NO16G02670, NO16G02670 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G02670 vs. NCBI_GenBank
Match: XP_005854603.1 (nucleoside-diphosphate kinase [Nannochloropsis gaditana CCMP526] >EKU21755.1 nucleoside-diphosphate kinase [Nannochloropsis gaditana CCMP526] >EWM23836.1 nucleoside diphosphate kinase [Nannochloropsis gaditana]) HSP 1 Score: 360.9 bits (925), Expect = 2.900e-96 Identity = 180/211 (85.31%), Postives = 191/211 (90.52%), Query Frame = 0
Query: 21 MATLRLLTLCAIVSTALAFVAMGPPSRHTAAA-TTRPTFTAWGSRGHTSSVKSLGAGRGLCMAMERTYIMAKPDAVQRGIISDIVGRFEKKGYKLVALKLVKPPRSLLEEHYESLKDKPFFPKLMEYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDTVENAEREIKLWFGEGTIDWASHSQDWIYE 231
M LRL++LCAIVSTAL+FVA GPPSRHT AA T RPTF AWG+R S SL RGLCMAMERTYIMAKPDAVQRG++SDI+GRFEKKGYKLVALKLVKP RSLLEEHY+SLKDK FFP LM+YMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSD+VENAEREIKLWFGEGTIDW+SHSQ WIYE
Sbjct: 1 MEMLRLVSLCAIVSTALSFVATGPPSRHTTAAPTARPTFAAWGTRVVPSRSMSLHGSRGLCMAMERTYIMAKPDAVQRGLVSDIIGRFEKKGYKLVALKLVKPARSLLEEHYDSLKDKAFFPSLMDYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDSVENAEREIKLWFGEGTIDWSSHSQGWIYE 211
BLAST of NO16G02670 vs. NCBI_GenBank
Match: CEM29630.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 241.1 bits (614), Expect = 3.400e-60 Identity = 110/151 (72.85%), Postives = 132/151 (87.42%), Query Frame = 0
Query: 81 MAMERTYIMAKPDAVQRGIISDIVGRFEKKGYKLVALKLVKPPRSLLEEHYESLKDKPFFPKLMEYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDTVENAEREIKLWFGEGTI-DWASHSQDWIYE 231
MAMERTYIM KPD VQR ++ DIVGRFE KGY+LV +K+V+P RSLLE+HY+SLK+KPFFPKLM+YM+SGPV+AMVW GK+VVATGR MLGATNPL+SAPGTIRGD++I+VGRNI HGSD+VE+AEREI LWF + + W HS DW+YE
Sbjct: 1 MAMERTYIMVKPDGVQRKVVGDIVGRFESKGYQLVGMKMVQPDRSLLEDHYDSLKEKPFFPKLMDYMSSGPVIAMVWSGKDVVATGRKMLGATNPLDSAPGTIRGDYAIDVGRNIIHGSDSVESAEREIGLWFTDDELMSWQDHSHDWVYE 151
BLAST of NO16G02670 vs. NCBI_GenBank
Match: XP_002176701.1 (nucleoside diphosphate kinase 1 [Phaeodactylum tricornutum CCAP 1055/1] >EEC51164.1 nucleoside diphosphate kinase 1 [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 233.8 bits (595), Expect = 5.400e-58 Identity = 112/150 (74.67%), Postives = 123/150 (82.00%), Query Frame = 0
Query: 82 AMERTYIMAKPDAVQRGIISDIVGRFEKKGYKLVALKLVKPPRSLLEEHYESLKDKPFFPKLMEYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDTVENAEREIKLWFGEGTI-DWASHSQDWIYE 231
A ERTYIM KPD +QRGI+ +IV RFE KGYKLVA+K + LLE HY+ L DKPFFPKL EYM SGPVV+MVWEGK V+TGR MLGATNPLESAPGTIRGDF IEVGRNICHGSD+VENAE+EI LWF E I DW SHS+DWIYE
Sbjct: 3 ASERTYIMIKPDGIQRGIVGNIVNRFETKGYKLVAMKTKQATSELLETHYKDLVDKPFFPKLKEYMMSGPVVSMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEVGRNICHGSDSVENAEKEIALWFEEDEILDWESHSKDWIYE 152
BLAST of NO16G02670 vs. NCBI_GenBank
Match: GAX09986.1 (nucleoside-diphosphate kinase [Fistulifera solaris]) HSP 1 Score: 233.4 bits (594), Expect = 7.000e-58 Identity = 113/165 (68.48%), Postives = 127/165 (76.97%), Query Frame = 0
