NO17G00370, NO17G00370 (gene) Nannochloropsis oceanica

Overview
NameNO17G00370
Unique NameNO17G00370
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2938
Alignment locationchr17:134438..137375 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:134438..137375 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO17G00370 vs. NCBI_GenBank
Match: EWM21189.1 (hypothetical protein Naga_100987g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 192.2 bits (487), Expect = 4.500e-45
Identity = 130/271 (47.97%), Postives = 154/271 (56.83%), Query Frame = 0
Query:    4 STAGVRGARRGINPFLVLKCFAAFGVVQLLVFIKVFWTFADN--YYTGASHGEGGGGEGGIRAGWLDGGLRRGGHGKQAYEMLSADAREGEGFLAVGDGSGKEKAPSFHPHRPLVPSPRPDDGRAAAAAPEGAAGAAPIDTEAVTKTTEYRVAMLLPFMGPAFPTWFRTFASSLADRADGSVPLDWYLFHEGARTPLGFTPPPNVRLIDLRPEGGLARRIVRKGRGVLFPSNEPEGGREEAGEGGDFDEDAAVGVLEEALQMTPALLIQFK 273
            ++  V  ARRG + FL    FAAF   QL +  KVF  F D     T  +  E  G E G + G      R    GK+ YE LS            GD    +  P+       +PSP PD+ RA                   T   +YRVAMLLPF+GP FP+WFRTFA+SLA R DGSVP+DW++FHEGAR PLG+ PP NV LIDLRPEGGLARRIVR+GRGVLF    PE GRE+  E G FDE+ AV +L E L+  PALLIQFK
Sbjct:    2 ASGSVSHARRGFSRFLWPLGFAAFWAAQLYLSWKVFSAFTDKDAPSTLLAVPESYGEESGRKMGMWADRTRLWNQGKR-YEALSLS----------GDMLRGQNLPTRAVPPLPIPSPGPDESRAQ------------------TGKKKYRVAMLLPFIGPIFPSWFRTFAASLAARDDGSVPMDWFIFHEGARVPLGYHPPTNVHLIDLRPEGGLARRIVRRGRGVLF----PESGREQGKEKG-FDEEEAVAILREGLKRKPALLIQFK 238          
BLAST of NO17G00370 vs. NCBI_GenBank
Match: OEU13412.1 (hypothetical protein FRACYDRAFT_226728 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 114.4 bits (285), Expect = 1.200e-21
Identity = 113/435 (25.98%), Postives = 185/435 (42.53%), Query Frame = 0
Query:  150 EYRVAMLLPFMG---PAFPTWFRTFASSLADRADGSVPL-DWYLFHEGARTPLG------------------------FTPPPNVRLIDLRPEGGLARRIVRKGRGVLFPSNEPEGGREEAGEGGDFDEDAAVGVLEEALQMTPALLIQFKPALGLLFADHLLPSHTHWGYADLDILVGRIFAPPSPSPPPSFTLTPLELSRHHILTLSFGDQFRGYVRGQFTLHARPLSLPASLLLAGCPSFLPPSHPSSPDNHHPPEAQFFFESI--RKGRLAQASAEGCYSYSLLSLVLPPXXXXXXXXXXXXLSIKYALGAFSDASDRAHDLRGMDDGGKEDVVDG-GRFHEALLLRDGRVLRCEGKGKSITSCFASLNQV-EEGKRKKRKEKGNEGGVTLVPVEREEEGKECMWWVPRAFQ--VCLKNTTARDAIYFVNG 551
            ++R+A+++PF+G    A P++   F ++    A GS  L D+ L H+G   P                          F+ P NV    L    G++R +V+   G      +PE   +E   GG   ++   G+L + ++  P ++++FKPALG +F  H L  +THWGY+DLDI+ G +             +TP EL+   I+T  FGDQ R Y+RGQFT+H         L       + P  + S  D          FE +  ++  L   SAEGCYS ++L                  + IKYA+ AF+DA          D      V  G G+  +  ++    +    G     +  F     +  +      K  G    + ++    E+E  +CM+W  + +Q  +C+    + D IY+++G
