NO17G00850, NO17G00850 (gene) Nannochloropsis oceanica

Overview
NameNO17G00850
Unique NameNO17G00850
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2305
Alignment locationchr17:280907..283211 +

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Properties
Property NameValue
DescriptionProteasome-associated protein ecm29
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:280907..283211 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0032947protein-containing complex scaffold activity
Vocabulary: Biological Process
TermDefinition
GO:0043248proteasome assembly
GO:0043248proteasome assembly
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR024372Proteasome_stabil_ECM29
Vocabulary: Cellular Component
TermDefinition
GO:0000502proteasome complex
Homology
BLAST of NO17G00850 vs. NCBI_GenBank
Match: EWM21118.1 (proteasome-associated protein ecm29 [Nannochloropsis gaditana])

HSP 1 Score: 623.6 bits (1607), Expect = 7.200e-175
Identity = 428/683 (62.66%), Postives = 485/683 (71.01%), Query Frame = 0
Query:   24 FETVWRGVVEDKVENNSPHVR--------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPLPRLLQAQAVLVKLLRDKSDLGQEVAGKALGVIYSLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLRGPSATLQPTNLELNVPASLLPPSIPPSLDIGTHNPFRELCSLAAELGQPQLLYHFLALPSTHPAWSGRRASAYAKLSRGMEGEGG--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVISQYLDVIFEDLLKAAGSRKWRERQAAVAGLANLLPGRTFKEIMGEKEGAGEGGRRLESVWVTAFRAVDDLKESVQLAGIDLAKSLTQLTGRLSNREEAPGEEVKEVVGVVLPLLLTQGLVSKAKEVQAVAVMMLVRMVKGAGECLRPWLAELVSALIEAQSAIEPQQLQYMQFHATSSGMTEEGMEQLRYGLSRSGPLQEALDHCLKELDGPSLTSLLPSLLLHLRSGVGLNTRCCAANVVVVLATRFRLEIKPHLPSLLRVLAAGSLSERSSTAQRFFLSALATVAKIAPEGEEVRKIIIKLTKEYKRVADVVAWRGRRLPVVLALKHLIGAAAEGLEEGAWAIVLPLAYVGRFEEEEEGGEG 685
            F +VW GVVE KV +NSPHVR              A                                               LL LPRLL+AQ VLV LLRDKS+LGQE +GKALGV+ SLA                                    LLLRGPSAT  PT+LELN P+S LPP I  ++D+GT NPFRELC++A +LGQPQLLY+FLALPSTHP+W+GRRA  YAK + G  GEG             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            DL +AAGSRKWRERQAAVAGL  L+PGRTFKE+ G          RLE +W+  FRA+DDLKESVQ+AG+DLAK L Q+TGRLSN +E+P  EV+EVV V+LPLLL+QGL SKAKEVQ VAV++L+R+VKGAG CLRP+L EL+SALIEAQSAIEP QLQYMQFHA S  MTEE MEQLRYGLSRSGPLQEALD C+KELDGPSL+ L+PSLLL LRSGVGLNTRCCAAN+V+VL+TRFR E+K HLP+LLRVLAAG+L+ERSSTAQRFFLSALA VAK+AP GEEVR+ I++L +EY+RVAD+   R +RLPVVLAL+ L  AA EGLEE AWA VLPLAYVGRF EEEEGGEG
Sbjct:   29 FASVWEGVVEGKVRDNSPHVRAAATLWLLVLLWEAAAASAREGDMAREVQVQESHDATGAQSGAVQASDASIPAAQTETDTTALLSLPRLLEAQQVLVTLLRDKSELGQEASGKALGVLCSLA------GHGPQVSSSTIPSTAPSPSTALQELTNALVLLLRGPSATANPTHLELNTPSSQLPP-IQTNMDVGTLNPFRELCAMATDLGQPQLLYYFLALPSTHPSWAGRRAGLYAKGTPGPAGEGREEELQRALMPLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLCEAAGSRKWRERQAAVAGLGELMPGRTFKEVRG----------RLERLWIIGFRALDDLKESVQMAGMDLAKGLLQMTGRLSNTQESPAAEVEEVVRVILPLLLSQGLPSKAKEVQGVAVLVLLRVVKGAGACLRPYLPELMSALIEAQSAIEPAQLQYMQFHARSMDMTEEAMEQLRYGLSRSGPLQEALDICMKELDGPSLSRLMPSLLLQLRSGVGLNTRCCAANLVLVLSTRFRPELKVHLPALLRVLAAGALAERSSTAQRFFLSALAGVAKLAPGGEEVRRAILRLLREYRRVADLATHRSQRLPVVLALRQLCTAAGEGLEEAAWAAVLPLAYVGRF-EEEEGGEG 693          
