NO16G02250, NO16G02250 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G02250 vs. NCBI_GenBank
Match: EWM23922.1 (dihydrodipicolinate synthase [Nannochloropsis gaditana]) HSP 1 Score: 521.2 bits (1341), Expect = 2.500e-144 Identity = 268/344 (77.91%), Postives = 298/344 (86.63%), Query Frame = 0
Query: 1 MIRQVLVLALVAAYATTCSMGFVVPSLPVTAVTTSRRNMVVMKVE--GARMPIKRGSMVALVTPMKPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEASTLSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADASLVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAEVAAKNPSVIGIKEATGDVSRVAAIRKVAGNKFLLYSGDDETGAEFVLKGGDGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNPIPAKWALYRMGKIGAGIRPPMTVMEEEFHKPLEEALKAAGAI 343
M R LVLAL A A T S FV PSL AV +SRR + M +RMPI++GSMVALVTPMKPDGAVDE QLR+LLQWHVACQTDG+VVLGTTGEASTLSF+ERARVLDITAEE+KGKIPIVVGTGTIDPR VVKLTQQA +HGADASLVVTPYYVKPTQKGL+SHFG+VAEAVDLPCLLYNVPGRTGSDIKPETAAEVA+K+ VIG+KEATGD++RVAAIR +AG FLLYSGDDETGAEFVL+GGDGVISVTSN+VP+ MH LMMAAL KD + +N PL+LLHQRLFLQ+NPIP KWALYRMG++G IRPP+TV+EEEFH PLEEAL+AAG I
Sbjct: 1 MSRISLVLALTMALAATSSFAFVGPSLHAPAVRSSRRVRMTMNAVDISSRMPIEKGSMVALVTPMKPDGAVDEAQLRSLLQWHVACQTDGIVVLGTTGEASTLSFDERARVLDITAEEVKGKIPIVVGTGTIDPRMVVKLTQQARDHGADASLVVTPYYVKPTQKGLISHFGFVAEAVDLPCLLYNVPGRTGSDIKPETAAEVASKHAGVIGMKEATGDLARVAAIRSLAGQDFLLYSGDDETGAEFVLQGGDGVISVTSNIVPEQMHMLMMAALDKDKTRAKAINTPLKLLHQRLFLQANPIPVKWALYRMGRMGQAIRPPLTVLEEEFHAPLEEALRAAGVI 344
BLAST of NO16G02250 vs. NCBI_GenBank
Match: EJK49756.1 (hypothetical protein THAOC_31333 [Thalassiosira oceanica]) HSP 1 Score: 310.5 bits (794), Expect = 6.700e-81 Identity = 163/302 (53.97%), Postives = 213/302 (70.53%), Query Frame = 0
Query: 48 RMPIKRGSMVALVTPMKPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEASTLSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADASLVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAEVAAKNPSVIGIKEATGDVSRVAAIRK------VAGNKFLLYSGDDETGAEFVLKGGDGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNPIPAKWALYRMGKIG-AGIRPPMTVMEEEFHKPLEEALKAAGAI 343
R PI +GS VAL+TPM P GAV+ +LR LL+ H+ TDG+ +LGTTGEAS L+ ER +VLD+ EE+KGKIPI+VGTGTIDP V + TQQA++ G DASLVVTPYYVKP Q+ L HF +A+ + LP +YNVPGRTG D P++ A+V A +P+++ +KEATGDVSRV+ I VA + LL+SGDD T +FVL GGDG ISVT+N+ P MH LMM+AL KD +++N PL LH +F ++NPIP KWAL RMGKI A +RPP+ + + + +E A+K AG +
Sbjct: 52 RTPIGQGSYVALITPMTPTGAVNLAELRVLLRLHLEAGTDGLCILGTTGEASVLTMAERKQVLDVAVEEVKGKIPILVGTGTIDPEHVKEQTQQAIDCGCDASLVVTPYYVKPPQRALTRHFETIAD-LGLPVCIYNVPGRTGVDFLPDSIAQV-ADHPNIVAVKEATGDVSRVSQIHDALAANGVARDTLLLFSGDDGTTDDFVLSGGDGCISVTANIAPARMHNLMMSALQKDKEEVDRINAPLRNLHSTIFCEANPIPIKWALQRMGKIDCAYLRPPLDELSPDCYGAVEIAMKEAGLL 351
