NO16G02530.1, NO16G02530.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO16G02530.1
Unique NameNO16G02530.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4939
Alignment locationchr16:727374..732861 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:727374..732861 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO16G02530.1 vs.
Match: EWM23874.1 (Adaptin ear-binding coat-associated protein 1 NECAP-1 [Nannochloropsis gaditana])

HSP 1 Score: 307.0 bits (785), Expect = 7.400e-80
Identity = 190/314 (60.51%), Postives = 219/314 (69.75%), Query Frame = 0
Query:    1 MASYADEDTVERTLCQIRTVHVFKIPPRLSAGGYRASDWKEEVWQGALKVVQKGLDAAILLIDPKNGSLFAMCPIKEGSVERCVDSSRYFVLKIQNASGRHAFVGVAFNEREEAFDFNVAMQEYEKDKARTERLRTRGKESEEEDGREGGGPKVDLSLKEGEKLTIRLPTREGGVGATTGGERKKRVTGGGGGITSGGGLLPPPPGS--SWGGLLAPPASVSSAPAVRRAQTGAAAHDDFLAGSGTRVTATTGWKDGDAVASPPLLPPLAPRLLPPPLPPP-RRQARTTLAASWPLSSPPSPSPPHF-LLFPAP 311
            MAS+A+ED VERTLCQIR+VHVFKIPPR SAGGYRASDWK+EVWQGA+K+VQKGLDAAI+L DPK GSLFAM PIKEGSVERCVDSSRYFVLK+QNA+G+HAF+GVAF+ERE+AFDFNVA+QEYEKDK R ERLRT G  +   D    G PK DLSLKEGEK++I+LPTR+GG       ER+ R   G G  +SG G+LPPPPGS    GGLLAPP S  S     +   GAAAHDDF  G+G+        K+    +S PL    A R    P P          +A S P SS PSP+   F   FP P
Sbjct:   39 MASHAEEDAVERTLCQIRSVHVFKIPPRTSAGGYRASDWKDEVWQGAVKIVQKGLDAAIVLTDPKTGSLFAMSPIKEGSVERCVDSSRYFVLKVQNAAGKHAFIGVAFDEREQAFDFNVAIQEYEKDKEREERLRT-GVGAGGVDSMGAGIPKRDLSLKEGEKISIKLPTRQGG-------ERRPR---GIGKESSGNGVLPPPPGSCRGGGGLLAPPPSTGSGGG--KVYGGAAAHDDFFRGTGSLAAGPPPRKEDGTESSGPLPSVSAHRSPATPAPSGFPDDFGGFVAPSNPPSSSPSPAATRFPTAFPIP 339          
The following BLAST results are available for this feature:
BLAST of NO16G02530.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM23874.17.400e-8060.51Adaptin ear-binding coat-associated protein 1 NECA... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G02530NO16G02530Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO16G02530.1NO16G02530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO16G02530.1.cds1NO16G02530.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO16G02530.1.cds2NO16G02530.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO16G02530.1.cds3NO16G02530.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO16G02530.1 ID=NO16G02530.1|Name=NO16G02530.1|organism=Nannochloropsis oceanica|type=mRNA|length=4939bp
GGGCTCACGATCTCGATGGGACCAGAGGCTTGAGACACAATCATGGAAAG
CATGAGCGCCATGATTCAACAAGGTGCACTTCTCATACCTTGTAATGTTT
TGAAGAATGCGGTGAACGACAAACAATTAACACACATGAAGGAGGGAAAG
GCATAGGACTTAGCACATACATCTACGTACCCGGGTTGGCTGGAAAATGG
TGCCATAGTTCCTGCCTGCAAAGGTGCTGCCATCGAGGGCTGCTTGGACG
CAGCAGAAAGTGTGTGTATGCACATTCTTTGACTGCGGGCGGCGGAGGTG
GTGTCCATGTTGGTGGTGCTATTGCTGCTGCTGCGAGTCATGACCGCCAC
AGTGGCAGCAGTGGGGTGCGAAGCCCCCGAGCTGGAGATAGACAGGCTGC
CTGTGTTGCTGGTCCGCCGCCGCACCATCCTGGCGCCCGTTGACGTTGCC
AATGCGGTCAGTTGCTTGGTGGGGCGCAAAATGCATGTCTGCATGGCTGC
GCTGGCCTGGACTGCCTGTCGCGTAATGATGGTGATGGTGAGGTGGATGA
TCTTTTTTGAGTGGCGTGGGAGTGGACGTGCAAAGGCAAGGACTACGACG
ACAAGCAGAGCTGGGTGGGCTTCTAAAAATGCATGCCAATACAGCTGTGT
GCGTAGAGTTGATTCTTGCCATGTTGATGAAATGCGGGCATATGCATTTG
GGAACAGGCGCACGCAAGTTGCTGCGAGGCTCGCTGCCTGCCGAGTCCTT
CGTGAGACTCGCCACCTGAGCTTCATGTCTACTTTGTTTACATGTGCGTT
GATGTATACATACAGTACCACCGCCTCCAGAGCCTCCTTCTCCACATTTT
TTTCGTCCTGATGACGGCGGCGGTCACGACTGCGTGTGTCCAGTCTTTAC
TATTTTCCCACCCTTCGCTCGATCCTAGGCAATTCCATAGGCTGGCCCCG
TCGAGGAATGCATAAATATTCATTGACAACGTCCCTCTCTTCCAAAATCA
TCTTTTCCTCACATGACCATAGCCAACACATCTGCACAGAATAAGTAGGC
CTCGATTGAAAGGCGCGCTTGTGAAAAAGTCGCACAATTTCCGGGAGCCC
AGCAGCCTCAGGCCAGCAACTACGACAGTCCTGCACCTTCAGTCCATCAG
CCCCACCACGCTCCCTATGGCTTCTTACGCAGACGAAGACACGGTCGAAC
GCACTCTTTGCCAAATTCGGACCGTGCACGTCTTCAAGATCCCTCCCCGT
CTTAGTGCTGGGGGCTACCGAGCCTCCGACTGGAAGGAGGAAGTGTGGCA
AGGCGCCTTAAAGGTTGTGCAAAAGGGGTTGGACGCCGCCATCTTGCTGA
TTGACCCCAAAAATGGCTCACTCTTCGCCATGTGCCCCATCAAGGAAGGA
TCTGTCGAACGCTGCGTCGACTCCAGCCGGTATTTTGTCTTGAAAATTCA