BLAST of NO17G00850 vs. NCBI_GenBank
Match: XP_005854431.1 (proteasome component ecm29, partial [Nannochloropsis gaditana CCMP526] >EKU21930.1 proteasome component ecm29, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 298.1 bits (762), Expect = 6.900e-77
Identity = 230/338 (68.05%), Postives = 264/338 (78.11%), Query Frame = 0
Query:  185 LNVPASLLPPSIPPSLDIGTHNPFRELCSLAAELGQPQLLYHFLALPSTHPAWSGRRASAYAKLSRGMEGEGG--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVISQYLDVIFEDLLKAAGSRKWRERQAAVAGLANLLPGRTFKEIMGEKEGAGEGGRRLESVWVTAFRAVDDLKESVQLAGIDLAKSLTQLTGRLSNREEAPGEEVKEVVGVVLPLLLTQGLVSKAKEVQAVAVMMLVRMVKGAGECLRPWLAELVSALIEAQSAIEPQQLQYMQFHATSSGMTEEGMEQLRYGLSR 515
            LN P+S LPP I  ++D+GT NPFRELC++A +LGQP+LLY+FLALPSTHP+W+GRRA  YAK + G  GEG             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            DL +AAGSRKWRERQAAVAGL  L+PGRTFKE+ G          RLE +W+  FRA+DDLKESVQ+AG+DLAK L Q+TGRLSN +E+P  EV+EVV V+LPLLL+QGL SKAKEVQ VAV++L+R+VKGAG CLRP+L EL+SALIEAQSAIEP QLQYMQFHA S  MTEE ME   +G +R
Sbjct:    1 LNTPSSQLPP-IQTNMDVGTLNPFRELCAMATDLGQPKLLYYFLALPSTHPSWAGRRAGLYAKGTPGPAGEGREEELQRALMPLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLCEAAGSRKWRERQAAVAGLGELMPGRTFKEVRG----------RLERLWIIGFRALDDLKESVQMAGMDLAKGLLQMTGRLSNTQESPAAEVEEVVRVILPLLLSQGLPSKAKEVQGVAVLVLLRVVKGAGACLRPYLPELMSALIEAQSAIEPAQLQYMQFHARSMDMTEEAMEVGGWGAAR 327          
BLAST of NO17G00850 vs. NCBI_GenBank
Match: PNR62850.1 (hypothetical protein PHYPA_001274 [Physcomitrella patens])

HSP 1 Score: 244.2 bits (622), Expect = 1.200e-60
Identity = 149/478 (31.17%), Postives = 260/478 (54.39%), Query Frame = 0
Query:  203 GTHNPFRELCSLAAELGQPQLLYHFLALPSTHPAWSGRRASAYAKLSRGMEGEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVISQYLDVIFEDLLKAAGSRKWRERQAAVAGLANLLPGRTFKEIMGEKEGAGEGGRRLESVWVTAFRAVDDLKESVQLAGIDLAKSLTQLTGRLSNREEAPGEEVKEVVGVVLPLLLTQGLVSKAKEVQAVAVMMLVRMVKGAGECLRPWLAELVSALIEAQSAIEPQQLQYMQFHATSSGMTEEGMEQLRYGLSRSGPLQEALDHCLKELDGPSLTSLLPSLLLHLRSGVGLNTRCCAANVVVVLATRFRLEIKPHLPSLLRVLAAGSLSERSSTAQRFFLSALATVAKIAPEGEEVRKIIIKLTKEYKRVADVVAWRGRRLPVVLALKHLIGAAAEGLEEGAWAIVLPLAYVGRFEEEEE 681
            G  + ++ELC++A E+GQP L+Y F+ L +   + + +R +A+   +R  +  G                                                               I ++ D I EDLL  AGSR WR R+++ + LA+L+ GR F E+          G+ LE VW  AFRAVDD+KE+V+ +G  L +S++ L+ RLS+   +P ++ ++ + +VLP LLT+G++S   +V+ +++  ++++VKGAG  +RP + +LVS +IE+ S++E Q+L Y + HA   G+++E +E +R  +++  P+ + LD C++ +D  +L SL+P L+  ++SGVGLNTR      + +LA     ++KPH   LLR L +   SE+S+ +++ F +AL +VAK   E  +VRK+++     Y    D    R +R+   L LK L    A+ + +G + ++LP+ +V RF++E++
Sbjct: 1066 GNISTYKELCNIANEMGQPDLIYKFMDLANHQASLNSKRGAAFG-FARIAKQAG--------------------DALKPHLKTLVPKLVRYQYDPNKAIQDAMGHIWRSLVAEPKKTIDEFYDEIMEDLLSQAGSRLWRSRESSCSALADLIQGRRFSEV----------GKYLEKVWNVAFRAVDDIKETVRTSGDVLCRSVSSLSLRLSDNSLSPEKDARDTMAIVLPFLLTKGIMSTVSDVRRLSINTVMKLVKGAGAAIRPQMPDLVSCMIESLSSLEDQRLNYAELHAERVGISQEKLESVRIAVAKDSPMWDTLDLCIRHVDNSTLESLIPRLVQLIQSGVGLNTRVGVGKFISMLAQHSGPDMKPHSVVLLRALFSAVKSEKSAASRKAFAAALGSVAKYTSE-TQVRKLLLDAVALYNSEND----RDQRMVSALVLKEL-SRQADDVFKGNYTLILPMTFVARFDDEKD 1506          
