NO16G03230, NO16G03230 (gene) Nannochloropsis oceanica

Overview
NameNO16G03230
Unique NameNO16G03230
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2009
Alignment locationchr16:964847..966855 -

Link to JBrowse

Properties
Property NameValue
DescriptionRegulator of chromosome condensation/beta-lactamase-inhibitor protein II
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:964847..966855 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens
Homology
BLAST of NO16G03230 vs. NCBI_GenBank
Match: EWM23780.1 (Regulator of chromosome condensation/beta-lactamase-inhibitor protein II [Nannochloropsis gaditana])

HSP 1 Score: 538.5 bits (1386), Expect = 2.500e-149
Identity = 301/568 (52.99%), Postives = 371/568 (65.32%), Query Frame = 0
Query:    1 MLAARASNKATTARVETSIRPLLASSFPSTTSFPC---SSSPAHHLPYHKAPLMHP--RRLRAGWIRQHGFSTSSSLNTYRPTLYTMGEGYLGSLGQGDFEPKPYLTPVATLAPYQILDFASGWDHSAVVTTCGQLFLFGRPHDVRKALSLRHMWQTFPFLVRINQAMKGIFDSPAADASTYLREDVLLLPRAFPLPPGETPLKVACSGALTAVITESGRVFCMGHNAYGQCGVGGAVLVAAVEEEGGREGGRQAPK----GQXXXXXXXXXXXXXXXXXXXXXXXXXXXEMPSCKSIKDPVVEVALGFQHALCCTRGGRAYAWGKGERGQLGNGAVVNHNSAFPIDLPVGTKVKRVASGFNHAAALTEEGKVWVWGKWQGLGMRSEG-GRGVDLYEDQLLPREVEMPGEEGGAEVVVVDVACGHFHTSLLVKAEEGGKNRWRLYMFGMRAGVRTVEP--VXXXXXXXXXXXXXXXGWRFGKGGTMVHTVVERVGGRG--GVYKAEFEGEDTRFVPVCSEEQLRGGNDEALSGNQIEGHGAAVEASTSRKKVLKYTEGLVHRLALVED 555
            M+A R   K   A   TS+ P+  SSF       C   S+ PA  L  ++     P  R+LR         + SS   +   TLY+MGEGY+G+LG GDF+ +  LTP+  LAPYQI DFA+GW H+AVV++CG+L LFGRPHDVRKALSLRHMWQ+ PFLVRI+QAMK  FDSP   ++ +LREDVLL PRAFPLP GE P++VACSGALTA+I  SGRV+CMG N +GQCGVGG VL+  V   GGREG R  P+                        XXXXXXXXX       ++DPVV++ALGFQHA+CCT  GRA+AWGKGERGQLGNG  VNHN+A  +DLP GT+V +VASGFNHAAAL E G VW+WGKWQGLG RSEG G+G +LYEDQLLPREVE+P   GG +  V DV CGHFHTS+L++ E  G   WRL+MFGMR+ +R++EP                   WRFG GG M HT++E V   G  GVYKAEF+GE T+FVPVCS+ + +G  +E                   R ++L+Y EGL+HRLAL+++
Sbjct:    1 MIALRIRQKDVLA--ATSMVPVRISSFFCLGPSSCIHHSTLPARPLRGYQVAGRFPCARKLRI------CIAYSSRRISTHTTLYSMGEGYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVSSCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRIHQAMKRFFDSPRKGSAAFLREDVLLSPRAFPLPEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPVQGLDEEEXXXXXXXXXXXXXXXRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGTRVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELP---GGVDGSVEDVGCGHFHTSVLLRGEGTGAGAWRLFMFGMRSHIRSMEPKLTPVSLPEVNLKGSGEVRWRFGTGGGMAHTLLECVDDEGVLGVYKAEFQGEWTQFVPVCSQWEAKGEGEEXXXXXXXXXXXXXXXXXXQR-RMLRYGEGLIHRLALMKE 556          
BLAST of NO16G03230 vs. NCBI_GenBank
Match: EWM23779.1 (Regulator of chromosome condensation/beta-lactamase-inhibitor protein II [Nannochloropsis gaditana])

