NO16G02840, NO16G02840 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G02840 vs. NCBI_GenBank
Match: XP_022091752.1 (non-structural maintenance of chromosomes element 4 homolog A-like [Acanthaster planci]) HSP 1 Score: 124.0 bits (310), Expect = 1.100e-24 Identity = 94/307 (30.62%), Postives = 151/307 (49.19%), Query Frame = 0 Query: 85 NPEERFKARQVLRAEGSALLEDAKDLADPTKKALNEGITRNDKLGEMVAH---PREAILDAENVNKLANAAKKQAESLSSTVRRYDWQAVLDGL-------RENPELRDGRGI-----NWIKLGASVAACFKNVPEIDFMLGPLEK---PVPVRKERMKRVRHADEKGPEVQPEEVTQQTEKETEDIGAVRVKAMMDVMGKTFQTNRTERSQQTTE-VDIFNFLFDPLSFTQTVENIFDVSFLVKEDKTAIQLDANGIPVVRPVSAAAASQNVRK--KTQAVLSLSMGEWKELCDVFAVSSPSVPHR 371 N E+R + RQ R + + +DL P L + R D L V REA LDA+ + +++ +QA+ L S +D + L R E + R + W KLG + +CF+ P FMLG E+ PV RK+ R + D GP V P++V Q K +++ V+ M+ ++ + TN + Q E V +F F+ +P SF++TVENIF +SFLVK+ ++LD + +P++ P + Q + + Q ++SL M +WKE+ +VF + P +P R Sbjct: 13 NHEKRRQLRQDYRNLIAETQRNRQDLIQPESDGLKNTLDRADTLFTQVTKSKCSREAALDAQLMVLVSSLGHEQAQKLHSDFHTFDPSEFAEKLITFMGDRRIRNEEGERRNVPFPKEGWSKLGRAAKSCFRRAPAFHFMLGSFERGEAPVKTRKQSAARQKEKD-SGPAVVPKQV-QSMGKSHQEVTTEEVERMLGILHQV--TNFDQEDQSEVEPVSLFEFVINPHSFSETVENIFHLSFLVKDGHAEVRLDDDRLPIIIPTTPYVEGQTNEQVDRKQVMISLDMQQWKEIVNVFEIKEPLIPRR 315
BLAST of NO16G02840 vs. NCBI_GenBank
Match: CCI47806.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 120.2 bits (300), Expect = 1.600e-23 Identity = 94/285 (32.98%), Postives = 146/285 (51.23%), Query Frame = 0 Query: 93 RQVLRAEGSALLED----AKDLADPTKKALNEGITRNDKLGEMVAHPREAILDAENVNKLANAAKKQAESL-SSTVRRYDWQAVLDGLRENPELRDGRGINWIKLGASVAACFKNVPEIDFMLGPLEKPVPVRKERMKRVRHADEKGPEVQPEEVTQQTEK-ETEDIGAVRVKAMMDVMGKTFQTNRTERSQQTTEVDIFNFLFDPLSFTQTVENIFDVSFLVKEDKTAIQLDANGIPVVRPVSAAAASQNVRKKTQAVLSLSMGEWKELCDVFAVSSPSVPHRE 372 R+ +R + +L+D AK+LA T E +++ E + +PREA LDA N+ +L A KQ++SL S+ ++YD ++ R N DG NW KLG VA+CF VPEI+F G ++ V ++ R R DE +Q TQ + K + +D A R++ M + ERS + ++F P SFTQT+EN+FDVSFLV+ I +D N P + + +++ +TQ ++SL+ +W+EL +P V RE Sbjct: 21 RRKIRCKERDILQDIRKNAKELATVTSTKFIETTEELNQVYEQICYPREANLDASNLEELNQAVVKQSQSLGSNNCQQYDATDLIRASRSN-FASDGT-FNWEKLGRKVASCFHCVPEINFFFGLMDTKVTEKQRHRSRRRRNDE---SIQTSHPTQYSAKSDRQDAQARRLETMRLAL---------ERSNRQ---NLFRVALHPQSFTQTIENLFDVSFLVRNGALEIGMDDNEAPYLEH-HESRPDESMPAQTQTIISLTPDQWEELAGAMDAEAPLVGTRE 287
BLAST of NO16G02840 vs. NCBI_GenBank
