NO16G02390, NO16G02390 (gene) Nannochloropsis oceanica

Overview
NameNO16G02390
Unique NameNO16G02390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2475
Alignment locationchr16:687328..689802 +

Link to JBrowse

Properties
Property NameValue
DescriptionAuxin efflux carrier-like protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:687328..689802 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR004776Auxin_eff
Homology
BLAST of NO16G02390 vs. NCBI_GenBank
Match: EWM23919.1 (auxin efflux carrier-like protein [Nannochloropsis gaditana])

HSP 1 Score: 515.8 bits (1327), Expect = 1.200e-142
Identity = 269/351 (76.64%), Postives = 308/351 (87.75%), Query Frame = 0
Query:   26 QQHPSLLDVRGGAMVTLDPVVVKASMTAVGELLIACSIGAFFTRRGILDRNAIASLSSIVYHILLPSLLVVNVAKTVYATPLLTLLPLPLFGTMQIILCSCIAWVVTWLLGVDVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHPDPSVLPLAISYISFYLLGWTPIFWTYGYNLLVDSPPLSPESVDERAAITSLADKAKYLFKNPPPVLKRVASPPIIGSVGGLLLGISPLAKLFLGPAAPLGMLTNAIQTIGSAYTSMGLLVLAGSLALPLPALSAAEKVAEAGEVVRVSKGKAIPIWRQIASVCLVRFCLCPALCLSIILRSMSTGFIKLDRLMVFVLFLQSCMP 377
            +Q  +LL VRGG++  LDPVVVKAS+TAVGELL+AC IGA+FTRRGIL R AIA+LSSIVYHILLPSLLVVNVAKTVY TPL TLLPLPLFGTMQI+LCSCIAWVVT+L+G DVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHPDPSVLPLAISYISFYLLGWTPIFWTYGY+LLV +   + +S+ E+ ++ +LAD+ KY  ++PP  +KR+ SPPI+GS+GGL +G+SPLAKLFLGP APLG+LTNA+QTIGSAYTSMGLLVLAGSLALPLP  S  E+V+ A       + K+I  + QIASVCLVRFCLCPALCLSIILR+MSTG++KLDRLMVFVLFLQSCMP
Sbjct:   77 EQSSALLSVRGGSVANLDPVVVKASLTAVGELLVACGIGAWFTRRGILGREAIANLSSIVYHILLPSLLVVNVAKTVYTTPLRTLLPLPLFGTMQILLCSCIAWVVTFLMGADVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHPDPSVLPLAISYISFYLLGWTPIFWTYGYSLLVPAEAPTAQSIAEKESVVTLADRIKYFIRHPPATIKRILSPPIVGSLGGLCVGVSPLAKLFLGPRAPLGILTNAVQTIGSAYTSMGLLVLAGSLALPLPTPSPLEEVSGA-------ESKSIHPYLQIASVCLVRFCLCPALCLSIILRAMSTGWVKLDRLMVFVLFLQSCMP 420          
BLAST of NO16G02390 vs. NCBI_GenBank
Match: EWM23920.1 (auxin efflux carrier-like protein [Nannochloropsis gaditana])

HSP 1 Score: 515.8 bits (1327), Expect = 1.200e-142
Identity = 269/351 (76.64%), Postives = 308/351 (87.75%), Query Frame = 0
Query:   26 QQHPSLLDVRGGAMVTLDPVVVKASMTAVGELLIACSIGAFFTRRGILDRNAIASLSSIVYHILLPSLLVVNVAKTVYATPLLTLLPLPLFGTMQIILCSCIAWVVTWLLGVDVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHPDPSVLPLAISYISFYLLGWTPIFWTYGYNLLVDSPPLSPESVDERAAITSLADKAKYLFKNPPPVLKRVASPPIIGSVGGLLLGISPLAKLFLGPAAPLGMLTNAIQTIGSAYTSMGLLVLAGSLALPLPALSAAEKVAEAGEVVRVSKGKAIPIWRQIASVCLVRFCLCPALCLSIILRSMSTGFIKLDRLMVFVLFLQSCMP 377
            +Q  +LL VRGG++  LDPVVVKAS+TAVGELL+AC IGA+FTRRGIL R AIA+LSSIVYHILLPSLLVVNVAKTVY TPL TLLPLPLFGTMQI+LCSCIAWVVT+L+G DVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHPDPSVLPLAISYISFYLLGWTPIFWTYGY+LLV +   + +S+ E+ ++ +LAD+ KY  ++PP  +KR+ SPPI+GS+GGL +G+SPLAKLFLGP APLG+LTNA+QTIGSAYTSMGLLVLAGSLALPLP  S  E+V+ A       + K+I  + QIASVCLVRFCLCPALCLSIILR+MSTG++KLDRLMVFVLFLQSCMP
Sbjct:   91 EQSSALLSVRGGSVANLDPVVVKASLTAVGELLVACGIGAWFTRRGILGREAIANLSSIVYHILLPSLLVVNVAKTVYTTPLRTLLPLPLFGTMQILLCSCIAWVVTFLMGADVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHPDPSVLPLAISYISFYLLGWTPIFWTYGYSLLVPAEAPTAQSIAEKESVVTLADRIKYFIRHPPATIKRILSPPIVGSLGGLCVGVSPLAKLFLGPRAPLGILTNAVQTIGSAYTSMGLLVLAGSLALPLPTPSPLEEVSGA-------ESKSIHPYLQIASVCLVRFCLCPALCLSIILRAMSTGWVKLDRLMVFVLFLQSCMP 434          
BLAST of NO16G02390 vs. NCBI_GenBank
Match: CBJ28108.1 (AEC family transporter: auxin efflux [Ectocarpus siliculosus])