BLAST of NO16G02250 vs. NCBI_GenBank
Match: PCH61675.1 (4-hydroxy-tetrahydrodipicolinate synthase [Gammaproteobacteria bacterium]) HSP 1 Score: 309.3 bits (791), Expect = 1.500e-80 Identity = 154/288 (53.47%), Postives = 207/288 (71.88%), Query Frame = 0
Query: 53 RGSMVALVTPMKPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEASTLSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADASLVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAEVAAKNPSVIGIKEATGDVSRVAAIRKVAGNKFLLYSGDDETGAEFVLKGGDGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNPIPAKWALYRMGKIGAGIRPPMTVMEEEFHKPLEEALKAAG 341
+GSMVALVTPM DGAVD L+ L++WHV TD +V +GTTGE++TL +E V+ + + G+IP++ GTG R ++L++ A GADA L+VTPYY KPTQ+GL H +AE+V +P +LYNVP RT D+ PET A +AA +++G+KEATGD+SR+ IR + G F +YSGDDETG F+ +GGDGVISVT+N+VPD+M + AALA DAA ++N+ L+ LH+ LF++SNPIP KWAL+RMGKI AGIR PMT ++ +FH +E ALK AG
Sbjct: 3 QGSMVALVTPMADDGAVDYSGLQALVEWHVQAGTDAIVAVGTTGESATLDEQEHCDVIRQVVQYVDGRIPVIAGTGANSTREAIELSRAAKEVGADACLLVTPYYNKPTQEGLYQHHKRIAESVAIPQILYNVPSRTACDMLPETIARLAAIE-NIVGVKEATGDLSRLDQIRALTGASFGIYSGDDETGMAFMSRGGDGVISVTNNIVPDIMAAMCKAALAGDAAEAGKINQDLKALHKDLFVESNPIPVKWALHRMGKIPAGIRLPMTPLDRKFHGVIENALKQAG 289
BLAST of NO16G02250 vs. NCBI_GenBank
Match: WP_078486738.1 (4-hydroxy-tetrahydrodipicolinate synthase [Solemya elarraichensis gill symbiont] >OOZ36692.1 4-hydroxy-tetrahydrodipicolinate synthase [Solemya elarraichensis gill symbiont]) HSP 1 Score: 306.6 bits (784), Expect = 9.700e-80 Identity = 153/287 (53.31%), Postives = 201/287 (70.03%), Query Frame = 0
Query: 53 RGSMVALVTPMKPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEASTLSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADASLVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAEVAAKNPSVIGIKEATGDVSRVAAIRKVAGNKFLLYSGDDETGAEFVLKGGDGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNPIPAKWALYRMGKIGAGIRPPMTVMEEEFHKPLEEALKAA 340
RGSMVALVTPM+ +G+VDE LR L+ WH+ TD +V +GTTGE++TL EE +V+ E G+IP++ GTG ++LTQ A N GADA L+VTPYY KPTQ+GL H+ VAEAVD+P +LYNVPGRT D+ PET + K P+++GIKEATGD+ RV AIR++ G F LYSGDD TG EFVL GGDGVISVT+NV P VMH ++ A++ ++ QL++ L LH LFL++NPIP KW L MG+I GIR P+T +E+H+ + +A+ A
Sbjct: 3 RGSMVALVTPMRENGSVDEESLRALVGWHIDQGTDAIVAVGTTGESATLGEEEHCKVIRQVVEFTAGRIPVIAGTGANSTTEAIRLTQCAKNAGADACLLVTPYYNKPTQEGLYLHYKAVAEAVDIPQILYNVPGRTACDMLPETVGRL-TKVPNIVGIKEATGDLERVGAIRELCGEDFELYSGDDATGREFVLLGGDGVISVTANVAPRVMHDMITASMDGNSERAAQLDEKLAALHHDLFLEANPIPVKWVLAEMGRIPVGIRLPLTWFAQEYHEKMRQAMAQA 288
BLAST of NO16G02250 vs. NCBI_GenBank