AAATGCCTCGGGTCGACATGCCTTCGTGGGTGTGGCTTTCAATGAACGCG
AGGAGGCCTTTGACTTCAATGTGGCCATGCAGGAGTACGAGAAAGACAAA
GCGCGGACTGAGAGGTTGAGGACGAGGGGAAAGGAGAGTGAGGAGGAGGA
CGGGAGGGAGGGAGGAGGGCCCAAGGTGGATTTGAGTCTGAAGGAAGGCG
AAAAGCTGACGATCAGGTTGCCCACCCGCGAGGGAGGGGTTGGGGCCACG
ACGGGAGGGGAGAGGAAGAAGAGGGTGACAGGTGGTGGTGGGGGTATAAC
CAGTGGGGGAGGTTTGTTGCCTCCACCGCCGGGGTCGTCGTGGGGAGGCT
TGCTTGCCCCCCCTGCCTCCGTCTCGTCAGCACCAGCGGTGAGGAGGGCA
CAAACGGGCGCGGCAGCTCATGATGACTTTCTGGCTGGGTCTGGCACTAG
AGTGACCGCAACGACGGGATGGAAAGATGGTGATGCTGTTGCTTCCCCCC
CCCTTTTGCCCCCCTTGGCTCCTCGTTTGCTTCCTCCTCCTCTTCCTCCT
CCTCGGCGACAAGCAAGGACGACTTTGGCGGCTTCATGGCCCCTGTCAAG
TCCTCCCTCTCCCTCACCCCCACATTTTCTGCTTTTTCCAGCACCGGCTC
TGACTCCGTGGACGTTGGCGGTGCTGCTCCTTGCTCCAAGAGTGCCACTG
GCCCGGAGTCTGCGAAACCCTCTCCCTTCGATAGCCTGAGTGCCCTCGGT
GCAGGCCTGCCGGGCATGACCAGCGGCAACAGCAACAGCAGCAAGAGCAG
TGATCCTTTCGCGGACTTGCTGCCGTTCAGGTGAGTTGTCGGCGGCAGGA
AAGTGGAGGAAAAGAGGGAGGGATGGAGGGCAGGGAGGGCAGGGAAGGTT
GAAGCGAGGGAGGGGAGGGGAGGTTGTGATGTGTTGATGGTAGAGCGCCG
TTGCATAAATTTGATAGAGGAGATAGAAGGAAGCAAACGGGATAAACATA
GTATATTACTGAGTCCAGACTAGAGACGGCAGCAACAGTAGGACGTAGCA
GAGCAACACGAGACAAAGCACCTTTGATTATCGACAGGAAGAGAATAGAG
AGCACGGACAGACTTGCTTACATACATACAACAAAATTTATGCATCGAAA
ATTATGTTTGCTCATATACAACCAACCAGCCGTCACGGAGGGGTAAGAGA
CGATGGAACGAGGAGGAAGCGGAGGACGGACAGACAGAAGAAAGGTGAAG
AGTGGAAAGGTAGGATGTGTGTGGAGGCACCCTGACTGTACTTTCATGGC
TTATTTACGTGTGAGATGATAGACGTGTTAGATAACAACATGGAATACGA
TATTAAACATTTAGAGAAGAGCAGAGCTTTGCCCCAGAGAAAATCCGTAC
ACAAACGAAATAACAAGAGAACATAACAATAAGAGCATTTTCCCCCCCCT
ATCTTTCCCGATTTTTTTTTGTCTCTTCGCGCGGCACAATTATCTTTATC
TTCTCTCAGCCATTCCTTCCTGCCGTCTAGACTCCTATTCTCTCACTTCC
TTTTCCCTCTCATCTCTCCCTTCTCGCCCCTTTTTTCAATTTGCTTTTTA
CTGGCCACCTAATTTTAAGTATACTTTGTTTAGCTTACCGTTTTTACACA
CTCTTTTTCTCTGTCCAAGAAATATATCTATGGATTTCCGACTTTAGACT
CCAACTGTGTGCTTGATTTTGTAGCCACTCACGGACTCGCTGCCTCCCAG
GGACGGAACACCGTCTTCATCTCTAATGCGCGATTACACACCCACATCAG
CACGTTCGTCATCCCATCAAAGAAGGACTGTCTATATCTTGATTAACCCG