HSP 1 Score: 180.6 bits (457), Expect = 8.800e-42
Identity = 126/357 (35.29%), Postives = 194/357 (54.34%), Query Frame = 0
Query:   42 LDPVVVKASMTAVGELLIACSIGAFFTRRGILDRNAIASLSSIVYHILLPSLLVVNVAKTVYATPLLTLLPLPLFGTMQIILCSCIAWVVTWLLGVDVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHPDPSVLPLAISYISFYLLGWTPIFWTYGYNLL---------------------VDSPPLSPESVDERAAITSLADKAKYLFKNPPPVLKRVASPPIIGSVGGLLLGIS-PLAKLFLGPAAPLGMLTNAIQTIGSAYTSMGLLVLAGSLALPLPALSAAEKVAEAGEVVRVSKGKAIPIWRQIASVCLVRFCLCPALCLSIILRSMSTGFIKLDRLMVFVLFLQSCMP 377
            ++PVVVKAS  AV ELL  C +G    ++GIL    +A+LS IVY I LPSLL+VNVAKT  +  + +LLP+P F  +QI L   I+ V   LL ++ ++  GR+ ++   F N G+ P++F   + R  P+  +L   ++Y SFYL+GW+P FWT G N+L                     V + P +  S+ +R A  +L  K K + ++  P ++RV SPPI+  + GL++G+S PL  L +   APLG + +A   + +AYT  G+LVLAGSLA   P                  K  +    + I +V + R+ L P +   ++   +  G +  D +++FVL ++SCMP
Sbjct:  130 INPVVVKASARAVSELLCCCVLGVVAAKKGILTPVNVAALSKIVYGIFLPSLLMVNVAKTCVSQSVASLLPIPAFAGIQIALGLAISGVAMRLLRINPDTEAGREAKMCMAFQNSGILPLIFLNAMFRGSPE--LLSRGVAYASFYLMGWSPTFWTIGNNILTGHVHQDKGGGGKKNSAAEGDVAAVPKAKLSLFKRVA--NLPSKVKSIAES--PAVRRVLSPPIVACMTGLVIGLSPPLRWLLMREGAPLGPMWSAFSNLTAAYTPSGVLVLAGSLANCPP-----------------GKWFSRDTKKTILAVGMARWFLLPLVTSGLLFGGVKYGLVPPDPMLLFVLLIESCMP 463          
BLAST of NO16G02390 vs. NCBI_GenBank
Match: EWM26539.1 (membrane transporter [Nannochloropsis gaditana])

