NO17G00490, NO17G00490 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G00490 vs. NCBI_GenBank
Match: EWM21172.1 (hypothetical protein Naga_100111g9 [Nannochloropsis gaditana]) HSP 1 Score: 198.0 bits (502), Expect = 2.200e-47 Identity = 90/141 (63.83%), Postives = 112/141 (79.43%), Query Frame = 0 Query: 16 NASPTDFLMLSAVMQVLLTILLGWLMLIPHQAWGHDLAFATRLRSRHVAMAHVDWVMLALVQFAAAYAMSLKSPSQAFIVSRCLVFNGWIAPTVYLAKAWGINGFRLDGKRGMDTLIGLAGLMGIVTFTYGWAMIVGAWWL 157 +A PT+FL+ S V+Q+L T +LGW ML+PHQAWG + ATRLRSR VAMAHVDW+MLALVQFAAAY ++LK+ A +V+RCL F GW+ P+VY+A+AWGINGFRLDGKR DT++G G GI+ FTYGWA IV WW+ Sbjct: 35 SAGPTEFLVRSGVLQILFTTILGWAMLLPHQAWGPSSSLATRLRSRDVAMAHVDWIMLALVQFAAAYILTLKAVPSAHVVARCLAFYGWVGPSVYMARAWGINGFRLDGKRMWDTVMGTLGFTGILAFTYGWAQIVRVWWM 175
BLAST of NO17G00490 vs. NCBI_GenBank
Match: WP_050432998.1 (hypothetical protein [Chondromyces crocatus] >AKT41185.1 uncharacterized protein CMC5_053460 [Chondromyces crocatus]) HSP 1 Score: 89.0 bits (219), Expect = 1.500e-14 Identity = 54/140 (38.57%), Postives = 79/140 (56.43%), Query Frame = 0 Query: 17 ASPTDFLMLSAVMQVLLTILLGWLMLIPHQAWGHDLAFATRLRSRHVAMAHVDWVMLALVQFAAAYAMSLKSPSQAFIVSRCLVFNGWIAPTVYLAKAWGINGFRLDGKRGMDTLIGLAGLMGIVTFTYGWAMIVGAWWL 157 + P L + +QVL++ LLG MLIP Q WG L A R+ + + AH+DW+MLA +Q+ AA+AM+ S +++ V+ LVF GW PT YL + GIN F L G+ +AGL + WA++ +W L Sbjct: 7 SDPVRLLAANGALQVLVSSLLGVYMLIPMQPWGKRL--APRVNMKSLLAAHLDWLMLAFMQWGAAFAMNTWSSTRSLAVALLLVFGGWTNPTPYLLRGAGINAFVLAGRPAQIVAASVAGLSSL-AIIIAWAIL--SWGL 141
BLAST of NO17G00490 vs. NCBI_GenBank
Match: OGA81084.1 (hypothetical protein A2711_08105 [Burkholderiales bacterium RIFCSPHIGHO2_01_FULL_63_240]) HSP 1 Score: 79.7 bits (195), Expect = 8.800e-12 Identity = 46/136 (33.82%), Postives = 71/136 (52.21%), Query Frame = 0 Query: 16 NASPTDFLMLSAVMQVLLTILLGWLMLIPHQAWGHDLAFATRLRSRHVAMAHVDWVMLALVQFAAAYAMSLKSPSQAFIVSRCLVFNGWIAPTVYLAKAWGINGFRLDGKRGMDTLIGLAGLMGIVTFTYGWAMIV 152 N P L +A +QVL++ LLG MLIP Q WG L A R+ + + H+DW MLA +Q+ AA+ M ++ +++ L+F GW YL + +G+N F + G G+AGL ++ W I+ Sbjct: 2 NFDPVFALSCNAALQVLVSSLLGTFMLIPLQPWGKKL--AARVNMKSLLATHMDWYMLAFMQWGAAFMMDRWDAARDPVLALLLMFGGWTNALPYLLRGFGVNAFVMGGNTLQRVSAGIAGL-SVLAILVAWTAII 134
BLAST of NO17G00490 vs. NCBI_GenBank
Match: APR77485.1 (Hypothetical protein A7982_02832 [Minicystis rosea]) HSP 1 Score: 79.7 bits (195), Expect = 8.800e-12 Identity = 49/129 (37.98%), Postives = 67/129 (51.94%), Query Frame = 0 Query: 23 LMLSAVMQVLLTILLGWLMLIPHQAWGHDLAFATRLRSRHVAMAHVDWVMLALVQFAAAYAMSLKSPSQAFIVSRCLVFNGWIAPTVYLAKAWGINGFRLDGKRGMDTLIGLAGLMGIVTFTYGWAMIV 152 L+ +AV QVL + L GW ML+P Q WG + L + AH+DW+ML L Q AYA L P +V+ LVF GW+ P YL +A G + F L G LAG + T G+++I+ Sbjct: 5 LVTNAVAQVLFSCLFGWAMLVPMQPWGQ--RWRNILPVKAALAAHLDWIMLGLAQGLVAYASGLVEPRHPTLVTALLVFGGWVNPVPYLLRAKGTDAFVLAGGLRQRAAALLAGTSSL-ALTIGFSLIL 130
BLAST of NO17G00490 vs. NCBI_GenBank
Match: PHR78006.1 (hypothetical protein COA60_03575 [Robiginitomaculum sp.]) HSP 1 Score: 66.6 bits (161), Expect = 7.700e-8 Identity = 40/132 (30.30%), Postives = 67/132 (50.76%), Query Frame = 0 Query: 23 LMLSAVMQVLLTILLGWLMLIPHQAWGHDLAFATRLRSRHVAMAHVDWVMLALVQFAAAYAMSLKSPSQAFIVSRCLVFNGWIAPTVYLAKAWGINGFRLDGKRGMDTLIGLAGLMGIVTFTYGWAMIVGAW 155 L+ S +L + LLG LML+P QA H+ + +H+ AH+DW++L L+Q A + + + + +V ++F GWI P Y+ KA+G+N F+ G L GL + ++ GA+ Sbjct: 10 LLFSGGAAILFSSLLGVLMLMPLQA--HEPKKKAGVNFKHIGAAHLDWIILGLMQGLAGALIWVFALDVSLMVLGLMIFGGWINPLAYVFKAFGVNAFQFSGGAVQQFAAALGGLSSLAIIVAWTLILFGAY 139 The following BLAST results are available for this feature:
BLAST of NO17G00490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G00490 ID=NO17G00490|Name=NO17G00490|organism=Nannochloropsis oceanica|type=gene|length=471bpback to top protein sequence of NO17G00490.1 >NO17G00490.1-protein ID=NO17G00490.1-protein|Name=NO17G00490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=157bpback to top Synonyms
Publications
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