jgi.p|Nanoce1779_2|170801, gene_7852 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|170801
Unique Namegene_7852
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_21:506324..509653 -

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Properties
Property NameValue
TranscriptId170887
ProteinId170801
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_21supercontigscaffold_21:506324..509653 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL035ncniL035Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G00370NO17G00370Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|170801mRNA_7852-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|170801mRNA_7852Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|170801

>mRNA_7852-protein ID=mRNA_7852-protein|Name=jgi.p|Nanoce1779_2|170801|organism=Nannochloropsis oceanica|type=polypeptide|length=712bp
MGVCLSTGISSTRARAYIPAPSLSSSSPPLPSHSTPLGFTPPPNVRLIDL
RPEGGLARRIVRKGRGVLFPSNEPEGGREEAGEGGDFDEDAAVGVLEEAL
QMTPALLIQFKPALGLLFADHLLPSHTHWGYADLDILVGRIFAPPSPSPP
PSFTLTPLELSRHHILTLSFGDQFRGYVRGQFTLHARPLSLPASLLLAGC
PSFLPPSHPSSPDNHHPPEAQFFFESIRKGRLAQASAEGCYSYSLLSLVL
PPSLPLPPSLPPLPLSIKYALGAFSDASDRAHDLRGMDDGGKEDVVDGGR
FHEALLLRDGRVLRCEGKGKSITSCFASLNQVEEGKRKKRKEKGNEGGVT
LVPVEREEEGKECMWWVPRAFQVCLKNTTARDAIYFVNGSFFKSTREEEE
EEEEEEEEEEEGGGEVGRRYVEGALMHFQEWKKGYPDWATPHHGLTYRGT
FITREGFVPLPYSSSSPSFPSVSLSPSSLLSPGETMMDLGPSFYCTRFLA
SAASPFPHCVERVYPSSLPPSPLPPSDAAAAAAAAAGVTAAQRARRRRAE
EERWTEKEEGEQITLLLLLPCFPPHPPHDTMQPITREEEEGGGEKGKEDL
LTQRLLAILSLWPTSAPVIIVTPYSPPPSLLPSLLLHHPFLVLLPFFEEG
EEGREGGRKKQHPVPYKALANRGLDAVQTRYVLGPVDPSKGGREEEAVRT
GVVLILLLSGK*
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Synonyms
Publications