NO16G02530, NO16G02530 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G02530 vs. NCBI_GenBank
Match: EWM23874.1 (Adaptin ear-binding coat-associated protein 1 NECAP-1 [Nannochloropsis gaditana]) HSP 1 Score: 242.7 bits (618), Expect = 2.100e-60 Identity = 121/168 (72.02%), Postives = 138/168 (82.14%), Query Frame = 0 Query: 82 EDTVERTLCQIRTVHVFKIPPRLSAGGYRASDWKEEVWQGALKVVQKGLDAAILLIDPKNGSLFAMCPIKEGSVERCVDSSRYFVLKIQNASGRHAFVGVAFNEREEAFDFNVAMQEYEKDKARTERLRTRGKESEEEDGREGGGPKVDLSLKEGEKLTIRLPTREGG 250 ED VERTLCQIR+VHVFKIPPR SAGGYRASDWK+EVWQGA+K+VQKGLDAAI+L DPK GSLFAM PIKEGSVERCVDSSRYFVLK+QNA+G+HAF+GVAF+ERE+AFDFNVA+QEY + D G PK DLSLKEGEK++I+LPTR+GG Sbjct: 45 EDAVERTLCQIRSVHVFKIPPRTSAGGYRASDWKDEVWQGAVKIVQKGLDAAIVLTDPKTGSLFAMSPIKEGSVERCVDSSRYFVLKVQNAAGKHAFIGVAFDEREQAFDFNVAIQEY-XXXXXXXXXXXXXXXAGGVDSMGAGIPKRDLSLKEGEKISIKLPTRQGG 211
BLAST of NO16G02530 vs. NCBI_GenBank
Match: XP_005853878.1 (hypothetical protein NGA_0437400 [Nannochloropsis gaditana CCMP526] >EKU22485.1 hypothetical protein NGA_0437400 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 197.6 bits (501), Expect = 7.700e-47 Identity = 90/105 (85.71%), Postives = 100/105 (95.24%), Query Frame = 0 Query: 82 EDTVERTLCQIRTVHVFKIPPRLSAGGYRASDWKEEVWQGALKVVQKGLDAAILLIDPKNGSLFAMCPIKEGSVERCVDSSRYFVLKIQNASGRHAFVGVAFNER 187 ED VERTLCQIR+VHVFKIPPR SAGGYRASDWK+EVWQGA+K+VQKGLDAAI+L DPK GSLFAM PIKEGSVERCVDSSRYFVLK+QNA+G+HAF+GVAF+ER Sbjct: 7 EDAVERTLCQIRSVHVFKIPPRTSAGGYRASDWKDEVWQGAVKIVQKGLDAAIVLTDPKTGSLFAMSPIKEGSVERCVDSSRYFVLKVQNAAGKHAFIGVAFDER 111
BLAST of NO16G02530 vs. NCBI_GenBank
Match: XP_002177852.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC50666.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 176.0 bits (445), Expect = 2.400e-40 Identity = 81/159 (50.94%), Postives = 115/159 (72.33%), Query Frame = 0 Query: 83 DTVERTLCQIRTVHVFKIPPRLSAGGYRASDWKEEVWQGALKVVQKGLDAAILLIDPKNGSLFAMCPIKEGSVERCVDSSRYFVLKIQNASGRHAFVGVAFNEREEAFDFNVAMQEYEKDKARTERLRTRGKESEEEDGREGGGPKVDLSLKEGEKLTI 242 + +ER C I HVFK+PPR +AGG+R +DW +EVWQG LKVV++G ILL D ++FA+CP+KEG+V+RCVDSSRYFVL+++NA+GRH F+G+AFNER +AFDFN ++++ ++K E+ E+G + G PK D S+K+GEK+ I Sbjct: 4 EVIERVRCVIPDAHVFKLPPRQTAGGWRGADWDQEVWQGTLKVVERGALTVILLTDKTTHAIFAVCPVKEGAVDRCVDSSRYFVLRVENAAGRHMFIGLAFNERNDAFDFNTSLEDSRREKE---------AEANPEEGTDSGPPK-DYSMKDGEKIHI 152
BLAST of NO16G02530 vs. NCBI_GenBank
Match: GAX15551.1 (hypothetical protein FisN_6Hh151 [Fistulifera solaris]) HSP 1 Score: 175.3 bits (443), Expect = 4.100e-40 Identity = 84/159 (52.83%), Postives = 113/159 (71.07%), Query Frame = 0 Query: 83 DTVERTLCQIRTVHVFKIPPRLSAGGYRASDWKEEVWQGALKVVQKGLDAAILLIDPKNGSLFAMCPIKEGSVERCVDSSRYFVLKIQNASGRHAFVGVAFNEREEAFDFNVAMQEYEKDKARTERLRTRGKESEEEDGREGGGPKVDLSLKEGEKLTI 242 + +ER C I H+FK+PPR +AGG+R +DW +EVWQG LKVV++G ILL+DPK S+FA+CP+ +G+V+RCVDSSRYFVLK++NA G+H FVG+AFNER +AFDFN A+++ AR E KE E+ + G D S+KEGEK+ I Sbjct: 25 EVIERVRCTIPDAHIFKLPPRPTAGGWRGADWDKEVWQGTLKVVERGDLTVILLVDPKKNSIFAVCPVSDGAVDRCVDSSRYFVLKVENADGKHLFVGMAFNERNDAFDFNTALED-----ARRE------KEVEQNMAKLDIGEPKDYSIKEGEKIHI 172
