NO17G00790, NO17G00790 (gene) Nannochloropsis oceanica

Overview
NameNO17G00790
Unique NameNO17G00790
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1648
Alignment locationchr17:266761..268408 -

Link to JBrowse

Properties
Property NameValue
Description4alpha-methyl-sterol C4-methyl-oxidase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:266761..268408 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008610lipid biosynthetic process
GO:0055114oxidation-reduction process
GO:0055114oxidation-reduction process
GO:0008610lipid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO:0016491oxidoreductase activity
GO:0016491oxidoreductase activity
GO:0005506iron ion binding
Vocabulary: INTERPRO
TermDefinition
IPR006694Fatty_acid_hydroxylase
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO17G00790 vs. NCBI_GenBank
Match: XP_004352512.1 (4alpha-methyl-sterol C4-methyl-oxidase [Acanthamoeba castellanii str. Neff] >ELR23035.1 4alpha-methyl-sterol C4-methyl-oxidase [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 173.3 bits (438), Expect = 1.500e-39
Identity = 92/241 (38.17%), Postives = 137/241 (56.85%), Query Frame = 0
Query:    7 LWLSLIQGLGLSERLTFLLGVYLVSELWYLFVAGFYYLCWAQDWFLRYRIQKRAT---------------MPDNALIKKCLEEVCVRSALGRLPFLFILFDAFKYMGMEV-FAPLPPWPTVLKHWVLALAINDTLFYWTHRLMHHRLLYKHFHKKHHEFRVNISVNSEYAGLVEVAMCDVLPTLAGCLLLGSHLLVMLGWTSFRVWETCAAHSGYAFPWCPFTQLPFFNGPQMHDYHHSHN 232
            +W S++ GLGL ER  F LG ++V E  ++ +    +LC  + W  R++IQ   +                P   L+++C+  +CV   + ++P L++++ AFKY GM    A LP    + +H  + + INDT FYW HRLMH +  Y+  H +HH F   I + SE+A  VE  + + LPT+ G +L+GSHLL    W   R+ ET  AHSGY+ P  PF+ +PF NG  +HD+HHSHN
Sbjct:    4 IWGSIL-GLGLPERWLFALGTFVVHEAAFVPLNAILFLCHHRGWLNRFKIQVGGSPSSTSKASSHSPGHPFPKARLVRECIFSLCVNHLVLQIPTLYLVYPAFKYFGMRSDIASLPDAWEMARHIAIFILINDTGFYWMHRLMHTKWFYRSIHARHHRFTAPIGIASEFAHPVEQVLANQLPTILGAMLMGSHLLTFWVWLFLRIVETIEAHSGYSLPLSPFSLVPFMNGADVHDFHHSHN 243          
BLAST of NO17G00790 vs. NCBI_GenBank
Match: XP_004992472.1 (hypothetical protein PTSG_07059 [Salpingoeca rosetta] >EGD74827.1 hypothetical protein PTSG_07059 [Salpingoeca rosetta])

HSP 1 Score: 167.2 bits (422), Expect = 1.000e-37
Identity = 101/265 (38.11%), Postives = 147/265 (55.47%), Query Frame = 0
Query:   10 SLIQGLGLSERL----TFLLGVYLVSELWYLFVAGFYYLCWAQDWFLRYRIQKRATMPDNA--LIKKCL---EEVCVRSALGRLPFLFILFDAFKYMGMEVFAPLPPWPTVLKHWVLALAINDTLFYWTHRLMHHRLLYKHFHKKHHEFRVNISVNSEYAGLVEVAMCDVLPTLAGCLLLGSHLLVMLGWTSFRVWETCAAHSGYAFPWCPFTQ-LPFFNGPQMHDYHHSHNVGAYGAVTRFWDAWIGTDGHYHEHARRHPDPCI 265
            +++   G  ERL     FLLG      L  L  A FYY     D F   RI +   +   +   I+K L     V + S +G    ++ L+D +K+ GM++ APLP +   L +  ++L + DTLFYW HR++HH  +YKH HK+HH+F   + + + YA  +E  + + +PT +GCL+ G  L VM+ W+  R+WET  AHSGYAF W P+   L    G + HD+HH  N G+YG+ T+FWD   GTD  Y++  RR   P I
Sbjct:   11 TVLDWCGGDERLLFTVLFLLGSAGTFYLVNLVFAVFYYF----DLFPNKRIPRPLGIKPESPQTIRKALIHVNAVILSSPIG----MYFLYDLYKWRGMDMTAPLPGFWKTLGYLAVSLVVEDTLFYWGHRILHHPSIYKHIHKQHHQFHACVGIAALYAHPIEEVVANFIPTYSGCLISGCPLSVMVLWSFLRLWETVDAHSGYAFDWSPWNLFLTIQGGAERHDFHHFQNKGSYGSFTKFWDWVCGTDEPYYQW-RREKKPAI 266          
BLAST of NO17G00790 vs. NCBI_GenBank
Match: XP_008803120.1 (PREDICTED: methylsterol monooxygenase 2-1-like [Phoenix dactylifera])