HSP 1 Score: 528.1 bits (1359), Expect = 3.300e-146
Identity = 273/480 (56.88%), Postives = 334/480 (69.58%), Query Frame = 0
Query:   84 EGYLGSLGQGDFEPKPYLTPVATLAPYQILDFASGWDHSAVVTTCGQLFLFGRPHDVRKALSLRHMWQTFPFLVRINQAMKGIFDSPAADASTYLREDVLLLPRAFPLPPGETPLKVACSGALTAVITESGRVFCMGHNAYGQCGVGGAVLVAAVEEEGGREGGRQAPK----GQXXXXXXXXXXXXXXXXXXXXXXXXXXXEMPSCKSIKDPVVEVALGFQHALCCTRGGRAYAWGKGERGQLGNGAVVNHNSAFPIDLPVGTKVKRVASGFNHAAALTEEGKVWVWGKWQGLGMRSEG-GRGVDLYEDQLLPREVEMPGEEGGAEVVVVDVACGHFHTSLLVKAEEGGKNRWRLYMFGMRAGVRTVEP--VXXXXXXXXXXXXXXXGWRFGKGGTMVHTVVERVGGRG--GVYKAEFEGEDTRFVPVCSEEQLRGGNDEALSGNQIEGHGAAVEASTSRKKVLKYTEGLVHRLALVED 555
            +GY+G+LG GDF+ +  LTP+  LAPYQI DFA+GW H+AVV++CG+L LFGRPHDVRKALSLRHMWQ+ PFLVRI+QAMK  FDSP   ++ +LREDVLL PRAFPLP GE P++VACSGALTA+I  SGRV+CMG N +GQCGVGG VL+  V   GGREG R  P+                        XXXXXXXXX       ++DPVV++ALGFQHA+CCT  GRA+AWGKGERGQLGNG  VNHN+A  +DLP GT+V +VASGFNHAAAL E G VW+WGKWQGLG RSEG G+G +LYEDQLLPREVE+P   GG +  V DV CGHFHTS+L++ E  G   WRL+MFGMR+ +R++EP                   WRFG GG M HT++E V   G  GVYKAEF+GE T+FVPVCS+ + +G  +E                   R ++L+Y EGL+HRLAL+++
Sbjct:  158 QGYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVSSCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRIHQAMKRFFDSPRKGSAAFLREDVLLSPRAFPLPEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPVQGLDEEEXXXXXXXXXXXXXXXRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGTRVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELP---GGVDGSVEDVGCGHFHTSVLLRGEGTGAGAWRLFMFGMRSHIRSMEPKLTPVSLPEVNLKGSGEVRWRFGTGGGMAHTLLECVDDEGVLGVYKAEFQGEWTQFVPVCSQWEAKGEGEEXXXXXXXXXXXXXXXXXXQR-RMLRYGEGLIHRLALMKE 633          
BLAST of NO16G03230 vs. NCBI_GenBank
Match: XP_024578430.1 (FOG: RCC1 domain [Plasmopara halstedii] >CEG42061.1 FOG: RCC1 domain [Plasmopara halstedii])

HSP 1 Score: 164.1 bits (414), Expect = 1.300e-36
Identity = 105/332 (31.63%), Postives = 163/332 (49.10%), Query Frame = 0
Query:   67 STSSSLNTYRPTLYTMGEGYLGSLGQGDFEPKPYLTPVATLAPYQILDFASGWDHSAVVTTCGQLFLFGRPHDVRKALSLRHMWQTFPFLVRINQAMKGIFDSPAADASTYLREDVLLLPRAFPLPPGETPLKVACSGALTAVITESGRVFCMGHNAYGQCGVGGAVLVAAVEEEGGREGGRQAPKGQXXXXXXXXXXXXXXXXXXXXXXXXXXXEMPSCKSIK-DPVVEVALGFQHALCCTRGGRAYAWGKGERGQLGNGAVVNHNSAFPIDLPV--GTKVKRVASGFNHAAALTEEGKVWVWGKWQGLGMRSEGGRGVDLYEDQLLPREV 396
            ST S+ +T  P L + G+G+LG+LG G +E     TP+ T     + + + GW H+  VT+ G  +++GR H  R  +   +M +  P LV               ++ T  R    + P    LP GE   K+ CS ALT ++TESG++F +G N+YGQCG+G              E G   P                               +P+  +I  D V+++A G+QH L  TR G  + WGKGERGQLG G     N+  P +L    G K+ +V++GFNH+ A++E+G++++WGK     + +  G+ ++   DQ+ PR V