CGCGCAAAGCTTGTCACCGATGGAAACATCGCATTTACCTTCACCGCATC
CGTTACGTACCGCATGTTCCTACACCCAAGCAACACACACGTCACCCCCT
CCCTTGCCAGCAGCCATTCCACGGCGAATTCCTGCAGAGACTTCCCCTCC
GGCAACCTCCCGAAACCCAATTCCCCCTCCACCACCTCCCGCGCATGCGT
TCCACTATGAAAGCTCACAAACCGCTTACACGCGTCCAGGAAGTCTTGAG
CAAGCCTCATCGCCTGGGTGTCAAACGTCCCTTCGGCATTCGCTGTCGCT
TGCAAGCCCCGACGGAGGGCAGGAACAATTGACTGCGACGACAAATTTTC
CCAACTCAAGACGTTGATTTTACCTTCTCCCGCTTGCTTTTGCAGGTAAG
TATCGATTTCTTCGATCTCTGGGCGAAAGATAACGCGAAAGTTATCTGCG
CCCTTGTCCTCGGCGACGGCGTCGAGATAAGCAAGGAGAACATTACGTGC
TTCCTCATAGGCAGGACGGGTATCTTCGTATTCAGCCAGCCGCAAACTCA
TCCGATCATTGAAGGCGTTTAAAGGACGGTTGATCAAGACCATCAGCCCA
TTCTGCGCCGCCCAGTCCGCGGCATGATCCAGCCCCTCTTGTTCCAACAA
ATTTCCCGGCAGTTGAATCGTACTGAAATGATGCTTTGGCGCACGCTCCT
CACCTTCCACCTCTTCCTCTCCTTCAACCTGAGAGGCTACAGCCTTGGCT
GCCCTCTGTGCCATTTCCACCAGGTGGTCGTACTTCAAAAAGTGCGGGTG
TGTTGGAGGCAACGAAAACGAATTGGACGAGATCCCATAGCTCTCAATAC
GACCTTGACCGCTAGCAATCTCTGCTTCCATGGCCTTGAAAGCTTCGAAC
AGACGACGATCCATCTCCGCTCGATGGTCCTCCAGAGCCGCATCGCTGAT
ATCCCGGCGCCCTGCCGGGATGTTGTGCGTGAGATAGTACTCGGGGTTGT
GCAGTAGGAATACGTCCAAGGAGGGCAGGTTGAGGCGATCCAAGGAGCGA
TTAAGTTGATCTTGAAGAAAGGCCGGGTGGATGCAATGTGCGAGATAGGA
AGCAACTTCAACGGTATCGGGGGTCTTGACGGTGCCATCTTGGTATCGTT
CCATGTTTTGTCCTTGAATGTACCCCGCTTTACTCACGATCACCACATCC
TGTCGCTGGATGGCCCCTTCCTCGATGAGCGTTTTCATTACTTCGCCAAC
GACTTCTTCGGCTTCACCGTTACCGTAATTGGCGGAAGTATCAATAAGGT
TAATGCCCTGCAGCAAAGCTTGACGGAGGGACCCGGCTTGCTCCTCGGAA
TTGTGGCCGATTCGATAGGTTCCATAACCAATTCGAGAGATAGGCAGAAT
CATGCCTACATCGGAGCCAGGAATACTGTTGAGAGATGCAGTATCGGTGG
CGGAATTGTCCGTCGTAGTGGTGGTATTGGCAGCGGCAGTGGTGCAGACG
TTGGTGTTGCTGGAGCTGCTTGTGATTCCAGTATTTGGCATGCCGGGGAG
GACAAAGCCTGAGATGGCGACTACGGCAAGCAGGAGCAGCAGTGGCAGCG
TCGGGAAATAAGGTAGGGGCATTCGTTTGTCCTTGTTGT
back to top

protein sequence of NO16G02530.1

>NO16G02530.1-protein ID=NO16G02530.1-protein|Name=NO16G02530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=341bp
MASYADEDTVERTLCQIRTVHVFKIPPRLSAGGYRASDWKEEVWQGALKV
