NO16G02590, NO16G02590 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G02590 vs. NCBI_GenBank
Match: GBG25187.1 (1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneamino imidazole-4-carboxamide isomerase [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 298.1 bits (762), Expect = 2.500e-77 Identity = 147/240 (61.25%), Postives = 187/240 (77.92%), Query Frame = 0 Query: 1 MVFRPCIDLHAGKVKQIVGSSLTGNDAALV--TNFEAKMSAEDFAKMYQSDDLKGGHVIMLGDGCEEAALAALRAYPGGLQIGGGVTPESAQRYVDAGASHVIVTSYLFSGKELDFEKLKKMEGVVGKEKLVVDLSCRRKAEDGPEGPYYVVKDKWQTYTDFQINRENLAKLSKHCDEFLVHGVDVEGLKVGILEDLVVLLGDISPLPVTYAGGARSIEDLQRVTELGRGKVRTCTSSSV 239 M FRPCIDLH G VKQIVG +LT +DA TNF + SA +FA +YQ D L+GGHVIMLG G EEAAL AL A+P G+ +GGGVTPE+AQ+Y+DAGASHVIVTSY+F +DF+KL ++E VGKE+LV+DLSCRR++ +G Y+VV D+WQ +TD++I +ENL L++HC EFLVHGVDVEGL+VGI+ +LV +LG SP+PVTYAGGARS+EDL+ V LGRG+V S++ Sbjct: 1 MKFRPCIDLHEGCVKQIVGGTLT-DDAGKTPETNFTSDKSAGNFAALYQEDGLQGGHVIMLGKGNEEAALEALGAFPDGMHVGGGVTPENAQKYLDAGASHVIVTSYVFRDGTIDFDKLHELESAVGKERLVLDLSCRRRSNEGESPRYFVVTDRWQKFTDYEITQENLETLAQHCSEFLVHGVDVEGLRVGIIGELVEMLGRWSPIPVTYAGGARSVEDLELVKLLGRGRVDLTIGSAL 239
BLAST of NO16G02590 vs. NCBI_GenBank
Match: CBJ26916.1 (1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase [Ectocarpus siliculosus]) HSP 1 Score: 297.0 bits (759), Expect = 5.700e-77 Identity = 144/239 (60.25%), Postives = 181/239 (75.73%), Query Frame = 0 Query: 3 FRPCIDLHAGKVKQIVGSSLTG---NDAALVTNFEAKMSAEDFAKMYQSDDLKGGHVIMLGDGCEEAALAALRAYPGGLQIGGGVTPESAQRYVDAGASHVIVTSYLFSGKELDFEKLKKMEGVVGKEKLVVDLSCRRKAEDGPEGPYYVVKDKWQTYTDFQINRENLAKLSKHCDEFLVHGVDVEGLKVGILEDLVVLLGDISPLPVTYAGGARSIEDLQRVTELGRGKVRTCTSSSV 239 FRPCIDLH GKVKQIVGS+L+ + L TN+E S+ DFAKMY+ D L+GGHVIMLG GCEEAALAA++A+PGGL +GGGV P +A +Y+DAGASHVIVTSY+F E+D+E+L+++ VGK++LV+DLSCRR+ G + VV +KWQ +T F + RENL +L+ +CDEFLVHGVD EG G+LEDLV LLGD SP VTYAGGA S+ DL RV ELGRG+V S++ Sbjct: 25 FRPCIDLHEGKVKQIVGSTLSATGERTSTLETNYETTKSSADFAKMYERDGLRGGHVIMLGGGCEEAALAAIKAFPGGLHVGGGVNPSNAMKYLDAGASHVIVTSYVFKDGEIDWERLEELRTAVGKDRLVLDLSCRRRPGGLERGDFLVVTNKWQKFTRFAVTRENLERLAGYCDEFLVHGVDAEGKMCGVLEDLVSLLGDFSPRLVTYAGGASSLTDLDRVRELGRGRVDLTIGSAL 263
BLAST of NO16G02590 vs. NCBI_GenBank