Sbjct:   21 STKSANSTRGPILMSYGDGFLGALGTGGYENVLTPTPLPTTTELSVKEISVGWAHAGFVTSDGDAYIYGRTHSFRDVIRTTNMQRVLPKLVW------------WINSFTRARGVDTMEPALLELPDGERVKKIVCSTALTFLLTESGKLFTLGANSYGQCGIG--------------EEGISVP-------------------------------LPTHVNIDGDEVIDIAAGYQHGLAVTRNGTVFCWGKGERGQLGFG---TGNADAPQELIALRGKKITKVSAGFNHSCAVSEDGELYLWGK-----LLNPKGK-IESNGDQITPRLV 286          
BLAST of NO16G03230 vs. NCBI_GenBank
Match: ETI43618.1 (hypothetical protein F443_11502 [Phytophthora parasitica P1569])

HSP 1 Score: 162.5 bits (410), Expect = 3.700e-36
Identity = 108/369 (29.27%), Postives = 167/369 (45.26%), Query Frame = 0
Query:   54 RRLRAGWIRQHGFSTSSSLNTYRPTLYTMGEGYLGSLGQGDFEPKPYLTPVATLAPYQILDFASGWDHSAVVTTCGQLFLFGRPHDVRKALSLRHMWQTFPFLVRINQAMKGIFDSPAADASTYLREDVLLLPRAFPLPPGETPLKVACSGALTAVITESGRVFCMGHNAYGQCGVGGAVLVAAVEEEGGREGGRQAPKGQXXXXXXXXXXXXXXXXXXXXXXXXXXXEMPSCKSIK-DPVVEVALGFQHALCCTRGGRAYAWGKGERGQLGNGAVVNHNSAFPIDLPVGTKVKRVASGFNHAAALTEEGKVWVWGKWQGLGMRSEGGRGVDLYEDQLLPREVEMPGEEGGAEVVVVDVACGHFHTSLL 422
            RR     +R    ST ++  +  P L + G+G+LG+LG G +E     TP+ T     + + + GW H+  +T  G  +++GR H  R  +   +M +  P LV               ++ T  R    L P    LP GE   K+ CS ALT ++TESG++F +G N YGQCG+G         EEG                                       + P+  +I  D +V++A G+QH L  T+ G  ++WGKGERGQLG G   N ++   +    G K+ +V +GFNH+ A++E+G++++WGK      ++E         DQ+ PR V            V    C  FHT+ +
Sbjct:   11 RRPALAAVRTAALSTQAASFSPSPILLSYGDGFLGALGTGGYEDVLTPTPLPTTTNLSVKEISVGWAHAGFITNGGDAYIYGRTHSFRDVIRSTNMQRVLPKLVW------------WMNSFTRARGVDTLEPALLELPDGERVKKIVCSTALTFLLTESGKLFTLGANGYGQCGIG---------EEG------------------------------------VSVQPPTHVNIDGDEIVDIAAGYQHGLAVTKNGTVFSWGKGERGQLGFG-TGNADAPQELIALTGKKIAKVGAGFNHSCAVSEDGELYLWGKLLNPKGKTESN------GDQITPRLVR-------TSDAVKLFKCSQFHTTFI 308          
BLAST of NO16G03230 vs. NCBI_GenBank
Match: ETI43619.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1569])

HSP 1 Score: 162.5 bits (410), Expect = 3.700e-36
Identity = 108/369 (29.27%), Postives = 167/369 (45.26%), Query Frame = 0
Query:   54 RRLRAGWIRQHGFSTSSSLNTYRPTLYTMGEGYLGSLGQGDFEPKPYLTPVATLAPYQILDFASGWDHSAVVTTCGQLFLFGRPHDVRKALSLRHMWQTFPFLVRINQAMKGIFDSPAADASTYLREDVLLLPRAFPLPPGETPLKVACSGALTAVITESGRVFCMGHNAYGQCGVGGAVLVAAVEEEGGREGGRQAPKGQXXXXXXXXXXXXXXXXXXXXXXXXXXXEMPSCKSIK-DPVVEVALGFQHALCCTRGGRAYAWGKGERGQLGNGAVVNHNSAFPIDLPVGTKVKRVASGFNHAAALTEEGKVWVWGKWQGLGMRSEGGRGVDLYEDQLLPREVEMPGEEGGAEVVVVDVACGHFHTSLL 422
            RR     +R    ST ++  +  P L + G+G+LG+LG G +E     TP+ T     + + + GW H+  +T  G  +++GR H  R  +   +M +  P LV               ++ T  R    L P    LP GE   K+ CS ALT ++TESG++F +G N YGQCG+G         EEG                                       + P+  +I  D +V++A G+QH L  T+ G  ++WGKGERGQLG G   N ++   +    G K+ +V +GFNH+ A++E+G++++WGK      ++E         DQ+ PR V            V    C  FHT+ +