Query: 67 TSSVKSLGAGRGLCMAMERTYIMAKPDAVQRGIISDIVGRFEKKGYKLVALKLVKPPRSLLEEHYESLKDKPFFPKLMEYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDTVENAEREIKLWFGEG-TIDWASHSQDWIYE 231
T V S + L MAMERTYIM KPD VQRGI+ +I+ RFE KGYKLVA+K + LLE+HY L KPFFPKL +YM SGPVV+MVWEGK V+TGR MLGATNPLESAPGTIRGDF IEVGRNICHGSD+VENA +EI LWF E +DW SHSQ W+YE
Sbjct: 22 TPFVSSPRSVNSLSMAMERTYIMIKPDGVQRGIVGNIISRFETKGYKLVAMKTRMATKELLEKHYADLTSKPFFPKLRDYMLSGPVVSMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEVGRNICHGSDSVENANKEIALWFDESEVLDWESHSQSWLYE 186
BLAST of NO16G02670 vs. NCBI_GenBank
Match: GAX14516.1 (nucleoside-diphosphate kinase [Fistulifera solaris]) HSP 1 Score: 233.0 bits (593), Expect = 9.100e-58 Identity = 114/165 (69.09%), Postives = 127/165 (76.97%), Query Frame = 0
Query: 67 TSSVKSLGAGRGLCMAMERTYIMAKPDAVQRGIISDIVGRFEKKGYKLVALKLVKPPRSLLEEHYESLKDKPFFPKLMEYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDTVENAEREIKLWFGEG-TIDWASHSQDWIYE 231
T V S + L MAMERTYIM KPD VQRGI+ +IV RFE KGYKLVA+K + LLE+HY L KPFFPKL +YM SGPVV+MVWEGK V+TGR MLGATNPLESAPGTIRGDF IEVGRNICHGSD+VENA +EI LWF E +DW SHSQ W+YE
Sbjct: 22 TPFVSSPRSVYSLSMAMERTYIMIKPDGVQRGIVGNIVSRFETKGYKLVAMKTRMATKELLEKHYADLTSKPFFPKLRDYMLSGPVVSMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEVGRNICHGSDSVENANKEIALWFDESEVLDWESHSQSWLYE 186
BLAST of NO16G02670 vs. NCBI_GenBank
Match: OEU21254.1 (putative nucleoside-diphosphate kinase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 229.2 bits (583), Expect = 1.300e-56 Identity = 111/167 (66.47%), Postives = 126/167 (75.45%), Query Frame = 0
Query: 68 SSVKSLGAGRGLCMAM---ERTYIMAKPDAVQRGIISDIVGRFEKKGYKLVALKLVKPPRSLLEEHYESLKDKPFFPKLMEYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDTVENAEREIKLWFGEGTI-DWASHSQDWIYE 231
S V LG G M M ERTYIM KPD VQRGI+ +I+ RFE KGYKL A+K + + LLE HY L +KPFFPK+ +YM SGPVV MVWEGK V+TGR MLGATNPLES PGTIRGD+ IEVGRNICHGSD+VENAE+EI LWF EG + DW HS+DWIYE
Sbjct: 9 SVVGFLGVAHGFSMTMNSAERTYIMIKPDGVQRGIVGNIISRFETKGYKLSAMKTKEASKELLETHYSDLVEKPFFPKMRDYMMSGPVVCMVWEGKEAVSTGRKMLGATNPLESNPGTIRGDYCIEVGRNICHGSDSVENAEKEIALWFEEGEVMDWTCHSKDWIYE 175
BLAST of NO16G02670 vs. NCBI_GenBank
Match: XP_002291121.1 (nucleoside diphosphate kinase [Thalassiosira pseudonana CCMP1335] >EED91228.1 nucleoside diphosphate kinase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 226.1 bits (575), Expect = 1.100e-55 Identity = 107/150 (71.33%), Postives = 121/150 (80.67%), Query Frame = 0
Query: 82 AMERTYIMAKPDAVQRGIISDIVGRFEKKGYKLVALKLVKPPRSLLEEHYESLKDKPFFPKLMEYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDTVENAEREIKLWFGEG-TIDWASHSQDWIYE 231
A ERTYIM KPD VQRGI+ +I+ RFE KGYKLVALK + + LL+ HY L +KPFFPKL +YM SGPVV+M+WEGK VATGR MLGATNPL S PGTIRGDF IEVGRNICHGSD+VENAE+EI LWF E +DW SHS+DWIYE
Sbjct: 3 ASERTYIMIKPDGVQRGIVGNIISRFETKGYKLVALKTKQATKELLDTHYCDLVEKPFFPKLRDYMMSGPVVSMIWEGKEAVATGRKMLGATNPLASEPGTIRGDFCIEVGRNICHGSDSVENAEKEIALWFEESELLDWESHSKDWIYE 152
BLAST of NO16G02670 vs. NCBI_GenBank