HSP 1 Score: 152.5 bits (384), Expect = 2.700e-33
Identity = 87/237 (36.71%), Postives = 124/237 (52.32%), Query Frame = 0
Query:   25 LGVYLVSELWYLFVAGFYYLCWAQ-DWFLRYRIQKRATMPD---NALIKKCLEEVCVRSALGRLPFLFILFDAFKYMGMEVFAPLPPWPTVLKHWVLALAINDTLFYWTHRLMHHRLLYKHFHKKHHEFRVNISVNSEYAGLVEVAMCDVLPTLAGCLLLGSHLLVMLGWTSFRVWETCAAHSGYAFPWCPFTQLPFFNGPQMHDYHHS---HNVGAYGAVTRFWDAWIGTDGHYHE 255
            LG ++V E  + F++G   LC+ +   F +Y+IQK++  PD     +++  L  VCV      LP + + + AF+YMG+    PLPPW  +L   +    + D +FYW HR++H + LYKH H  HHE+     + SEYA   E+       T+ G  L G H+L +  W   RV ET  AHSGY FPW P   LP + G + HDYHH       G Y +   + D   GTD  Y +
Sbjct:   26 LGTFIVHESVF-FLSGLPSLCFERAGLFNQYKIQKKSNTPDAQGKCVMRLILYHVCV-----NLPVMIVSYPAFRYMGLRSSLPLPPWSVILSQILFYFILEDFVFYWGHRVLHTKWLYKHVHSIHHEYATPFGLTSEYAHPAEILFLG-FATIIGPALTGPHMLTLWLWVILRVLETVEAHSGYHFPWSPAKFLPLYGGAEFHDYHHRVLYTKSGNYSSTFIYMDWLFGTDKGYRK 255          
BLAST of NO17G00790 vs. NCBI_GenBank
Match: XP_020273644.1 (methylsterol monooxygenase 2-2-like [Asparagus officinalis] >ONK62189.1 uncharacterized protein A4U43_C07F1300 [Asparagus officinalis])

HSP 1 Score: 151.8 bits (382), Expect = 4.500e-33
Identity = 78/205 (38.05%), Postives = 108/205 (52.68%), Query Frame = 0
Query:   51 FLRYRIQKRATMPDNALIKKCLEEVCVRSALGRLPFLFILFDAFKYMGMEVFAPLPPWPTVLKHWVLALAINDTLFYWTHRLMHHRLLYKHFHKKHHEFRVNISVNSEYAGLVEVAMCDVLPTLAGCLLLGSHLLVMLGWTSFRVWETCAAHSGYAFPWCPFTQLPFFNGPQMHDYHHS---HNVGAYGAVTRFWDAWIGTDGHY 253
            F  Y+IQK+   P  A   +C+ ++ +      LP + + + AF+YMG++   PLPPWP VL   +    + D +FYW HR++H + LY+H H  HHE+     + SEYA   E+ M     T+ G  L G HL  +  W S RV ET  AHSGY FPW P   LP + G + HD+HH       G Y +   + D   GTD  Y
Sbjct:   50 FSEYKIQKKVNTP--AAQWRCIVKLVLYHVFVNLPIMVLSYPAFRYMGLKSSLPLPPWPVVLSQVIFYFILEDFVFYWGHRMLHTKWLYQHVHSVHHEYATPFGLTSEYAHPAEILMLG-FGTVLGPALTGPHLFTLWLWMSLRVIETVEAHSGYDFPWSPSKFLPLYGGAEFHDFHHRVLYTQSGNYSSTFTYMDWLFGTDRDY 251          
BLAST of NO17G00790 vs. NCBI_GenBank
Match: XP_020101158.1 (methylsterol monooxygenase 2-1-like [Ananas comosus])