HSP 1 Score: 161.0 bits (406), Expect = 7.200e-36
Identity = 118/345 (34.20%), Postives = 178/345 (51.59%), Query Frame = 0
Query:   40 VTLDPVVVKASMTAVGELLIACSIGAFFTRRGILDRNAIASLSSIVYHILLPSLLVVNVAKTVYATPL---LTLLPLPLFGTMQIILCSCIAWVVTWLLGVDVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHP-DPSVLPLAISYISFYLLGWTPIFWTYGYNLL--VDSPPLSPESVDERAAITSLADKAKYLFKNPPPVLKRVASPPIIGSVGGLLLGISP-LAKLFLGPAAPLGMLTNAIQTIGSAYTSMGLLVLAGSLALPLPALSAAEKVAEAGEVVRVSKGKAIPIWRQIASVCLVRFCLCPALCLSIILRSMSTGFI-KLDRLMVFVLFLQSCMP 377
            + + P   K S+ AV  L+ +C +G      G+LD+ ++++LS +++    P+LL  NVA T+ ATP     +LL LP F  +QI+        +   L +D  S  G++L V   F N G  P+LFA    R HP DP++ P A++YISFYL+ W+P+FWT G  +L    S P   +S         L  +  +      P+L++  SPP +G + G L+G +P L  +F GP APL  L +A++T+GSAY    LLVLAGSLA    +L+  +                  +  +  ++C  RF L PA    ++    +   I   D L+ FVL LQ+CMP
Sbjct:  110 LVIQPTAFKTSVNAVLRLVASCGLGLGAASHGLLDQASLSTLSRLIFAFFQPALLFTNVATTL-ATPSSYGSSLLVLPAFAVLQILFGFLYGKGMAASLRLDPASDAGKELAVCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTILGSSTSQPAYAKSPXXXXXXXXLPSRLLH-----HPLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLAQGFKSLNLKDPA----------------LLSRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMP 432          
BLAST of NO16G02390 vs. NCBI_GenBank
Match: EWM26540.1 (membrane transporter [Nannochloropsis gaditana])

HSP 1 Score: 161.0 bits (406), Expect = 7.200e-36
Identity = 118/345 (34.20%), Postives = 178/345 (51.59%), Query Frame = 0
Query:   40 VTLDPVVVKASMTAVGELLIACSIGAFFTRRGILDRNAIASLSSIVYHILLPSLLVVNVAKTVYATPL---LTLLPLPLFGTMQIILCSCIAWVVTWLLGVDVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHP-DPSVLPLAISYISFYLLGWTPIFWTYGYNLL--VDSPPLSPESVDERAAITSLADKAKYLFKNPPPVLKRVASPPIIGSVGGLLLGISP-LAKLFLGPAAPLGMLTNAIQTIGSAYTSMGLLVLAGSLALPLPALSAAEKVAEAGEVVRVSKGKAIPIWRQIASVCLVRFCLCPALCLSIILRSMSTGFI-KLDRLMVFVLFLQSCMP 377
