NO16G02250, NO16G02250 (gene) Nannochloropsis oceanica

Overview
NameNO16G02250
Unique NameNO16G02250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1867
Alignment locationchr16:653942..655808 +

Link to JBrowse

Properties
Property NameValue
DescriptionDihydrodipicolinate synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:653942..655808 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR002220DapA-like
Homology
BLAST of NO16G02250 vs. NCBI_GenBank
Match: EWM23922.1 (dihydrodipicolinate synthase [Nannochloropsis gaditana])

HSP 1 Score: 521.2 bits (1341), Expect = 2.500e-144
Identity = 268/344 (77.91%), Postives = 298/344 (86.63%), Query Frame = 0
Query:    1 MIRQVLVLALVAAYATTCSMGFVVPSLPVTAVTTSRRNMVVMKVE--GARMPIKRGSMVALVTPMKPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEASTLSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADASLVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAEVAAKNPSVIGIKEATGDVSRVAAIRKVAGNKFLLYSGDDETGAEFVLKGGDGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNPIPAKWALYRMGKIGAGIRPPMTVMEEEFHKPLEEALKAAGAI 343
            M R  LVLAL  A A T S  FV PSL   AV +SRR  + M      +RMPI++GSMVALVTPMKPDGAVDE QLR+LLQWHVACQTDG+VVLGTTGEASTLSF+ERARVLDITAEE+KGKIPIVVGTGTIDPR VVKLTQQA +HGADASLVVTPYYVKPTQKGL+SHFG+VAEAVDLPCLLYNVPGRTGSDIKPETAAEVA+K+  VIG+KEATGD++RVAAIR +AG  FLLYSGDDETGAEFVL+GGDGVISVTSN+VP+ MH LMMAAL KD    + +N PL+LLHQRLFLQ+NPIP KWALYRMG++G  IRPP+TV+EEEFH PLEEAL+AAG I
Sbjct:    1 MSRISLVLALTMALAATSSFAFVGPSLHAPAVRSSRRVRMTMNAVDISSRMPIEKGSMVALVTPMKPDGAVDEAQLRSLLQWHVACQTDGIVVLGTTGEASTLSFDERARVLDITAEEVKGKIPIVVGTGTIDPRMVVKLTQQARDHGADASLVVTPYYVKPTQKGLISHFGFVAEAVDLPCLLYNVPGRTGSDIKPETAAEVASKHAGVIGMKEATGDLARVAAIRSLAGQDFLLYSGDDETGAEFVLQGGDGVISVTSNIVPEQMHMLMMAALDKDKTRAKAINTPLKLLHQRLFLQANPIPVKWALYRMGRMGQAIRPPLTVLEEEFHAPLEEALRAAGVI 344          
BLAST of NO16G02250 vs. NCBI_GenBank
Match: EJK49756.1 (hypothetical protein THAOC_31333 [Thalassiosira oceanica])

HSP 1 Score: 310.5 bits (794), Expect = 6.700e-81
Identity = 163/302 (53.97%), Postives = 213/302 (70.53%), Query Frame = 0
Query:   48 RMPIKRGSMVALVTPMKPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEASTLSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADASLVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAEVAAKNPSVIGIKEATGDVSRVAAIRK------VAGNKFLLYSGDDETGAEFVLKGGDGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNPIPAKWALYRMGKIG-AGIRPPMTVMEEEFHKPLEEALKAAGAI 343
            R PI +GS VAL+TPM P GAV+  +LR LL+ H+   TDG+ +LGTTGEAS L+  ER +VLD+  EE+KGKIPI+VGTGTIDP  V + TQQA++ G DASLVVTPYYVKP Q+ L  HF  +A+ + LP  +YNVPGRTG D  P++ A+V A +P+++ +KEATGDVSRV+ I        VA +  LL+SGDD T  +FVL GGDG ISVT+N+ P  MH LMM+AL KD    +++N PL  LH  +F ++NPIP KWAL RMGKI  A +RPP+  +  + +  +E A+K AG +
Sbjct:   52 RTPIGQGSYVALITPMTPTGAVNLAELRVLLRLHLEAGTDGLCILGTTGEASVLTMAERKQVLDVAVEEVKGKIPILVGTGTIDPEHVKEQTQQAIDCGCDASLVVTPYYVKPPQRALTRHFETIAD-LGLPVCIYNVPGRTGVDFLPDSIAQV-ADHPNIVAVKEATGDVSRVSQIHDALAANGVARDTLLLFSGDDGTTDDFVLSGGDGCISVTANIAPARMHNLMMSALQKDKEEVDRINAPLRNLHSTIFCEANPIPIKWALQRMGKIDCAYLRPPLDELSPDCYGAVEIAMKEAGLL 351          
BLAST of NO16G02250 vs. NCBI_GenBank
Match: PCH61675.1 (4-hydroxy-tetrahydrodipicolinate synthase [Gammaproteobacteria bacterium])