Match: EJK44748.1 (hypothetical protein THAOC_36689 [Thalassiosira oceanica]) HSP 1 Score: 287.3 bits (734), Expect = 4.500e-74 Identity = 143/247 (57.89%), Postives = 179/247 (72.47%), Query Frame = 0 Query: 1 MVFRPCIDLHAGKVKQIVGSSLT---------GNDAALVTNFEAKMSAEDFAKMYQSDDLKGGHVIMLGDGCEEAALAALRAYPGGLQIGGGVTPESAQRYVDAGASHVIVTSYLFSGKELDFEKLKKMEGVVGKEKLVVDLSCRRKAEDGPEGPYYVVKDKWQTYTDFQINRENLAKLSKHCDEFLVHGVDVEGLKVGILEDLVVLLGDISPLPVTYAGGARSIEDLQRVTELGRGKVRTCTSSSV 239 M FRPCIDLHAGKVKQIVGS+LT + TNF+ A D+A MY D L GGHVIMLG G +AA +AL AYP GLQ+GGG+T ++AQ ++ GASHVIVTS++F +D+++L K+ G++GK++LV+DLSCRRKA D +GPYYVV D+WQTYT+ ++N+ L KLS +CDEFLVHGV+ EG K GILEDLV LLG SPLP TYAGG + +EDL RV ELG GKV S++ Sbjct: 1 MKFRPCIDLHAGKVKQIVGSTLTDDKKNALASASSEVSCTNFQTDKPASDYASMYARDKLTGGHVIMLGSGNVDAAKSALEAYPNGLQVGGGITCDNAQEWLGYGASHVIVTSHVFRSGTIDWDRLTKLVGLIGKDRLVLDLSCRRKASDA-DGPYYVVTDRWQTYTEVEVNQATLEKLSGYCDEFLVHGVENEGKKCGILEDLVELLGKYSPLPCTYAGGVKGLEDLDRVKELGNGKVDLTIGSAL 246
BLAST of NO16G02590 vs. NCBI_GenBank
Match: SHE15026.1 (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m ethylideneamino] imidazole-4-carboxamide isomerase [Chlamydia abortus]) HSP 1 Score: 278.1 bits (710), Expect = 2.700e-71 Identity = 136/239 (56.90%), Postives = 180/239 (75.31%), Query Frame = 0 Query: 1 MVFRPCIDLHAGKVKQIVGSSLTGNDA-ALVTNFEAKMSAEDFAKMYQSDDLKGGHVIMLGDGCEEAALAALRAYPGGLQIGGGVTPESAQRYVDAGASHVIVTSYLFSGKELDFEKLKKMEGVVGKEKLVVDLSCRRKAEDGPEGPYYVVKDKWQTYTDFQINRENLAKLSKHCDEFLVHGVDVEGLKVGILEDLVVLLGDISPLPVTYAGGARSIEDLQRVTELGRGKVRTCTSSSV 239 M FRPCIDLH GKVKQIVGSSL + + +LVTNFEA+MSA D+A++Y D L GGHVIMLG G EEAAL+AL+AYPGGLQ+GGG+ ++A++Y++AGASHVIVTSY+F ++DFE+L + ++GKE+LV+DLSCR++ + YYVV D+WQ +T ++I + NL +LS +CDEFL+H VDVEGL GI +LV LG+ +P TYAGGA DL V ELG+GK+ S++ Sbjct: 1 MKFRPCIDLHDGKVKQIVGSSLNDDSSDSLVTNFEAEMSAADYARLYAKDGLTGGHVIMLGPGNEEAALSALQAYPGGLQLGGGINADNAKKYIEAGASHVIVTSYVFQNGQIDFERLSGLVKLIGKERLVLDLSCRKRGD-----TYYVVTDRWQKFTSYEITKHNLDELSAYCDEFLIHAVDVEGLCRGIETELVEKLGEWVTIPTTYAGGASQYSDLNLVKELGQGKIDLTIGSAL 234
BLAST of NO16G02590 vs. NCBI_GenBank