HSP 1 Score: 151.8 bits (382), Expect = 4.500e-33
Identity = 91/261 (34.87%), Postives = 132/261 (50.57%), Query Frame = 0
Query:    1 MDAISRLWLSLIQGLGLSERLTFLLGVYLVSELWYLFVAGFYYLCWAQD-WFLRYRIQKRATMP---DNALIKKCLEEVCVRSALGRLPFLFILFDAFKYMGMEVFAPLPPWPTVLKHWVLALAINDTLFYWTHRLMHHRLLYKHFHKKHHEFRVNISVNSEYAGLVEVAMCDVLPTLAGCLLLGSHLLVMLGWTSFRVWETCAAHSGYAFPWCPFTQLPFFNGPQMHDYHHS---HNVGAYGAVTRFWDAWIGTDGHYHE 255
            ++ +  +W  LI     SE     LG +++ E  + F++G   L + +   F +Y+IQK+A  P   D  +++  L  +CV      LP + + + AFK+MG++   PLPPW  VL   +    + D +FYW HR++H + LY+H H  HHE+     + SEYA   E+       T+ G  L G HLL +  W   RV ET  AHSGY FPW P   LP + G   HDYHH       G Y +   + D   GTD  Y +
Sbjct:    3 LNLLESVWQYLI--TNFSEFQLATLGTFIIHESVF-FLSGLPSLLFERSGLFSKYKIQKKANTPASQDKCVLRLILYHICV-----NLPLMIVSYPAFKFMGLKSSVPLPPWTVVLSQILFYFILEDFVFYWGHRILHTKWLYQHIHSIHHEYATPFGLTSEYAHPAEILFLG-FATVVGPALTGPHLLTLWLWVVLRVLETVEAHSGYHFPWSPSNFLPLYGGADFHDYHHRLLYTKSGNYSSTFVYMDWLFGTDKGYRK 254          
BLAST of NO17G00790 vs. NCBI_GenBank
Match: XP_010937561.1 (PREDICTED: methylsterol monooxygenase 2-1 [Elaeis guineensis])

HSP 1 Score: 151.0 bits (380), Expect = 7.800e-33
Identity = 84/234 (35.90%), Postives = 120/234 (51.28%), Query Frame = 0
Query:   25 LGVYLVSELWYLFVAGFYYLCWAQ-DWFLRYRIQKRATMPDNALIKKCLEEVCVRSALGRLPFLFILFDAFKYMGMEVFAPLPPWPTVLKHWVLALAINDTLFYWTHRLMHHRLLYKHFHKKHHEFRVNISVNSEYAGLVEVAMCDVLPTLAGCLLLGSHLLVMLGWTSFRVWETCAAHSGYAFPWCPFTQLPFFNGPQMHDYHHS---HNVGAYGAVTRFWDAWIGTDGHYHE 255
            LG +++ E  + F++G   LC+ + D F +Y+IQK+   PD     KC+  + +      LP + + + AF+YMG+    PLP W  +L   +    + D +FYW HR++H + LYKH H  HHE+     + SEYA   E+       T+ G  L G HL  +  W   RV ET  AHSGY FPW P   LP + G + HDYHH       G Y +   + D   GTD  Y +
Sbjct:   26 LGTFIIHESVF-FLSGLPSLCFERADLFNKYKIQKKCNTPDAQ--GKCIMRLILYHFCVNLPVMIVSYPAFRYMGLRSSLPLPSWSVILSQILFYFILEDFVFYWGHRVLHTKWLYKHVHSIHHEYATPFGLTSEYAHPAEILFLG-FATIIGPALTGPHLFTLWLWVILRVLETVEAHSGYHFPWSPAKFLPLYGGAEFHDYHHRVLYTKSGNYSSTFIYMDWLFGTDKGYRK 255          
BLAST of NO17G00790 vs. NCBI_GenBank
Match: GAQ91192.1 (sterol 4-alpha-methyl-oxidase 2 [Klebsormidium nitens])