HSP 1 Score: 309.3 bits (791), Expect = 1.500e-80
Identity = 154/288 (53.47%), Postives = 207/288 (71.88%), Query Frame = 0
Query:   53 RGSMVALVTPMKPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEASTLSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADASLVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAEVAAKNPSVIGIKEATGDVSRVAAIRKVAGNKFLLYSGDDETGAEFVLKGGDGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNPIPAKWALYRMGKIGAGIRPPMTVMEEEFHKPLEEALKAAG 341
            +GSMVALVTPM  DGAVD   L+ L++WHV   TD +V +GTTGE++TL  +E   V+    + + G+IP++ GTG    R  ++L++ A   GADA L+VTPYY KPTQ+GL  H   +AE+V +P +LYNVP RT  D+ PET A +AA   +++G+KEATGD+SR+  IR + G  F +YSGDDETG  F+ +GGDGVISVT+N+VPD+M  +  AALA DAA   ++N+ L+ LH+ LF++SNPIP KWAL+RMGKI AGIR PMT ++ +FH  +E ALK AG
Sbjct:    3 QGSMVALVTPMADDGAVDYSGLQALVEWHVQAGTDAIVAVGTTGESATLDEQEHCDVIRQVVQYVDGRIPVIAGTGANSTREAIELSRAAKEVGADACLLVTPYYNKPTQEGLYQHHKRIAESVAIPQILYNVPSRTACDMLPETIARLAAIE-NIVGVKEATGDLSRLDQIRALTGASFGIYSGDDETGMAFMSRGGDGVISVTNNIVPDIMAAMCKAALAGDAAEAGKINQDLKALHKDLFVESNPIPVKWALHRMGKIPAGIRLPMTPLDRKFHGVIENALKQAG 289          
BLAST of NO16G02250 vs. NCBI_GenBank
Match: WP_078486738.1 (4-hydroxy-tetrahydrodipicolinate synthase [Solemya elarraichensis gill symbiont] >OOZ36692.1 4-hydroxy-tetrahydrodipicolinate synthase [Solemya elarraichensis gill symbiont])

HSP 1 Score: 306.6 bits (784), Expect = 9.700e-80
Identity = 153/287 (53.31%), Postives = 201/287 (70.03%), Query Frame = 0
Query:   53 RGSMVALVTPMKPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEASTLSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADASLVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAEVAAKNPSVIGIKEATGDVSRVAAIRKVAGNKFLLYSGDDETGAEFVLKGGDGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNPIPAKWALYRMGKIGAGIRPPMTVMEEEFHKPLEEALKAA 340
            RGSMVALVTPM+ +G+VDE  LR L+ WH+   TD +V +GTTGE++TL  EE  +V+    E   G+IP++ GTG       ++LTQ A N GADA L+VTPYY KPTQ+GL  H+  VAEAVD+P +LYNVPGRT  D+ PET   +  K P+++GIKEATGD+ RV AIR++ G  F LYSGDD TG EFVL GGDGVISVT+NV P VMH ++ A++  ++    QL++ L  LH  LFL++NPIP KW L  MG+I  GIR P+T   +E+H+ + +A+  A
Sbjct:    3 RGSMVALVTPMRENGSVDEESLRALVGWHIDQGTDAIVAVGTTGESATLGEEEHCKVIRQVVEFTAGRIPVIAGTGANSTTEAIRLTQCAKNAGADACLLVTPYYNKPTQEGLYLHYKAVAEAVDIPQILYNVPGRTACDMLPETVGRL-TKVPNIVGIKEATGDLERVGAIRELCGEDFELYSGDDATGREFVLLGGDGVISVTANVAPRVMHDMITASMDGNSERAAQLDEKLAALHHDLFLEANPIPVKWVLAEMGRIPVGIRLPLTWFAQEYHEKMRQAMAQA 288          
BLAST of NO16G02250 vs. NCBI_GenBank
Match: XP_009041431.1 (hypothetical protein AURANDRAFT_33383 [Aureococcus anophagefferens] >EGB03879.1 hypothetical protein AURANDRAFT_33383 [Aureococcus anophagefferens])