Sbjct:   42 KHRIAIIIPFIGESPDAIPSYLELFCAT----AGGSASLVDFLLIHDGVLDPYHQXXXXXXXXXXXXXXXXXXXXRALFSCPENVIFHSLGSLEGISRALVKVVDG------KPE---QELKLGG--SKEKLAGILTKYIRNYPYVMVEFKPALGHIF-QHYLDGYTHWGYSDLDIMFGDL----------ERWITPDELTEFDIVTYGFGDQHRVYLRGQFTIHRNDPEKINQL-------WRPCDYLSHMDTR--------FEQVLSKEETLHFESAEGCYSAAVLE--------------RDDIKIKYAVKAFTDAEQEKKKKEDKDTAYTHGVYVGTGKKKDRTIIYKAGMDNRRGLSTIPSDWFERKGSIYNDPNTLLYKSVGKREILPMI----EKESVKCMYWAQKKYQSRLCIDGVDSTDTIYWIHG 417          
BLAST of NO17G00370 vs. NCBI_GenBank
Match: XP_005756301.1 (hypothetical protein EMIHUDRAFT_466309 [Emiliania huxleyi CCMP1516] >EOD03872.1 hypothetical protein EMIHUDRAFT_466309 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 105.1 bits (261), Expect = 7.200e-19
Identity = 79/228 (34.65%), Postives = 113/228 (49.56%), Query Frame = 0
Query:  143 EAVTKTTEYRVAMLLPFMG--PAFPTWFRTFASSLADRADGSVPLDWYLFHEGARTPLGFTPPPNVRLIDLRPEGGLARRIVRKGRGVLFPSNEPEGGREEAGEGGDF----DEDAAVGVLEEALQMTPALLIQFKPALGLLFADHLLPSHTHWGYADLDILVGRIFAPPSPSPPPSFTLTPLELSRHHILTLSFGDQFRG------------YVRGQFTLHARPLSL 353
            E   +  EYRVA+L+P +G  PAF  +F      LA     S  +D+ LFHEG R P  +  PPNV+L+D+ P  G A    R  R          G RE AG G       +  A +  L+   +  P L+ ++KPA G  F+D+LL  ++HWGY DLD++VG +         P+F L   EL+   I+T S+G++               Y+RGQFT+H    S+
Sbjct:  744 ECGARHPEYRVAVLVPLLGPPPAFLPYF------LASARTSSALVDFVLFHEGQRLP--WERPPNVKLVDVGP--GAASESERPARA--------SGQRERAGSGELHLPLRNATAVLRSLKRLFERWPRLIAEYKPAYGRFFSDYLL-GYSHWGYCDLDMVVGSL---------PTF-LERSELAEQDIVTFSYGERLAAPHPARRRDASGLYLRGQFTIHRNDHSI 942          
BLAST of NO17G00370 vs. NCBI_GenBank
Match: XP_002178703.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49401.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 104.4 bits (259), Expect = 1.200e-18
Identity = 113/422 (26.78%), Postives = 179/422 (42.42%), Query Frame = 0
Query:  151 YRVAMLLPFM--GP-AFPTWFRTFASSLADRADGSVPLDWYLFHEGARTPLGFTP--PPNVRLIDLRPEGGLARRIVRKGRGVLFPSNEPEGGREEAGEGG-DFDEDAAVGVLEEALQMTPALLIQFKPALGLLFADHLLPSHTHWGYADLDILVGRIFAPPSPSPPPSFTLTPLELSRHHILTLSFGDQFRGYVRGQFTLHARPLSLPASLLLAGCPSFLPPSHPSSPDNHHPPEAQFFFESIRKGRLAQASAEGCYSYSLLSLVLPPXXXXXXXXXXXXLSIKYALGAFSDASDRAHDLRGMDDGGKEDVVDGGRF------------HEALLLRDGRVLRCEGKGKSITSCFASLNQVEEGKRKKRKEKGNEGGVTLVPVEREEEGKECMWWVPRAFQ--VCLKNT--TARDAIYFVNG 551