HSP 1 Score: 149.8 bits (377), Expect = 1.700e-32
Identity = 91/256 (35.55%), Postives = 125/256 (48.83%), Query Frame = 0
Query:    2 DAISRLWLSLIQGLGLSERLTFLLGVYLVSELWYLFVAGFYYLCWAQDWFLRYRIQKRATMPDNALIKKCLEEVCVRSALGRLPFLFILFDAFKYMGMEVFAPLPPWPTVLKHWVLALAINDTLFYWTHRLMHHRLLYKHFHKKHHEFRVNISVNSEYAGLVEVAMCDVLPTLAGCLLLGSHLLVMLGWTSFRVWETCAAHSGYAFPWCPFTQLPFFNGPQMHDYHHS---HNVGAYGAVTRFWDAWIGTDGHYHE 255
            +A    WL L      +E     +G +L+ E  Y F++G  +L        +Y+IQK+     +A  +KCL+++        LP + + +  FKYMG     PLP W T+     L   I D +FYW HRL+H +LLYK+ H  HHE+     + SEYA  +E+       T+AG  L G HLL +  W S RV ET  AH GY FPW P    P + G   HDYHH       G Y +   + D   GTD  Y +
Sbjct:    6 NAFESAWLMLTD--NFTEFQLASIGSFLIHESVY-FLSGIPFLLMEMYNIRKYKIQKKVN--TSAAQQKCLKKLMFYHFCVNLPVMMLSYPVFKYMGFTTALPLPSWKTIGGQLFLYFIIEDFIFYWGHRLLHTKLLYKYIHSVHHEYATPFGLTSEYAHPLEILFLG-FATIAGPALTGPHLLTLWLWMSVRVLETVEAHCGYEFPWSPSKFFPIYGGADFHDYHHRCLYTKSGNYSSTFTYMDHLFGTDVGYRK 255          
BLAST of NO17G00790 vs. NCBI_GenBank
Match: OAY74156.1 (Methylsterol monooxygenase 2-1, partial [Ananas comosus])

HSP 1 Score: 149.8 bits (377), Expect = 1.700e-32
Identity = 86/235 (36.60%), Postives = 122/235 (51.91%), Query Frame = 0
Query:   25 LGVYLVSELWYLFVAGFYYLCWAQD-WFLRYRIQKRATMP---DNALIKKCLEEVCVRSALGRLPFLFILFDAFKYMGMEVFAPLPPWPTVLKHWVLALAINDTLFYWTHRLMHHRLLYKHFHKKHHEFRVNISVNSEYAGLVEVAMCDVLPTLAGCLLLGSHLLVMLGWTSFRVWETCAAHSGYAFPWCPFTQLPFFNGPQMHDYHHS---HNVGAYGAVTRFWDAWIGTDGHY 253
            LG +++ E  + F++G   L + +   F +Y+IQK+A  P   D  +++  L  +CV      LP + + + AFK+MG++   PLPPW  VL   +    + D +FYW HR++H + LY+H H  HHE+     + SEYA   E+       T+ G  L G HLL +  W   RV ET  AHSGY FPW P   LP + G   HDYHH       G Y +   + D   GTD  Y
Sbjct:   66 LGTFIIHESVF-FLSGLPSLLFERSGLFSKYKIQKKANTPASQDKCVLRLILYHICV-----NLPLMIVSYPAFKFMGLKSSVPLPPWTVVLCQILFYFILEDFVFYWGHRILHTKWLYQHIHSIHHEYATPFGLTSEYAHPAEILFLG-FATVVGPALTGPHLLTLWLWVVLRVLETVEAHSGYHFPWSPSNFLPLYGGADFHDYHHRLLYTKSGNYSSTFVYMDWLFGTDKGY 293          
BLAST of NO17G00790 vs. NCBI_GenBank
Match: XP_004240377.1 (PREDICTED: methylsterol monooxygenase 2-2 isoform X2 [Solanum lycopersicum] >XP_015079686.1 PREDICTED: methylsterol monooxygenase 2-2-like [Solanum pennellii])

HSP 1 Score: 149.4 bits (376), Expect = 2.300e-32
Identity = 82/234 (35.04%), Postives = 120/234 (51.28%), Query Frame = 0
Query:   25 LGVYLVSELWYLFVAGFYYLCWAQ-DWFLRYRIQKRATMPDNALIKKCLEEVCVRSALGRLPFLFILFDAFKYMGMEVFAPLPPWPTVLKHWVLALAINDTLFYWTHRLMHHRLLYKHFHKKHHEFRVNISVNSEYAGLVEVAMCDVLPTLAGCLLLGSHLLVMLGWTSFRVWETCAAHSGYAFPWCPFTQLPFFNGPQMHDYHHS---HNVGAYGAVTRFWDAWIGTDGHYHE 255
            LG ++V E  + F++G  ++ + +  WF +Y+IQK+   P+    +KC+  + +      LP L + +  FK+MGM    PLP W  V    +    + D +FYW HR++H + LYKH H  HHE+     + SEYA   E+       T+ G  + G HL+ +  W S R+ ET  AHSGY FPW P   LP + G   HDYHH       G Y +   + D   GTD  Y +
Sbjct:   24 LGGFIVHESAF-FLSGIPFILFEKAGWFGKYKIQKKTNTPEAQ--QKCITRLLIFHFCVNLPILIVTYPLFKFMGMRSTLPLPSWKVVSTQVLFYFILEDFVFYWGHRVLHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLG-FATVIGPAITGPHLITLYLWISLRILETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRLLYTKSGNYSSTFVYMDWLFGTDKGYRK 253          
BLAST of NO17G00790 vs. NCBI_GenBank
Match: XP_008801626.1 (PREDICTED: methylsterol monooxygenase 2-2-like isoform X1 [Phoenix dactylifera])