HSP 1 Score: 305.8 bits (782), Expect = 1.600e-79
Identity = 159/287 (55.40%), Postives = 207/287 (72.13%), Query Frame = 0
Query:   54 GSMVALVTPM-KPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEASTLSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADASLVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAEVAAKNPSVIGIKEATGDVSRVAAIRKVAGNKFLLYSGDDETGAEFVLKGGDGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNPIPAKWALYRMGKIGAGIRPPMTVMEEEFHKPLEEALKAA 340
            GS VALVTPM     AVD G LR+LL+WHV C T GVV LGTTGEASTLS EER  VL    +   G +P+V GTGTID    + + ++A   GAD +LVVTPYYVKP Q  LV+HF  +A+AVDLP +LYNVPGRTG D+ P T AE+ A++  ++GIKEATGD +RVA +R+  G+ FLLYSG+D  G EFV  GGDGVISVT+NV P  M Q M+A   K +++  +++  L  LH++LF+Q+NPIP KWAL+R G++GAGIR P+  +E +FH+ +++AL+ A
Sbjct:   20 GSNVALVTPMVAGSNAVDYGALRSLLEWHVECGTAGVVALGTTGEASTLSGEERDEVLRTAVDVCGGVVPVVAGTGTIDTERAIAMGRRAAELGADGTLVVTPYYVKPPQAALVAHFNAIADAVDLPMILYNVPGRTGVDLLPATVAEL-ARHDRIVGIKEATGDNARVAVLREQCGDDFLLYSGEDAMGREFVALGGDGVISVTANVAPRDM-QTMLANPNKSSSI--KIDAKLRALHEKLFVQANPIPVKWALHRAGRMGAGIRSPLAALEPQFHEDIDDALRLA 302          
BLAST of NO16G02250 vs. NCBI_GenBank
Match: PCH65245.1 (4-hydroxy-tetrahydrodipicolinate synthase [Gammaproteobacteria bacterium])

HSP 1 Score: 304.3 bits (778), Expect = 4.800e-79
Identity = 148/289 (51.21%), Postives = 205/289 (70.93%), Query Frame = 0
Query:   54 GSMVALVTPMKPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEASTLSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADASLVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAEVAAKNPSVIGIKEATGDVSRVAAIRKVAGNKFLLYSGDDETGAEFVLKGGDGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNPIPAKWALYRMGKIGAGIRPPMTVMEEEFHKPLEEALKAAGAI 343
            GSMVALVTPM+ DG++D   L+ L+++H++  TD +V +GTTGE++TL+ EE   V+ +  E++ G+IP++ GTG       ++LTQ A + G DA L+VTPYY KPTQ+GL  H+  +AEAVD+P +LYNVPGRT  D+ PET A +A  + ++IGIKEATGD+SR   IR + G+K  LY+G+D    EF+L GG G ISVT+NV P  +H + +AALA D     Q+NK L LLH+ LFL++NPIP KWAL +M  I  GIR PMTV+ E++H+P+ +AL  AG +
Sbjct:    4 GSMVALVTPMRADGSLDSDCLKKLVEFHISEGTDAIVAVGTTGESATLTVEEHCEVIRLVVEQVNGRIPVIAGTGANSTSEAIELTQHAKDLGVDAVLLVTPYYNKPTQEGLYLHYKAIAEAVDIPQILYNVPGRTACDMLPETVARLADIS-NIIGIKEATGDLSRAEQIRTLCGDKIELYTGEDANTVEFILAGGVGTISVTANVAPAALHNMCVAALAGDGEKAHQINKDLVLLHENLFLEANPIPVKWALTQMDLIPQGIRLPMTVLSEQYHQPVRDALMTAGVL 291          
BLAST of NO16G02250 vs. NCBI_GenBank
Match: PHS23779.1 (4-hydroxy-tetrahydrodipicolinate synthase [Methylophaga sp.])