            +R+A++LPF+  GP   P +   F    A   D    +D+ L H G  T        P NV  IDL+     AR +++                +E  +    F  D  + +L + L+  P  L++FKPALG +F ++ L S++HWGY+DLD+L G +          S  +TP EL+   ++T  FGDQ R Y RGQFT H    +   + L   C       + S  D      A+   E   K +    SAEGCYS +LL                  + +KYA+ A++D               K+ V   G +            ++A     G+VL   G G      F S + V   +++  +    E     +P  ++     CM+WV   +Q  +CL+ +  ++ D +Y++NG
Sbjct:   59 HRIAIVLPFIAAGPELIPPYLELFCMGAAGSMD---TVDFLLIHNGVLTNWARKADCPSNVIWIDLQSTESFARLLIKT--------------MDEIDDADLAFSRDNMILLLAKHLEQFPYALVEFKPALGYIFQEY-LESYSHWGYSDLDMLFGDL----------SRWITPDELTEFDVVTYGFGDQHRLYARGQFTFHRN--TPRVNTLWRKC------EYLSRMDQRF---AKILSE---KKKFKFESAEGCYSVALLQ--------------HYDIRVKYAVKAWTDTQ------------AKDTVYTHGVYLARSASSFRHVIYKAQSAAQGKVLGELGAG-----WFESHDYVYADRQRPLQRSTGERESLDLPNMKD---VNCMYWVRGTYQSELCLQESAVSSSDTVYWING 404          
BLAST of NO17G00370 vs. NCBI_GenBank
Match: CBJ26313.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 103.2 bits (256), Expect = 2.700e-18
Identity = 82/306 (26.80%), Postives = 129/306 (42.16%), Query Frame = 0
Query:  253 AVGVLEEALQMTPALLIQFKPALGLLFADHLLPSHTHWGYADLDILVGRIFAPPSPSPPPSFTLTPLELSRHHILTLSFGDQFRGYVRGQFTLHARPLSLPASLLLAGCPSFLPPSHPSSPDNHHPPEAQFFFESIRKGRLAQASAEGCYSYSLLSLVLPPXXXXXXXXXXXXLSIKYALGAFSDASDRAHDLRGMDDGGKEDVVDGGRFHEALLLRDGRVLRCE----GKGKSITSCFASLNQVEEGKRKKRKEKGNEGGVTLVPVEREEEGKECMWWVPRAFQVC--LKNTTARDAIYFVNGSF 553
            A   +++ L   P  +++FKPALG +F ++ L  +THW Y DLD+  G +             L P E+  + I+T SFGDQ R Y+RGQ T+H     +  + +  GCP             H     +    ++   +    SAEGCYS +L+                  +  KYA+  F+D             GGK+D  +     E ++  DG V RC      +G  +   F    QV++G+                PVE EE+G  C +W+   FQ C  LK +  +  ++ + G +
Sbjct:   18 AARFIQKLLAKNPYYMVEFKPALGWVFREY-LKDYTHWAYGDLDVFFGDL---------TKGWLEPSEMRDYDIITYSFGDQQRAYLRGQLTVHKSIHKV--NHIWRGCP-------------HLSNYYRRIERTMETKQYNLESAEGCYSMALM--------------YSKDVKAKYAVKVFTDM-----------PGGKQDDQE-----EVVITGDGLVKRCPQQQGRRGDVVEPDFGGKMQVDKGE--------------YFPVETEEQGYFCEYWISPNFQTCLKLKESLTKTNVFLLEGRY 254          
BLAST of NO17G00370 vs. NCBI_GenBank
Match: XP_005768495.1 (hypothetical protein EMIHUDRAFT_459226 [Emiliania huxleyi CCMP1516] >EOD16066.1 hypothetical protein EMIHUDRAFT_459226 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 100.5 bits (249), Expect = 1.800e-17