Sbjct:   11 RRPALAAVRTAALSTQAASFSPSPILLSYGDGFLGALGTGGYEDVLTPTPLPTTTNLSVKEISVGWAHAGFITNGGDAYIYGRTHSFRDVIRSTNMQRVLPKLVW------------WMNSFTRARGVDTLEPALLELPDGERVKKIVCSTALTFLLTESGKLFTLGANGYGQCGIG---------EEG------------------------------------VSVQPPTHVNIDGDEIVDIAAGYQHGLAVTKNGTVFSWGKGERGQLGFG-TGNADAPQELIALTGKKIAKVGAGFNHSCAVSEDGELYLWGKLLNPKGKTESN------GDQITPRLVR-------TSDAVKLFKCSQFHTTFI 308          
BLAST of NO16G03230 vs. NCBI_GenBank
Match: ETP41506.1 (hypothetical protein F442_11397 [Phytophthora parasitica P10297])

HSP 1 Score: 162.5 bits (410), Expect = 3.700e-36
Identity = 110/371 (29.65%), Postives = 168/371 (45.28%), Query Frame = 0
Query:   54 RRLRAGWIRQHGFSTSSSLNTYRPTLYTMGEGYLGSLGQGDFEPKPYLTPVATLAPYQILDFASGWDHSAVVTTCGQLFLFGRPHDVRKALSLRHMWQTFPFLVRINQAMKGIFDSPAADASTYLREDVLLLPRAFPLPPGETPLKVACSGALTAVITESGRVFCMGHNAYGQCGVGGAVLVAAVEEEGGREGGRQAPKGQXXXXXXXXXXXXXXXXXXXXXXXXXXXEMPSCKSIK-DPVVEVALGFQHALCCTRGGRAYAWGKGERGQLGNGAVVNHNSAFPIDLPV--GTKVKRVASGFNHAAALTEEGKVWVWGKWQGLGMRSEGGRGVDLYEDQLLPREVEMPGEEGGAEVVVVDVACGHFHTSLL 422
            RR     +R    ST ++  +  P L + G+G+LG+LG G +E     TP+ T     + + + GW H+  +T  G  +++GR H  R  +   +M +  P LV               ++ T  R    L P    LP GE   K+ CS ALT ++TESG++F +G N YGQCG+G         EEG                                       + P+  +I  D +V++A G+QH L  T+ G  ++WGKGERGQLG G     N+  P +L    G K+ +V +GFNH+ A++E+G++++WGK      ++E         DQ+ PR V            V    C  FHT+ +
Sbjct:   11 RRPALAAVRTAALSTQAASFSPSPILLSYGDGFLGALGTGGYEDVLTPTPLPTTTNLSVKEISVGWAHAGFITNGGDAYIYGRTHSFRDVIRSTNMQRVLPKLVW------------WMNSFTRARGVDTLEPALLELPDGERVKKIVCSTALTFLLTESGKLFTLGANGYGQCGIG---------EEG------------------------------------VSVQPPTHVNIDGDEIVDIAAGYQHGLAVTKNGTVFSWGKGERGQLGFG---TGNAEAPQELIALKGKKIAKVGAGFNHSCAVSEDGELYLWGKLLNPKGKTESN------GDQITPRLVR-------TSDAVKLFKCSQFHTTFI 308          
BLAST of NO16G03230 vs. NCBI_GenBank
Match: ETP41507.1 (hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 162.5 bits (410), Expect = 3.700e-36
Identity = 110/371 (29.65%), Postives = 168/371 (45.28%), Query Frame = 0
Query:   54 RRLRAGWIRQHGFSTSSSLNTYRPTLYTMGEGYLGSLGQGDFEPKPYLTPVATLAPYQILDFASGWDHSAVVTTCGQLFLFGRPHDVRKALSLRHMWQTFPFLVRINQAMKGIFDSPAADASTYLREDVLLLPRAFPLPPGETPLKVACSGALTAVITESGRVFCMGHNAYGQCGVGGAVLVAAVEEEGGREGGRQAPKGQXXXXXXXXXXXXXXXXXXXXXXXXXXXEMPSCKSIK-DPVVEVALGFQHALCCTRGGRAYAWGKGERGQLGNGAVVNHNSAFPIDLPV--GTKVKRVASGFNHAAALTEEGKVWVWGKWQGLGMRSEGGRGVDLYEDQLLPREVEMPGEEGGAEVVVVDVACGHFHTSLL 422
            RR     +R    ST ++  +  P L + G+G+LG+LG G +E     TP+ T     + + + GW H+  +T  G  +++GR H  R  +   +M +  P LV               ++ T  R    L P    LP GE   K+ CS ALT ++TESG++F +G N YGQCG+G         EEG                                       + P+  +I  D +V++A G+QH L  T+ G  ++WGKGERGQLG G     N+  P +L    G K+ +V +GFNH+ A++E+G++++WGK      ++E         DQ+ PR V            V    C  FHT+ +
