDSASWGNSNAATDWNKAAER----IINSLSSFLGLFFVEGI--------------EWGNRLENVAQFPINTGNPSVNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGIYMVKYGFIVNQTGQPVVVGEWGGRAEVGSKDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPT--KFQAQNGQICITAGAFPEAHC 345          
BLAST of NO17G00920 vs. NCBI_GenBank
Match: ADV58316.1 (cellulase 2, partial [Pristionchus pacificus] >ADV58319.1 cellulase 2, partial [Pristionchus pacificus] >ADV58329.1 cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 237.3 bits (604), Expect = 1.300e-58
Identity = 133/378 (35.19%), Postives = 198/378 (52.38%), Query Frame = 0
Query:  201 IKGLNWFGLDRINIF-EGTNYKTIDEVIAFLIDHKINAIRLPFSLEFAL-TPMDVQEAKAGGGFGELQYPDRGKISPAYYGMTSWEIIDILFKTAGENGILILLDMHMLDPAKGVSRLWYDPEKYSEATVMWGWERILKRYVGHWNLFGLDVMNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFLNGDGRDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDVSNMLYFNDFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSCK--NKDGVVQEHLAEWMVENCFQSNFWWALNPGSSDTDGLMSPDWSHFDPFKMNLLGKVQPDPSTFTFDKASNQVCIRHGAPPNPQC 575
            +KG+N+FG +       G     ++  + F+ ++  NAIR+PFSLE     P ++    A               +P   G T+ +++D+    A E G+LI+LD H + P  G+S LWY+ E Y E+      ++  K +   WN+F +D+ NE HD ASWG  N  TD+N   ER    I   +  + GLFFVEG+               WG  L    + PI+T   +LN+RVVY+PH YGP V +   FN   FPNNL  ++ +++G+++  T + +VVGEWGG  +  +KD    +   EW+   C  +NF+W LNP S+DT GL+  DW    P K+NL  + QP+P+   F   + Q+CI  GA P   C
Sbjct:   10 LKGINYFGFETETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCA--------------TNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNE-YPES------QKFTKTHC-RWNVFAIDLKNEPHDSASWGNSNAATDWNKAAER----IINSLSSFLGLFFVEGI--------------EWGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGMYMVKYGFIVNQTGQPVVVGEWGGRAEVGSKDMTWNQWYIEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPT--KFQAQNGQICITAGAFPEAHC 345          
The following BLAST results are available for this feature:
BLAST of NO17G00920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21124.11.300e-23665.16cellulase 2 [Nannochloropsis gaditana][more]
EWM26661.12.000e-8840.16cellulase 2 [Nannochloropsis gaditana][more]
EWM23139.19.100e-8139.51cellulase 2 [Nannochloropsis gaditana][more]
EWM20925.12.300e-7640.78cellulase 2 [Nannochloropsis gaditana][more]
EWM26490.12.300e-7135.52cellulase 2 [Nannochloropsis gaditana][more]
PDM84795.17.300e-6234.87hypothetical protein PRIPAC_33818 [Pristionchus pa... [more]
AFA52581.15.200e-6034.31putative endogluconase [Vaucheria litorea][more]
ADV58321.17.500e-5934.92cellulase 2, partial [Pristionchus pacificus] >ADV... [more]