            + + P   K S+ AV  L+ +C +G      G+LD+ ++++LS +++    P+LL  NVA T+ ATP     +LL LP F  +QI+        +   L +D  S  G++L V   F N G  P+LFA    R HP DP++ P A++YISFYL+ W+P+FWT G  +L    S P   +S         L  +  +      P+L++  SPP +G + G L+G +P L  +F GP APL  L +A++T+GSAY    LLVLAGSLA    +L+  +                  +  +  ++C  RF L PA    ++    +   I   D L+ FVL LQ+CMP
Sbjct:   83 LVIQPTAFKTSVNAVLRLVASCGLGLGAASHGLLDQASLSTLSRLIFAFFQPALLFTNVATTL-ATPSSYGSSLLVLPAFAVLQILFGFLYGKGMAASLRLDPASDAGKELAVCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTILGSSTSQPAYAKSPXXXXXXXXLPSRLLH-----HPLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLAQGFKSLNLKDPA----------------LLSRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMP 405          
BLAST of NO16G02390 vs. NCBI_GenBank
Match: GAX22255.1 (uncharacterized protein FisN_19Lh325 [Fistulifera solaris])

HSP 1 Score: 141.0 bits (354), Expect = 7.700e-30
Identity = 114/340 (33.53%), Postives = 171/340 (50.29%), Query Frame = 0
Query:   41 TLDPVVVKASMTAVGELLIACSIGAFFTRRGILDRNAIASLSSIVYHILLPSLLVVNVAKTVYATPLL---TLLPLPLFGTMQIILCSCIAWVVTWLLGVDVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHPDPSVLPLAISYISFYLLGWTPIFWTYGYNLLVDSPPLSPESVDERAAITSLADKAKYLFKNPPPVLKRVASPPIIGSVGGLLLGISP-LAKLFLGPAAPLGMLTNAIQTIGSAYTSMGLLVLAGSLALPLPALSAAEKVAEAGEVVRVSKGKAIPIWRQIASVCLVRFCLCPALCLSIILRSMSTGFIKLDRLMVFVLFLQSCMP 377
            +L+PVVVKAS++A  +LL A  IG    +R ILD+NA+ +LS + YH+  P+ L V+VA+T+ +       +L  +P+ G +QI + + +A V +     D      R +++  TF N G  P++F+  LL   P   +  +A + +SFYLL W+P+FWT+G  +L  +      S  E  A  S   +           +K+  SPP+IGS+ G+LLG  P L  LF G    L  +T A QT+G+AY    +LVLAGSL LP   L       E    +   K    P     A+  +V   L   +C  +I   +  G      +  F+L LQ C P
Sbjct:   57 SLNPVVVKASLSATAQLLSALGIGGMLAKRNILDKNAVKALSKLTYHVFQPTFLFVSVARTLRSVSNAQKPSLWIMPIAGVVQIAIGASLALVTSRFFRDDTTR---RHVQMCTTFANAGPLPLIFSAALLEGSP---LAGMAAAAVSFYLLAWSPLFWTFGKIILSGT-----SSKTENGASNSPLQRV-------VTGIKQFLSPPVIGSLIGMLLGSVPRLGNLFFG--GFLQPVTGACQTLGTAYLPAVMLVLAGSLVLPQDDL-------ENSTAISFKKASPWPFVTLFATRFIVMPLLAYTMCRLLIGAGLLGGHSARSAIFHFILLLQGCTP 369          
BLAST of NO16G02390 vs. NCBI_GenBank
Match: GAX19737.1 (uncharacterized protein FisN_19Hh325 [Fistulifera solaris])

