NO16G03000, NO16G03000 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G03000 vs. NCBI_GenBank
Match: XP_024365310.1 (symplekin-like isoform X1 [Physcomitrella patens] >PNR59712.1 hypothetical protein PHYPA_002504 [Physcomitrella patens]) HSP 1 Score: 80.9 bits (198), Expect = 6.700e-12 Identity = 55/156 (35.26%), Postives = 91/156 (58.33%), Query Frame = 0 Query: 115 KTLKEIRGGDVSYLLPVIGGLSKEDFEAALPPL--LAQDLVDAKLLKRLIIPA--GP-LTAAEVLVSLHNVDPEAAAASVDLSLRKYLDTLQQCLNMKTLFPQTAMTLALVKMVEDKDRPVPYAYMRSVILAIRAYPTLKSIVADNIVPKLVEREV 266 K L +++ D +YL+PV+ LSK++ P L L+ + A L + L A GP LT AEVL+SLH +DP + + L+K +D CL +T+F Q + L ++VE P+P +MR+VI A+ ++P+L+S V + I+ +LV +++ Sbjct: 1051 KKLYDVKFQDATYLIPVLSSLSKDEVTPIFPRLVDLSNEKFQAALARILQGSAHTGPALTPAEVLISLHGIDPHRDS----VPLKKVMDACATCLQQRTVFTQQVLAKVLNQLVE--QTPLPLLFMRTVIQAVHSFPSLESFVME-ILSRLVSKQI 1199
BLAST of NO16G03000 vs. NCBI_GenBank
Match: XP_024365323.1 (symplekin-like isoform X3 [Physcomitrella patens]) HSP 1 Score: 80.9 bits (198), Expect = 6.700e-12 Identity = 55/156 (35.26%), Postives = 91/156 (58.33%), Query Frame = 0 Query: 115 KTLKEIRGGDVSYLLPVIGGLSKEDFEAALPPL--LAQDLVDAKLLKRLIIPA--GP-LTAAEVLVSLHNVDPEAAAASVDLSLRKYLDTLQQCLNMKTLFPQTAMTLALVKMVEDKDRPVPYAYMRSVILAIRAYPTLKSIVADNIVPKLVEREV 266 K L +++ D +YL+PV+ LSK++ P L L+ + A L + L A GP LT AEVL+SLH +DP + + L+K +D CL +T+F Q + L ++VE P+P +MR+VI A+ ++P+L+S V + I+ +LV +++ Sbjct: 954 KKLYDVKFQDATYLIPVLSSLSKDEVTPIFPRLVDLSNEKFQAALARILQGSAHTGPALTPAEVLISLHGIDPHRDS----VPLKKVMDACATCLQQRTVFTQQVLAKVLNQLVE--QTPLPLLFMRTVIQAVHSFPSLESFVME-ILSRLVSKQI 1102
BLAST of NO16G03000 vs. NCBI_GenBank
Match: XP_003062021.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH53733.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 78.2 bits (191), Expect = 4.400e-11 Identity = 56/155 (36.13%), Postives = 84/155 (54.19%), Query Frame = 0 Query: 115 KTLKEIRGGDVSYLLPVIGGLSKEDFEAALPPLLAQDLVDA--KLLKRL--IIPAGPLTAAEVLVSLHNVDPEAAAASVDLSLRKYLDTLQQCLNMKTLFPQTAMTLALVKMVEDKDRPVPYAYMRSVILAIRAYPTLKSIVADNIVPKLVEREV 266 + L E GGD+ Y++P+ L K+ +L P + VDA ++L RL PA PLTA E+L++LH+VDP + L+K +D +C N +F + AL KMVE P+P +MRSVI A +A P+L+ ++ L R+V Sbjct: 1036 EALSEACGGDIKYVMPLTSSLKKDVVAKSLLPRVVGVDVDAFREVLDRLTATTPAKPLTATEILIALHDVDP----VRHGVPLKKIIDACGECFNRPDVFTPEVVAAALQKMVE--ATPLPLLFMRSVIQAEQAAPSLREFTL-GLLRTLTRRQV 1183
BLAST of NO16G03000 vs. NCBI_GenBank