Match: GAX25811.1 (phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Fistulifera solaris]) HSP 1 Score: 275.8 bits (704), Expect = 1.400e-70 Identity = 134/236 (56.78%), Postives = 172/236 (72.88%), Query Frame = 0 Query: 3 FRPCIDLHAGKVKQIVGSSLTGNDAALVTNFEAKMSAEDFAKMYQSDDLKGGHVIMLGDGCEEAALAALRAYPGGLQIGGGVTPESAQRYVDAGASHVIVTSYLFSGKELDFEKLKKMEGVVGKEKLVVDLSCRRKAEDGPEGPYYVVKDKWQTYTDFQINRENLAKLSKHCDEFLVHGVDVEGLKVGILEDLVVLLGDISPLPVTYAGGARSIEDLQRVTELGRGKVRTCTSSSV 239 FRPCIDLH G+VKQIVGS+LT L TNF A D+A +Y D L GGHVIMLG G EAA +AL+AYP LQ+GGG+ + Q ++D GASHVI+TS +F ++ +EKLK++ ++GKE+LV+DLSCR+K +G YYVV DKWQ +TD+ + +NL L+++CDEFLVHGVDVEG + GILEDLV LLG+ SP+PVTYAGG RS+EDL V LG+GKV S++ Sbjct: 4 FRPCIDLHQGQVKQIVGSTLTTESTDLATNFSTNKPASDYAALYAKDQLTGGHVIMLGPGNTEAAQSALKAYPNHLQVGGGIDETNCQEWIDFGASHVIITSAVFKDGKVYWEKLKRIVDLIGKERLVLDLSCRKK-----DGDYYVVTDKWQKFTDYPVTPDNLKDLAQYCDEFLVHGVDVEGKQCGILEDLVELLGEHSPVPVTYAGGVRSVEDLDLVERLGQGKVDITVGSAL 234
BLAST of NO16G02590 vs. NCBI_GenBank
Match: XP_002294329.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED88163.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 274.2 bits (700), Expect = 3.900e-70 Identity = 140/247 (56.68%), Postives = 176/247 (71.26%), Query Frame = 0 Query: 1 MVFRPCIDLHAGKVKQIVGSSLTGNDAALVT---------NFEAKMSAEDFAKMYQSDDLKGGHVIMLGDGCEEAALAALRAYPGGLQIGGGVTPESAQRYVDAGASHVIVTSYLFSGKELDFEKLKKMEGVVGKEKLVVDLSCRRKAEDGPEGPYYVVKDKWQTYTDFQINRENLAKLSKHCDEFLVHGVDVEGLKVGILEDLVVLLGDISPLPVTYAGGARSIEDLQRVTELGRGKVRTCTSSSV 239 M FRPCIDLH+G VKQIVGS+L+ + +T NF A +FA+MY+ D L GGHVIMLG G EEAA +AL AYP GLQIGGG+T ++A +++ GASHVIVTS++F ++DF++L K+ ++GK+KLV+DLSCRRK D G YYVV D+WQTYTD +N L L K+C EFLVHGV+ EG + GILEDLVVLLG SPLPVTYAGG + ++DL RV ELG GKV S++ Sbjct: 1 MKFRPCIDLHSGIVKQIVGSTLSDDKQNALTSKSTTDPAENFSTDRPASEFAEMYKRDGLVGGHVIMLGSGNEEAAKSALAAYPQGLQIGGGITSQNASQWLSYGASHVIVTSHVFHNGQIDFQRLNKLVELIGKDKLVLDLSCRRKMGD-ETGDYYVVTDRWQTYTDVAVNETTLENLGKYCSEFLVHGVENEGKRCGILEDLVVLLGKHSPLPVTYAGGVQGMDDLDRVKELGGGKVDLTIGSAL 246
BLAST of NO16G02590 vs. NCBI_GenBank
Match: OIO93012.1 (phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Armatimonadetes bacterium CG2_30_66_41] >PIY51123.1 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Armatimonadetes bacterium CG_4_10_14_3_um_filter_66_18] >PIZ44607.1 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Armatimonadetes bacterium CG_4_10_14_0_8_um_filter_66_14]) HSP 1 Score: 273.9 bits (699), Expect = 5.100e-70 Identity = 135/239 (56.49%), Postives = 173/239 (72.38%), Query Frame = 0 Query: 1 