HSP 1 Score: 141.0 bits (354), Expect = 7.700e-30
Identity = 116/341 (34.02%), Postives = 170/341 (49.85%), Query Frame = 0
Query:   42 LDPVVVKASMTAVGELLIACSIGAFFTRRGILDRNAIASLSSIVYHILLPSLLVVNVAKTVYAT-----PLLTLLPLPLFGTMQIILCSCIAWVVTWLLGVDVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHPDPSVLPLAISYISFYLLGWTPIFWTYGYNLLVDSPPLSPESVDERAAITSLADKAKYLFKNPPPVLKRVASPPIIGSVGGLLLGISP-LAKLFLGPAAPLGMLTNAIQTIGSAYTSMGLLVLAGSLALPLPALSAAEKVAEAGEVVRVSKGKAIPIWRQIASVCLVRFCLCPALCLSIILRSMSTGFIKLDRLMVFVLFLQSCMP 377
            L+PVVVKAS++A  +LL A  IG    +R ILD+NA+ +LS + YHI  P+ L V+VA+T+ +      P L ++P+   G +QI + + +A V +     D      R +++  TF N G  P++F+  LL   P   +  +A + +SFYLL W+P+FWT+G  +L       P S     A  S   K           LK+  SPP+IGS+ G+LLG  P L  LF G    L  +T A QT+G+AY    +LVLAGSL LP       +  +E    +   K    P     A+  +V   L   +C  +I   +         +  F+L LQ C P
Sbjct:   58 LNPVVVKASLSATAQLLSALGIGGMLAKRNILDKNAVKALSKLTYHIFQPTFLFVSVARTLRSVSDAQKPSLWIMPIA--GIVQIAIGATLAMVTSRFFRDDTTR---RHVQMCTTFANAGPLPLIFSAALLEGSP---LAGMAAAAVSFYLLAWSPLFWTFGKIIL-----SGPSSNTVNGASDSPLQKV-------VSGLKQFLSPPVIGSLIGMLLGSVPRLGNLFFG--GVLQPVTGACQTLGTAYLPAVMLVLAGSLVLP-------QDDSEQSTAISSKKSSPWPFVTLFATRFMVMPLLAHTMCRLLIGAGLLGEHSARSAIFHFILLLQGCTP 369          
BLAST of NO16G02390 vs. NCBI_GenBank
Match: CEL97139.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 140.6 bits (353), Expect = 1.000e-29
Identity = 114/367 (31.06%), Postives = 171/367 (46.59%), Query Frame = 0
Query:   47 VKASMTAVGELLIACSIGAFFTRRGILDRNAIASLSSIVYHILLPSLLVVNVAKTVY--ATPLLTLLPLPLFGTMQIILCSCIAWVVTWLLGVDVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHPDPSVLPLAISYISFYLLGWTPIFWTYGYNLLVDSPPLS-PESVDE---------------------------------RAAITSLADKAKYLFKNPPPVLKRVASPPIIGSVGGLLLGISPLAK-LFLGPAAPLGMLTNAIQTIGSAYTSMGLLVLAGSLALPLPALSAAEKVAEAGEVVRVSKGKAIPIWRQIASVCLVRFCLCPALCLSIILRSMSTGFIKLDRLMVFVLFLQSCMP 377
            ++AS  AV ELL    IGA   +R  LD+ A + LS +V ++  P+ L  ++A T+   A  +  LLPLP F   QIIL S +   +  +L +   S  GR+L++L +F N G  PILF   L R+HPDPSV+    SYI+FYL    P+ W+YGY++L   P       VDE                                 R+    +    K L+ +  P   R+ SP +I  + G+++G SPL + + + P APL  +  A+Q +G  +     LVLAGS   P           E+  V+ +        +R++  V   RF   P +  +++      G I  D  + FVL +Q CMP
Sbjct:   94 LEASSKAVLELLALIGIGA--AKRDDLDQAARSVLSKLVRNVFQPAFLCTSIAATLASPAARVRDLLPLPFFCASQIILGSFVGEALLRILRISPKSQSGRRLKMLCSFSNAGPLPILFTNALFRDHPDPSVMAKVNSYIAFYLTVQAPMMWSYGYSILAGMPTRPVKHHVDEDDPQWADAFADWGMSPSLEQVPPXXXXXXXXXPRSLFLQVRRTVKQLWLH--PFRPRLLSPAVISCLAGIVIGTSPLLRQMLVAPGAPLTFIWGALQILGQGFRPAAALVLAGSFVTP--------SGGESDTVISLRN------FRRVLPVAFARFVCAPTIAFTLLTIGRRLGLIMNDPFLWFVLLMQGCMP 442          
BLAST of NO16G02390 vs. NCBI_GenBank
Match: XP_005761646.1 (hypothetical protein EMIHUDRAFT_452869 [Emiliania huxleyi CCMP1516] >EOD09217.1 hypothetical protein EMIHUDRAFT_452869 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 124.8 bits (312), Expect = 5.700e-25
Identity = 102/369 (27.64%), Postives = 161/369 (43.63%), Query Frame = 0
Query:   42 LDPVVVKASMTAVGELLIACSIGAFFTRRGILDRNAIASLSSIVYHILLPSLLVVNVAKTVYATPL-LTLLPLPLFGTMQIILCSCIAWVVTWLLGVDVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHPDPSVLPLAISYISFYLLGWTPIFWTYGYNLLVDSPPLSPESVDERAAITSLADKAKYLFKNPPPV-------------------------LKRVASPPIIGSVGGLLLGISPLAKLFLGPAAPLGM--------LTNAIQTIGSAYTSMGLLVLAGSLALPLPALSAAEKVAEAGEVVRVSKGKAIPIWRQIASVCLVRFCLCPALCLSIILRSMSTGFIKLDRLMVFVLFLQSCMP 377