BLAST of NO17G00850 vs. NCBI_GenBank
Match: XP_024395125.1 (LOW QUALITY PROTEIN: proteasome-associated protein ECM29 homolog [Physcomitrella patens])

HSP 1 Score: 244.2 bits (622), Expect = 1.200e-60
Identity = 149/478 (31.17%), Postives = 260/478 (54.39%), Query Frame = 0
Query:  203 GTHNPFRELCSLAAELGQPQLLYHFLALPSTHPAWSGRRASAYAKLSRGMEGEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVISQYLDVIFEDLLKAAGSRKWRERQAAVAGLANLLPGRTFKEIMGEKEGAGEGGRRLESVWVTAFRAVDDLKESVQLAGIDLAKSLTQLTGRLSNREEAPGEEVKEVVGVVLPLLLTQGLVSKAKEVQAVAVMMLVRMVKGAGECLRPWLAELVSALIEAQSAIEPQQLQYMQFHATSSGMTEEGMEQLRYGLSRSGPLQEALDHCLKELDGPSLTSLLPSLLLHLRSGVGLNTRCCAANVVVVLATRFRLEIKPHLPSLLRVLAAGSLSERSSTAQRFFLSALATVAKIAPEGEEVRKIIIKLTKEYKRVADVVAWRGRRLPVVLALKHLIGAAAEGLEEGAWAIVLPLAYVGRFEEEEE 681
            G  + ++ELC++A E+GQP L+Y F+ L +   + + +R +A+   +R  +  G                                                               I ++ D I EDLL  AGSR WR R+++ + LA+L+ GR F E+          G+ LE VW  AFRAVDD+KE+V+ +G  L +S++ L+ RLS+   +P ++ ++ + +VLP LLT+G++S   +V+ +++  ++++VKGAG  +RP + +LVS +IE+ S++E Q+L Y + HA   G+++E +E +R  +++  P+ + LD C++ +D  +L SL+P L+  ++SGVGLNTR      + +LA     ++KPH   LLR L +   SE+S+ +++ F +AL +VAK   E  +VRK+++     Y    D    R +R+   L LK L    A+ + +G + ++LP+ +V RF++E++
Sbjct: 1081 GNISTYKELCNIANEMGQPDLIYKFMDLANHQASLNSKRGAAFG-FARIAKQAG--------------------DALKPHLKTLVPKLVRYQYDPNKAIQDAMGHIWRSLVAEPKKTIDEFYDEIMEDLLSQAGSRLWRSRESSCSALADLIQGRRFSEV----------GKYLEKVWNVAFRAVDDIKETVRTSGDVLCRSVSSLSLRLSDNSLSPEKDARDTMAIVLPFLLTKGIMSTVSDVRRLSINTVMKLVKGAGAAIRPQMPDLVSCMIESLSSLEDQRLNYAELHAERVGISQEKLESVRIAVAKDSPMWDTLDLCIRHVDNSTLESLIPRLVQLIQSGVGLNTRVGVGKFISMLAQHSGPDMKPHSVVLLRALFSAVKSEKSAASRKAFAAALGSVAKYTSE-TQVRKLLLDAVALYNSEND----RDQRMVSALVLKEL-SRQADDVFKGNYTLILPMTFVARFDDEKD 1521          
BLAST of NO17G00850 vs. NCBI_GenBank
Match: PIA53838.1 (hypothetical protein AQUCO_00900435v1 [Aquilegia coerulea])

HSP 1 Score: 235.3 bits (599), Expect = 5.500e-58
Identity = 154/495 (31.11%), Postives = 256/495 (51.72%), Query Frame = 0
Query:  195 SIPPSLDIGTHNPFRELCSLAAELGQPQLLYHFLALPSTHPAWSGRRASA--YAKLSRGMEGEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVISQYLDVIFEDLLKAAGSRKWRERQAAVAGLANLLPGRTFKEIMGEKEGAGEGGRRLESVWVTAFRAVDDLKESVQLAGIDLAKSLTQLTGRLSNREEAPGEEVKEVVGVVLPLLLTQGLVSKAKEVQAVAVMMLVRMVKGAGECLRPWLAELVSALIEAQSAIEPQQLQYMQFHATSSGMTEEGMEQLRYGLSRSGPLQEALDHCLKELDGPSLTSLLPSLLLHLRSGVGLNTRCCAANVVVVLATRFRLEIKPHLPSLLRVLAAGSLSERSSTAQRFFLSALATVAKIAPEGEEVRKIIIKLTKEYKRVADVVAW----RGRRLPVVLALKHLIGAAAEGLEEGAWAIVLPLAYVGRFEEEEEGGE 684
            +I  SL  G  + ++ELCSLA E+GQP L+Y F+ L +   + + +R +A  ++K+++   GE                                                                I ++LD+IFEDLL   GSR WR R+A+   LA+ + GR F+++          G+ L+ +W  AFRA+DD+KE+V+ +G  L ++L+ LT RL +    P  +  + + +VLP LL++G+VSK   +Q  +V M++++ KGAG  +RP L ELV  ++E+ S++E Q+L Y++ HA ++G+  E ++ LR  +++  P+ E LD CLK +D  SL  L+P L   +RSGVGLNTR   A+ + +L  +   +IKP    LL+++    + ERS  A+R F S  A + K AP            ++  K + D  A     R  ++   + LK++   AA+ +  G  A + P+ +V RFE++++ G+
