jgi.p|Nanoce1779_2|632519, gene_7799 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|632519
Unique Namegene_7799
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_21:359803..365923 -

Link to JBrowse

Properties
Property NameValue
TranscriptId632605
ProteinId632519
Product nameArmadillo-type fold
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_21supercontigscaffold_21:359803..365923 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL035ncniL035Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G00850NO17G00850Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632519mRNA_7799-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632519mRNA_7799Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|632519

>mRNA_7799-protein ID=mRNA_7799-protein|Name=jgi.p|Nanoce1779_2|632519|organism=Nannochloropsis oceanica|type=polypeptide|length=1148bp
MALVWRGVVEDKVENNSPHVRAAATVWMMVLLSEVAAAAASPPPPPITPP
PLTTTAPAPAPAAAVAARSLLPLPRLLQAQAVLVKLLRDKSDLGQEVAGK
ALGVIYSLASSLSSSSSASSSSTTPSSLLPSSSNEILSTLTSALVLLLRG
PSATLQPTNLELNVPASLLPPSIPPSLDIGTHNPFRELCSLAAELGQPQL
LYHFLALPSTHPAWSGRRASAYAKLSRGMEGEGGGEEGLQGALMPLLPRL
VPRLYRARFEPTQAVRQAMEPVWRSVIAAAAADRAGEGGREGGKMVISQY
LDVIFEDLLKAAGSRKWRERQAAVAGLANLLPGRTFKEIMGEKEGAGEGG
RRLESVWVTAFRAVDDLKESVQLAGIDLAKSLTQLTGRLSNREEAPGEEV
KEVVGVVLPLLLTQGLVSKAKEVQAVAVMMLVRMVKGAGECLRPWLAELV
SALIEAQSAIEPQQLQYMQFHATSSGMTEEGMEQLRYGLSRSGPLQEALD
HCLKELDGPSLTSLLPSLLLHLRSGVGLNTRCCAANVVVVLATRFRLEIK
PHLPSLLRVLAAGSLSERSSTAQRFFLSALATVAKIAPEGEEVRKIIIKL
TKEYKRVADVVAWRGRRLPVVLALKHLIGAAAEGLEEGAWAIVLPLAYVG
RFEEEEEGGGGRDGGVKPAWEEIWMEGCVALGKGGGNTARVLGIELCMEV
EKGLRSSSWGGRRAALLALVDLTGSLGKGGLKEHAFKMLSNLFEMVPGRL
WEGKESVLKALVQVVGVCPEILMEGGGEEGWLWWEEGGDGGEDFFWFPAG
LLRSGEGGEMVVVVMEEEEREKEGEGGGEGGAVTEGPAVEGEGTEQRDEN
AFARNSSTNPNTNTDTGTRKLSYRGLVRVLVEQCHRSHRDYRRAAVQCLM
DLAVALPQFNVLEMTQETLIKMAGGIELMSGGGGGERGEGREGVEGGEVD
HVLRAWAVEALGTFFPSCVVATAAIAATAGAAPTAEAYNVSVYNTQKDAL
GWLLRMLLSRATYSVWSLRRAVYKALRLIMQRIYVRPDADSRTDTCISTP
AQQQQRLPPSLLTGATIEKVISASLKGIEDAKYHQIREVATDVLLSLIKR
PEMEVRVALIPQSERMAMTLEKVVMDSNPGVVRLAMEAKALLHGLGG*
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Synonyms
Publications