VQKGLDAAILLIDPKNGSLFAMCPIKEGSVERCVDSSRYFVLKIQNASGR
HAFVGVAFNEREEAFDFNVAMQEYEKDKARTERLRTRGKESEEEDGREGG
GPKVDLSLKEGEKLTIRLPTREGGVGATTGGERKKRVTGGGGGITSGGGL
LPPPPGSSWGGLLAPPASVSSAPAVRRAQTGAAAHDDFLAGSGTRVTATT
GWKDGDAVASPPLLPPLAPRLLPPPLPPPRRQARTTLAASWPLSSPPSPS
PPHFLLFPAPALTPWTLAVLLLAPRVPLARSLRNPLPSIA*
back to top

mRNA from alignment at chr16:727374..732861-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO16G02530.1 ID=NO16G02530.1|Name=NO16G02530.1|organism=Nannochloropsis oceanica|type=mRNA|length=5488bp|location=Sequence derived from alignment at chr16:727374..732861- (Nannochloropsis oceanica)
GGGCTCACGATCTCGATGGGACCAGAGGCTTGAGACACAATCATGGAAAG CATGAGCGCCATGATTCAACAAGGTGCACTTCTCATACCTTGTAATGTTT TGAAGAATGCGGTGAACGACAAACAATTAACACACATGAAGGAGGGAAAG GCATAGGACTTAGCACATACATCTACGTACCCGGGTTGGCTGGAAAATGG TGCCATAGTTCCTGCCTGCAAAGGTGCTGCCATCGAGGGCTGCTTGGACG CAGCAGAAAGTGTGTGTATGCACATTCTTTGACTGCGGGCGGCGGAGGTG GTGTCCATGTTGGTGGTGCTATTGCTGCTGCTGCGAGTCATGACCGCCAC AGTGGCAGCAGTGGGGTGCGAAGCCCCCGAGCTGGAGATAGACAGGCTGC CTGTGTTGCTGGTCCGCCGCCGCACCATCCTGGCGCCCGTTGACGTTGCC AATGCGGTCAGTTGCTTGGTGGGGCGCAAAATGCATGTCTGCATGGCTGC GCTGGCCTGGACTGCCTGTCGCGTAATGATGGTGATGGTGAGGTGGATGA TCTTTTTTGAGTGGCGTGGGAGTGGACGTGCAAAGGCAAGGACTACGACG ACAAGCAGAGCTGGGTGGGCTTCTAAAAATGCATGCCAATACAGCTGTGT GCGTAGAGTTGATTCTTGCCATGTTGATGAAATGCGGGCATATGCATTTG GGAACAGGCGCACGCAAGTTGCTGCGAGGCTCGCTGCCTGCCGAGTCCTT CGTGAGACTCGCCACCTGAGCTTCATGTCTACTTTGTTTACATGTGCGTT GATGTATACATACAGTACCACCGCCTCCAGAGCCTCCTTCTCCACATTTT TTTCGTCCTGATGACGGCGGCGGTCACGACTGCGTGTGTCCAGTCTTTAC TATTTTCCCACCCTTCGCTCGATCCTAGGCAATTCCATAGGCTGGCCCCG TCGAGGAATGCATAAATATTCATTGACAACGTCCCTCTCTTCCAAAATCA TCTTTTCCTCACATGACCATAGCCAACACATCTGCACAGAATAAGTAGGC CTCGATTGAAAGGCGCGCTTGTGAAAAAGTCGCACAATTTCCGGGAGCCC AGCAGCCTCAGGCCAGCAACTACGACAGTCCTGCACCTTCAGTCCATCAG CCCCACCACGCTCCCTATGGCTTCTTACGCAGACGGTACGTTCATCCATG CATGGAGGATCTGAACCAGCTGCCCGCGATGCGTGATTGCGGTTTATGCA