Identity = 66/195 (33.85%), Postives = 95/195 (48.72%), Query Frame = 0
Query:  152 RVAMLLPFMGPAFPTWFRTFASSLADRADGSVPLDWYLFHEGARTPLGFTPPPNVRLIDLRPEGGLARRIVRKGRGVLFPSNEPEGGREEAGEGGDFDEDAAVGVLEEALQMTPALLIQFKPALGLLFADHLLPSHTHWGYADLDILVGRIFAPPSPSPPPSFTLTPLELSRHHILTLSFGDQFRGYVRGQFTLH 347
            R+A+ LP++G  FP+WF  F   LA     S  +DW +FHE AR P     PPNV   DL           R G G LF      G +  +  G        + +   A +    ++ ++KP  G +FAD+ L  ++HW Y D D+LVG +             L+  EL+ + ++T  FGD FR Y+RGQF+LH
Sbjct:  176 RLALTLPWVGSTFPSWFPYF---LASTNRSSYLVDWLIFHEEARLPPAGEVPPNVLFFDLG----------RGGLGSLF------GLKLASALGATNKLTRYMNLFRAAFRDFAYIITEYKPTHGTVFADY-LAGYSHWSYTDSDVLVGDL----------PLHLSLEELTEYDVVTYHFGDAFRLYLRGQFSLH 340          
BLAST of NO17G00370 vs. NCBI_GenBank
Match: XP_005769809.1 (hypothetical protein EMIHUDRAFT_464205 [Emiliania huxleyi CCMP1516] >EOD17380.1 hypothetical protein EMIHUDRAFT_464205 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 100.5 bits (249), Expect = 1.800e-17
Identity = 85/289 (29.41%), Postives = 123/289 (42.56%), Query Frame = 0
Query:  152 RVAMLLPFMGPAFPTWFRTFASSLADRADGSVPLDWYLFHEGARTPLGFTPPPNVRLIDLRPEGGLARRIVRKGRGVLFPSNEPEGGREEAGEGGDFDEDAAVGVLEEALQMTPALLIQFKPALGLLFADHLLPSHTHWGYADLDILVGRIFAPPSPSPPPSFTLTPLELSRHHILTLSFGDQFRGYVRGQFTLHARPLSLPASLLLAGCPSFLPPSHPSSPDNHHPPEAQFFFESIRKGRLAQASAEGCYSYSLLSLVLPPXXXXXXXXXXXXLSIKYALGAFSDASD 441
            R+A+ LP++G  FP+WF  F   LA     S  +DW +FHE AR P     PPNV   DL           R G G LF      G +  +  G        + +   A +    ++ ++KP  G +FAD+ L  ++HW Y D D+LVG +             L+  EL+ + ++T  FGD FR Y+RGQF+              AG    L   H            +      + GR    SAEGCYS+++ S                 + +K+A  AF+D SD
Sbjct:  265 RLALTLPWVGSTFPSWFPYF---LASTNRSSYLVDWLIFHEEARLPPAGEVPPNVLFFDLG----------RGGLGSLF------GLKLASALGATNKLTRYMNLFRAAFRDFAYIITEYKPTHGTVFADY-LAGYSHWSYTDSDVLVGDL----------PLHLSLEELTEYDVVTYHFGDAFRLYLRGQFS--------------AGLLDELEAKHML---------VKRLAAEGKHGRTRFLSAEGCYSHAVAS--------------ASGIRLKFAAKAFADWSD 486          
BLAST of NO17G00370 vs. NCBI_GenBank
Match: GAX13943.1 (hypothetical protein FisN_5Lh150 [Fistulifera solaris])

HSP 1 Score: 99.0 bits (245), Expect = 5.200e-17
Identity = 107/412 (25.97%), Postives = 173/412 (41.99%), Query Frame = 0