Match: XP_009062782.1 (hypothetical protein LOTGIDRAFT_235347 [Lottia gigantea] >ESO86547.1 hypothetical protein LOTGIDRAFT_235347 [Lottia gigantea]) HSP 1 Score: 117.9 bits (294), Expect = 7.700e-23 Identity = 96/322 (29.81%), Postives = 160/322 (49.69%), Query Frame = 0 Query: 59 AAACEKRTKSQKRQEQENFQKFIASKNPEERFKARQVLRAEGSALLEDAKDLADPTKKALNEGITRNDKLGEMVAHPREAILDAENVNKLANAAKKQAESLSSTVRRYDWQAVLDGLRE---NPELRDG--RGINWIKLGASVAACFKNVPEIDFMLGPLEK-PVPVRKERMKRVRHADEKGPEVQ-PEEVTQQTEKETEDIGAVRVKAMMDVMGKTFQTNRTERSQQTTEVDIFNFLFDPLSFTQTVENIFDVSFLVKEDKTAIQLDANGIPVVRPV--SAAAASQNVRKKTQAVLSLSMGEWKELCDVFAVSSPSVPHRE 372 A C+ E+ N + ++ +ER + RQ R L D DL +P LNE + + D+ + V REA LD++ + +AN +++A++L++ ++ ++ L+ L G W LGA+V FK P FM G EK V VRKER+K+VR D + P +V + + + + V+ + ++ K ++ + + F F+ +P SF QT+ENIF VSFLV++ I LD + +PV+ P+ S ++NV+ K Q ++SLS EWKE+ F ++ +PHR+ Sbjct: 14 ATDCDDEDIDLANTEENNLKYLKPIQDADERREIRQNYRKLIEDLERDKHDLINPESDELNERLKQADEYYKPVKMTREAALDSQALVMIANMGRQKAQALNTEFVKFQPVEFVEKLKTFVCGNVLETGTISTEKWSTLGAAVQPFFKRSPPFRFMNGAFEKGEVDVRKERVKKVREKDSGVDKATVPIQVQRVQDTDKMEATTAEVERIYKILEKCYEKTK------NNPLCYFEFVTNPHSFGQTIENIFYVSFLVRDGVLKISLDEDKLPVLEPIKESDKKTNKNVKNK-QVIISLSPAEWKEVVKTFNITESVIPHRK 328
BLAST of NO16G02840 vs. NCBI_GenBank
Match: XP_024580074.1 (non-structural maintenance of chromosomes element 4 homolog a [Plasmopara halstedii] >CEG43705.1 non-structural maintenance of chromosomes element 4 homolog a [Plasmopara halstedii]) HSP 1 Score: 117.5 bits (293), Expect = 1.000e-22 Identity = 86/285 (30.18%), Postives = 151/285 (52.98%), Query Frame = 0 Query: 89 RFKARQVLRAEGSALLEDAKDLADPTKKALNEGITRNDKLGEMVAHPREAILDAENVNKLANAAKKQAESL-SSTVRRYDWQAVLDGLRENPELRDGRG-INWIKLGASVAACFKNVPEIDFMLGPLEKPVPVRKERMKRVRHADEKGPEVQPEEVTQQTEKETEDIGAVRVKAMMDVMGKTFQTNRTERSQQTTEVDIFNFLFDPLSFTQTVENIFDVSFLVKEDKTAIQLDA-NGIPVVRPVSAAAASQNVRKKTQAVLSLSMGEWKELCDVFAVSSPSVPHR 371 R+K R++L+ ++ E+A DLA + + D++ + V +PREA LDA N+++L A KQ+E+L SS + +YD ++ + + G +W LG + ACF++VPE F+ G ++ V ++ + R D E QP E T +K+ +D A R++ + QT TE + +D+ + +P SFTQTVEN+FD SFLV+ + I +D +G+P ++ N+ +Q+++S++ +W++L V + P + HR Sbjct: 46 RYKERELLQ----SIKENAHDLAKLSSDQFHTHTQELDQMYDSVCYPREANLDASNLDELNVAVAKQSEALGSSDLTKYDTTDLIRAAQNVCTIESQNGEFDWNTLGNAAGACFRSVPESCFLFGLMDTEVTHKERKKARRVEEDVNAQETQPTEYT--NKKDRKDAQARRLEIL--------QTKLTEGERVKPLLDL---VINPKSFTQTVENLFDTSFLVRNNSAEIGIDGDSGLPYLKN-QEGLGEVNLPASSQSIISITPAQWEQLVRVMGRNEPLLGHR 312
BLAST of NO16G02840 vs. NCBI_GenBank