HSP 1 Score: 303.1 bits (775), Expect = 1.100e-78
Identity = 151/287 (52.61%), Postives = 199/287 (69.34%), Query Frame = 0
Query:   54 GSMVALVTPMKPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEASTLSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADASLVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAEVAAKNPSVIGIKEATGDVSRVAAIRKVAGNKFLLYSGDDETGAEFVLKGGDGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNPIPAKWALYRMGKIGAGIRPPMTVMEEEFHKPLEEALKAAG 341
            GSMVALVTPM+ DG++D   L  L+++H+   TD +V +GTTGE++TL+ EE   V+    +++ G+I ++ GTG       ++LTQ A + GA+A+L+VTPYY KPTQ+GL  H+  +AEAVD+P +LYNVP RT  D+ PET A + A  P++IGIKEATGDVSRV  I+ + G+K  LY+G+D     F+L GG GVISVT+NV P  MH +  AAL  D     Q+N  L LLHQRLFL+SNPIP KWAL  M  I  GIR PMTV+ E +H+P+ EAL AAG
Sbjct:    4 GSMVALVTPMRADGSLDADCLNKLIEFHINAGTDAIVAMGTTGESATLNVEEHCNVIRQVVQQVAGRIAVIAGTGANSTSEAIELTQSAKDLGANAALLVTPYYNKPTQEGLYQHYKAIAEAVDIPQILYNVPSRTACDLLPETVARL-ADIPNIIGIKEATGDVSRVKQIKALCGDKMELYTGEDANTVAFILAGGQGVISVTANVAPAKMHDMCAAALTGDMQTAHQINNDLSLLHQRLFLESNPIPVKWALTEMNLIPNGIRLPMTVLSENYHQPVREALYAAG 289          
BLAST of NO16G02250 vs. NCBI_GenBank
Match: XP_002286388.1 (dihydrodipicolinate synthase [Thalassiosira pseudonana CCMP1335] >EED96029.1 dihydrodipicolinate synthase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 302.8 bits (774), Expect = 1.400e-78
Identity = 151/295 (51.19%), Postives = 218/295 (73.90%), Query Frame = 0
Query:   49 MPIKRGSMVALVTPMKPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEASTLSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADASLVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAEVAAKNPSVIGIKEATGDVSRVAAIRK--VAGNKFLLYSGDDETGAEFVLKGGDGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNPIPAKWALYRMGKIGAG-IRPPMTVMEEEFHKPLEEALKAAG 341
            MP+K+GS  A++TPM  +G +D   LR LL++H+A +TD + +LGTTGEAS L+ EERA+VL    EE+KGKIPI+ GTGTI P  V ++T QA+  G DASLVVTPYYVKP Q+GL+ HF  +A+ + LP ++YN+PGR+  D+  E+   + A++P++IG+K+ATGD+ RV  IR+   A +  LLYSG+D T +EFV++GGDG ISVT+NV P  +H LMMA+LA +A L + +NKP+  LH++LF++SNPIP K+A +RMG I     RPP++ ++ +++  +E A++AAG
Sbjct:    1 MPMKQGSSCAIITPMTNEGKLDIPSLRKLLKFHLASETDNLCILGTTGEASVLNMEERAQVLTTAVEEVKGKIPILAGTGTIKPEAVREMTLQAIELGCDASLVVTPYYVKPPQRGLIKHFTDMAD-IGLPVVMYNIPGRSQVDLSVESTV-ICAQHPNIIGLKDATGDLDRVQQIRQSLAAEDDLLLYSGEDGTSSEFVMRGGDGCISVTANVAPKAIHDLMMASLAGNAELAKNINKPMLDLHKKLFVESNPIPVKYAAWRMGLISTPYCRPPLSNLDAKYYNDVETAMEAAG 293          
BLAST of NO16G02250 vs. NCBI_GenBank
Match: OUR88990.1 (4-hydroxy-tetrahydrodipicolinate synthase [Methylophaga sp. 42_8_T64])

HSP 1 Score: 302.8 bits (774), Expect = 1.400e-78
Identity = 147/289 (50.87%), Postives = 205/289 (70.93%), Query Frame = 0
Query:   54 GSMVALVTPMKPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEASTLSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADASLVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAEVAAKNPSVIGIKEATGDVSRVAAIRKVAGNKFLLYSGDDETGAEFVLKGGDGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNPIPAKWALYRMGKIGAGIRPPMTVMEEEFHKPLEEALKAAGAI 343
            GSMVALVTPM+ DG++D   L+ L+++H++  TD +V +GTTGE++TL+ EE   V+ +  E++ G+IP++ GTG       ++LTQ A + G DA+L+VTPYY KPTQ+GL  H   +AEAVD+P +LYNVPGRT  D+ PET A +A  + ++IGIKEATGD+SR   I+ + G+K  LY+G+D    EF+L GG G ISVT+NV P  +H + +AALA D     Q+NK L LLH+ LFL++NPIP KWAL +M  I  GIR PMTV+ E++H+P+ +AL  AG +
Sbjct:    4 GSMVALVTPMRADGSLDSDCLKKLVEFHISEGTDAIVAVGTTGESATLTVEEHCEVIRLVVEQVNGRIPVIAGTGANSTSEAIELTQHAKDLGVDAALLVTPYYNKPTQEGLYLHHKAIAEAVDIPQILYNVPGRTACDMLPETVARLADIS-NIIGIKEATGDLSRAEQIKTLCGDKIELYTGEDANTVEFILAGGVGTISVTANVAPAALHNMCVAALAGDGEKAHQINKDLVLLHENLFLEANPIPVKWALTQMDLIPQGIRLPMTVLSEQYHQPVRDALMTAGVL 291          
BLAST of NO16G02250 vs. NCBI_GenBank
Match: PCH87154.1 (4-hydroxy-tetrahydrodipicolinate synthase [Gammaproteobacteria bacterium] >PCH89864.1 4-hydroxy-tetrahydrodipicolinate synthase [Gammaproteobacteria bacterium])