Query:  147 KTTEYRVAMLLPFMGPAFPTWFRTFASSLADRADGSVPLDWYLFHEGARTPLGFTPPPNVRLIDLRPEGGLARRIVRKGRGVLFPSNEPEGGREEAGEGGDFDEDAAVGVLEEALQMTPALLIQFKPALGLLFADHLLPSHTHWGYADLDILVGRIFAPPSPSPPPSFTLTPLELSRHHILTLSFGDQFRGYVRGQFTLHARPLSLPASLLLAGCPSFLPPSHPSSPDNHHPPEAQFFFESI--RKGRLAQASAEGCYSYSLLSLVLPPXXXXXXXXXXXXLSIKYALGAFSDASDRAHDLRGMDDGGKEDVVDGGRFHEALLLRDGRVLRCEGKGKSITSCFASLNQVEEGKRKKRKEKG-NEGGVTLVPV-EREEEGKECMWWVPRAFQ--VCLKNTTARD-AIYFVNGS 552
            ++++ R+A+L+PF       ++  F       A  +   D+ + H G           NV LI+L+    L +R++R    VL   NE    R    E           ++   L + P  L++FKPALG +F D LL  ++HWGY DLDI+ G +          S  +T  EL  + I+T S+GDQ R Y+RGQFT H    +   + +   C               +  +    F+SI   KG     SAEGCYS ++L                  + +KY   A++D  D A        G   D++     + A       + R +  G++     A L+     K     ++  + G +  + + +      +CM+WVP  +Q  +CL    A D  +Y++NGS
Sbjct:   36 RSSQLRLALLIPFAAKYNVPYWGIFCRGAVGAAGIA---DFIILHNGVLEDA--VCADNVILINLQSNQNLGKRLLR----VLDHKNETVIERSSLEE-----------LMTTLLDLRPYALVEFKPALGYIFQD-LLEGYSHWGYTDLDIVFGDL----------SHWITEDELLNYDIVTYSYGDQRRLYLRGQFTFHKN--NDKVNNIWRYC--------------RYLRDLDERFDSIVKSKGHFRVESAEGCYSAAVLD--------------RNDVRVKYVPHAWTDTHDEA-------GGTFRDILSSHGVYLARSKSRQVLYRAKSAGEN-ARLVARLDPSYWDKNGAYTQRDISLGSLEAIDIADAVHNDVKCMYWVPSEYQAKLCLSALIASDETLYWINGS 378          
BLAST of NO17G00370 vs. NCBI_GenBank
Match: CBJ48850.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 93.6 bits (231), Expect = 2.200e-15
Identity = 120/499 (24.05%), Postives = 187/499 (37.47%), Query Frame = 0
Query:  122 DDGRAAAAAPE--GAAGAAPIDTEAVTKTTE------YRVAMLLPFMGPAFPTWFRTFASSLADRADGSVPLDWYLFHEGARTPLGFTPPPNVRLIDL--RPEGGLARRIVRKGRGVLFPSNEPEGGREEAGEGGDFD----------------------------EDA----------------------------AVGVLEEALQMTPALLIQFKPALGLLFADHLLPSHTHWGYADLDILVGRIFAPPSPSPPPSFTLTPLELSRHHILTLSFGDQFRGYVRGQFTLHARPLSLPASLLLAGCPSFLPPSHPSSPDNHHPPEAQFFFESIRKGR-LAQASAEGCYSYSLLSLVLPPXXXXXXXXXXXXLSIKYALGAFSDASDRAHDLRGMDDGGKEDVVDGGRFHEALLLRDGRVLRCEGKGKSITSCFASLNQVEEGKRKKRKEKGNEGGVTLVPVEREEEGK-ECMWWVPRAFQVCLKNTTARDAIYFVNGSF 553
            D+  +A A P      G  P   +A  + TE       +VA+++P++G   P W+  FA   A   DG V  DW +F +  +  +    PPN++   +  R    L   +V  G     PS    G R +  +GGD D                            EDA                            A   L + L  +P  +++FKPA G LF ++ L  ++HW + DLD+L G +             L P EL    I+T SFGDQ+R Y+RGQ T+H     +  + +   C      SH ++             E+ R    L   SAEGCYS +  S                 L IK+ + A SD  D+  +       G+E ++DG       L  D      E  G    + + + N    G  ++++         + P+   E+ K  C  W+    Q C+K+      +Y + G +