Match: CCI47805.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 116.7 bits (291), Expect = 1.700e-22 Identity = 91/279 (32.62%), Postives = 143/279 (51.25%), Query Frame = 0 Query: 93 RQVLRAEGSALLED----AKDLADPTKKALNEGITRNDKLGEMVAHPREAILDAENVNKLANAAKKQAESL-SSTVRRYDWQAVLDGLRENPELRDGRGINWIKLGASVAACFKNVPEIDFMLGPLEKPVPVRKERMKRVRHADEKGPEVQPEEVTQQTEK-ETEDIGAVRVKAMMDVMGKTFQTNRTERSQQTTEVDIFNFLFDPLSFTQTVENIFDVSFLVKEDKTAIQLDANGIPVVRPVSAAAASQNVRKKTQAVLSLSMGEWKELCDVFAVSSP 366 R+ +R + +L+D AK+LA T E +++ E + +PREA LDA N+ +L A KQ++SL S+ ++YD ++ R N DG NW KLG VA+CF VPEI+F G ++ V ++ R R DE +Q TQ + K + +D A R++ M + ERS + ++F P SFTQT+EN+FDVSFLV+ I +D N P + + +++ +TQ ++SL+ +W+EL +P Sbjct: 21 RRKIRCKERDILQDIRKNAKELATVTSTKFIETTEELNQVYEQICYPREANLDASNLEELNQAVVKQSQSLGSNNCQQYDATDLIRASRSN-FASDGT-FNWEKLGRKVASCFHCVPEINFFFGLMDTKVTEKQRHRSRRRRNDE---SIQTSHPTQYSAKSDRQDAQARRLETMRLAL---------ERSNRQ---NLFRVALHPQSFTQTIENLFDVSFLVRNGALEIGMDDNEAPYLEH-HESRPDESMPAQTQTIISLTPDQWEELAGAMDAEAP 281
BLAST of NO16G02840 vs. NCBI_GenBank
Match: XP_009863355.1 (PREDICTED: non-structural maintenance of chromosomes element 4 homolog A-like, partial [Apaloderma vittatum]) HSP 1 Score: 116.7 bits (291), Expect = 1.700e-22 Identity = 94/301 (31.23%), Postives = 140/301 (46.51%), Query Frame = 0 Query: 105 EDAKDLADPTKKALNEGITRNDKLGEMVAHPREAILDAENVNKLANAAKKQAESLSSTVRRYDWQAVLDGL---------RENPELRDGRGIN--------WIKLGASVAACFKNVPEIDFMLGPLEKPVPV---RKERMKRVRHADEKGP-----EVQPEEVTQQTEKETEDIGAVRVKAMMDVMGKTFQTNRTERSQQTTEVDIFNFLFDPLSFTQTVENIFDVSFLVKEDKTAIQLDANGIPVVRPVSAAAASQNVR---KKTQAVLSLSMGEWKELCDVFAVSSP--SVPHRENSDL 376 ++ +D+ P L E + +KL V+ REA LDA+ + +N K++A L S + +D A D L + D G++ W KLG F+ P +MLG + PV R ER K+ R +EK + E + TEKE E R+ A++ +T TN E T + F F+ DP SF +TVENIF VSFL+++ ++LD N +PV+ P ++ R + Q VLSLS EWKE+ D + ++ P S PH D+ Sbjct: 39 QNREDMLSPKSNRLTEALEEANKLFSGVSCAREAALDAQFLVLASNLGKEKANELRSEMTTFDSLAFADDLLTFMGINRIEIEDKDSDSEGVSSGYLPSNAWHKLGEEAEKYFRRAPTFHYMLGSFKSDPPVTRQRIERQKKARGGEEKRAMPAQLKKMEESPQEATEKEVE-----RILALL----QTHSTNDPE-----TPISFFEFVIDPNSFARTVENIFHVSFLIRDGFARLKLDENELPVIEPSKDDERRKDDRGAGARNQLVLSLSHQEWKEMIDAYGITEPMISPPHGNEEDM 325
BLAST of NO16G02840 vs. NCBI_GenBank
Match: CCA18531.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 115.9 bits (289), Expect = 2.900e-22 Identity = 84/277 (30.32%), Postives = 144/277 (51.99%), Query Frame = 0 Query: 93 RQVLRAEGSALLED----AKDLADPTKKALNEGITRNDKLGEMVAHPREAILDAENVNKLANAAKKQAESLSSTVRRYDWQAVLDGLRENPELRDGRGINWIKLGASVAACFKNVPEIDFMLGPLEKPVPVRKERMKRVRHADEKGPEVQPEEVTQQTEKETEDIGAVRVKAMMDVMGKTFQTNRTERSQQTTEVDIFNFLFDPLSFTQTVENIFDVSFLVKEDKTAIQLDANGIPVVRPVSAAAASQNVRKKTQAVLSLSMGEWKELCDVFAVSSP 