MVFRPCIDLHAGKVKQIVGSSLTGND-AALVTNFEAKMSAEDFAKMYQSDDLKGGHVIMLGDGCEEAALAALRAYPGGLQIGGGVTPESAQRYVDAGASHVIVTSYLFSGKELDFEKLKKMEGVVGKEKLVVDLSCRRKAEDGPEGPYYVVKDKWQTYTDFQINRENLAKLSKHCDEFLVHGVDVEGLKVGILEDLVVLLGDISPLPVTYAGGARSIEDLQRVTELGRGKVRTCTSSSV 239 M FRPCIDLH GKVKQ+VG SL D A+ NF A A DFA++Y+ D L GGHVI+LG G E+ AL+ALRAYPGGLQ+GGG+ P++AQR++DAGASHVIVTSY+F +D + L++M V KE+LV+DLSCRR+ + Y VV D+WQ +T+ ++NR NL L++HC EFLVH DVEG + GI EDLV LG+ SP+P TYAGGA S+ DL RV ELG G++ S++ Sbjct: 1 MRFRPCIDLHEGKVKQLVGGSLREEDPKAVQENFVADRPAADFARLYREDGLPGGHVILLGPGNEDEALSALRAYPGGLQVGGGLNPDNAQRFLDAGASHVIVTSYVFRAGRIDSDNLRRMVEAVSKERLVLDLSCRRRGD-----RYLVVTDRWQRFTEVEVNRANLEALARHCSEFLVHAADVEGKREGIQEDLVASLGEWSPVPTTYAGGATSLADLDRVNELGDGRIDLTIGSAL 234
BLAST of NO16G02590 vs. NCBI_GenBank
Match: XP_005836356.1 (hypothetical protein GUITHDRAFT_85755 [Guillardia theta CCMP2712] >EKX49376.1 hypothetical protein GUITHDRAFT_85755 [Guillardia theta CCMP2712]) HSP 1 Score: 272.7 bits (696), Expect = 1.100e-69 Identity = 135/238 (56.72%), Postives = 177/238 (74.37%), Query Frame = 0 Query: 1 MVFRPCIDLHAGKVKQIVGSSLTGNDAALVTNFEAKMSAEDFAKMYQSDDLKGGHVIMLGDGCEEAALAALRAYPGGLQIGGGVTPESAQRYVDAGASHVIVTSYLFSGKELDFEKLKKMEGVVGKEKLVVDLSCRRKAEDGPEGPYYVVKDKWQTYTDFQINRENLAKLSKHCDEFLVHGVDVEGLKVGILEDLVVLLGDISPLPVTYAGGARSIEDLQRVTELGRGKVRTCTSSSV 239 M FRPCIDLH VKQIVG +L TNF + +SA+++A+ Y+ D+L GGHVIMLG G +EAAL+AL+AYPGGLQIGGG+ P +A++++DAGASHVIVTSY+F L EKLK++ V GK+KLV+DLSCRRK +G YYVV D+WQT+T+ ++N+E + LS++C EFLVHGVDVEG ++GI E+LV LLG+ +P TYAGGA + DL RV +G+GKV SS+ Sbjct: 4 MRFRPCIDLHNSIVKQIVGGTLADGKEP-TTNFTSSLSAKEYAEKYKKDNLPGGHVIMLGPGNDEAALSALQAYPGGLQIGGGINPSNAKQWLDAGASHVIVTSYIFENGSLSMEKLKELFAVTGKDKLVLDLSCRRK----EDGKYYVVTDRWQTFTNLEVNKETIDMLSEYCAEFLVHGVDVEGKRMGIEEELVRLLGEHCSIPCTYAGGADLLSDLDRVKAMGKGKVDLTIGSSL 236
BLAST of NO16G02590 vs. NCBI_GenBank
Match: WP_014958199.1 (MULTISPECIES: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Desulfobacula] >CCK80988.1 HisA: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [Desulfobacula toluolica Tol2] >SDT84965.1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [Desulfobacula phenolica]) HSP 1 Score: 271.9 bits (694), Expect = 2.000e-69 Identity = 134/239 (56.07%), Postives = 174/239 (72.80%), Query Frame = 0 Query: 1 