Sbjct:  211 DNRTSAIAGPSEYWTTGINPWGAQAPPQPTEPDQFNGQKVAVVVPYVGKDLPVWWDVFAEQ-ARLNDGLV--DWIIFCD--QKLVRKRSPPNIKFFPMTTRRMAWLLAGVVEPGD----PSPAHGGDRGDVLDGGDCDGDNFDGDVDGAQKSHAEIEVQENDGNEGEDADVETAATSRVWEESITEVFAMNAVKRKRAASFLHQLLITSPYFIVEFKPAFGWLFREY-LTEYSHWAFGDLDVLFGDM---------RRGWLEPTELQDFDIITFSFGDQYRAYLRGQLTIHKNKADV--NRVWRRC------SHLTNYSER--------LEAFRVNHGLPLESAEGCYSLAAAS--------------DPSLRIKFTVKALSDV-DQEDEEAVAQKRGREVIIDGHGL--VTLCPDLEYYYNEPPGAGAGTNYGASNADGGGNGERKEGLSPSMQDAVGPMTSVEKAKGRCEHWIKPEHQTCVKDVGGSQTLYLIGGKY 657          
BLAST of NO17G00370 vs. NCBI_GenBank
Match: EJK71280.1 (hypothetical protein THAOC_07304 [Thalassiosira oceanica])

HSP 1 Score: 92.8 bits (229), Expect = 3.700e-15
Identity = 81/310 (26.13%), Postives = 142/310 (45.81%), Query Frame = 0
Query:  146 TKTTEYRVAMLLPFM-----GPAFPTWFRTFASSLADRADGSVPLDWYLFHEGARTPLGFTP-----PPNVRLIDLRPEG---GLARRIVRKGRGVLFPSNEPEGGREEAGEGGDFDEDAAVGVLEEALQMTPALLIQFKPALGLLFADHLLPSHTHWGYADLDILVGRIFAPPSPSPPPSFTLTPLELSRHHILTLSFGDQFRGYVRGQFTLHARPLSLPASLLLAGCPSFLPPSHPSSPDNHHPPEAQFFFESIRKGRLAQASAEGCYSYSLLSLVLPPXXXXXXXXXXXXLSIKYALGAFSDASDRA 443
            T+ ++ R+A+++P++      P FP +F  F +S A  AD    +D+ +FH     P    P     P NV+LID+  +    GL+R   R        ++E +   E          +   G+L   +   P +L+++KPA G +FAD+ +  ++HWGY+DLD++ G +          +  +   E + + I+T  FGDQ R Y+RGQFT H R   +  + +   C       + S  D  +  +            +   SAEGCYS +++S                 + +K+A+ AF+D  +++
Sbjct:  186 TRKSKNRLAIIIPYLPDADGAPTFPPYFDLFTTSAAGSAD---KIDFLIFH--CFVPPSLMPNEDALPANVKLIDMNEDSKKCGLSRLFTR-------VTDERQKNNEM-----KITLEKLTGMLSTQIIDYPYILVEYKPAFGHIFADY-IEDYSHWGYSDLDVVFGDV----------TRWIDDDEWNGYDIVTYGFGDQDRLYLRGQFTFH-RNDPMYINQIWRHC------RYLSKMDVRYATK-----------HIKFESAEGCYSQAVIS--------------RKDIKVKWAVKAFTDVGEKS 435          
The following BLAST results are available for this feature:
BLAST of NO17G00370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 15
Match NameE-valueIdentityDescription
EWM21189.14.500e-4547.97hypothetical protein Naga_100987g2, partial [Nanno... [more]
OEU13412.11.200e-2125.98hypothetical protein FRACYDRAFT_226728 [Fragilario... [more]
XP_005756301.17.200e-1934.65hypothetical protein EMIHUDRAFT_466309 [Emiliania ... [more]
XP_002178703.11.200e-1826.78predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CBJ26313.12.700e-1826.80conserved unknown protein [Ectocarpus siliculosus][more]
XP_005768495.11.800e-1733.85hypothetical protein EMIHUDRAFT_459226 [Emiliania ... [more]