TGCGTGCCACCCCCTGACCACCCCACCCCCGGGTCCTCAGTTACTTTCTT TCCCATCTGAACCTCACACCAGCCCCCTCTCTGCACGTGTAACCATCCTT TCTCTTGCACGCGCAAAAAACAAGAAAATTAGAAGGCGGATTGACATGTC CCGCTATCACTTACGTCTAGCCATCACTCATGTTCCCTCCCCCCCTCTCT GCCTCCGTCTGTCGGTCCCTCCCACGCCTCAACTGTCAGAAGACACGGTC GAACGCACTCTTTGCCAAATTCGGACCGTGCACGTCTTCAAGATCCCTCC CCGTCTTAGTGCTGGGGGCTACCGAGCCTCCGACTGGAAGGAGGAAGTGT GGCAAGGCGCCTTAAAGGTTGTGCAAAAGGGGTTGGACGCCGCCATCTTG CTGATTGACCCCAAAAATGGTAAGGCTCAGGATTACGCGGCTTCCCCCCT TCTTTGGTTTCTGTTGTTTCTTGATTCTTGGACTCTGCTCTGTGGTTGGA ACAGTGTCCCTCTATTTCCTCTCGCCACCTCATTCCTCTCTCCCCCTTCT CATCTTTGGCCGCTTTTCCTTGCTGGGGTCGAGCCTTGAGACTAGAAAGT GAAAAGTGGTGAAAGTCATCCTCCCTCCCTCTCTCCCTTTTTTTGCCCTC CCTCCTATGTACAGGCTCACTCTTCGCCATGTGCCCCATCAAGGAAGGAT CTGTCGAACGCTGCGTCGACTCCAGCCGGTATTTTGTCTTGAAAATTCAA AATGCCTCGGGTCGACATGCCTTCGTGGGTGTGGCTTTCAATGAACGCGA GGAGGCCTTTGACTTCAATGTGGCCATGCAGGAGTACGAGAAAGACAAAG CGCGGACTGAGAGGTTGAGGACGAGGGGAAAGGAGAGTGAGGAGGAGGAC GGGAGGGAGGGAGGAGGGCCCAAGGTGGATTTGAGTCTGAAGGAAGGCGA AAAGCTGACGATCAGGTTGCCCACCCGCGAGGGAGGGGTTGGGGCCACGA CGGGAGGGGAGAGGAAGAAGAGGGTGACAGGTGGTGGTGGGGGTATAACC AGTGGGGGAGGTTTGTTGCCTCCACCGCCGGGGTCGTCGTGGGGAGGCTT GCTTGCCCCCCCTGCCTCCGTCTCGTCAGCACCAGCGGTGAGGAGGGCAC AAACGGGCGCGGCAGCTCATGATGACTTTCTGGCTGGGTCTGGCACTAGA GTGACCGCAACGACGGGATGGAAAGATGGTGATGCTGTTGCTTCCCCCCC CCTTTTGCCCCCCTTGGCTCCTCGTTTGCTTCCTCCTCCTCTTCCTCCTC CTCGGCGACAAGCAAGGACGACTTTGGCGGCTTCATGGCCCCTGTCAAGT CCTCCCTCTCCCTCACCCCCACATTTTCTGCTTTTTCCAGCACCGGCTCT GACTCCGTGGACGTTGGCGGTGCTGCTCCTTGCTCCAAGAGTGCCACTGG CCCGGAGTCTGCGAAACCCTCTCCCTTCGATAGCCTGAGTGCCCTCGGTG CAGGCCTGCCGGGCATGACCAGCGGCAACAGCAACAGCAGCAAGAGCAGT GATCCTTTCGCGGACTTGCTGCCGTTCAGGTGAGTTGTCGGCGGCAGGAA AGTGGAGGAAAAGAGGGAGGGATGGAGGGCAGGGAGGGCAGGGAAGGTTG AAGCGAGGGAGGGGAGGGGAGGTTGTGATGTGTTGATGGTAGAGCGCCGT TGCATAAATTTGATAGAGGAGATAGAAGGAAGCAAACGGGATAAACATAG TATATTACTGAGTCCAGACTAGAGACGGCAGCAACAGTAGGACGTAGCAG AGCAACACGAGACAAAGCACCTTTGATTATCGACAGGAAGAGAATAGAGA