ADV58314.11.300e-5834.92cellulase 2, partial [Pristionchus pacificus] >ADV... [more]
ADV58316.11.300e-5835.19cellulase 2, partial [Pristionchus pacificus] >ADV... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL158nonsL158Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL156nonsL156Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR085ngnoR085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR084ngnoR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR028ngnoR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004813NSK004813Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G00920.1NO17G00920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632514gene_7792Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100041g8gene9289Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G00920.1NO17G00920.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G00920 ID=NO17G00920|Name=NO17G00920|organism=Nannochloropsis oceanica|type=gene|length=3287bp
AGGATTATTTCTGTCCACCACAGAGATGTACCTGTCTTATAACATTCACC
GGGCCAGCGGGTGGGTGCTTTTGGTGGTGGCCACGACCACTTGCTGCCTA
TTCACGGTCAATGCGCAACTCGAGCCCCAATACATCCCGGCCTCGACGGC
TGATAGCGTGACATGCTACCCCGCCGACTCCCTCGCTTGGCGTTCCGTGC
CCGGAAAAATGGTCGTGCATGGGGCACCTTTCGTCAAGAAACCTACGGCA
CCCGTTCCCCCCGCGCCACCCATGCGCGAACCCGGCAGGCCACTCCCCGT
AGACGTGGGCGTAGGCCCTGCGGGAGGCTTCGAGACTGCACCCAGGCCTC
CTATGCGACTGCCACAGCAGCAGCAACAACAACCATTTATGAGGCCCCCT
GCAGGGAATACGCGGCCAGGGCCCAATATGAACCCGGTGGTTTCCCAACA
GCGGGCCATCCCGGCCGTGCGGTTCTTACAGGAGGGACAGGAGCACCAGA
AGGTGGCAGGCGCGGTGGTGGATGGCGTGGGGATCGAAACACCAGATTGG
ATGGGACAGGGAGATGAGTTAACGGAAGAAGACAAGGCTGCAATTGCTCG
TGAGTCGATGTATGCCAACATTCAGATCAAGGGTTTGAACTGGgtacgtc
tgatgagaaagaggaaaggaggggaggtggggcttaccctctggggtatg
agcaaagctcaaacatcaacatcattaaaatattcactatttaatcgcat
ccatgcacacagTTTGGCTTGGACCGAATTAACATCTTCGAGGGGACTAA
CTACAAGgtatacggaagggagggaaaggcggaacatggggctgattggg
cagtccctctatgatctaccgtccctctcacattctctttgggagccgtg
cctcccttcttttctaatacacagACCATCGACGAAGTGATTGCCTTTTT
GATTGACCATAAGATCAATGCGATCCGTTTGCCTTTCTCCCTGGAGTTCG
CGCTCACGCCCATGGACGTGCAGGAGGCAAAGGCTGGGGGGGGATTCGGG
GAACTTCAATACCCGGATCGGGGGAAGATCTCGCCCGCATATTACGGgta
tattatgtggttagggtgggagaagaattctatcacatacttatgccacg
actcatgttaacacacgcaactgtgcaacaatcacagAATGACGAGCTGG
GAAATCATTGACATTCTTTTCAAGACAGCAGGCGAGAACGGCATTTTGAT
TTTGCTCGATATGCACATGCTGGATCCAGCAAAGGGCGTGAGTCGATTGT
GGTACGACCCCGAGAAGTATTCAGAGGCCACTGTTATGTGGGGTTGGGgt
gagtggggagggagcaagggggggtgggatgggggcaggggaaaaccgat
ttccattgtaaaacaaaactgtttatcaatattcacaaacatgtatacat
acaagAACGTATCCTGAAGCGCTACGTAGGCCATTGGAATCTTTTTGGGT
TGGACGTCATGAACGAGTGTCACGACCATGCTTCTTGGGGCACGGGCAAC
CCCATGACCGACTTTAATTCTTACGTTGAACGATTCATGCTGTTCATCAA
CGAGAGAGTCCCAGAGTACCGCGGGCTCTTTTTTGTGGAAGGGgtgagta