HSP 1 Score: 302.4 bits (773), Expect = 1.800e-78
Identity = 150/288 (52.08%), Postives = 205/288 (71.18%), Query Frame = 0
Query:   53 RGSMVALVTPMKPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEASTLSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADASLVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAEVAAKNPSVIGIKEATGDVSRVAAIRKVAGNKFLLYSGDDETGAEFVLKGGDGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNPIPAKWALYRMGKIGAGIRPPMTVMEEEFHKPLEEALKAAG 341
            +GSMVALVTPM  DGAVD   L+ L++WHV   TD +V +GTTGE++TL   E   V+    + + G+IP++ GTG    R  + L++ A   GADA L+VTPYY KPTQ+GL  H+  +AE+V +P +LYNVPGRT  D+ PET   + AK  +++G+KEATGD+SR++ IR + G+ F++ SGDDETG  F+L+GG+GVISVT+NV P  M  +  AAL+ + A  E++N+ L  LH+ LF++SNPIP KWAL RMGKI AGIR PMT ++++FH  +E ALK AG
Sbjct:    3 QGSMVALVTPMAEDGAVDYSSLQALVEWHVQSGTDAIVAVGTTGESATLDETEHCDVIRHVVQYVDGRIPVIAGTGANSTREAINLSRCAQQVGADACLLVTPYYNKPTQEGLYQHYKLIAESVAIPQILYNVPGRTACDMLPETIGRL-AKIDNIVGVKEATGDLSRLSQIRALTGDDFVIVSGDDETGTAFILQGGNGVISVTNNVAPAAMAAMCKAALSGNVAEAERINQDLLGLHKELFVESNPIPVKWALQRMGKIPAGIRLPMTPLDDKFHAAVEAALKQAG 289          
The following BLAST results are available for this feature:
BLAST of NO16G02250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23922.12.500e-14477.91dihydrodipicolinate synthase [Nannochloropsis gadi... [more]
EJK49756.16.700e-8153.97hypothetical protein THAOC_31333 [Thalassiosira oc... [more]
PCH61675.11.500e-8053.474-hydroxy-tetrahydrodipicolinate synthase [Gammapr... [more]
WP_078486738.19.700e-8053.314-hydroxy-tetrahydrodipicolinate synthase [Solemya... [more]
XP_009041431.11.600e-7955.40hypothetical protein AURANDRAFT_33383 [Aureococcus... [more]
PCH65245.14.800e-7951.214-hydroxy-tetrahydrodipicolinate synthase [Gammapr... [more]
PHS23779.11.100e-7852.614-hydroxy-tetrahydrodipicolinate synthase [Methylo... [more]
XP_002286388.11.400e-7851.19dihydrodipicolinate synthase [Thalassiosira pseudo... [more]
OUR88990.11.400e-7850.874-hydroxy-tetrahydrodipicolinate synthase [Methylo... [more]
PCH87154.11.800e-7852.084-hydroxy-tetrahydrodipicolinate synthase [Gammapr... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR035ngnoR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G02250.1NO16G02250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593809gene_6119Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100082g5gene6544Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G02250.1NO16G02250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G02250 ID=NO16G02250|Name=NO16G02250|organism=Nannochloropsis oceanica|type=gene|length=1867bp