GCACGGACAGACTTGCTTACATACATACAACAAAATTTATGCATCGAAAA TTATGTTTGCTCATATACAACCAACCAGCCGTCACGGAGGGGTAAGAGAC GATGGAACGAGGAGGAAGCGGAGGACGGACAGACAGAAGAAAGGTGAAGA GTGGAAAGGTAGGATGTGTGTGGAGGCACCCTGACTGTACTTTCATGGCT TATTTACGTGTGAGATGATAGACGTGTTAGATAACAACATGGAATACGAT ATTAAACATTTAGAGAAGAGCAGAGCTTTGCCCCAGAGAAAATCCGTACA CAAACGAAATAACAAGAGAACATAACAATAAGAGCATTTTCCCCCCCCTA TCTTTCCCGATTTTTTTTTGTCTCTTCGCGCGGCACAATTATCTTTATCT TCTCTCAGCCATTCCTTCCTGCCGTCTAGACTCCTATTCTCTCACTTCCT TTTCCCTCTCATCTCTCCCTTCTCGCCCCTTTTTTCAATTTGCTTTTTAC TGGCCACCTAATTTTAAGTATACTTTGTTTAGCTTACCGTTTTTACACAC TCTTTTTCTCTGTCCAAGAAATATATCTATGGATTTCCGACTTTAGACTC CAACTGTGTGCTTGATTTTGTAGCCACTCACGGACTCGCTGCCTCCCAGG GACGGAACACCGTCTTCATCTCTAATGCGCGATTACACACCCACATCAGC ACGTTCGTCATCCCATCAAAGAAGGACTGTCTATATCTTGATTAACCCGC GCGCAAAGCTTGTCACCGATGGAAACATCGCATTTACCTTCACCGCATCC GTTACGTACCGCATGTTCCTACACCCAAGCAACACACACGTCACCCCCTC CCTTGCCAGCAGCCATTCCACGGCGAATTCCTGCAGAGACTTCCCCTCCG GCAACCTCCCGAAACCCAATTCCCCCTCCACCACCTCCCGCGCATGCGTT CCACTATGAAAGCTCACAAACCGCTTACACGCGTCCAGGAAGTCTTGAGC AAGCCTCATCGCCTGGGTGTCAAACGTCCCTTCGGCATTCGCTGTCGCTT GCAAGCCCCGACGGAGGGCAGGAACAATTGACTGCGACGACAAATTTTCC CAACTCAAGACGTTGATTTTACCTTCTCCCGCTTGCTTTTGCAGGTAAGT ATCGATTTCTTCGATCTCTGGGCGAAAGATAACGCGAAAGTTATCTGCGC CCTTGTCCTCGGCGACGGCGTCGAGATAAGCAAGGAGAACATTACGTGCT TCCTCATAGGCAGGACGGGTATCTTCGTATTCAGCCAGCCGCAAACTCAT CCGATCATTGAAGGCGTTTAAAGGACGGTTGATCAAGACCATCAGCCCAT TCTGCGCCGCCCAGTCCGCGGCATGATCCAGCCCCTCTTGTTCCAACAAA TTTCCCGGCAGTTGAATCGTACTGAAATGATGCTTTGGCGCACGCTCCTC ACCTTCCACCTCTTCCTCTCCTTCAACCTGAGAGGCTACAGCCTTGGCTG CCCTCTGTGCCATTTCCACCAGGTGGTCGTACTTCAAAAAGTGCGGGTGT GTTGGAGGCAACGAAAACGAATTGGACGAGATCCCATAGCTCTCAATACG ACCTTGACCGCTAGCAATCTCTGCTTCCATGGCCTTGAAAGCTTCGAACA GACGACGATCCATCTCCGCTCGATGGTCCTCCAGAGCCGCATCGCTGATA TCCCGGCGCCCTGCCGGGATGTTGTGCGTGAGATAGTACTCGGGGTTGTG CAGTAGGAATACGTCCAAGGAGGGCAGGTTGAGGCGATCCAAGGAGCGAT TAAGTTGATCTTGAAGAAAGGCCGGGTGGATGCAATGTGCGAGATAGGAA