XP_005769809.11.800e-1729.41hypothetical protein EMIHUDRAFT_464205 [Emiliania ... [more]
GAX13943.15.200e-1725.97hypothetical protein FisN_5Lh150 [Fistulifera sola... [more]
CBJ48850.12.200e-1524.05conserved unknown protein [Ectocarpus siliculosus][more]
EJK71280.13.700e-1526.13hypothetical protein THAOC_07304 [Thalassiosira oc... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL158nonsL158Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR084ngnoR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004750NSK004750Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G00370.1NO17G00370.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|170801gene_7852Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100987g2gene9236Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G00370.1NO17G00370.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G00370 ID=NO17G00370|Name=NO17G00370|organism=Nannochloropsis oceanica|type=gene|length=2938bp
GGGAAAGATGTGAAGACGACGAGTATGAGTGGGTAGTAGAGAGAGGGGGT
GAGGAGGTCGACGTTGGATATTTTAGGGAGTCAAACACCAGAAAGCGCTT
GGAGGGAAAGCCCTAGTACAACTGACCGATGTCGTGGAAGAATCTAGTTT
TATCTTTGCATGTGTGTTTGCGGATATGTGTGCGCGTTCAAGAGAACCAC
GCAAATCTAGCCTTTGCCCGTCGATGACCTCTCCTCCAGCCACCCTTCCT
GCTGCGGCGGGCTCGGCCCACTTTACTTGACCGGTCGCCAACTTGGTTTT
TAGGTTACAATTTCGCACCCCTGGGTGTGGGCCATCACCGTCCTAACCAC
CCAGCGCACACAACACGGCGCTTCCCAACGACTCTTGTTGTTCATCTTCG
TAGACCTCGACCAGGAGTCCGACCGCGGGGCTGGAAGCTTGAAAAATACA
CTCTCAGAATCGTCGgttagtcaagcacgcgctcaccccccgcctcgcca
ctgttctgtctttacgtacgcgtcccatgcctcccccttctcatccctcc
cccgtccaccctcctgtcacagGCACCTATAAAGTATTTTTTAAAAGTCC
TGGACACGGGGCCGGCCCGATGGGGCGGAGCACGGCGGGCGTGCGAGGAG
CCCGCAGGGGTATTAATCCATTCCTTGTGCTCAAATGCTTTGCGGCCTTT
GGCGTGGTACAGCTCTTGGTGTTCATCAAAGTTTTTTGGACTTTTGCAGA
TAATTATTATACCGGTGCATCACATGGAGAAGGAGGAGGAGGAGAAGGGG
GCATTAGAGCAGGGTGGTTGGACGGGGGACTGAGGAGGGGAGGGCATGGC
AAGCAAGCATACGAAATGTTGTCAGCTGATGCTAGgtgagtactgaggaa
ggaaggacgaggaggggaaggagaacgagacactgcatatcttcatgagg
tcagacttgttcatggaattttgcatcctctggcttgttctcatgcatgc
aggcaatggagtggacagaggggagggagggagagctctacgtcggcagg
cgtctaattcccgtgactagacgtcttagtttaaatataccttctcacac
gcatgacgcagGGAAGGAGAAGGCTTTTTGGCAGTAGGGGATGGCAGTGG
TAAAGAGAAGGCACCGAGTTTCCACCCTCATCGTCCTCTTGTTCCCAGCC
CCCGACCCGATGATGGAAGAGCAGCAGCAGCAGCACCAGAGGGAGCAGCA
GGTGCAGCCCCAATAGACACAGAAGCAGTAACAAAAACAACAGAATATAG
AGTGGCCATGCTCCTCCCATTCATGGGCCCTGCATTTCCAACATGGTTTC
GAACCTTCGCATCGTCCTTGGCAGACAGGGCGGATGGGAGTGTGCCTCTC
GACTGGTATCTCTTCCACGAGGGCGCGCGgtaaggagggaagaagagaga