366 R+ +R + +L+D AK+LA+ T E +++ E + PREA LDA N+ +L A KQA+SL + ++YD ++ RE+ +W KLG +VA+ F+ VPEI+F G ++ V ++ + R DE QP + + + ++ +D A R++ M M R++R D+F P SF+QTVEN+FDVSFLV+ I +D P + + +++ +TQ+++S++ +W+EL +V + P Sbjct: 21 RRKIRCKERDILQDIRKNAKELANVTSNKFIETTEELNQVYEQICFPREANLDASNLEELNQAIIKQAQSLGTIRQQYDAADLIRASRES--FASDEAFDWEKLGGTVASSFRCVPEINFFFGLMDTKVTEKQRQPTRRIRNDESIQTSQPTKYSAKNDQ--QDAQARRLETMRLAM------KRSDRQ------DLFRVALHPQSFSQTVENLFDVSFLVRNGALEIGIDDKETPYIEH-HPSRTDESMPPQTQSIISITPNQWEELANVMELEEP 280
BLAST of NO16G02840 vs. NCBI_GenBank
Match: XP_012198508.1 (hypothetical protein SPRG_04712 [Saprolegnia parasitica CBS 223.65] >KDO30811.1 hypothetical protein SPRG_04712 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 115.5 bits (288), Expect = 3.800e-22 Identity = 87/297 (29.29%), Postives = 154/297 (51.85%), Query Frame = 0 Query: 79 KFIASKNPEERFKARQVLRAEGSALLEDAKDLADPTKKALNEGITRNDKLGEMVAHPREAILDAENVNKLANAAKKQAESL-SSTVRRYDWQAVLDGLRENPELRD-GRGINWIKLGASVAACFKNVPEIDFMLGPLEKPVPVRKER--MKRVRHADEKGPEVQPEEVTQQTEKETEDIGAVRVKAMMDVMGKTFQTNRTERSQQTTEVDIFNFLFDPLSFTQTVENIFDVSFLVKEDKTAIQ-LDANGIPVVRPVSAAAASQNVRKKTQAVLSLSMGEWKELCDVFAVSSPSVPHR 371 K ++ E R K R++L + L E+ +D+ A D + E V +PREA LDA N+++ +N KQA + SS + ++D ++ ++E + G G++W +LG++V ACF + I FM G ++ V V+KE+ ++R R D E QP +++ + + ED+ AVR++ ++ + + +VD+F+ +P SF QTVEN FD+SFL++ IQ +A+ P ++ + + TQ V+++S +W+ L ++ P V HR Sbjct: 20 KITEAERREIRCKEREIL----TDLRENNRDVVQIASNAFKTKTHELDSVYERVFYPREANLDACNLDEFSNVVVKQAGLMGSSDLTKFDVADLMSAIKEKCIADERGNGLDWDRLGSAVGACFSSTIGISFMYGSMDTQV-VQKEKKTVRRRRQDDLDEVETQPTQISGENRPDKEDVQAVRLQKLVKTL-----------KRSAKKVDVFDLCVNPESFAQTVENFFDMSFLIRNGHAKIQRANASAAPTIQN-HDGINDEELPPSTQCVITISYKQWEALSKIY--RDPLVGHR 297
BLAST of NO16G02840 vs. NCBI_GenBank
Match: XP_006001805.2 (PREDICTED: non-structural maintenance of chromosomes element 4 homolog A-like [Latimeria chalumnae] >XP_006001806.2 PREDICTED: non-structural maintenance of chromosomes element 4 homolog A-like [Latimeria chalumnae] >XP_014347348.1 PREDICTED: non-structural maintenance of chromosomes element 4 homolog A-like [Latimeria chalumnae] >XP_014347349.1 PREDICTED: non-structural maintenance of chromosomes element 4 homolog A-like [Latimeria chalumnae]) HSP 1 Score: 115.2 bits (287), Expect = 5.000e-22 Identity = 91/309 (29.45%), Postives = 151/309 (48.87%), Query Frame = 0 Query: 85 