BLAST of NO16G02530 vs. NCBI_GenBank
Match: CBN74630.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 172.9 bits (437), Expect = 2.000e-39 Identity = 85/174 (48.85%), Postives = 124/174 (71.26%), Query Frame = 0 Query: 82 EDTVERTLCQIRTVHVFKIPPRLSAGGYRASDWKEEVWQGALKVVQKGLDAAILLIDPKNGSLFAMCPIKEGSVERCVDSSRYFVLKIQNASGRHAFVGVAFNEREEAFDFNVAMQEYEKDKARTERLRTRGK----ESEEEDGREGGGPKVDLSLKEGEKLTIRLPTREGGVG 252 ++ VE TL QI+ ++F++PPR+ A G+ A+D +++W G ++VVQ+G +AAI+L+D ++G LFAMC + +G+VER DSSRYFV+KIQNA GRHAFVG+AF++R +AFDFNVA+QE++KD R+ +L+ G+ PKVDLSLK+GEK+ I + VG Sbjct: 7 DEIVEHTLTQIQECYLFELPPRVRAQGWLAADMTKQMWTGRMRVVQRGQEAAIMLVDRRDGKLFAMCKVADGAVERVPDSSRYFVIKIQNAQGRHAFVGLAFDDRNQAFDFNVALQEFKKDIERSTKLKEDGQGXXXXXXXXXXXXAATPKVDLSLKQGEKIKISIGGGSSKVG 180
BLAST of NO16G02530 vs. NCBI_GenBank
Match: OEU12387.1 (DUF1681-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 172.6 bits (436), Expect = 2.600e-39 Identity = 78/171 (45.61%), Postives = 120/171 (70.18%), Query Frame = 0 Query: 81 SEDTVERTLCQIRTVHVFKIPPRLSAGGYRASDWKEEVWQGALKVVQKGLDAAILLIDPKNGSLFAMCPIKEGSVERCVDSSRYFVLKIQNASGRHAFVGVAFNEREEAFDFNVAMQEYEKDKARTERLRTRGKESEEEDGREGGGPKVDLSLKEGEKLTIRLPTREGGVG 252 ++D +ER C I+ HVFK+PPR ++GG+R +DW++EVWQG +KVV++ +LL+D +G +FA+CPIK+G+V+RCVDSSRYFVLKI+N +GRH FVGVAFNER ++FDFN ++++ ++++A + + P+ D S+KEGEK+ +++ G G Sbjct: 47 NKDVIERVRCVIKDAHVFKLPPRPTSGGWRGADWRDEVWQGTVKVVERDEMTLVLLVDKVSGDVFAVCPIKDGAVDRCVDSSRYFVLKIENDNGRHMFVGVAFNERNDSFDFNTSLEDAKRERAAAK---------APIQNKIPNLPEKDYSIKEGEKIHVKIKNISGRYG 208
BLAST of NO16G02530 vs. NCBI_GenBank
Match: GAX09470.1 (hypothetical protein FisN_6Lh151 [Fistulifera solaris]) HSP 1 Score: 172.2 bits (435), Expect = 3.500e-39 Identity = 83/159 (52.20%), Postives = 113/159 (71.07%), Query Frame = 0 Query: 83 DTVERTLCQIRTVHVFKIPPRLSAGGYRASDWKEEVWQGALKVVQKGLDAAILLIDPKNGSLFAMCPIKEGSVERCVDSSRYFVLKIQNASGRHAFVGVAFNEREEAFDFNVAMQEYEKDKARTERLRTRGKESEEEDGREGGGPKVDLSLKEGEKLTI 242 + +ER C I H+FK+PPR +AGG+R +DW +EVWQG LKVV++G ILL+D KN S+FA+CP+ +G+V+RCVDSSRYFVLK+++A G+H FVG+AFNER +AFDFN A+++ AR E KE E+ + G D S+KEGEK+ I Sbjct: 25 EVIERVRCTIPDAHIFKLPPRPTAGGWRGADWDKEVWQGTLKVVERGDLTVILLLDSKNNSIFAVCPVSDGAVDRCVDSSRYFVLKVESADGKHLFVGMAFNERNDAFDFNTALED-----ARRE------KEVEQNMAKLDIGEPKDYSIKEGEKIHI 172
BLAST of NO16G02530 vs. NCBI_GenBank
