NO17G00710, NO17G00710 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G00710 vs. NCBI_GenBank
Match: XP_005852675.1 (queuosine biosynthesis protein [Nannochloropsis gaditana CCMP526] >EKU23153.1 queuosine biosynthesis protein [Nannochloropsis gaditana CCMP526] >EWM21157.1 6-pyruvoyl tetrahydropterin synthase/QueD family protein [Nannochloropsis gaditana]) HSP 1 Score: 230.7 bits (587), Expect = 2.500e-57 Identity = 108/124 (87.10%), Postives = 114/124 (91.94%), Query Frame = 0 Query: 1 MIAHSFKGEQFGPAQNVHGATYTVDVTFRSKALVPKCNWVVDIGEASTALGRILSKYNFKNLDEVFPEGENTTTEFMCKAIHGDLAKFFCTDRAKTGGGERFKGSICVKLWESHKAWACYEANV 125 MIAHSFKGEQFGPAQN+HGATYTVDVTFRSK LVPK NWV+DIGEASTAL RILSKYNFKNLD+VFPEGENTTTEFMC+AIH DLA FCT+RAK+ ERFKGSICVKLWESHKAWACYEA V Sbjct: 42 MIAHSFKGEQFGPAQNIHGATYTVDVTFRSKNLVPKNNWVIDIGEASTALSRILSKYNFKNLDQVFPEGENTTTEFMCRAIHRDLAAHFCTNRAKS-KEERFKGSICVKLWESHKAWACYEAIV 164
BLAST of NO17G00710 vs. NCBI_GenBank
Match: CBN79282.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 168.3 bits (425), Expect = 1.500e-38 Identity = 80/124 (64.52%), Postives = 94/124 (75.81%), Query Frame = 0 Query: 1 MIAHSFKGEQFGPAQNVHGATYTVDVTFRSKALVPKCNWVVDIGEASTALGRILSKYNFKNLDEVFPEGENTTTEFMCKAIHGDLAKFFCTDRAKTGGGERFKGSICVKLWESHKAWACYEANV 125 MIAHSF+G QFGPAQ +HGATYTVD F++ ALV K NWVVDIG AS L +LSKYNFKNL+E+FP G+NTTTEFMCK I +LA AK G+ F G++C+KLWESHKAW CYE +V Sbjct: 42 MIAHSFEGPQFGPAQEMHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLAAVLSKYNFKNLNEIFP-GQNTTTEFMCKVIFDELA-------AKC--GKDFHGTLCIKLWESHKAWGCYEGDV 155
BLAST of NO17G00710 vs. NCBI_GenBank
Match: XP_005832052.1 (hypothetical protein GUITHDRAFT_152839 [Guillardia theta CCMP2712] >EKX45072.1 hypothetical protein GUITHDRAFT_152839 [Guillardia theta CCMP2712]) HSP 1 Score: 154.8 bits (390), Expect = 1.700e-34 Identity = 74/124 (59.68%), Postives = 90/124 (72.58%), Query Frame = 0 Query: 1 MIAHSFKGEQFGPAQNVHGATYTVDVTFRSKALVPKCNWVVDIGEASTALGRILSKYNFKNLDEVFPEGENTTTEFMCKAIHGDLAKFFCTDRAKTGGGERFKGSICVKLWESHKAWACYEANV 125 MIAHSF G++FGPAQN+HGATYTVDV F ++L P+ NWV+DIGE T L ++L +YNFKNL+E+FP GENTTTEFMCK I L C + +FKGSI VKLWESH AWA Y ++ Sbjct: 72 MIAHSFTGKEFGPAQNMHGATYTVDVEFHVESLAPRLNWVLDIGEGMTMLKKVLGEYNFKNLNELFP-GENTTTEFMCKKIFEGL----CVELK-----GKFKGSITVKLWESHSAWASYTNDI 185
BLAST of NO17G00710 vs. NCBI_GenBank