            ++PV+++ +  ++ ELL +C+IG   T+ G L  + I SL+ +V+++ LP++L+ +VA TV        L  +P+    Q+ + + +A V   LL +   S+ GR + VL +FGN GV P+LF + L R     +    A S ++ +LLGW+P+FWT GY LL     LS                                                    L+R  SPPI   + GL++G                         L   ++ +G AY+   LLVLAGSLA P              E  R  +G+       + ++ + RFC  P L  +++  ++  G +  D L   VL LQSCMP
Sbjct:   61 VNPVILRLTRDSMAELLTSCAIGYGATKAGYLSGSQIRSLAGVVFNVFLPAMLLTSVASTVAEQQAGAALAVMPIAAWAQVAVGASVASVSLALLRLPRRSSAGRGVSVLSSFGNAGVLPLLFVSSLFRGAAQEATRRRATSLVAMFLLGWSPLFWTLGYALLTGHAALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLRRALSPPIAACLAGLVVGXXXXXXXXXXXXXXXXXXXXXSWLPLFRCLEALGKAYSPAALLVLAGSLAAPT-------------EQRRAGEGELGASASHVVAIAVARFCAVPLLSFALLHAALRAGLLPADPLRDLVLLLQSCMP 416          
BLAST of NO16G02390 vs. NCBI_GenBank
Match: XP_005757099.1 (hypothetical protein EMIHUDRAFT_453794 [Emiliania huxleyi CCMP1516] >EOD04670.1 hypothetical protein EMIHUDRAFT_453794 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 124.4 bits (311), Expect = 7.500e-25
Identity = 102/370 (27.57%), Postives = 161/370 (43.51%), Query Frame = 0
Query:   42 LDPVVVKASMTAVGELLIACSIGAFFTRRGILDRNAIASLSSIVYHILLPSLLVVNVAKTVYATPL-LTLLPLPLFGTMQIILCSCIAWVVTWLLGVDVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHPDPSVLPLAISYISFYLLGWTPIFWTYGYNLLVDSPPLSPESVDERAAITSLADKAKYLFKNPPPV--------------------------LKRVASPPIIGSVGGLLLGISPLAKLFLGPAAPLGM--------LTNAIQTIGSAYTSMGLLVLAGSLALPLPALSAAEKVAEAGEVVRVSKGKAIPIWRQIASVCLVRFCLCPALCLSIILRSMSTGFIKLDRLMVFVLFLQSCMP 377
            ++PV+++ +  ++ ELL +C+IG   T+ G L  + I SL+ +V+++ LP++L+ +VA TV        L  +P+    Q+ + + +A V   LL +   S+ GR + VL +FGN GV P+LF + L R     +    A S ++ +LLGW+P+FWT GY LL     LS                                                     L+R  SPPI   + GL++G                         L   ++ +G AY+   LLVLAGSLA P              E  R  +G+       + ++ + RFC  P L  +++  ++  G +  D L   VL LQSCMP
Sbjct:   61 VNPVILRLTRDSMAELLTSCAIGYGATKAGYLSGSQIRSLAGVVFNVFLPAMLLTSVASTVAEQQAGAALAVMPIAAWAQVAVGASVASVSLALLRLPRRSSAGRGVSVLSSFGNAGVLPLLFVSSLFRGAAQEATRRRATSLVAMFLLGWSPLFWTLGYALLTGHAALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLRRALSPPIAACLAGLVVGXXXXXXXXXXXXXXXXXXXXXSWLPLFRCLEALGKAYSPAALLVLAGSLAAPT-------------EQRRAGEGELGASASHVVAIAVARFCAVPLLSFALLHAALRAGLLPADPLRDLVLLLQSCMP 417          
The following BLAST results are available for this feature:
BLAST of NO16G02390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23919.11.200e-14276.64auxin efflux carrier-like protein [Nannochloropsis... [more]
EWM23920.11.200e-14276.64auxin efflux carrier-like protein [Nannochloropsis... [more]
CBJ28108.18.800e-4235.29AEC family transporter: auxin efflux [Ectocarpus s... [more]
EWM26539.17.200e-3634.20membrane transporter [Nannochloropsis gaditana][more]
EWM26540.17.200e-3634.20membrane transporter [Nannochloropsis gaditana][more]
GAX22255.17.700e-3033.53uncharacterized protein FisN_19Lh325 [Fistulifera ... [more]
GAX19737.17.700e-3034.02uncharacterized protein FisN_19Hh325 [Fistulifera ... [more]
CEL97139.11.000e-2931.06unnamed protein product [Vitrella brassicaformis C... [more]
XP_005761646.15.700e-2527.64hypothetical protein EMIHUDRAFT_452869 [Emiliania ... [more]
XP_005757099.17.500e-2527.57hypothetical protein EMIHUDRAFT_453794 [Emiliania ... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL153nonsL153Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR035ngnoR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003178NSK003178Nannochloropsis salina (N. salina CCMP1776)gene