GCAACTTCAACGGTATCGGGGGTCTTGACGGTGCCATCTTGGTATCGTTC CATGTTTTGTCCTTGAATGTACCCCGCTTTACTCACGATCACCACATCCT GTCGCTGGATGGCCCCTTCCTCGATGAGCGTTTTCATTACTTCGCCAACG ACTTCTTCGGCTTCACCGTTACCGTAATTGGCGGAAGTATCAATAAGGTT AATGCCCTGCAGCAAAGCTTGACGGAGGGACCCGGCTTGCTCCTCGGAAT TGTGGCCGATTCGATAGGTTCCATAACCAATTCGAGAGATAGGCAGAATC ATGCCTACATCGGAGCCAGGAATACTGTTGAGAGATGCAGTATCGGTGGC GGAATTGTCCGTCGTAGTGGTGGTATTGGCAGCGGCAGTGGTGCAGACGT TGGTGTTGCTGGAGCTGCTTGTGATTCCAGTATTTGGCATGCCGGGGAGG ACAAAGCCTGAGATGGCGACTACGGCAAGCAGGAGCAGCAGTGGCAGCGT CGGGAAATAAGGTAGGGGCATTCGTTTGTCCTTGTTGT
back to top

Coding sequence (CDS) from alignment at chr16:727374..732861-

>NO16G02530.1 ID=NO16G02530.1|Name=NO16G02530.1|organism=Nannochloropsis oceanica|type=CDS|length=1023bp|location=Sequence derived from alignment at chr16:727374..732861- (Nannochloropsis oceanica)
ATGGCTTCTTACGCAGACGAAGACACGGTCGAACGCACTCTTTGCCAAAT
TCGGACCGTGCACGTCTTCAAGATCCCTCCCCGTCTTAGTGCTGGGGGCT
ACCGAGCCTCCGACTGGAAGGAGGAAGTGTGGCAAGGCGCCTTAAAGGTT
GTGCAAAAGGGGTTGGACGCCGCCATCTTGCTGATTGACCCCAAAAATGG
CTCACTCTTCGCCATGTGCCCCATCAAGGAAGGATCTGTCGAACGCTGCG
TCGACTCCAGCCGGTATTTTGTCTTGAAAATTCAAAATGCCTCGGGTCGA
CATGCCTTCGTGGGTGTGGCTTTCAATGAACGCGAGGAGGCCTTTGACTT
CAATGTGGCCATGCAGGAGTACGAGAAAGACAAAGCGCGGACTGAGAGGT
TGAGGACGAGGGGAAAGGAGAGTGAGGAGGAGGACGGGAGGGAGGGAGGA
GGGCCCAAGGTGGATTTGAGTCTGAAGGAAGGCGAAAAGCTGACGATCAG
GTTGCCCACCCGCGAGGGAGGGGTTGGGGCCACGACGGGAGGGGAGAGGA
AGAAGAGGGTGACAGGTGGTGGTGGGGGTATAACCAGTGGGGGAGGTTTG
TTGCCTCCACCGCCGGGGTCGTCGTGGGGAGGCTTGCTTGCCCCCCCTGC
CTCCGTCTCGTCAGCACCAGCGGTGAGGAGGGCACAAACGGGCGCGGCAG
CTCATGATGACTTTCTGGCTGGGTCTGGCACTAGAGTGACCGCAACGACG
GGATGGAAAGATGGTGATGCTGTTGCTTCCCCCCCCCTTTTGCCCCCCTT
GGCTCCTCGTTTGCTTCCTCCTCCTCTTCCTCCTCCTCGGCGACAAGCAA
GGACGACTTTGGCGGCTTCATGGCCCCTGTCAAGTCCTCCCTCTCCCTCA
CCCCCACATTTTCTGCTTTTTCCAGCACCGGCTCTGACTCCGTGGACGTT
GGCGGTGCTGCTCCTTGCTCCAAGAGTGCCACTGGCCCGGAGTCTGCGAA
ACCCTCTCCCTTCGATAGCCTGA
back to top
Synonyms
Publications