Sbjct: 1017 AIGESLSGGKLSTYKELCSLANEMGQPDLIYKFMDLANYQASLNSKRGAAFGFSKIAK-QAGEA----------------------LQPHLRLLVPRLVRYQYDPDKNVQDAMGNIWKSLVADSKKTIDEHLDLIFEDLLTQCGSRLWRSREASCLALADTIQGRKFEQV----------GKHLKRIWTAAFRAMDDIKETVRNSGDSLCRALSSLTIRLCDVSLTPMSDASKTMDIVLPFLLSEGIVSKVSSIQKASVGMVMKLSKGAGIAIRPHLPELVCCMLESLSSLEDQRLNYVELHAVNAGIKAEKLDNLRISVAKDSPMWETLDLCLKAVDTKSLDLLVPRLANMVRSGVGLNTRVGVASFISLLVQKVGSDIKPFTSMLLKLMFPAVVEERSGAAKRAFASTCAIILKYAPS-----------SQAQKLIEDTAALHTGDRNAQVSCAVLLKNISHIAAD-VVSGFHATIFPVTFVARFEDDKDVGD 1466          
BLAST of NO17G00850 vs. NCBI_GenBank
Match: XP_015617073.1 (PREDICTED: proteasome-associated protein ECM29 homolog [Oryza sativa Japonica Group] >ABA91356.2 HEAT repeat family protein, expressed [Oryza sativa Japonica Group])

HSP 1 Score: 233.0 bits (593), Expect = 2.700e-57
Identity = 169/589 (28.69%), Postives = 283/589 (48.05%), Query Frame = 0
Query:   96 LPRLLQAQAVLVKLLRDKSDLGQEVAGKALGVIYSLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLRGPSATLQPTNLELNVPASLLPPSIPPSLDIGTHNPFRELCSLAAELGQPQLLYHFLALPSTHPAWSGRRASA--YAKLSRGMEGEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVISQYLDVIFEDLLKAAGSRKWRERQAAVAGLANLLPGRTFKEIMGEKEGAGEGGRRLESVWVTAFRAVDDLKESVQLAGIDLAKSLTQLTGRLSNREEAPGEEVKEVVGVVLPLLLTQGLVSKAKEVQAVAVMMLVRMVKGAGECLRPWLAELVSALIEAQSAIEPQQLQYMQFHATSSGMTEEGMEQLRYGLSRSGPLQEALDHCLKELDGPSLTSLLPSLLLHLRSGVGLNTRCCAANVVVVLATRFRLEIKPHLPSLLRVLAAGSLSERSSTAQRFFLSALATVAKIAPEGEEVRKIIIKLTKEYKRVADVVAWRGRRLPVVLALKHLIGAAAEGLEEGAWAIVLPLAYVGRFEEEEEGG 683
            L  L Q Q  L  LL D++DL Q++A + + ++Y L                                     + L   S   Q   +  N                G  + ++ELCSLA E+GQP L+Y F+ L +   A + +R +A  ++K+++   GE                                                                I ++ D+I EDLL  +GSR WR R+A+   LA+++ GR +          G+  + L  +W+T FRA+DD+KE+V+ AG  L ++++ LT RL +       +  E + +VLP LL++G++SK   VQ  ++ +++++ KGAG  L+P L+ELVS ++E  S++E Q+L Y++ HA ++G+  E +E LR  +++  P+ E LD CLK +D  SL  L+P L   ++S VGLNTR   A+ + +L  +  +EIKP+  +LLR+L +  L E+SS A+R F S+ A V K A    + +K+I   T  +      +  +  +L   + +K  +  AA+ L  G  A+VLP+ +  RF+++++ G
Sbjct:  936 LELLPQIQEALTHLLGDQNDLTQDLASQGMSIVYELG-----------DASMKEQLVHALVNTLSGAAKKKRAIKLMEDSEVFQEGTIGNNPTG-------------GKLSTYKELCSLANEMGQPDLIYKFMDLANYQAAINSKRGAAFGFSKIAK-QAGEA----------------------LQPHLHTLIPRLVRYQYDPDKNIQDSMAHIWKLIVADPKKTIDEHYDLIVEDLLVQSGSRLWRSREASCLALADIIQGRRY----------GQVSKHLRKIWITTFRAMDDIKETVRNAGDSLCRAVSLLTVRLCDVSLTTSSDANETMNIVLPYLLSEGILSKVSSVQKASISLVMKLAKGAGPALKPHLSELVSCMLECLSSLEDQRLNYVEMHAGNAGIQTEKLESLRIAVAKDSPMWETLDICLKVVDKESLDLLVPRLAQMVKSAVGLNTRVGVASFITLLVQKVMVEIKPYAAALLRLLYSAVLEEKSSAAKRAFASSCAAVLKYA-SPSQAQKLIEDTTSLH------LGEKNAQLSAAILIKSYLSNAADIL-SGYNAVVLPVIFASRFDDDKDIG 1459          
BLAST of NO17G00850 vs. NCBI_GenBank
Match: CBX24400.1 (hypothetical_protein [Oryza glaberrima])

HSP 1 Score: 233.0 bits (593), Expect = 2.700e-57
Identity = 169/589 (28.69%), Postives = 283/589 (48.05%), Query Frame = 0