ttaaagacaaaggggagaaacggatccaagaggaacgactctacacggtt
caagcggcattaagtgtttttttggattttcccactcatctttcccaccc
acccacccacccacccacccaccatccaatccgtcctctatttagGTCTT
CCTTAACGGAGATGGGCGCGATCCCGGGCCTTATCCGTACTGGTGGGGTG
GGAACCTGATGGGGGCTGACAAACACCCTATTGATACCAAGATTGCTGCC
CTGAACGATCGTGTGGTGTACGCGCCCCACATTTACGGACCCGATGTGTC
GAACATGCTTTATTTCAACGATTTCCGCTTCCCCAACAACTTGAGGAATg
tacgtgcttgacggctatcacgactgctgctgctgaataaagagtcacga
tgtgtgtgtgtgtgtatgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtg
tcttttaaaagtttgttctcgtcacttctaacacttaccctctatcattt
tcacttttcctcttccaaatcattccaccctagGTATGGGACCTCCAATT
CGGCTGGCTTATCAAAAGCACGCGCAAAGCCCTGGTGGTGGGAGAATGGG
GAGGCAGCTGCAAAAACAAGGACGGCGTCGTGCAAGAGCACCTTGCTGAA
TGGATGGTCGAAAATTGTTTTCAGTCCAACTTCTGGTGGGCACTTAATCC
CGGATCGTCTGACACCGACGgtaagaaggaaggaggacaggaggggattc
ggcctgcacgatttttatgcaagtgaagttcatggcaacgtgttcgattg
aaatatttctccctccctgtctccctctctcaatccctccccctccctat
ttctctgccagGCCTCATGTCTCCAGACTGGTCCCATTTCGATCCCTTTA
AAATGAACCTGTTGGGAAAGGTGCAGCCCGACCCCTCTACCTTCACCTTC
GACAAAGCCAGCAATCAAGTTTGTATCCGTCACGGCGCCCCACCCAATCC
CCAATGCGCCAGTAATATCGATGCTGTTGCGTCGCGGCAGCCTAGCCAGG
TAGGGTATGATAACCCCCTCACCAATGCGTGGTCGGCCGTGAATCGATTG
AGGGGATCGACATAGATGGAAGAAGGGAAAGAGGGAGGGAAAGAGGGACG
GAAAATGTGCAGATACCAACTTAGGGTGTAGTTAATTTTGGAGGGGATAA
TGCCGAGCAAGTAGAAGAGGGCGAGAGTTGTTGAATCCGACTGTGTACGC
TTGCTGTATTATTTATGTAGTGAATAGAAGGACAAAAGCGAGGATGACGG
AAGAGAGCGGTGATGACTATATGTATAACTAGAGTATAAATGGGATAGTG
TGAAATTAGAACAGAAAGACATCGAGCAAGGATTTATGTGAAGCCTCGAC
ACTGCGAAAGGCGGGAAAAGGGAGAGAAGAAGTGAAGGTGGAGAGGTGGA
TGGGAGTGATGCGGCGGTATGAACTACCGAGAAAGATGTCAACCTAATTG
TATTTGTGCTGTTTTGAGAAACCAGGCGGGGAGCACCCGCGGCTTGCCAG
GAGGGAGCAAGACCAGGCAAAGAAATCCATGTATCTTTTTGAAAAAAACA
GAAAAACAAGAAAAAAGATAAAAGGGGTCAAGGGATA
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protein sequence of NO17G00920.1

>NO17G00920.1-protein ID=NO17G00920.1-protein|Name=NO17G00920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=610bp
MYLSYNIHRASGWVLLVVATTTCCLFTVNAQLEPQYIPASTADSVTCYPA
DSLAWRSVPGKMVVHGAPFVKKPTAPVPPAPPMREPGRPLPVDVGVGPAG
GFETAPRPPMRLPQQQQQQPFMRPPAGNTRPGPNMNPVVSQQRAIPAVRF
LQEGQEHQKVAGAVVDGVGIETPDWMGQGDELTEEDKAAIARESMYANIQ
IKGLNWFGLDRINIFEGTNYKTIDEVIAFLIDHKINAIRLPFSLEFALTP
MDVQEAKAGGGFGELQYPDRGKISPAYYGMTSWEIIDILFKTAGENGILI
LLDMHMLDPAKGVSRLWYDPEKYSEATVMWGWERILKRYVGHWNLFGLDV
MNECHDHASWGTGNPMTDFNSYVERFMLFINERVPEYRGLFFVEGVFLNG
DGRDPGPYPYWWGGNLMGADKHPIDTKIAALNDRVVYAPHIYGPDVSNML
YFNDFRFPNNLRNVWDLQFGWLIKSTRKALVVGEWGGSCKNKDGVVQEHL
AEWMVENCFQSNFWWALNPGSSDTDGLMSPDWSHFDPFKMNLLGKVQPDP
STFTFDKASNQVCIRHGAPPNPQCASNIDAVASRQPSQVGYDNPLTNAWS
AVNRLRGST*
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Synonyms
Publications