HSP 1 Score: 149.4 bits (376), Expect = 2.300e-32
Identity = 85/241 (35.27%), Postives = 123/241 (51.04%), Query Frame = 0
Query:   18 SERLTFLLGVYLVSELWYLFVAGFYYLCWAQ-DWFLRYRIQKRATMPDNALIKKCLEEVCVRSALGRLPFLFILFDAFKYMGMEVFAPLPPWPTVLKHWVLALAINDTLFYWTHRLMHHRLLYKHFHKKHHEFRVNISVNSEYAGLVEVAMCDVLPTLAGCLLLGSHLLVMLGWTSFRVWETCAAHSGYAFPWCPFTQLPFFNGPQMHDYHHS---HNVGAYGAVTRFWDAWIGTDGHYHE 255
            SE    +LG +++ E  + F++G   +C+ +   F +Y+IQ+++  PD  +  KC+  +        LP + + + AF+YMG+    PLPPW  VL   +    + D +FYW HR++H + LYKH H  HHE      + SEYA   E+       T+ G  L G HLL +  W   RV ET   HSGY FPW P   LP + G + HDYHH       G Y +   + D   GTD  Y +
Sbjct:   19 SEFQLSILGTFIIHESVF-FLSGLPSVCFERAGLFSKYKIQRKSNTPD--VHGKCIMRLIFYHVFVNLPVMIVSYPAFRYMGLRRSLPLPPWSVVLSQILFYFFLEDFVFYWGHRVLHTKWLYKHVHSVHHEHATPFGLTSEYAHPAEILFLG-FATIIGPALTGPHLLTLWLWMILRVLETVEVHSGYHFPWSPANFLPLYGGAEFHDYHHRVLYTKSGNYSSTFIYMDWLFGTDKGYRK 255          
The following BLAST results are available for this feature:
BLAST of NO17G00790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_004352512.11.500e-3938.174alpha-methyl-sterol C4-methyl-oxidase [Acanthamoe... [more]
XP_004992472.11.000e-3738.11hypothetical protein PTSG_07059 [Salpingoeca roset... [more]
XP_008803120.12.700e-3336.71PREDICTED: methylsterol monooxygenase 2-1-like [Ph... [more]
XP_020273644.14.500e-3338.05methylsterol monooxygenase 2-2-like [Asparagus off... [more]
XP_020101158.14.500e-3334.87methylsterol monooxygenase 2-1-like [Ananas comosu... [more]
XP_010937561.17.800e-3335.90PREDICTED: methylsterol monooxygenase 2-1 [Elaeis ... [more]
GAQ91192.11.700e-3235.55sterol 4-alpha-methyl-oxidase 2 [Klebsormidium nit... [more]
OAY74156.11.700e-3236.60Methylsterol monooxygenase 2-1, partial [Ananas co... [more]
XP_004240377.12.300e-3235.04PREDICTED: methylsterol monooxygenase 2-2 isoform ... [more]
XP_008801626.12.300e-3235.27PREDICTED: methylsterol monooxygenase 2-2-like iso... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL158nonsL158Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR084ngnoR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004801NSK004801Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G00790.1NO17G00790.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|169237gene_7806Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G00790.1NO17G00790.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G00790 ID=NO17G00790|Name=NO17G00790|organism=Nannochloropsis oceanica|type=gene|length=1648bp