CGGAGCTTTCTTGAAAATACCGCAAAGCACCTTAATTAAGCCAGGCATAA
ATCGCTTTGCAGAAGAACGGAGTGGAAATAAGGCGCCCTTGACACTACCT
CAATCTCCCGCTGGAAAGGTCCACGGTCGTGCGTTGCTTGACAGGGAACG
CGGCAGGCCCATGCATCATCAACCCCTCTTGCCTCATCCACCACCACTAC
TTACTTCATCAGTCGTTCAGGCTTTCCGCCTTACAAGTCACCGCTGAAAA
CCCCATAACCACCATACCTCAAGGACAGGGAAGCCATCTGCTATACCTTA
CAAGCCAGTATGATTCGCCAAGTGCTAGgtatgtgcatctttcactctcc
ttgtctgctttctgcctccagcaaacaagggaacaaatgatggcggtccg
cgctgcaacacatgcaccgctactacaagcagctaaaaaatcacactccc
atcagatcagactctgaaaaactcgggcgtaggtgcagccttttggtctc
tccccacttctgggcttgttgcaaatttttagcctcatcgatattcgata
ctaccctcgaacctctaatcgccctcccccaagtcacgactctgccccta
ccccacccctacactcaacagTCCTGGCCCTGGTGGCGGCCTACGCCACG
ACATGTAGCATGGGTTTCGTGGTCCCCTCCCTCCCTGTCACAGCTGTCAC
GACCTCCCGCCGCAACATGGTGGTGATGAAAGTTGAAGGCGCCCGCATGC
CTATCAAGAGAGGCAGCATGGTGGCGCTCGTAACGCCGATGAAGCCGGAC
GGGGCCGTGGACGAGGGGCAGCTTCGGACTCTCTTACAATGGCACGTGGC
TTGTCAGACGGACGGTGTGGTTGTGCTGGGCACGACTGGAGAGGCTTCCA
CCTTGTCTTTCGAGGAGCGAGCGCGAGTGTTGGACATAACTGCCGAGGAG
ATTAAGGGCAAGATTCCGATTGTGGTTGGCACGGGCACCATTGACCCCCG
CACTGTCGTGAAGCTGACACAGCAGGCAGTGAATCATGGAGCCGATGCCA
GCTTGGTTGTGACGCCTTACTATGTCAAACCGACGCAAAAAGGGCTAGTA
TCTCACTTCGGCTATGTCGCCGAAGCGGTCGACTTGCCCTGCCTCCTGTA
CAACGTCCCAGGCCGGACGGGCTCGGACATCAAGCCTGAAACCGCGGCAG
AGGTGGCAGCGAAGAACCCGAGCGTGATCGGAATCAAGGAAGCCACGGGA
GATGTGTCGCGTGTGGCGGCCATTCGGAAGGTGGCGGGGAACAAGTTTTT
GCTTTACAGTGGTGATGATGAAACAGGGGCCGAATTTGTGCTGAAAGGAG
GTGATGGTGTCATCTCTGTGACCTCTAATGTTGTCCCCGATGTGATGCAC
CAACTGATGATGGCGGCCCTCGCCAAAGACGCGGCGCTGACTGAGCAGTT
GAACAAGCCTCTTGAGCTGCTGCACCAACGCTTATTCCTCCAATCAAACC
CCATCCCGGCCAAATGGGCTCTGTATCGCATGGGTAAGATTGGTGCGGGG
ATTCGCCCACCTATGACGGTGATGGAAGAGGAGTTTCATAAACCCTTGGA
AGAGGCATTAAAGGCGGCGGGAGCTATCTAAGTATAGAGGAGGAGGCAGG
GAGGGTGGAAGAGGAGGTGTCAGGGAGAGGGATGAGAGAGAGTGGGAGAA
GAGGAGGTAATACAAAAGCGAGCCGCCAAGTTTAGAAATCAAGCAATCAA
CGATGCAAATGAAACGGAAACAGGAGCGTCACTTTCCTGCTTGCGGATGG
ATGAACTCAGAGCCTGCCTCCCCTTAGCGTCGCGACACATTTCGGGATGA
TTCCGATCCGCCGATTT
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protein sequence of NO16G02250.1

>NO16G02250.1-protein ID=NO16G02250.1-protein|Name=NO16G02250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=343bp
MIRQVLVLALVAAYATTCSMGFVVPSLPVTAVTTSRRNMVVMKVEGARMP
IKRGSMVALVTPMKPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEAST
LSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADAS
LVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAE
VAAKNPSVIGIKEATGDVSRVAAIRKVAGNKFLLYSGDDETGAEFVLKGG
DGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNP
IPAKWALYRMGKIGAGIRPPMTVMEEEFHKPLEEALKAAGAI*
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Synonyms
Publications