gagagggggtaggttcaagtcaatgtatcctactaggcaaggcctatttt
tccttctctcactcataagtcctaccctccttcccacccttttgctgttc
ctccctccttttctccctccattcccgcaacacctcagcctacatccctg
ccccttccctctcttcctcctcgcctcccttaccttcccacagCACTCCC
CTGGGTTTCACTCCGCCTCCCAACGTTCGTTTAATCGACCTGAGACCGGA
GGGAGGGCTGGCAAGACGCATCGTGAGAAAAGGCCGAGGAGTTCTATTTC
CGAGCAATGAGCCCGAGGGAGGGAGGGAGGAAGCGGGGGAGGGAGGGGAC
TTCGATGAAGATGCAGCGGTGGGGGTGCTGGAGGAGGCCTTGCAAATGAC
GCCGGCGCTGTTGATCCAGTTCAAGgtgcgaagggaggagggagggaggg
agggagggagggagggagggcattctagcgcatgttttcgtttcacattc
atgacattcatccttcctaccttctttccttacctcccctcctccctttt
tcatgtgtcctcccgctctccagCCCGCCCTCGGCCTCCTCTTCGCAGAC
CACCTCCTCCCTTCCCACACCCACTGGGGCTACGCCGACCTGGATATTCT
CGTCGGTCGGATTTTCGCCCCTCCGTCGCCTTCCCCCCCTCCTTCCTTCA
CCCTGACGCCCCTCGAGCTCAGCCGCCATCACATCCTTACCTTGTCGTTC
GGAGACCAATTTAGGGGGTATGTGCGAGGGCAGTTCACCCTTCATGCTCG
CCCTCTCTCCCTCCCTGCCTCCCTCCTCCTCGCCGGCTGCCCCTCTTTCC
TCCCTCCTTCCCACCCTTCCTCCCCCGACAACCACCACCCCCCCGAGGCA
CAATTTTTCTTTGAGTCGATCCGGAAGGGACGTTTGGCCCAGGCCTCTGC
TGAAGGCTGCTACAGCTACTCCCTCCTCTCTCTCGTCCTCCCTCCCTCCC
TCCCGCTCCCTCCCTCCCTCCCTCCCCTCCCTTTGTCGATAAAATACGCC
TTGGGAGCGTTTTCGGATGCATCCGACCGAGCGCATGACTTGAGGGGCAT
GGATGACGGCGGAAAGGAGGATGTGGTGGACGGGGGGAGGTTCCACGAGG
CGTTGCTGTTGCGGGATGGGAGGGTGCTGCGATGCGAGGGGAAAGGGAAA
AGCATTACCTCCTGCTTTGCCTCGCTCAACCAAGTAGAGGAGGGCAAGAG
GAAGAAACGGAAGGAGAAAGGGAACGAGGGAGGGGTGACACTGGTGCCAG
TAGAGAGGGAGGAGGAAGGGAAGGAATGCATGTGGTGGGTCCCCAGAGCC
TTCCAAGTCTGCCTCAAAAACACAACGGCTCGTGACGCCATCTACTTTGT
CAACGGCTCTTTCTTCAAGTCTACCAGGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAAGGCGGGGGGAGGTAG
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protein sequence of NO17G00370.1

>NO17G00370.1-protein ID=NO17G00370.1-protein|Name=NO17G00370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=577bp
MGRSTAGVRGARRGINPFLVLKCFAAFGVVQLLVFIKVFWTFADNYYTGA
SHGEGGGGEGGIRAGWLDGGLRRGGHGKQAYEMLSADAREGEGFLAVGDG
SGKEKAPSFHPHRPLVPSPRPDDGRAAAAAPEGAAGAAPIDTEAVTKTTE
YRVAMLLPFMGPAFPTWFRTFASSLADRADGSVPLDWYLFHEGARTPLGF
TPPPNVRLIDLRPEGGLARRIVRKGRGVLFPSNEPEGGREEAGEGGDFDE
DAAVGVLEEALQMTPALLIQFKPALGLLFADHLLPSHTHWGYADLDILVG
RIFAPPSPSPPPSFTLTPLELSRHHILTLSFGDQFRGYVRGQFTLHARPL
SLPASLLLAGCPSFLPPSHPSSPDNHHPPEAQFFFESIRKGRLAQASAEG
CYSYSLLSLVLPPSLPLPPSLPPLPLSIKYALGAFSDASDRAHDLRGMDD
GGKEDVVDGGRFHEALLLRDGRVLRCEGKGKSITSCFASLNQVEEGKRKK
RKEKGNEGGVTLVPVEREEEGKECMWWVPRAFQVCLKNTTARDAIYFVNG
SFFKSTREEEEEEEEEEEEEEEGGGR*
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Synonyms
Publications