Match: XP_011074295.1 (symplekin isoform X1 [Sesamum indicum]) HSP 1 Score: 78.2 bits (191), Expect = 4.400e-11 Identity = 57/156 (36.54%), Postives = 82/156 (52.56%), Query Frame = 0 Query: 115 KTLKEIRGGDVSYLLPVIGGLSKEDFEAALP-----PLLAQDLVDAKLLKRLIIPAGPLTAAEVLVSLHNVDPEAAAASVDLSLRKYLDTLQQCLNMKTLFPQTAMTLALVKMVEDKDRPVPYAYMRSVILAIRAYPTLKSIVADNIVPKLVEREV 266 K L E R D + L+P+I SK++ P PL + A +L+ LT AEVLV++H++ PE L L+K D C +T+F Q +T AL +MV+ P+P YMR+VI AI A+PTL V + I+ KLV R++ Sbjct: 1092 KGLYETRLKDATILIPIISAFSKDEVLPIFPRLVQLPLNKFQMALAHILQGSAHTGPALTPAEVLVAIHDISPEKDG----LPLKKITDACSACFEQRTVFTQQVLTKALNQMVD--RTPLPLLYMRTVIQAIDAFPTLVDFVME-ILSKLVNRQI 1240
BLAST of NO16G03000 vs. NCBI_GenBank
Match: XP_020548104.1 (symplekin isoform X2 [Sesamum indicum]) HSP 1 Score: 78.2 bits (191), Expect = 4.400e-11 Identity = 57/156 (36.54%), Postives = 82/156 (52.56%), Query Frame = 0 Query: 115 KTLKEIRGGDVSYLLPVIGGLSKEDFEAALP-----PLLAQDLVDAKLLKRLIIPAGPLTAAEVLVSLHNVDPEAAAASVDLSLRKYLDTLQQCLNMKTLFPQTAMTLALVKMVEDKDRPVPYAYMRSVILAIRAYPTLKSIVADNIVPKLVEREV 266 K L E R D + L+P+I SK++ P PL + A +L+ LT AEVLV++H++ PE L L+K D C +T+F Q +T AL +MV+ P+P YMR+VI AI A+PTL V + I+ KLV R++ Sbjct: 953 KGLYETRLKDATILIPIISAFSKDEVLPIFPRLVQLPLNKFQMALAHILQGSAHTGPALTPAEVLVAIHDISPEKDG----LPLKKITDACSACFEQRTVFTQQVLTKALNQMVD--RTPLPLLYMRTVIQAIDAFPTLVDFVME-ILSKLVNRQI 1101
BLAST of NO16G03000 vs. NCBI_GenBank
Match: XP_009109796.1 (PREDICTED: uncharacterized protein LOC103835387 isoform X1 [Brassica rapa]) HSP 1 Score: 77.8 bits (190), Expect = 5.700e-11 Identity = 57/156 (36.54%), Postives = 84/156 (53.85%), Query Frame = 0 Query: 115 KTLKEIRGGDVSYLLPVIGGLSKEDFEAALPPLL-----AQDLVDAKLLKRLIIPAGPLTAAEVLVSLHNVDPEAAAASVDLSLRKYLDTLQQCLNMKTLFPQTAMTLALVKMVEDKDRPVPYAYMRSVILAIRAYPTLKSIVADNIVPKLVEREV 266 K L E + DVS L+P++ LSK++ PPLL L A +L+ LT AEVL+++H+V PE L+K D C +T+F Q + AL +MV+ P+P +MR+VI AI A+PTL +V + I+ KLV R++ Sbjct: 1078 KHLYETKLKDVSILIPLLSSLSKDEVLPIFPPLLNLPPEKFQLALAHILQGSAHTGPALTPAEVLIAIHDVVPEKNGP----PLKKITDACSACFEQRTVFTQQVLAKALGQMVD--RTPLPLLFMRTVIQAIDAFPTLVDVVME-ILSKLVSRQI 1226
BLAST of NO16G03000 vs. NCBI_GenBank
Match: CDY11788.1 (BnaC03g57900D [Brassica napus]) HSP 1 Score: 77.4 bits (189), Expect = 7.500e-11 Identity = 56/156 (35.90%), Postives = 84/156 (53.85%), Query Frame = 0 Query: 115 KTLKEIRGGDVSYLLPVIGGLSKEDFEAALPPLL-----AQDLVDAKLLKRLIIPAGPLTAAEVLVSLHNVDPEAAAASVDLSLRKYLDTLQQCLNMKTLFPQTAMTLALVKMVEDKDRPVPYAYMRSVILAIRAYPTLKSIVADNIVPKLVEREV 266 K L E + DVS L+P++ L+K++ PPLL L A +L+ LT AEVL+++H+V PE L+K D C +T+F Q + AL +MV+ P+P +MR+VI AI A+PTL +V + I+ KLV R++ Sbjct: 1113 KHLYETKLKDVSILIPLLSSLTKDEVLPIFPPLLNLSPEKFQLALAHILQGSAHTGPALTPAEVLIAIHDVVPEKGGP----PLKKITDACSACFEQRTVFTQQVLAKALGQMVD--RTPLPLLFMRTVIQAIDAFPTLVDVVME-ILSKLVNRQI 1261
BLAST of NO16G03000 vs. NCBI_GenBank