MVFRPCIDLHAGKVKQIVGSSLTGND-AALVTNFEAKMSAEDFAKMYQSDDLKGGHVIMLGDGCEEAALAALRAYPGGLQIGGGVTPESAQRYVDAGASHVIVTSYLFSGKELDFEKLKKMEGVVGKEKLVVDLSCRRKAEDGPEGPYYVVKDKWQTYTDFQINRENLAKLSKHCDEFLVHGVDVEGLKVGILEDLVVLLGDISPLPVTYAGGARSIEDLQRVTELGRGKVRTCTSSSV 239 M FRPCIDL GKV QIVG +L ++ + VTNF+ ++ +FA+MY+ D+LKGGHVI LG G +AAL+AL+AYPGGLQIGGG+TP +A+RY+DAGASHVIVTSY+FS ++D KL+ + VGKE LV+D+SCR+K G +++V D+WQ YTD +N E + L+ +CDEFLVHGVDVEG+ GI DLV LLG SP+PVTYAGGA DL +V LGR +V S++ Sbjct: 1 MKFRPCIDLREGKVVQIVGGTLKESEKVSPVTNFQTGRASSEFAQMYRKDNLKGGHVISLGPGNTDAALSALKAYPGGLQIGGGITPSNAERYLDAGASHVIVTSYVFSNGKIDLAKLQTLVDCVGKENLVLDMSCRKK-----NGEFWIVTDRWQKYTDVVVNPETIIHLASYCDEFLVHGVDVEGMMQGIQTDLVELLGTCSPIPVTYAGGANRFSDLDKVKHLGRNRVDLTIGSAL 234
BLAST of NO16G02590 vs. NCBI_GenBank
Match: GAX93887.1 (phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, variant [Pythium insidiosum]) HSP 1 Score: 271.9 bits (694), Expect = 2.000e-69 Identity = 140/240 (58.33%), Postives = 175/240 (72.92%), Query Frame = 0 Query: 1 MVFRPCIDLHAGKVKQIVGSSLTGNDAALVTNFEAKMSAEDFAKMYQSDDLKGGHVIMLGDGCEE--AALAALRAYPGGLQIGGGVTPESAQRYVDAGASHVIVTSYLFSGKELDFEKLKKMEGVVGKEKLVVDLSCRRKAEDGPEGPYYVVKDKWQTYTDFQINRENLAKLSKHCDEFLVHGVDVEGLKVGILEDLVVLLGDISPLPVTYAGGARSIEDLQRVTELGRGKVRTCTSSSV 239 M FRPCID+HAG+VKQIVGS+LT A VTNF A MSA FA+MY+ D + GGHVIMLG E AAL ALR YP GLQIGGG+ E+ Q YV GASHVIVTSY+F ++DFE+L+K++ ++GK+ LV+DLSCR+KAED G +YV+ D+WQ +T I+ A LS++CDEFLVH VDVEG + GI ++LV LL SPLPVTYAGGA S+EDL+ V +G GKV S++ Sbjct: 1 MRFRPCIDIHAGEVKQIVGSTLTDGQEAPVTNFVASMSAGAFARMYKEDGIAGGHVIMLGASEENKAAALEALREYPXGLQIGGGINDENCQFYVQNGASHVIVTSYVFRDGKIDFERLQKLKDLIGKKHLVLDLSCRKKAED---GKFYVMTDRWQKFTTTSIDEALFATLSEYCDEFLVHAVDVEGKRCGIQQELVELLAKWSPLPVTYAGGAHSLEDLEFVERIGNGKVDLSIGSAL 237 The following BLAST results are available for this feature:
BLAST of NO16G02590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G02590 ID=NO16G02590|Name=NO16G02590|organism=Nannochloropsis oceanica|type=gene|length=2783bpback to top protein sequence of NO16G02590.2 >NO16G02590.2-protein ID=NO16G02590.2-protein|Name=NO16G02590.2|organism=Nannochloropsis oceanica|type=polypeptide|length=254bpback to top protein sequence of NO16G02590.1 >NO16G02590.1-protein ID=NO16G02590.1-protein|Name=NO16G02590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=261bpback to top Synonyms
Publications
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