Query:   96 LPRLLQAQAVLVKLLRDKSDLGQEVAGKALGVIYSLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLRGPSATLQPTNLELNVPASLLPPSIPPSLDIGTHNPFRELCSLAAELGQPQLLYHFLALPSTHPAWSGRRASA--YAKLSRGMEGEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVISQYLDVIFEDLLKAAGSRKWRERQAAVAGLANLLPGRTFKEIMGEKEGAGEGGRRLESVWVTAFRAVDDLKESVQLAGIDLAKSLTQLTGRLSNREEAPGEEVKEVVGVVLPLLLTQGLVSKAKEVQAVAVMMLVRMVKGAGECLRPWLAELVSALIEAQSAIEPQQLQYMQFHATSSGMTEEGMEQLRYGLSRSGPLQEALDHCLKELDGPSLTSLLPSLLLHLRSGVGLNTRCCAANVVVVLATRFRLEIKPHLPSLLRVLAAGSLSERSSTAQRFFLSALATVAKIAPEGEEVRKIIIKLTKEYKRVADVVAWRGRRLPVVLALKHLIGAAAEGLEEGAWAIVLPLAYVGRFEEEEEGG 683
            L  L Q Q  L  LL D++DL Q++A + + ++Y L                                     + L   S   Q   +  N                G  + ++ELCSLA E+GQP L+Y F+ L +   A + +R +A  ++K+++   GE                                                                I ++ D+I EDLL  +GSR WR R+A+   LA+++ GR +          G+  + L  +W+T FRA+DD+KE+V+ AG  L ++++ LT RL +       +  E + +VLP LL++G++SK   VQ  ++ +++++ KGAG  L+P L+ELVS ++E  S++E Q+L Y++ HA ++G+  E +E LR  +++  P+ E LD CLK +D  SL  L+P L   ++S VGLNTR   A+ + +L  +  +EIKP+  +LLR+L +  L E+SS A+R F S+ A V K A    + +K+I   T  +      +  +  +L   + +K  +  AA+ L  G  A+VLP+ +  RF+++++ G
Sbjct:  821 LELLPQIQEALTHLLGDQNDLTQDLASQGMSIVYELG-----------DASMKEQLVHALVNTLSGAAKKKRAIKLMEDSEVFQEGTIGNNPTG-------------GKLSTYKELCSLANEMGQPDLIYKFMDLANYQAAINSKRGAAFGFSKIAK-QAGEA----------------------LQPHLHTLIPRLVRYQYDPDKNIQDSMAHIWKLIVADPKKTIDEHYDLIVEDLLVQSGSRLWRSREASCLALADIIQGRRY----------GQVSKHLRKIWITTFRAMDDIKETVRNAGDSLCRAVSLLTVRLCDVSLTTSSDANETMNIVLPYLLSEGILSKVSSVQKASISLVMKLAKGAGPALKPHLSELVSCMLECLSSLEDQRLNYVEMHAGNAGIQTEKLESLRIAVAKDSPMWETLDICLKVVDKESLDLLVPRLAQMVKSAVGLNTRVGVASFITLLVQKVMVEIKPYAATLLRLLYSAVLEEKSSAAKRAFASSCAAVLKYA-SPSQAQKLIEDTTSLH------LGEKNAQLSAAILIKSYLSNAADIL-SGYNAVVLPVIFASRFDDDKDIG 1344          
BLAST of NO17G00850 vs. NCBI_GenBank
Match: XP_010238771.1 (proteasome-associated protein ECM29 homolog isoform X1 [Brachypodium distachyon] >KQJ92416.1 hypothetical protein BRADI_4g43517v3 [Brachypodium distachyon])

HSP 1 Score: 233.0 bits (593), Expect = 2.700e-57
Identity = 148/480 (30.83%), Postives = 254/480 (52.92%), Query Frame = 0
Query:  203 GTHNPFRELCSLAAELGQPQLLYHFLALPSTHPAWSGRRASA--YAKLSRGMEGEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVISQYLDVIFEDLLKAAGSRKWRERQAAVAGLANLLPGRTFKEIMGEKEGAGEGGRRLESVWVTAFRAVDDLKESVQLAGIDLAKSLTQLTGRLSNREEAPGEEVKEVVGVVLPLLLTQGLVSKAKEVQAVAVMMLVRMVKGAGECLRPWLAELVSALIEAQSAIEPQQLQYMQFHATSSGMTEEGMEQLRYGLSRSGPLQEALDHCLKELDGPSLTSLLPSLLLHLRSGVGLNTRCCAANVVVVLATRFRLEIKPHLPSLLRVLAAGSLSERSSTAQRFFLSALATVAKIAPEGEEVRKIIIKLTKEYKRVADVVAWRGRRLPVVLALKHLIGAAAEGLEEGAWAIVLPLAYVGRFEEEEE 681
            G  + ++ELCSLA E+GQP L+Y F+ L +   A + +R +A  ++K+++   GE                                                                I ++ DVI EDLL  +GSR WR R+A+   LA+++ GR + ++           + L  +W T FRA+DD+KE+V+ AG  L ++++ LT RLS+       + KE + +VLP LL++G++SK   VQ  ++ +++++ KGAG  LRP L+ELVS ++E  S++E Q+L Y++ HA ++G+  E ++ LR  +++  P+ E LD C+K +D  SL  L+P L   +RS VGLNTR   A+ + +L  +  + IKP+   LL++L +  L ERS+ A+R F S+ A V K A +  + +K+I   +  +      +  +  +L   + +K  +  AA+ +  G  A+V+P+ +  RF++++E