Sbjct:   11 RRPALAAVRTAALSTQAASFSPSPILLSYGDGFLGALGTGGYEDVLTPTPLPTTTNLSVKEISVGWAHAGFITNGGDAYIYGRTHSFRDVIRSTNMQRVLPKLVW------------WMNSFTRARGVDTLEPALLELPDGERVKKIVCSTALTFLLTESGKLFTLGANGYGQCGIG---------EEG------------------------------------VSVQPPTHVNIDGDEIVDIAAGYQHGLAVTKNGTVFSWGKGERGQLGFG---TGNAEAPQELIALKGKKIAKVGAGFNHSCAVSEDGELYLWGKLLNPKGKTESN------GDQITPRLVR-------TSDAVKLFKCSQFHTTFI 308          
BLAST of NO16G03230 vs. NCBI_GenBank
Match: XP_008907571.1 (hypothetical protein PPTG_13562 [Phytophthora parasitica INRA-310] >ETK83686.1 hypothetical protein L915_11197 [Phytophthora parasitica] >ETL37101.1 hypothetical protein L916_11094 [Phytophthora parasitica] >ETL90270.1 hypothetical protein L917_10995 [Phytophthora parasitica] >ETM43574.1 hypothetical protein L914_11023 [Phytophthora parasitica] >ETN07195.1 hypothetical protein PPTG_13562 [Phytophthora parasitica INRA-310] >ETO72314.1 hypothetical protein F444_11574 [Phytophthora parasitica P1976] >ETP13434.1 hypothetical protein F441_11421 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 162.2 bits (409), Expect = 4.800e-36
Identity = 110/371 (29.65%), Postives = 168/371 (45.28%), Query Frame = 0
Query:   54 RRLRAGWIRQHGFSTSSSLNTYRPTLYTMGEGYLGSLGQGDFEPKPYLTPVATLAPYQILDFASGWDHSAVVTTCGQLFLFGRPHDVRKALSLRHMWQTFPFLVRINQAMKGIFDSPAADASTYLREDVLLLPRAFPLPPGETPLKVACSGALTAVITESGRVFCMGHNAYGQCGVGGAVLVAAVEEEGGREGGRQAPKGQXXXXXXXXXXXXXXXXXXXXXXXXXXXEMPSCKSIK-DPVVEVALGFQHALCCTRGGRAYAWGKGERGQLGNGAVVNHNSAFPIDLPV--GTKVKRVASGFNHAAALTEEGKVWVWGKWQGLGMRSEGGRGVDLYEDQLLPREVEMPGEEGGAEVVVVDVACGHFHTSLL 422
            RR     +R    ST ++  +  P L + G+G+LG+LG G +E     TP+ T     + + + GW H+  +T  G  +++GR H  R  +   +M +  P LV               ++ T  R    L P    LP GE   K+ CS ALT ++TESG++F +G N YGQCG+G         EEG                                       + P+  +I  D +V++A G+QH L  T+ G  ++WGKGERGQLG G     N+  P +L    G K+ +V +GFNH+ A++E+G++++WGK      ++E         DQ+ PR V            V    C  FHT+ +
Sbjct:   11 RRPALAAVRTAALSTQAASFSPSPILLSYGDGFLGALGTGGYEDVLTPTPLPTTTNLSVKEISVGWAHAGFITNGGDAYIYGRTHSFRDVIRSTNMQRVLPKLVW------------WMNSFTRARGVDTLEPALLELPDGERVKKIVCSTALTFLLTESGKLFTLGANGYGQCGIG---------EEG------------------------------------VSVQPPTHVNIDGDEIVDIAAGYQHGLAVTKNGTVFSWGKGERGQLGFG---TGNADAPQELIALKGKKIAKVGAGFNHSCAVSEDGELYLWGKLLNPKGKTESN------GDQITPRLVR-------TSDAVKLFKCSQFHTTFI 308          
BLAST of NO16G03230 vs. NCBI_GenBank
