NO16G02620, NO16G02620 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G02620 vs. NCBI_GenBank
Match: XP_005853781.1 (hypothetical protein NGA_0459200 [Nannochloropsis gaditana CCMP526] >EKU22581.1 hypothetical protein NGA_0459200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 132.9 bits (333), Expect = 4.400e-28 Identity = 64/78 (82.05%), Postives = 72/78 (92.31%), Query Frame = 0 Query: 1 MAFTLWSLYKSGLLFINGVAVLHRKRFLRKYGLDVAESSDATSIKTQIIGLLNAIQYLKVPLITLNIATVMVELLFGG 79 MAFT+WSLYKSGLLF NGVAVLHRKRFLRKYGLDVAE +D TSI+ Q++GLLNA+QYLKVPLI LNI TV++ELLFGG Sbjct: 1 MAFTIWSLYKSGLLFTNGVAVLHRKRFLRKYGLDVAEVADTTSIRNQVVGLLNAVQYLKVPLIALNIVTVVIELLFGG 78
BLAST of NO16G02620 vs. NCBI_GenBank
Match: XP_012206288.1 (hypothetical protein SPRG_11844 [Saprolegnia parasitica CBS 223.65] >KDO22997.1 hypothetical protein SPRG_11844 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 77.8 bits (190), Expect = 1.700e-11 Identity = 36/75 (48.00%), Postives = 53/75 (70.67%), Query Frame = 0 Query: 5 LWSLYKSGLLFINGVAVLHRKRFLRKYGLDVAESSD--ATSIKTQIIGLLNAIQYLKVPLITLNIATVMVELLFG 78 +W L S LL +N +A+LH KRFLR+YG D E+S + S+K Q++G L A+QYL++PL+ +NI + +ELL G Sbjct: 4 IWKLIMSSLLSVNALAILHEKRFLRRYGYDQLEASSGGSPSMKNQVVGFLVAVQYLRMPLVVINIVAIFLELLMG 78
BLAST of NO16G02620 vs. NCBI_GenBank
Match: GAX99184.1 (Hypothetical protein PINS_007043 [Pythium insidiosum]) HSP 1 Score: 77.0 bits (188), Expect = 2.900e-11 Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = 0 Query: 5 LWSLYKSGLLFINGVAVLHRKRFLRKYGLDVAESSDATSIKTQIIGLLNAIQYLKVPLITLNIATVMVELLFG 78 LW + S LL N V +LH KRFLRKYG D + S +I+ QI+G L A+QYL+VPLI +N ++++L+ G Sbjct: 4 LWGFFLSSLLLTNAVCILHEKRFLRKYGWDKVDPSQGMTIRNQIVGFLVAVQYLRVPLIVVNALMILLQLVMG 76
BLAST of NO16G02620 vs. NCBI_GenBank
Match: XP_008608353.1 (hypothetical protein SDRG_04456 [Saprolegnia diclina VS20] >EQC38026.1 hypothetical protein SDRG_04456 [Saprolegnia diclina VS20]) HSP 1 Score: 76.6 bits (187), Expect = 3.700e-11 Identity = 35/75 (46.67%), Postives = 53/75 (70.67%), Query Frame = 0 Query: 5 LWSLYKSGLLFINGVAVLHRKRFLRKYGLDVAESSD--ATSIKTQIIGLLNAIQYLKVPLITLNIATVMVELLFG 78 +W L + LL +N +A+LH KRFLR+YG D E+S + S+K Q++G L A+QYL++PL+ +NI + +ELL G Sbjct: 4 IWKLIMTSLLSVNALAILHEKRFLRRYGYDQLEASSGGSPSMKNQVVGFLVAVQYLRMPLVVINIVAIFLELLMG 78
BLAST of NO16G02620 vs. NCBI_GenBank
Match: OAO13212.1 (Yos1-like protein [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 73.6 bits (179), Expect = 3.200e-10 Identity = 35/75 (46.67%), Postives = 55/75 (73.33%), Query Frame = 0 Query: 4 TLWSLYKSGLLFINGVAVLHRKRFLRKYGLDVAESS-DATSIKTQIIGLLNAIQYLKVPLITLNIATVMVELLFG 78 +LW+L K+ LLF+N +A+LH KRFL+KYG DV ++S + IK Q I LL A+++L+VPLI +N ++++ + G Sbjct: 3 SLWNLIKAVLLFVNALAILHEKRFLKKYGWDVVDASYGSNPIKNQCISLLQAVRWLRVPLIFVNFIFIVIDAITG 77
BLAST of NO16G02620 vs. NCBI_GenBank