Match: XP_024026606.1 (uncharacterized protein LOC21408219 isoform X2 [Morus notabilis]) HSP 1 Score: 76.3 bits (186), Expect = 1.700e-10 Identity = 56/156 (35.90%), Postives = 86/156 (55.13%), Query Frame = 0 Query: 115 KTLKEIRGGDVSYLLPVIGGLSKEDFEAALPPLLAQDLVDAKLLKRLIIP----AGP-LTAAEVLVSLHNVDPEAAAASVDLSLRKYLDTLQQCLNMKTLFPQTAMTLALVKMVEDKDRPVPYAYMRSVILAIRAYPTLKSIVADNIVPKLVEREV 266 K L E + DVS L+P++ LSK + P L+A L ++ I+ GP LT AEVLV++H + PE L+L+K +D C +T+F Q + AL +MV+ P+P +MR+VI +I A+P+L V + I+ KLV ++V Sbjct: 1074 KHLYETKLKDVSILIPMLPSLSKNEVLPIFPRLVALPLEKFQMALAHILQGSAHTGPALTPAEVLVAIHGIVPEKDG----LALKKIMDACSACFEQRTVFTQQVLAKALTRMVD--QTPLPLLFMRTVIQSIDAFPSLVDFVME-ILSKLVSKQV 1222
BLAST of NO16G03000 vs. NCBI_GenBank
Match: XP_013663226.1 (uncharacterized protein LOC106367907 isoform X1 [Brassica napus]) HSP 1 Score: 75.9 bits (185), Expect = 2.200e-10 Identity = 56/156 (35.90%), Postives = 83/156 (53.21%), Query Frame = 0 Query: 115 KTLKEIRGGDVSYLLPVIGGLSKEDFEAALPPLL-----AQDLVDAKLLKRLIIPAGPLTAAEVLVSLHNVDPEAAAASVDLSLRKYLDTLQQCLNMKTLFPQTAMTLALVKMVEDKDRPVPYAYMRSVILAIRAYPTLKSIVADNIVPKLVEREV 266 K L E + DVS L+P++ L+K++ PPLL L A +L+ LT AEVL+++H+V PE L+K D C +T+F Q + AL +MV P+P +MR+VI AI A+PTL +V + I+ KLV R++ Sbjct: 1066 KHLYETKLKDVSILIPLLSSLTKDEVLPIFPPLLNLPPEKFQLALAHILQGSAHTGPALTPAEVLIAIHDVVPEKNGP----PLKKITDACSACFEQRTVFTQQVLAKALGQMV--NRTPLPLLFMRTVIQAIDAFPTLVDVVME-ILSKLVSRQI 1214
BLAST of NO16G03000 vs. NCBI_GenBank
Match: XP_013663227.1 (uncharacterized protein LOC106367907 isoform X2 [Brassica napus]) HSP 1 Score: 75.9 bits (185), Expect = 2.200e-10 Identity = 56/156 (35.90%), Postives = 83/156 (53.21%), Query Frame = 0 Query: 115 KTLKEIRGGDVSYLLPVIGGLSKEDFEAALPPLL-----AQDLVDAKLLKRLIIPAGPLTAAEVLVSLHNVDPEAAAASVDLSLRKYLDTLQQCLNMKTLFPQTAMTLALVKMVEDKDRPVPYAYMRSVILAIRAYPTLKSIVADNIVPKLVEREV 266 K L E + DVS L+P++ L+K++ PPLL L A +L+ LT AEVL+++H+V PE L+K D C +T+F Q + AL +MV P+P +MR+VI AI A+PTL +V + I+ KLV R++ Sbjct: 1066 KHLYETKLKDVSILIPLLSSLTKDEVLPIFPPLLNLPPEKFQLALAHILQGSAHTGPALTPAEVLIAIHDVVPEKNGP----PLKKITDACSACFEQRTVFTQQVLAKALGQMV--NRTPLPLLFMRTVIQAIDAFPTLVDVVME-ILSKLVSRQI 1214 The following BLAST results are available for this feature:
BLAST of NO16G03000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G03000 ID=NO16G03000|Name=NO16G03000|organism=Nannochloropsis oceanica|type=gene|length=2096bpback to top protein sequence of NO16G03000.2 >NO16G03000.2-protein ID=NO16G03000.2-protein|Name=NO16G03000.2|organism=Nannochloropsis oceanica|type=polypeptide|length=268bpback to top protein sequence of NO16G03000.1 >NO16G03000.1-protein ID=NO16G03000.1-protein|Name=NO16G03000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=342bpback to top Synonyms
Publications
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