Sbjct: 1022 GKLSTYKELCSLANEMGQPDLIYKFMDLANYQAALNSKRGAAFGFSKIAK-QAGEA----------------------LQPHLHTLIPRLVRYQYDPDKNIQDSMGHIWKLIVSDPKKAIDEHYDVIVEDLLVQSGSRLWRSREASCLALADIIQGRRYSQV----------SKHLRKIWTTTFRAMDDIKETVRNAGDSLCRAVSSLTIRLSDVSLTAATDAKETMNIVLPYLLSEGILSKVSSVQKASISLVMKLAKGAGTALRPHLSELVSCMLECLSSLEDQRLNYVEMHAGNAGIQTEKLDSLRVAVAKDSPMWETLDICIKVVDTDSLDLLIPRLAQMVRSAVGLNTRVGVASFITLLVQKVMINIKPYTAMLLKLLYSAVLEERSTAAKRAFASSCAAVLKYASQ-SQAQKLIEDTSSLH------LGEKNAQLSGAVLIKSYLSNAADVI-SGYNAVVIPVIFSSRFDDDKE 1460          
BLAST of NO17G00850 vs. NCBI_GenBank
Match: XP_014758077.1 (proteasome-associated protein ECM29 homolog isoform X2 [Brachypodium distachyon] >KQJ92417.1 hypothetical protein BRADI_4g43517v3 [Brachypodium distachyon])

HSP 1 Score: 233.0 bits (593), Expect = 2.700e-57
Identity = 148/480 (30.83%), Postives = 254/480 (52.92%), Query Frame = 0
Query:  203 GTHNPFRELCSLAAELGQPQLLYHFLALPSTHPAWSGRRASA--YAKLSRGMEGEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVISQYLDVIFEDLLKAAGSRKWRERQAAVAGLANLLPGRTFKEIMGEKEGAGEGGRRLESVWVTAFRAVDDLKESVQLAGIDLAKSLTQLTGRLSNREEAPGEEVKEVVGVVLPLLLTQGLVSKAKEVQAVAVMMLVRMVKGAGECLRPWLAELVSALIEAQSAIEPQQLQYMQFHATSSGMTEEGMEQLRYGLSRSGPLQEALDHCLKELDGPSLTSLLPSLLLHLRSGVGLNTRCCAANVVVVLATRFRLEIKPHLPSLLRVLAAGSLSERSSTAQRFFLSALATVAKIAPEGEEVRKIIIKLTKEYKRVADVVAWRGRRLPVVLALKHLIGAAAEGLEEGAWAIVLPLAYVGRFEEEEE 681
            G  + ++ELCSLA E+GQP L+Y F+ L +   A + +R +A  ++K+++   GE                                                                I ++ DVI EDLL  +GSR WR R+A+   LA+++ GR + ++           + L  +W T FRA+DD+KE+V+ AG  L ++++ LT RLS+       + KE + +VLP LL++G++SK   VQ  ++ +++++ KGAG  LRP L+ELVS ++E  S++E Q+L Y++ HA ++G+  E ++ LR  +++  P+ E LD C+K +D  SL  L+P L   +RS VGLNTR   A+ + +L  +  + IKP+   LL++L +  L ERS+ A+R F S+ A V K A +  + +K+I   +  +      +  +  +L   + +K  +  AA+ +  G  A+V+P+ +  RF++++E
Sbjct: 1022 GKLSTYKELCSLANEMGQPDLIYKFMDLANYQAALNSKRGAAFGFSKIAK-QAGEA----------------------LQPHLHTLIPRLVRYQYDPDKNIQDSMGHIWKLIVSDPKKAIDEHYDVIVEDLLVQSGSRLWRSREASCLALADIIQGRRYSQV----------SKHLRKIWTTTFRAMDDIKETVRNAGDSLCRAVSSLTIRLSDVSLTAATDAKETMNIVLPYLLSEGILSKVSSVQKASISLVMKLAKGAGTALRPHLSELVSCMLECLSSLEDQRLNYVEMHAGNAGIQTEKLDSLRVAVAKDSPMWETLDICIKVVDTDSLDLLIPRLAQMVRSAVGLNTRVGVASFITLLVQKVMINIKPYTAMLLKLLYSAVLEERSTAAKRAFASSCAAVLKYASQ-SQAQKLIEDTSSLH------LGEKNAQLSGAVLIKSYLSNAADVI-SGYNAVVIPVIFSSRFDDDKE 1460          
BLAST of NO17G00850 vs. NCBI_GenBank
Match: XP_014758078.1 (proteasome-associated protein ECM29 homolog isoform X3 [Brachypodium distachyon])

HSP 1 Score: 233.0 bits (593), Expect = 2.700e-57
Identity = 148/480 (30.83%), Postives = 254/480 (52.92%), Query Frame = 0
Query:  203 GTHNPFRELCSLAAELGQPQLLYHFLALPSTHPAWSGRRASA--YAKLSRGMEGEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVISQYLDVIFEDLLKAAGSRKWRERQAAVAGLANLLPGRTFKEIMGEKEGAGEGGRRLESVWVTAFRAVDDLKESVQLAGIDLAKSLTQLTGRLSNREEAPGEEVKEVVGVVLPLLLTQGLVSKAKEVQAVAVMMLVRMVKGAGECLRPWLAELVSALIEAQSAIEPQQLQYMQFHATSSGMTEEGMEQLRYGLSRSGPLQEALDHCLKELDGPSLTSLLPSLLLHLRSGVGLNTRCCAANVVVVLATRFRLEIKPHLPSLLRVLAAGSLSERSSTAQRFFLSALATVAKIAPEGEEVRKIIIKLTKEYKRVADVVAWRGRRLPVVLALKHLIGAAAEGLEEGAWAIVLPLAYVGRFEEEEE 681