Match: XP_022841286.1 (Yos1-like [Ostreococcus tauri] >CEG01983.1 Yos1-like [Ostreococcus tauri]) HSP 1 Score: 73.2 bits (178), Expect = 4.100e-10 Identity = 39/78 (50.00%), Postives = 54/78 (69.23%), Query Frame = 0 Query: 4 TLWSLYKSGLLFINGVAVLHRKRFLRKYGLDVAE----SSDATSIKTQIIGLLNAIQYLKVPLITLNIATVMVELLFG 78 TLW+L +S LL +N VAVL+ +RFL K GL + S+ ATS + QIIG++NA YL+VPLI LN + V+++FG Sbjct: 2 TLWTLTQSALLSVNAVAVLNERRFLAKRGLTMESIRDGSTSATSARGQIIGVINAASYLRVPLIALNAIVIFVKVVFG 79
BLAST of NO16G02620 vs. NCBI_GenBank
Match: OQR88214.1 (hypothetical protein ACHHYP_07054 [Achlya hypogyna]) HSP 1 Score: 73.2 bits (178), Expect = 4.100e-10 Identity = 33/75 (44.00%), Postives = 52/75 (69.33%), Query Frame = 0 Query: 5 LWSLYKSGLLFINGVAVLHRKRFLRKYGLDVAESSDAT--SIKTQIIGLLNAIQYLKVPLITLNIATVMVELLFG 78 +W L S LL +N +A+LH KRFLR+YG E ++ + ++K Q++G L A+QYL++PL+ +NI + +ELL G Sbjct: 4 IWKLIMSSLLSVNALAILHEKRFLRRYGYHQLEPNEGSTPTMKNQVVGFLVAVQYLRMPLVVINIVAIFLELLMG 78
BLAST of NO16G02620 vs. NCBI_GenBank
Match: CBJ30492.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 72.8 bits (177), Expect = 5.400e-10 Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = 0 Query: 5 LWSLYKSGLLFINGVAVLHRKRFLRKYGLD-VAESSDATSIKTQIIGLLNAIQYLKVPLITLNIATVMVELL 76 LW L+K+GLL N V +LH++RFLRKY LD V S A+++K Q++GL+ A+ YL+ PLI LN T ++ +L Sbjct: 8 LWKLFKAGLLATNAVTILHKQRFLRKYRLDEVDHSPSASAMKNQVVGLIAAVAYLRGPLIVLNSLTCVIAML 79
BLAST of NO16G02620 vs. NCBI_GenBank
Match: XP_014218203.1 (immediate early response 3-interacting protein 1 [Copidosoma floridanum]) HSP 1 Score: 72.8 bits (177), Expect = 5.400e-10 Identity = 37/82 (45.12%), Postives = 58/82 (70.73%), Query Frame = 0 Query: 1 MAFTLWSLYKSGLLFINGVAVLHRKRFLRKYG----LDVAESSDATSIKTQIIGLLNAIQ-YLKVPLITLNIATVMVELLFG 78 MAFTLWSLY++ +L +N V +LH +RFLRKYG +V + S+K+Q++ LL +I+ +++PLI NI T+ ++L+FG Sbjct: 1 MAFTLWSLYEATILVLNAVCILHEERFLRKYGWGANQNVQGFGEPPSVKSQLMHLLRSIRTVVRIPLIFFNIVTIFIKLIFG 82
BLAST of NO16G02620 vs. NCBI_GenBank
Match: XP_005650679.1 (Yos1-like protein [Coccomyxa subellipsoidea C-169] >EIE26135.1 Yos1-like protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 72.8 bits (177), Expect = 5.400e-10 Identity = 37/81 (45.68%), Postives = 57/81 (70.37%), Query Frame = 0 Query: 4 TLWSLYKSGLLFINGVAVLHRKRFLRKYGLDVAESSDAT-------SIKTQIIGLLNAIQYLKVPLITLNIATVMVELLFG 78 +LW+L ++ LLF+NG+A+L+ +RFL KYG ++ S + +IK Q IGLL+A+ YL+VPLI +N ++V+LLFG Sbjct: 2 SLWTLLQAVLLFVNGLAILNNERFLEKYGWGFSQMSGNSGIGPGPGAIKQQTIGLLHAVAYLRVPLIAVNALVILVKLLFG 82 The following BLAST results are available for this feature:
BLAST of NO16G02620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G02620 ID=NO16G02620|Name=NO16G02620|organism=Nannochloropsis oceanica|type=gene|length=686bpback to top protein sequence of NO16G02620.1 >NO16G02620.1-protein ID=NO16G02620.1-protein|Name=NO16G02620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=79bpback to top Synonyms
Publications
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