Match: XP_016276682.1 (nucleoside-diphosphate kinase [Rhodotorula toruloides NP11] >EMS25563.1 nucleoside-diphosphate kinase [Rhodotorula toruloides NP11] >CDR47658.1 RHTO0S15e00298g1_1 [Rhodotorula toruloides]) HSP 1 Score: 223.8 bits (569), Expect = 5.600e-55 Identity = 101/148 (68.24%), Postives = 120/148 (81.08%), Query Frame = 0
Query: 83 MERTYIMAKPDAVQRGIISDIVGRFEKKGYKLVALKLVKPPRSLLEEHYESLKDKPFFPKLMEYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDTVENAEREIKLWFGEGTIDWASHSQDWIYE 231
ME+TYIM KPD VQRG++ +I+ RFEK+GYKLVA+KL P LE+HYE LK+KPFF L+ YM SGPVVAMVWEGK+ V TGRT+LGATNPL SAPGTIRGDF+I+VGRN+CHGSD VE+A++EI LWF EG W S Q W+YE
Sbjct: 1 MEQTYIMIKPDGVQRGLVGEIISRFEKRGYKLVAMKLASPSVEHLEKHYEDLKEKPFFKGLVSYMASGPVVAMVWEGKDAVKTGRTILGATNPLASAPGTIRGDFAIDVGRNVCHGSDAVESAKKEIALWFPEGLAQWTSAQQTWVYE 148
BLAST of NO16G02670 vs. NCBI_GenBank
Match: XP_005821755.1 (hypothetical protein GUITHDRAFT_80303 [Guillardia theta CCMP2712] >EKX34775.1 hypothetical protein GUITHDRAFT_80303 [Guillardia theta CCMP2712]) HSP 1 Score: 219.5 bits (558), Expect = 1.000e-53 Identity = 99/147 (67.35%), Postives = 117/147 (79.59%), Query Frame = 0
Query: 84 ERTYIMAKPDAVQRGIISDIVGRFEKKGYKLVALKLVKPPRSLLEEHYESLKDKPFFPKLMEYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDTVENAEREIKLWFGEGTIDWASHSQDWIYE 231
ERT+IM KPDAVQRG++ +I+ RFE+KG+KLVALK+V+ LL +HY+ L KPFFP LM YMTSGPVV MVWEG VV GRT+LGAT P ESAPGT+RGD++I+VGRN+CHGSD VE A REI LWF EG W SHS+ WIYE
Sbjct: 5 ERTFIMVKPDAVQRGLVGNIITRFEQKGFKLVALKMVQADEELLRQHYKDLVSKPFFPSLMSYMTSGPVVPMVWEGDGVVKAGRTILGATKPSESAPGTVRGDYAIDVGRNVCHGSDAVETAVREISLWFPEGVTKWDSHSESWIYE 151
BLAST of NO16G02670 vs. NCBI_GenBank
Match: XP_013326225.1 (Nucleoside-diphosphate kinase [Rasamsonia emersonii CBS 393.64] >KKA19613.1 Nucleoside-diphosphate kinase [Rasamsonia emersonii CBS 393.64]) HSP 1 Score: 219.5 bits (558), Expect = 1.000e-53 Identity = 101/151 (66.89%), Postives = 123/151 (81.46%), Query Frame = 0
Query: 81 MAMERTYIMAKPDAVQRGIISDIVGRFEKKGYKLVALKLVKPPRSLLEEHYESLKDKPFFPKLMEYMTSGPVVAMVWEGKNVVATGRTMLGATNPLESAPGTIRGDFSIEVGRNICHGSDTVENAEREIKLWFGEGTIDWASHSQ-DWIYE 231
M+ E+T+I KPD VQRG+I I+ RFE++G+KLVA+KLV P R LLE+HY L DKPFFP L+ YM SGP+VAMVWEG++VV TGR +LGATNPL SAPGTIRGD++I+VGRN+CHGSD+VENA++EI LWF E I HSQ DWIYE
Sbjct: 1 MSNEQTFIAIKPDGVQRGLIGPIISRFEQRGFKLVAMKLVSPSRELLEKHYSELADKPFFPGLLSYMLSGPIVAMVWEGRDVVKTGRAILGATNPLASAPGTIRGDYAIDVGRNVCHGSDSVENAKKEIALWFNENEIQQYKHSQFDWIYE 151 The following BLAST results are available for this feature:
BLAST of NO16G02670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G02670 ID=NO16G02670|Name=NO16G02670|organism=Nannochloropsis oceanica|type=gene|length=2173bpback to top protein sequence of NO16G02670.2 >NO16G02670.2-protein ID=NO16G02670.2-protein|Name=NO16G02670.2|organism=Nannochloropsis oceanica|type=polypeptide|length=244bpback to top protein sequence of NO16G02670.1 >NO16G02670.1-protein ID=NO16G02670.1-protein|Name=NO16G02670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=231bpback to top Synonyms
Publications
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