            G  + ++ELCSLA E+GQP L+Y F+ L +   A + +R +A  ++K+++   GE                                                                I ++ DVI EDLL  +GSR WR R+A+   LA+++ GR + ++           + L  +W T FRA+DD+KE+V+ AG  L ++++ LT RLS+       + KE + +VLP LL++G++SK   VQ  ++ +++++ KGAG  LRP L+ELVS ++E  S++E Q+L Y++ HA ++G+  E ++ LR  +++  P+ E LD C+K +D  SL  L+P L   +RS VGLNTR   A+ + +L  +  + IKP+   LL++L +  L ERS+ A+R F S+ A V K A +  + +K+I   +  +      +  +  +L   + +K  +  AA+ +  G  A+V+P+ +  RF++++E
Sbjct:  787 GKLSTYKELCSLANEMGQPDLIYKFMDLANYQAALNSKRGAAFGFSKIAK-QAGEA----------------------LQPHLHTLIPRLVRYQYDPDKNIQDSMGHIWKLIVSDPKKAIDEHYDVIVEDLLVQSGSRLWRSREASCLALADIIQGRRYSQV----------SKHLRKIWTTTFRAMDDIKETVRNAGDSLCRAVSSLTIRLSDVSLTAATDAKETMNIVLPYLLSEGILSKVSSVQKASISLVMKLAKGAGTALRPHLSELVSCMLECLSSLEDQRLNYVEMHAGNAGIQTEKLDSLRVAVAKDSPMWETLDICIKVVDTDSLDLLIPRLAQMVRSAVGLNTRVGVASFITLLVQKVMINIKPYTAMLLKLLYSAVLEERSTAAKRAFASSCAAVLKYASQ-SQAQKLIEDTSSLH------LGEKNAQLSGAVLIKSYLSNAADVI-SGYNAVVIPVIFSSRFDDDKE 1225          
The following BLAST results are available for this feature:
BLAST of NO17G00850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21118.17.200e-17562.66proteasome-associated protein ecm29 [Nannochlorops... [more]
XP_005854431.16.900e-7768.05proteasome component ecm29, partial [Nannochlorops... [more]
PNR62850.11.200e-6031.17hypothetical protein PHYPA_001274 [Physcomitrella ... [more]
XP_024395125.11.200e-6031.17LOW QUALITY PROTEIN: proteasome-associated protein... [more]
PIA53838.15.500e-5831.11hypothetical protein AQUCO_00900435v1 [Aquilegia c... [more]
XP_015617073.12.700e-5728.69PREDICTED: proteasome-associated protein ECM29 hom... [more]
CBX24400.12.700e-5728.69hypothetical_protein [Oryza glaberrima][more]
XP_010238771.12.700e-5730.83proteasome-associated protein ECM29 homolog isofor... [more]
XP_014758077.12.700e-5730.83proteasome-associated protein ECM29 homolog isofor... [more]
XP_014758078.12.700e-5730.83proteasome-associated protein ECM29 homolog isofor... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL158nonsL158Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR084ngnoR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G00850.1NO17G00850.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632519gene_7799Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100041g1gene9283Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G00850.1NO17G00850.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G00850 ID=NO17G00850|Name=NO17G00850|organism=Nannochloropsis oceanica|type=gene|length=2305bp
ATGGCACTGGTGTGGGGGGGGTGGGGGGAGGGAGGGGAGGAGGGCGAGAA
GGAGGGAGGAGGGGAAGAGTTTGAGACGGTATGGAGGGGCGTGGTGGAGG
ACAAGGTGGAGAACAACAGTCCGCATGTCCGAGCGGCGGCGACGGTGTGG
ATGATGGTCTTGCTCTCCGAAGTAGCAGCAGCAGCCGCATCACCACCCCC
ACCCCCGATAACACCACCACCACTCACCACTACTGCTCCTGCTCCTGCTC
CTGCTGCGGCTGTGGCTGCACGGTCTCTTCTCCCCCTCCCTCGGCTCCTG