Match: XP_008907572.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETK83687.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL37102.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL90271.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM43575.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETN07196.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETO72315.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETP13435.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 162.2 bits (409), Expect = 4.800e-36
Identity = 110/371 (29.65%), Postives = 168/371 (45.28%), Query Frame = 0
Query:   54 RRLRAGWIRQHGFSTSSSLNTYRPTLYTMGEGYLGSLGQGDFEPKPYLTPVATLAPYQILDFASGWDHSAVVTTCGQLFLFGRPHDVRKALSLRHMWQTFPFLVRINQAMKGIFDSPAADASTYLREDVLLLPRAFPLPPGETPLKVACSGALTAVITESGRVFCMGHNAYGQCGVGGAVLVAAVEEEGGREGGRQAPKGQXXXXXXXXXXXXXXXXXXXXXXXXXXXEMPSCKSIK-DPVVEVALGFQHALCCTRGGRAYAWGKGERGQLGNGAVVNHNSAFPIDLPV--GTKVKRVASGFNHAAALTEEGKVWVWGKWQGLGMRSEGGRGVDLYEDQLLPREVEMPGEEGGAEVVVVDVACGHFHTSLL 422
            RR     +R    ST ++  +  P L + G+G+LG+LG G +E     TP+ T     + + + GW H+  +T  G  +++GR H  R  +   +M +  P LV               ++ T  R    L P    LP GE   K+ CS ALT ++TESG++F +G N YGQCG+G         EEG                                       + P+  +I  D +V++A G+QH L  T+ G  ++WGKGERGQLG G     N+  P +L    G K+ +V +GFNH+ A++E+G++++WGK      ++E         DQ+ PR V            V    C  FHT+ +
Sbjct:   11 RRPALAAVRTAALSTQAASFSPSPILLSYGDGFLGALGTGGYEDVLTPTPLPTTTNLSVKEISVGWAHAGFITNGGDAYIYGRTHSFRDVIRSTNMQRVLPKLVW------------WMNSFTRARGVDTLEPALLELPDGERVKKIVCSTALTFLLTESGKLFTLGANGYGQCGIG---------EEG------------------------------------VSVQPPTHVNIDGDEIVDIAAGYQHGLAVTKNGTVFSWGKGERGQLGFG---TGNADAPQELIALKGKKIAKVGAGFNHSCAVSEDGELYLWGKLLNPKGKTESN------GDQITPRLVR-------TSDAVKLFKCSQFHTTFI 308          
BLAST of NO16G03230 vs. NCBI_GenBank
Match: KUF92107.1 (FAS-associated factor 2-B [Phytophthora nicotianae])

HSP 1 Score: 159.5 bits (402), Expect = 3.100e-35
Identity = 107/358 (29.89%), Postives = 164/358 (45.81%), Query Frame = 0
Query:   67 STSSSLNTYRPTLYTMGEGYLGSLGQGDFEPKPYLTPVATLAPYQILDFASGWDHSAVVTTCGQLFLFGRPHDVRKALSLRHMWQTFPFLVRINQAMKGIFDSPAADASTYLREDVLLLPRAFPLPPGETPLKVACSGALTAVITESGRVFCMGHNAYGQCGVGGAVLVAAVEEEGGREGGRQAPKGQXXXXXXXXXXXXXXXXXXXXXXXXXXXEMPSCKSIK-DPVVEVALGFQHALCCTRGGRAYAWGKGERGQLGNGAVVNHNSAFPIDLPV--GTKVKRVASGFNHAAALTEEGKVWVWGKWQGLGMRSEGGRGVDLYEDQLLPREVEMPGEEGGAEVVVVDVACGHFHTSLL 422
            ST ++  +  P L + G+G+LG+LG G +E     TP+ T     + + + GW H+  +T  G  +++GR H  R  +   +M +  P LV               ++ T  R    L P    LP GE   K+ CS ALT ++TESG++F +G N YGQCG+G         EEG                                       + P+  +I  D +V++A G+QH L  T+ G  ++WGKGERGQLG G     N+  P +L    G K+ +V +GFNH+ A++E+G++++WGK      ++E         DQ+ PR V            V    C  FHT+ +