Match: EJK61898.1 (hypothetical protein THAOC_17524 [Thalassiosira oceanica]) HSP 1 Score: 157.5 bits (397), Expect = 8.800e-35 Identity = 88/212 (41.51%), Postives = 130/212 (61.32%), Query Frame = 0 Query: 56 LRLAITHVPSPPLCLRLSVPPTPQLSEDT-----VERTLCQIRTVHVFKIPPRLSAGGYRASDWKEEVWQGALKVVQKGLDAAILLIDPKN-GSLFAMCPIKE----------GSVERCVDSSRYFVLKIQNASGRHAFVGVAFNEREEAFDFNVAMQEYEKDKARTERLRTRGKESEEEDGREGGGPKVDLSLKEGEKLTIRLPTREGGVG 252 L+ +VP+ P L PQ S T VER +IR HVFK+PP+ +GG+R +DW+++VWQG LKVV++G + A+LL+DP N ++FA+CPI+ V+RC+DSSRYFVLKIQN GR F+G+AFNER +AFDFN A+++ ++K ER ++G + ++G V+ +KEGEK+ + +P+ G Sbjct: 228 LKRTSANVPASP-ALHADHTTFPQCSPQTDDVMLVERVRLKIRNCHVFKLPPKPDSGGWRGADWRDKVWQGNLKVVERGDETAVLLVDPTNEKNIFAVCPIRHNDNFDGTNSGNGVDRCIDSSRYFVLKIQNGQGRTLFIGLAFNERADAFDFNTALEDSRREKL-AERKASQGISHLVQ--KQG----VNYKMKEGEKIKVAIPSTNSSAG 431
BLAST of NO16G02530 vs. NCBI_GenBank
Match: XP_002294251.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED88606.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 151.0 bits (380), Expect = 8.200e-33 Identity = 74/178 (41.57%), Postives = 111/178 (62.36%), Query Frame = 0 Query: 83 DTVERTLCQIRTVHVFKIPPRLSAGGYRASDWKEEVWQGALKVVQKGLDAAILLID-PKNGSLFAMCPIKEG---------------SVERCVDSSRYFVLKIQNASGRHAFVGVAFNEREEAFDFNVAMQEYEKDKARTERLRTRGKESEEEDGREGGGPKVDLSLKEGEKLTIRLP 245 + +ER +I HVFK+PP+ S+GG+R +DW+++VWQG LKVV++G + A+LL+D + ++FA+CPI ++RC+DSSRYFVL+IQNA GRH F+G+AFNER +AFDFN A+++ ++K E + G VD +KEGEK+ + +P Sbjct: 46 ELIERVRLKIPNAHVFKLPPKPSSGGWRGADWRDKVWQGVLKVVERGEETAVLLVDSSEERNIFAVCPIVHNLTGGSXXXXXXXXXXGIDRCIDSSRYFVLRIQNAHGRHMFIGLAFNERNDAFDFNTALEDSRREKE---------AEQKAAMGLSNNVKGVDYRMKEGEKIKVSIP 214
BLAST of NO16G02530 vs. NCBI_GenBank
Match: GAQ89534.1 (hypothetical protein KFL_005330090 [Klebsormidium nitens]) HSP 1 Score: 148.3 bits (373), Expect = 5.300e-32 Identity = 77/173 (44.51%), Postives = 108/173 (62.43%), Query Frame = 0 Query: 82 EDTVERTLCQIRTVHVFKIPPRLSAGGYRASDW--KEEVWQGALKVVQKGLDAAILLIDPKNGSLFAMCPI----KEGSVERCVDSSRYFVLKIQNASGRHAFVGVAFNEREEAFDFNVAMQEYEKDKAR-TERLRTRGKESEEEDGREGGGPKVDLSLKEGEKLTIRLPTRE 248 E+++E+TL +R VHV+KIPPR +GGY+ ++W + +W G ++V+ G I L D G LFA CP+ +E SVE DSSRYFVL+I + +G+HAF+GV FNER EAFDFNVA+ + EK R TER ++E + P +L LKEGE + I + T + Sbjct: 7 EESLEQTLLVVREVHVYKIPPRQGSGGYKCAEWLVSDRIWSGRMRVISHGHKCEIRLEDNNTGELFAACPVQAGKREASVESVTDSSRYFVLRISDGAGKHAFIGVGFNERNEAFDFNVALSDQEKWTLRETER-------ADEPEEAPAASPAANLKLKEGETIRISVKTNK 172 The following BLAST results are available for this feature:
BLAST of NO16G02530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G02530 ID=NO16G02530|Name=NO16G02530|organism=Nannochloropsis oceanica|type=gene|length=5488bpback to top protein sequence of NO16G02530.2 >NO16G02530.2-protein ID=NO16G02530.2-protein|Name=NO16G02530.2|organism=Nannochloropsis oceanica|type=polypeptide|length=416bpback to top protein sequence of NO16G02530.1 >NO16G02530.1-protein ID=NO16G02530.1-protein|Name=NO16G02530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=341bpback to top Synonyms
Publications
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