NPEERFKARQVLRAEGSALLEDAKDLADPTKKALNEGITRNDKLGEMVAHPREAILDAENVNKLANAAKKQAESLSSTVRRYDWQAV------------LDGLRENPELRDGRG-----INWIKLGASVAACFKNVPEIDFMLGPLEKPVPVRKERMKRVR-HADEKGPEVQPE-----EVTQQ--TEKETEDIGAVRVKAMMDVMGKTFQTNRTERSQQ-TTEVDIFNFLFDPLSFTQTVENIFDVSFLVKEDKTAIQLDANGIPVVRPVSAAAASQNVRKKTQAVLSLSMGEWKELCDVFAVSSPSV 368 +P+ R R R +++ ++ D+ +PT L E + +KL V REA LDA+ + +N K++A L S + +D A LDG + E + G W KLG FK P +MLG + P ++R++R R A + + P E +QQ TEKE E R+ A++ ++ SQ +T + +F+F+ DP SF +TVENIF VSF+V++ AI+LD + +P++ P+S A + + QAV+SLS +W+++ + F ++ + Sbjct: 38 DPDTRRIIRHQYRELINSVQQNRMDMLNPTSNKLTEALEEANKLFNNVNQAREAALDAQFLVLASNLGKEKANQLHSDMTVFDPAAFVEDLLTFMGLNRLDGYESDSEDDNSVGGFLPNDAWYKLGKEADKYFKRAPVFHYMLGSFKADPPAPRQRIERQRKDASTEEQRMMPAQLKKMEASQQEATEKEVE-----RILALL----------QSYHSQDPSTPIPLFDFVIDPKSFARTVENIFHVSFIVRDGFAAIKLDKDKLPIIEPISGDAGKDTTQVRNQAVISLSKQDWRDIIETFEITEAMI 331
BLAST of NO16G02840 vs. NCBI_GenBank
Match: XP_020389443.1 (non-structural maintenance of chromosomes element 4 homolog A [Rhincodon typus] >XP_020389444.1 non-structural maintenance of chromosomes element 4 homolog A [Rhincodon typus]) HSP 1 Score: 114.4 bits (285), Expect = 8.500e-22 Identity = 84/313 (26.84%), Postives = 147/313 (46.96%), Query Frame = 0 Query: 85 NPEERFKARQVLRAEGSALLEDAKDLADPTKKALNEGITRNDKLGEMVAHPREAILDAENVNKLANAAKKQAESLSSTVRRYDWQAVLDGLRENPELRDGRGIN---------------------WIKLGASVAACFKNVPEIDFMLGPLEKPVPVRKERMKRVRHADEKGP-EVQPEEVTQQTEKETEDIGAVRVKAMMDVMGKTFQTNRTERSQQTTEVDIFNFLFDPLSFTQTVENIFDVSFLVKEDKTAIQLDANGIPVVRPVSAAAASQN-VRKKTQAVLSLSMGEWKELCDVFAVSSPSVPHRENSD 375 +P R R R +++ ++ +D+ P L E + +KL V REA LDA+ + N +++A L + + +D + EL G+N W KLG FK P FMLG + PV ++R +R + A K + P ++ + E ++ V+ ++ ++ + F +S T ++ F+F+ DP S+ +TVENIF VSF+V++ AI LD + +P++ PV+ A ++ +++ Q V+SLS EWKE+ D F ++ +P + D Sbjct: 70 DPNRRRMLRHQYRELINSVQQNREDMIRPNSNKLTEALEEANKLFSNVRQTREAALDAQFLVLATNLGQEKANQLHTDMMVFDPSVFAE------ELLTFMGLNRLETEGSDDDDESAGWLPKDAWTKLGKEAEKYFKRAPAFHFMLGSFKSEPPVPRQRTERQKRAPTKEEHRIMPTQLKKMDESH-QEATEKEVERILGLLQEYF------KSDPETPINFFDFVIDPHSYARTVENIFHVSFIVRDGFAAIGLDQDKLPIIEPVNEAVDNERPQQQRQQTVISLSQQEWKEIIDTFEIADAMIPPSKQGD 369 The following BLAST results are available for this feature:
BLAST of NO16G02840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G02840 ID=NO16G02840|Name=NO16G02840|organism=Nannochloropsis oceanica|type=gene|length=2814bpback to top protein sequence of NO16G02840.1 >NO16G02840.1-protein ID=NO16G02840.1-protein|Name=NO16G02840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=415bpback to top Synonyms
Publications
|