Sbjct:   85 STQAASFSPSPILLSYGDGFLGALGTGGYEDVLTPTPLPTTTNLSVKEISVGWAHAGFITNGGDAYIYGRTHSFRDVIRSTNMQRVLPKLVW------------WMNSFTRARGVDTLEPALLELPDGERVKKIVCSTALTFLLTESGKLFTLGANGYGQCGIG---------EEG------------------------------------VSVQPPTHVNIDGDEIVDIAAGYQHGLAVTKNGTVFSWGKGERGQLGFG---TGNADAPQELIALKGKKIAKVGAGFNHSCAVSEDGELYLWGKLLNPKGKTESN------GDQITPRLVR-------TSDAVKLFKCSQFHTTFI 369          
The following BLAST results are available for this feature:
BLAST of NO16G03230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23780.12.500e-14952.99Regulator of chromosome condensation/beta-lactamas... [more]
EWM23779.13.300e-14656.88Regulator of chromosome condensation/beta-lactamas... [more]
XP_024578430.11.300e-3631.63FOG: RCC1 domain [Plasmopara halstedii] >CEG42061.... [more]
ETI43618.13.700e-3629.27hypothetical protein F443_11502 [Phytophthora para... [more]
ETI43619.13.700e-3629.27hypothetical protein, variant 1 [Phytophthora para... [more]
ETP41506.13.700e-3629.65hypothetical protein F442_11397 [Phytophthora para... [more]
ETP41507.13.700e-3629.65hypothetical protein, variant 1 [Phytophthora para... [more]
XP_008907571.14.800e-3629.65hypothetical protein PPTG_13562 [Phytophthora para... [more]
XP_008907572.14.800e-3629.65hypothetical protein, variant 1 [Phytophthora para... [more]
KUF92107.13.100e-3529.89FAS-associated factor 2-B [Phytophthora nicotianae... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL155nonsL155Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR032ngnoR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G03230.2NO16G03230.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO16G03230.1NO16G03230.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100330g2gene6681Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G03230.2NO16G03230.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO16G03230.1NO16G03230.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G03230 ID=NO16G03230|Name=NO16G03230|organism=Nannochloropsis oceanica|type=gene|length=2009bp
AAACCACAGCACAACCAATGCTTGCTGCCCGGGCCAGCAACAAGGCGACG
ACTGCAAGGGTGGAGACCTCGATACGGCCTCTACTTGCCTCGTCCTTCCC
ATCGACGACCTCCTTCCCCTGTAGCTCCTCGCCAGCTCATCACCTGCCCT
ATCACAAGGCACCTCTCATGCACCCTCGCCGCCTCAGGGCGGGCTGGATA
AGACAGCACGGTTTCAGCACGTCTTCGTCTTTGAATACCTATCGTCCAAC
CCTCTATACTATGGGCGAGgtatgtctcgctttcgcatctccccctctgt
ccctccagtctgcgtcgtatcgaaggtaccccgatgccctacctcaatgc
tcttttcggatcgatctagatgacgtccagccacctccttttcccttgtt
ctgcgtttatatacgacaatctgacaatcaagaggtgctaccttcttctc
tttcgctactgattctcatactggccctcatccactctatcaccttcctc
cctcccccacacacccctccttccctctttcccaacccaacgcaaacagG
GCTACCTCGGCTCGCTGGGTCAAGGGGACTTCGAGCCCAAGCCCTATCTG
ACACCTGTTGCCACCCTCGCGCCCTACCAGATCCTCGACTTCGCCTCGGG
CTGGGACCATTCAGCTGTGGTAACCACCTGTGGACAGCTCTTCCTCTTCG
GTCGGCCCCACGACGTCCGGAAAGCCCTCTCCCTCCGACACATGTGGCAG
ACCTTCCCCTTCCTTGTCCGAATCAACCAAGCTATGAAAGGTATCTTCGA