Match: OEU15600.1 (tetrahydrobiopterin biosynthesis enzymes-like protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 146.7 bits (369), Expect = 4.700e-32 Identity = 71/121 (58.68%), Postives = 84/121 (69.42%), Query Frame = 0 Query: 1 MIAHSFKGE-QFGPAQNVHGATYTVDVTFRSKALVPKCNWVVDIGEASTALGRILSKYNFKNLDEVFPEGENTTTEFMCKAIHGDLAKFFCTDRAKTGGGERFKGSICVKLWESHKAWACY 121 MIAHSF G FGPA +HGATYT DV F SK L P+ NWV+DIG+A L ++LS+YN KNLD+VFP+ TTTEFMCK IH D+ + D K FKG++ VKLWESHKAWA Y Sbjct: 10 MIAHSFHGHPSFGPAGGLHGATYTADVEFLSKELHPEFNWVIDIGKALDILSKVLSRYNLKNLDDVFPDNIMTTTEFMCKQIHDDICRLL-EDECKD-----FKGAVRVKLWESHKAWATY 124
BLAST of NO17G00710 vs. NCBI_GenBank
Match: XP_002179914.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48900.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 143.7 bits (361), Expect = 3.900e-31 Identity = 71/125 (56.80%), Postives = 80/125 (64.00%), Query Frame = 0 Query: 1 MIAHSF-KGEQFGPAQNVHGATYTVDVTFRSKALVPKCNWVVDIGEASTALGRILSKYNFKNLDEVFPEGENTTTEFMCKAIHGDLAKFFCTDRAKTGGGERFKGSICVKLWESHKAWACYEANV 125 MIAHSF + FGPA +HGATYT DV F L P NWV+DIG+AS L +L+KYN KNLDEVFP G+ TTTEFMCK IH DL + F G +CVKLWESHKAWA Y V Sbjct: 37 MIAHSFHRHPAFGPAGGMHGATYTCDVEFSKDTLDPDTNWVMDIGKASELLCTVLAKYNLKNLDEVFPNGQLTTTEFMCKQIHMDLVDLIRRE------FHDFHGEVCVKLWESHKAWAAYSGVV 155
BLAST of NO17G00710 vs. NCBI_GenBank
Match: EJK69264.1 (hypothetical protein THAOC_09485, partial [Thalassiosira oceanica]) HSP 1 Score: 132.9 bits (333), Expect = 7.000e-28 Identity = 66/124 (53.23%), Postives = 83/124 (66.94%), Query Frame = 0 Query: 1 MIAHSFKGE-QFGPAQNVHGATYTVDVTFRSKALVPKCNWVVDIGEASTALGRILSKYNFKNLDEVFPEGENTTTEFMCKAIHGDLAKFFCTDRAKTGGGE--RFKGSICVKLWESHKAWACYE 122 MIAHSF G FGPA +HGATYTVDV F S+AL P+CNWV+DIG AS + +L KYN++NLD VF + TTTEFMCK IH + + R G + F+G + V L+ESHKAWA ++ Sbjct: 95 MIAHSFHGHPSFGPAGGLHGATYTVDVEFASEALHPECNWVIDIGLASDLVADVLKKYNYQNLDVVFGKKIMTTTEFMCKEIHTRVVERLREKRQSEDGSDDNDFRGWVKVTLFESHKAWASFD 218
BLAST of NO17G00710 vs. NCBI_GenBank
Match: XP_002289971.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93508.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 132.9 bits (333), Expect = 7.000e-28 Identity = 65/122 (53.28%), Postives = 80/122 (65.57%), Query Frame = 0 Query: 1 MIAHSFKGE-QFGPAQNVHGATYTVDVTFRSKALVPKCNWVVDIGEASTALGRILSKYNFKNLDEVFPEGENTTTEFMCKAIHGDLAKFFCTDRAKTGGGERFKGSICVKLWESHKAWACYE 122 MIAHSF FGPA +HGATYTVDV F S L +CNWV+DIG AS + +L++YN+KNLDEVF + TTTEFMC+AI + K +R + F+G I V LWESHKAW +E Sbjct: 68 MIAHSFHSHPSFGPAGGLHGATYTVDVEFASSTLHKECNWVIDIGVASAMVAEVLTEYNYKNLDEVFGDNVMTTTEFMCRAIFDGVVKKL-KERYSDIDVDHFEGWIKVTLWESHKAWGSFE 188