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593860gene_6134Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100082g19gene6531Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G02390.1NO16G02390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO16G02390.2NO16G02390.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO16G02390.3NO16G02390.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO16G02390.4NO16G02390.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G02390.1NO16G02390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO16G02390.2NO16G02390.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO16G02390.3NO16G02390.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO16G02390.4NO16G02390.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G02390 ID=NO16G02390|Name=NO16G02390|organism=Nannochloropsis oceanica|type=gene|length=2475bp
TAAATCTCTTCATTAAGCTATTTTTTACTTTGTCCTTGCCTTGTACCGGA
AGACCGTAGAGGTCCATCGAGGCCCATGTGCACGCGGGCTGAAGTCAGCG
ACTGCAGCGGATTGCAGCACGTGGTAGGTGGTAGGGTCGAGTTCTATAAA
GAAGTATCCCACCCAACCCCTCTCGAGGCGCTATTGCTCCACACTTGCCT
GAATTTGGCTTCTTACCATCAAGCCCGGAATATCCAATCCTTTCTCGCAA
AAGTGTCAGCAGCCAGCCAGGACCAAGGAGTATCACGTCTAGAAGGCACG
CTACTCGGACCCTCACGACCTCATCATGGCCTTTGCACTGGGACTATTTA
TGCTGCTCATGGTGCCTGGATCGTCCATCGCTAGACTGCGTACGACAGGG
AGCATGGTACGTGGTGCAGTGTGCTTATGGCGGGTGGGAGGTTACTTATG
AGCCCATGGGATGAGATATTCTACACGGTACGGCATCGGCTTGCTCAGGT
GCGAGTCATATAAACTCTTCCCTAGGGTATAACATGTCCTCACTCAACTT
CTTTTCCTTAAGCCGGCATATCGGCAGAGGAGATGCACTCCTCGACACAT
CTCGTCAATCACGGGCTTTGTCTCTTCATCCCGACCTTGGCAAGCAGTCA
GCTCATCCTCAGCCGGAGTGCGTGATTGTTTTCGGGCTGCAGCGACTGCA
CCTGCAGGAGACCTTTTGATGGAGTCGGAGTTGTGGCCTTTGCTTCGGCG
GCACCGCCACATTCAACACAACCATGAGCAACCCTCTACGCAGCAGCAAC
ACCCTTCTCTGCTCGATGTCCGCGGTGGTGCCATGGTGACCCTGGATCCC
GTAGTTGTGAAAGCTTCCATGACAGCTGTGGGTGAGCTTTTGATTGCTTG
TAGCATTGGTGCTTTTTTCACCCGCCGGGGTATCTTGGATCGAAATGCCA
TTGCCAGCTTGAGCTCAATCGTATACCACATCCTCCTACCGTCTCTTCTT
GTTGTAAATGTTGCCAAGACAGTCTATGCCACTCCCCTGCTCACGTTGCT
CCCACTTCCCCTGTTCGGTACGATGCAAATCATCCTCTGCAGCTGCATTG
CCTGGGTCGTCACTTGGTTGCTGGGCGTGGATGTGAACAGgtgcgtaaat
agatataatgcggtctgcagcgtccaaatttcactttgtcccttcaattc
gcctcacttaatgctgcattttcatacacaactatcgttcacgtgccata
caatacacacagTGCAAAAGGTCGCCAACTGCGCGTGCTCCAGACCTTTG
GCAACGGTGGCGTGGCTCCCATTCTGTTCGCTACCGTCCTGCTTCGAAAT
CACCCCGACCCGAGCGTGCTACCACTCGCCATTTCCTACATTAGTTTCTA
TCTTCTGGGATGGACGCCTATCTTTTGGACGTATGGGTATAATCTTCTAG
TTGATTCCCCACCGCTATCTCCTGAGTCCGTCGACGAGAGGGCAGCTATC
ACAAGCCTGGCGGACAAAGCCAAGTACCTTTTCAAGAACCCGCCCCCTGT
GCTCAAGCGCGTTGCCTCCCCACCCATCATCGGAAGCGTCGGGGGATTGC
TGCTGGGCATCAGTCCATTGGCCAAGCTTTTTTTGGGGCCCGCAGCTCCA
CTTGGGATGCTTACGAACGCAATTCAAACTATTGGCTCAGCCTACACAAG
CATGGGTCTCCTGGTGCTGGCCGGTAGCCTCGCCTTGCCCCTCCCAGCTC
TCTCCGCTGCAGAGAAAGTCGCCGAAGCTGGCGAGGTCGTGAGGGTCTCG
AAAGGCAAGGCCATCCCGATATGGCGTCAGATTGCCAGTGTGTGCCTCGT
GCGATTCTGTCTGTGTCCTGCGCTCTGCCTTTCCATCATTTTGCGGTCCA
TGTCTACAGGGTTCATCAAACTGGATCGGCTCATGGTGTTCGTGCTATTC
TTACAGAGCTGCATGCCGAGGTAAGCTCCCTCTGTCCCTCCGTCGCTCTC
TTTCTCCATTCTTCTACTCTATCCCTCCTTCCTCGTCCCCGCTCTTTCAC
ATTCCAGCGCACCACCTCTCTTTGTTACTGCAGTTTTCCTTCTGCCAACT
TACATTCCTCGCTTTCTTTTTTCTAGCGCACAAAACAGCGTGCTTATGGT
GCAGCTCAGCGGTCGCACTGCGGACGCCACCAAGCTAGCACGCATGCTCC
TCTTTATATATTCCCTTTCTTGCATTCCCATTTCCATCCTGTTGACGTTG
TTTTTGCAGAAATTCAGTCTGTAACTGTCCTGTTGTGACAGGTTGGTGAC
GCAGGTGGAAGTGGTTGGGAAAGGGTACAAGCACGAGGTGTGAATTCTCG
GCGACAAACAGAAATGTACTGAAATAAAAAAGAAAAGAAAAATACGCATC
AGTTGATAAGAACGCTATTTGCAAAATATTGTGGACCGCTCATGCATGCT
TCGGGACATTCGCGAAGAACACAAC
back to top