ATGGACGCCATAAGCCGGCTGTGGCTCTCCCTAATCCAAGGACTGGGTCT
AAGTGAACGCTTGACATTCTTGgtgtgtgtgtgtgtgtacctgtgtatct
gtgtgggtgtgtgaatgtgtgagtgtatgggagttcatctcgtggcggga
ataagtaaagggaggacctctgacgggaaaacggacataaggtcaaccat
attaattgatttgtgctttcttctctttcatccccacccttgcagTTGGG
CGTGTACCTCGTAAGCGAGCTTTGGTACCTGTTCGTCGCGGGCTTTTACT
ACTTGTGCTGGGCACAAGACTGGTTTCTCCGCTACCGCATTCAAAAACGA
GCCACCATGCCTGATAACGCTCTAATCAAGAAGTGTCTGGAAGAGGTGTG
CGTCCGATCTGCCCTCGGTCGCCTACCTTTTCTATTCATCTTGTTTGATG
CCTTCAAGTACATGGGAATGGAGGTCTTTGCGCCGTTGCCGCCGTGGCCA
ACTGTCCTGAAGCACTGGGTCTTGGCCTTAGCCATAAATGACACACTATT
CTACTGGACTCATAGACTGATGCATCATCGATTGCTGTACAAACACTTTC
ACAAGAAGCATCACGAGTTCAGGgtaacgaaggagggagggattgaggga
atcgtgtagtctcctgcgtggtggccctgctgatccccctcgtatctctt
cgtatccaccaaacgtttagaactcactattttattgtggtttcccacct
tttttcccagGTCAACATCTCGGTCAACTCTGAGTACGCTGGACTGGTGG
AAGTGGCGATGTGTGACGTCCTCCCCACCCTCGCGGGCTGCCTCCTCCTT
GGTTCCCACCTCCTTGTCATGCTAGGTTGGACGAGCTTTCGCGTCTGGGA
GACATGTGCAGCACACTCGGGTTATGCTTTTCCGTGGTGTCCTTTCACGC
AATTACCTTTTTTCAATGGTCCGCAGATgtgagtagagtgagggagaagg
gaagagaaggagaggtgggaaggaggtgaaggtggagagagttttctttg
tgtgagatcatttcgatctatgcttggttcgaatagtagccgacccatat
cttccatttcttcgccttttctcacatgtcttccgtccagGCATGATTAC
CACCACTCGCACAATGTTGGAGCCTACGGTGCCGTGACGCGCTTCTGGGA
CGCCTGGATAGGTACTGACGGTCACTATCATGAGCACGCACGCCGGCATC
CAGACCCTTGCATCCCTTGCAAGGGACGCTTGGTGGACGTCCCTCTCAGC
CACGCCGCTCTTCCCTCCCTCCACTCGATTCGGTCCTCGGCGGCGGCGGT
GTCGACGTGGTGGGAGGGAGGAAAGGAGGGTAAGCCAAGGTTGGTGAGTT
GTGATGCCGGCATGTTCAAGAGCAATAGCAGTAGCAGTATGTATAGTAGT
GGCAGCAGTACCAGCACCGATGGCGATGGTTTTGAGAGCAGCAGTGAGGG
TAACAGTGATTCTAATGAAAACGACAGTCGCAGAAGCAGTGGCAAGGGGG
AGTTGAAAGGTGATTTGCCCAGCGCTATCACACCACACCATTCGTGTGTA
GAAGAAAATAGCGGCATCAACGATATAGATAGCAGCAACAACAAATGA
back to top

protein sequence of NO17G00790.1

>NO17G00790.1-protein ID=NO17G00790.1-protein|Name=NO17G00790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=392bp
MDAISRLWLSLIQGLGLSERLTFLLGVYLVSELWYLFVAGFYYLCWAQDW
FLRYRIQKRATMPDNALIKKCLEEVCVRSALGRLPFLFILFDAFKYMGME
VFAPLPPWPTVLKHWVLALAINDTLFYWTHRLMHHRLLYKHFHKKHHEFR
VNISVNSEYAGLVEVAMCDVLPTLAGCLLLGSHLLVMLGWTSFRVWETCA
AHSGYAFPWCPFTQLPFFNGPQMHDYHHSHNVGAYGAVTRFWDAWIGTDG
HYHEHARRHPDPCIPCKGRLVDVPLSHAALPSLHSIRSSAAAVSTWWEGG
KEGKPRLVSCDAGMFKSNSSSSMYSSGSSTSTDGDGFESSSEGNSDSNEN
DSRRSSGKGELKGDLPSAITPHHSCVEENSGINDIDSSNNK*
back to top
Synonyms
Publications