CAAGCCCAAGCCGTCCTCGTCAAGCTCCTGAGAGACAAATCAGATCTGGG
TCAGGAAGTCGCCGGGAAGGCTCTTGGAGTGATCTACAGCCTCGCGTCTT
CCCTCTCTTCCTCCTCCTCCGCTTCCTCTTCCTCCACCACCCCCTCCTCC
CTTTTGCCCTCTTCCTCGAATGAAATCCTCAGCACCTTGACCAGCGCTCT
TGTCCTCCTCCTCCGCGGCCCCTCGGCCACCCTCCAACCCACCAACCTCG
AGCTCAATGTCCCTGCCTCTCTCCTCCCTCCCTCTATCCCCCCCTCCCTC
GACATTGGCACGCACAACCCGTTCCGAGAGTTGTGCTCCTTGGCAGCGGA
GCTAGGGCAACCGCAGCTCCTCTACCATTTCCTCGCCCTCCCCTCGACTC
ACCCGGCTTGGTCAGGCCGACGGGCGTCCGCGTATGCGAAGCTGTCAAGA
GGGATGGAGGGAGAGGGAGGGGGGGAGGAAGGGCTGCAGGGTGCACTGAT
GCCCTTACTTCCTCGATTGGTGCCCAGGCTCTACAGGGCGAGGTTCGAGC
CGACACAGGCCGTCAGACAAGCGATGGAGCCGGTATGGAGATCGGTAATA
GCTGCAGCAGCAGCAGATAGGGCAGGGGAGGGAGGGAGGGAGGGAGGGAA
GATGGTGATAAGTCAATATCTGGATGTGATTTTTGAAGATCTGTTGAAGG
CGGCGGGAAGTAGGAAATGGAGGGAAAGACAGGCAGCAGTTGCAGGGCTT
GCGAATTTACTACCAGGGAGGACGTTCAAGGAAATAATGGGGGAGAAGGA
GGGGGCGGGGGAGGGAGGAAGGAGGTTGGAGAGTGTGTGGGTCACGGCGT
TTAGAGCGGTGGACGATTTGAAGGAGAGTGTGCAGCTGGCAGGGATTGAC
CTGGCAAAGAGCCTGACGCAGCTGACGGGGAGGTTAAGCAATCGGGAGGA
GGCGCCGGGGGAGGAAGTGAAGGAGGTCGTGGGGGTGGTGTTGCCCTTGT
TGTTGACGCAGGGATTGGTGAGTAAGGCGAAAGAGGTGCAGGCTGTGGCG
GTGATGATGCTCGTCCGAATGGTGAAGGGAGCGGGGGAGTGTCTGAGGCC
TTGGCTTGCGGAGCTGGTGAGTGCCCTGATTGAGGCGCAAAGTGCCATCG
AGCCACAGCAGCTGCAGTACATGCAGTTTCACGCCACCAGCAGTGGGATG
ACGGAGGAGGGGATGGAAgtgagtaatcagacagccctttcttccctctc
tccctgctcacgccttcttcccctacctccctgcctccctccccttctta
atagcaactccgctgcggcctttgcccctcgcaccttgtccacacccttc
ttctattcccggggggtcagcttgaactcacgtcgtcacactcactcacc
atccctccctcctttctccccctttccccctccctccttccccttcttct
ccgcagCAACTCCGCTACGGACTCTCCCGCTCGGGTCCCCTCCAAGAAGC
CCTCGATCACTGCCTCAAAGAACTCGACGGCCCATCGCTCACCTCCCTCC
TTCCCTCCCTCCTCCTCCATCTTCGTTCGGGAGTTGGCCTCAACACACGC
TGTTGCGCGGCCAACGTCGTCGTCGTTCTTGCCACCCGCTTCCGTCTTGA
AATCAAACCGCACCTTCCCTCCCTTCTTCGTGTTCTGGCTGCGGGGTCCT
TGTCCGAACGCAGTAGTACTGCCCAACGATTTTTCCTCTCGGCTCTCGCA
ACCGTTGCCAAGATTGCCCCTGAAGGAGAGGAAGTTCGGAAAATTATTAT
AAAATTAACCAAGGAGTATAAACGCGTCGCGGATGTGGTAGCATGGAGGG
GGAGAAGGCTGCCGGTGGTGCTTGCCCTGAAGCACTTGATAGGGGCCGCA
GCGGAGGGTTTGGAGGAAGGAGCATGGGCGATTGTATTGCCTCTTGCGTA
TGTGGGGCGGTTTGAAGAGGAGGAGGAGGGGGGGGAGGGAGGGACGGAGG
GGTGA
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protein sequence of NO17G00850.1

>NO17G00850.1-protein ID=NO17G00850.1-protein|Name=NO17G00850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=689bp
MALVWGGWGEGGEEGEKEGGGEEFETVWRGVVEDKVENNSPHVRAAATVW
MMVLLSEVAAAAASPPPPPITPPPLTTTAPAPAPAAAVAARSLLPLPRLL
QAQAVLVKLLRDKSDLGQEVAGKALGVIYSLASSLSSSSSASSSSTTPSS
LLPSSSNEILSTLTSALVLLLRGPSATLQPTNLELNVPASLLPPSIPPSL
DIGTHNPFRELCSLAAELGQPQLLYHFLALPSTHPAWSGRRASAYAKLSR
GMEGEGGGEEGLQGALMPLLPRLVPRLYRARFEPTQAVRQAMEPVWRSVI
AAAAADRAGEGGREGGKMVISQYLDVIFEDLLKAAGSRKWRERQAAVAGL
ANLLPGRTFKEIMGEKEGAGEGGRRLESVWVTAFRAVDDLKESVQLAGID
LAKSLTQLTGRLSNREEAPGEEVKEVVGVVLPLLLTQGLVSKAKEVQAVA
VMMLVRMVKGAGECLRPWLAELVSALIEAQSAIEPQQLQYMQFHATSSGM
TEEGMEQLRYGLSRSGPLQEALDHCLKELDGPSLTSLLPSLLLHLRSGVG
LNTRCCAANVVVVLATRFRLEIKPHLPSLLRVLAAGSLSERSSTAQRFFL
SALATVAKIAPEGEEVRKIIIKLTKEYKRVADVVAWRGRRLPVVLALKHL
IGAAAEGLEEGAWAIVLPLAYVGRFEEEEEGGEGGTEG*
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Synonyms
Publications