BLAST of NO17G00710 vs. NCBI_GenBank
Match: XP_005706351.1 (6-pyruvoyl tetrahydropterin synthase [Galdieria sulphuraria] >EME29831.1 6-pyruvoyl tetrahydropterin synthase [Galdieria sulphuraria]) HSP 1 Score: 129.0 bits (323), Expect = 1.000e-26 Identity = 64/124 (51.61%), Postives = 86/124 (69.35%), Query Frame = 0 Query: 1 MIAHSFKGEQFGPAQNVHGATYTVDVTFRSKALVPKCNWVVDIGEASTALGRILSKYNFKNLDEVFP-EGENTTTEFMCKAIHGDLAKFFCTDRAKTGGGERFKGSICVKLWESHKAWACYEAN 124 MIAHSF+GE FGPAQ +HGATYTVD FRS L P+ NWV+DIGEA+ L +LS YN++NLD++ +G+NTTTE++ + IH + +AK G F+G + V L ES +AWA YE++ Sbjct: 11 MIAHSFQGEAFGPAQGLHGATYTVDCEFRSTNLQPQLNWVIDIGEATQILKDVLSLYNYRNLDQLEEFQGQNTTTEYLARVIHDKV-----LSKAKMLG---FQGILKVSLMESFRAWASYESD 126
BLAST of NO17G00710 vs. NCBI_GenBank
Match: OSX70073.1 (hypothetical protein BU14_0930s0005 [Porphyra umbilicalis]) HSP 1 Score: 126.3 bits (316), Expect = 6.500e-26 Identity = 62/121 (51.24%), Postives = 82/121 (67.77%), Query Frame = 0 Query: 1 MIAHSFKGEQFGPAQNVHGATYTVDVTFRSKALVPKCNWVVDIGEASTALGRILSKYNFKNLDEVFP-EGENTTTEFMCKAIHGDLAKFFCTDRAKTGGGERFKGSICVKLWESHKAWACY 121 MIAHSFKGE+FGPAQ HGATYT+D + +K LV NWV++I +A+ AL +++++N++NLDEV +G+NTTTEF+ AIH LAK F G++ V L ESHKAWA Y Sbjct: 12 MIAHSFKGEEFGPAQRTHGATYTIDAEWSAKELVSGVNWVLNIADAADALEAVVAEWNYRNLDEVAAFDGQNTTTEFLSHAIHSALAKRL----------PSFVGTLKVTLQESHKAWASY 122
BLAST of NO17G00710 vs. NCBI_GenBank
Match: EJK72442.1 (hypothetical protein THAOC_06029, partial [Thalassiosira oceanica]) HSP 1 Score: 124.8 bits (312), Expect = 1.900e-25 Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 0 Query: 7 KGEQFGPAQNVHGATYTVDVTFRSKALVPKCNWVVDIGEASTALGRILSKYNFKNLDEVFPEGENTTTEFMCKAIHGDLAKFFCTDRAKTGGGE--RFKGSICVKLWESHKAWA 119 + FGPA +HGATYTVDV F S+AL P+CNWV+DIG AS + +L KYN++NLDEVF + TTTEFMCK IH + + R G + F+G + V L+ESHKAWA Sbjct: 28 RASAFGPAGGLHGATYTVDVEFASEALHPECNWVIDIGLASDLVADVLKKYNYQNLDEVFGKKIMTTTEFMCKEIHTRVVERLREKRQSEDGSDDNDFRGWVKVTLFESHKAWA 141 The following BLAST results are available for this feature:
BLAST of NO17G00710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G00710 ID=NO17G00710|Name=NO17G00710|organism=Nannochloropsis oceanica|type=gene|length=375bpback to top protein sequence of NO17G00710.1 >NO17G00710.1-protein ID=NO17G00710.1-protein|Name=NO17G00710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=125bpback to top Synonyms
Publications
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