CAGCCCAGCAGCAGATGCCAGCACTTACCTGCGGGAAGACGTCCTCCTCC
TCCCTCGCGCCTTCCCCTTGCCCCCAGGGGAAACACCTCTCAAAGTGGCG
TGCTCGGGGGCTCTGACCGCCGTCATTACAGAGAGTGGGCGCGTTTTTTG
CATGGGACACAATGCCTATGGACAATGTGGGGTTGGTGGGGCCGTTCTGG
TAGCTGCGGTGGAGGAGGAGGGAGGGAGGGAGGGAGGCAGGCAGGCGCCC
AAGGGACAGAAGATGCAGAAGGCGGACGTTGCGAACGTGTGGACGCCCAT
GACACCGGTGCAAGGGCTCGAGAAGGAGGGGGAAGATGGTGAGATGCCTA
GCTGTAAGAGCATCAAGGACCCGGTGGTTGAAGTGGCCCTGGGGTTTCAG
CACGCTCTCTGTTGCACCCGGGGAGGGCGGGCCTACGCTTGGGGAAAGGG
GGAGAGGGGCCAGTTGGGAAACGGCGCGGTGGTGAACCACAACTCGGCCT
TTCCAATAGACTTGCCAGTGGGAACGAAGGTGAAGAGAGTGGCCTCGGGG
TTCAACCACGCGGCGGCCCTAACGGAGGAGGGCAAGGTGTGGGTGTGGGG
TAAATGGCAGGGGCTGGGCATGCGGAGCGAGGGGGGGCGGGGTGTGGACC
TGTACGAGGACCAGCTGCTACCGAGGGAGGTGGAGATGCCGGGGGAGGAA
GGAGGGGCCGAGGTGGTGGTGGTAGACGTGGCGTGCGGACATTTCCACAC
GAGCTTGCTGGTGAAGGCGGAGGAGGGAGGGAAAAACAGGTGGCGGCTCT
ACATGTTTGGGATGCGGGCCGGCGTGAGGACCGTGGAACCTGTTCCTACA
CCCGTGCCCTTACCGGAAGAAGATGGCGAGGAGGAGGGTGGATGGAGGTT
CGGGAAGGGTGGGACTATGGTGCACACGGTGGTGGAGCGGGTGGGAGGGA
GAGGGGGCGTGTACAAGGCGGAGTTTGAAGGGGAGGACACGCGATTCGTG
CCTGTCTGCTCGGAGGAGCAACTGCGAGGAGGAAACGACGAGGCACTGTC
GGGAAATCAAATTGAGGGGCATGGAGCTGCAGTAGAGGCATCCACGTCGA
GGAAGAAAGTACTGAAATATACGGAAGGCTTGGTACATCGGCTTGCCCTC
GTGGAGGACGTGAAGGATGTCACACAATGAGCCAAGTAATAAAAGTCTAA
TTACCATGA
back to top

protein sequence of NO16G03230.2

>NO16G03230.2-protein ID=NO16G03230.2-protein|Name=NO16G03230.2|organism=Nannochloropsis oceanica|type=polypeptide|length=495bp
MSRFRISPSVPPVCVVSKGYLGSLGQGDFEPKPYLTPVATLAPYQILDFA
SGWDHSAVVTTCGQLFLFGRPHDVRKALSLRHMWQTFPFLVRINQAMKGI
FDSPAADASTYLREDVLLLPRAFPLPPGETPLKVACSGALTAVITESGRV
FCMGHNAYGQCGVGGAVLVAAVEEEGGREGGRQAPKGQKMQKADVANVWT
PMTPVQGLEKEGEDGEMPSCKSIKDPVVEVALGFQHALCCTRGGRAYAWG
KGERGQLGNGAVVNHNSAFPIDLPVGTKVKRVASGFNHAAALTEEGKVWV
WGKWQGLGMRSEGGRGVDLYEDQLLPREVEMPGEEGGAEVVVVDVACGHF
HTSLLVKAEEGGKNRWRLYMFGMRAGVRTVEPVPTPVPLPEEDGEEEGGW
RFGKGGTMVHTVVERVGGRGGVYKAEFEGEDTRFVPVCSEEQLRGGNDEA
LSGNQIEGHGAAVEASTSRKKVLKYTEGLVHRLALVEDVKDVTQ*
back to top

protein sequence of NO16G03230.1

>NO16G03230.1-protein ID=NO16G03230.1-protein|Name=NO16G03230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=561bp
MLAARASNKATTARVETSIRPLLASSFPSTTSFPCSSSPAHHLPYHKAPL
MHPRRLRAGWIRQHGFSTSSSLNTYRPTLYTMGEGYLGSLGQGDFEPKPY
LTPVATLAPYQILDFASGWDHSAVVTTCGQLFLFGRPHDVRKALSLRHMW
QTFPFLVRINQAMKGIFDSPAADASTYLREDVLLLPRAFPLPPGETPLKV
ACSGALTAVITESGRVFCMGHNAYGQCGVGGAVLVAAVEEEGGREGGRQA
PKGQKMQKADVANVWTPMTPVQGLEKEGEDGEMPSCKSIKDPVVEVALGF
QHALCCTRGGRAYAWGKGERGQLGNGAVVNHNSAFPIDLPVGTKVKRVAS
GFNHAAALTEEGKVWVWGKWQGLGMRSEGGRGVDLYEDQLLPREVEMPGE
EGGAEVVVVDVACGHFHTSLLVKAEEGGKNRWRLYMFGMRAGVRTVEPVP
TPVPLPEEDGEEEGGWRFGKGGTMVHTVVERVGGRGGVYKAEFEGEDTRF
VPVCSEEQLRGGNDEALSGNQIEGHGAAVEASTSRKKVLKYTEGLVHRLA
LVEDVKDVTQ*
back to top
Synonyms
Publications