protein sequence of NO16G02390.1

>NO16G02390.1-protein ID=NO16G02390.1-protein|Name=NO16G02390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=505bp
MAFALGLFMLLMVPGSSIARLRTTGSMPAYRQRRCTPRHISSITGFVSSS
RPWQAVSSSSAGVRDCFRAAATAPAGDLLMESELWPLLRRHRHIQHNHEQ
PSTQQQHPSLLDVRGGAMVTLDPVVVKASMTAVGELLIACSIGAFFTRRG
ILDRNAIASLSSIVYHILLPSLLVVNVAKTVYATPLLTLLPLPLFGTMQI
ILCSCIAWVVTWLLGVDVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNH
PDPSVLPLAISYISFYLLGWTPIFWTYGYNLLVDSPPLSPESVDERAAIT
SLADKAKYLFKNPPPVLKRVASPPIIGSVGGLLLGISPLAKLFLGPAAPL
GMLTNAIQTIGSAYTSMGLLVLAGSLALPLPALSAAEKVAEAGEVVRVSK
GKAIPIWRQIASVCLVRFCLCPALCLSIILRSMSTGFIKLDRLMVFVLFL
QSCMPSAQNSVLMVQLSGRTADATKLARMLLFIYSLSCIPISILLTLFLQ
KFSL*
back to top

protein sequence of NO16G02390.2

>NO16G02390.2-protein ID=NO16G02390.2-protein|Name=NO16G02390.2|organism=Nannochloropsis oceanica|type=polypeptide|length=426bp
MESELWPLLRRHRHIQHNHEQPSTQQQHPSLLDVRGGAMVTLDPVVVKAS
MTAVGELLIACSIGAFFTRRGILDRNAIASLSSIVYHILLPSLLVVNVAK
TVYATPLLTLLPLPLFGTMQIILCSCIAWVVTWLLGVDVNSAKGRQLRVL
QTFGNGGVAPILFATVLLRNHPDPSVLPLAISYISFYLLGWTPIFWTYGY
NLLVDSPPLSPESVDERAAITSLADKAKYLFKNPPPVLKRVASPPIIGSV
GGLLLGISPLAKLFLGPAAPLGMLTNAIQTIGSAYTSMGLLVLAGSLALP
LPALSAAEKVAEAGEVVRVSKGKAIPIWRQIASVCLVRFCLCPALCLSII
LRSMSTGFIKLDRLMVFVLFLQSCMPSAQNSVLMVQLSGRTADATKLARM
LLFIYSLSCIPISILLTLFLQKFSL*
back to top

protein sequence of NO16G02390.3

>NO16G02390.3-protein ID=NO16G02390.3-protein|Name=NO16G02390.3|organism=Nannochloropsis oceanica|type=polypeptide|length=457bp
MAFALGLFMLLMVPGSSIARLRTTGSMPAYRQRRCTPRHISSITGFVSSS
RPWQAVSSSSAGVRDCFRAAATAPAGDLLMESELWPLLRRHRHIQHNHEQ
PSTQQQHPSLLDVRGGAMVTLDPVVVKASMTAVGELLIACSIGAFFTRRG
ILDRNAIASLSSIVYHILLPSLLVVNVAKTVYATPLLTLLPLPLFGTMQI
ILCSCIAWVVTWLLGVDVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNH
PDPSVLPLAISYISFYLLGWTPIFWTYGYNLLVDSPPLSPESVDERAAIT
SLADKAKYLFKNPPPVLKRVASPPIIGSVGGLLLGISPLAKLFLGPAAPL
GMLTNAIQTIGSAYTSMGLLVLAGSLALPLPALSAAEKVAEAGEVVRVSK
GKAIPIWRQIASVCLVRFCLCPALCLSIILRSMSTGFIKLDRLMVFVLFL
QSCMPR*
back to top

protein sequence of NO16G02390.4

>NO16G02390.4-protein ID=NO16G02390.4-protein|Name=NO16G02390.4|organism=Nannochloropsis oceanica|type=polypeptide|length=378bp
MESELWPLLRRHRHIQHNHEQPSTQQQHPSLLDVRGGAMVTLDPVVVKAS
MTAVGELLIACSIGAFFTRRGILDRNAIASLSSIVYHILLPSLLVVNVAK
TVYATPLLTLLPLPLFGTMQIILCSCIAWVVTWLLGVDVNSAKGRQLRVL
QTFGNGGVAPILFATVLLRNHPDPSVLPLAISYISFYLLGWTPIFWTYGY
NLLVDSPPLSPESVDERAAITSLADKAKYLFKNPPPVLKRVASPPIIGSV
GGLLLGISPLAKLFLGPAAPLGMLTNAIQTIGSAYTSMGLLVLAGSLALP
LPALSAAEKVAEAGEVVRVSKGKAIPIWRQIASVCLVRFCLCPALCLSII
LRSMSTGFIKLDRLMVFVLFLQSCMPR*
back to top
Synonyms
Publications