Match: XP_009041431.1 (hypothetical protein AURANDRAFT_33383 [Aureococcus anophagefferens] >EGB03879.1 hypothetical protein AURANDRAFT_33383 [Aureococcus anophagefferens]) HSP 1 Score: 305.8 bits (782), Expect = 1.600e-79 Identity = 159/287 (55.40%), Postives = 207/287 (72.13%), Query Frame = 0
Query: 54 GSMVALVTPM-KPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEASTLSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADASLVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAEVAAKNPSVIGIKEATGDVSRVAAIRKVAGNKFLLYSGDDETGAEFVLKGGDGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNPIPAKWALYRMGKIGAGIRPPMTVMEEEFHKPLEEALKAA 340
GS VALVTPM AVD G LR+LL+WHV C T GVV LGTTGEASTLS EER VL + G +P+V GTGTID + + ++A GAD +LVVTPYYVKP Q LV+HF +A+AVDLP +LYNVPGRTG D+ P T AE+ A++ ++GIKEATGD +RVA +R+ G+ FLLYSG+D G EFV GGDGVISVT+NV P M Q M+A K +++ +++ L LH++LF+Q+NPIP KWAL+R G++GAGIR P+ +E +FH+ +++AL+ A
Sbjct: 20 GSNVALVTPMVAGSNAVDYGALRSLLEWHVECGTAGVVALGTTGEASTLSGEERDEVLRTAVDVCGGVVPVVAGTGTIDTERAIAMGRRAAELGADGTLVVTPYYVKPPQAALVAHFNAIADAVDLPMILYNVPGRTGVDLLPATVAEL-ARHDRIVGIKEATGDNARVAVLREQCGDDFLLYSGEDAMGREFVALGGDGVISVTANVAPRDM-QTMLANPNKSSSI--KIDAKLRALHEKLFVQANPIPVKWALHRAGRMGAGIRSPLAALEPQFHEDIDDALRLA 302
BLAST of NO16G02250 vs. NCBI_GenBank
Match: PCH65245.1 (4-hydroxy-tetrahydrodipicolinate synthase [Gammaproteobacteria bacterium]) HSP 1 Score: 304.3 bits (778), Expect = 4.800e-79 Identity = 148/289 (51.21%), Postives = 205/289 (70.93%), Query Frame = 0
Query: 54 GSMVALVTPMKPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEASTLSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADASLVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAEVAAKNPSVIGIKEATGDVSRVAAIRKVAGNKFLLYSGDDETGAEFVLKGGDGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNPIPAKWALYRMGKIGAGIRPPMTVMEEEFHKPLEEALKAAGAI 343
GSMVALVTPM+ DG++D L+ L+++H++ TD +V +GTTGE++TL+ EE V+ + E++ G+IP++ GTG ++LTQ A + G DA L+VTPYY KPTQ+GL H+ +AEAVD+P +LYNVPGRT D+ PET A +A + ++IGIKEATGD+SR IR + G+K LY+G+D EF+L GG G ISVT+NV P +H + +AALA D Q+NK L LLH+ LFL++NPIP KWAL +M I GIR PMTV+ E++H+P+ +AL AG +
Sbjct: 4 GSMVALVTPMRADGSLDSDCLKKLVEFHISEGTDAIVAVGTTGESATLTVEEHCEVIRLVVEQVNGRIPVIAGTGANSTSEAIELTQHAKDLGVDAVLLVTPYYNKPTQEGLYLHYKAIAEAVDIPQILYNVPGRTACDMLPETVARLADIS-NIIGIKEATGDLSRAEQIRTLCGDKIELYTGEDANTVEFILAGGVGTISVTANVAPAALHNMCVAALAGDGEKAHQINKDLVLLHENLFLEANPIPVKWALTQMDLIPQGIRLPMTVLSEQYHQPVRDALMTAGVL 291
BLAST of NO16G02250 vs. NCBI_GenBank
Match: PHS23779.1 (4-hydroxy-tetrahydrodipicolinate synthase [Methylophaga sp.]) HSP 1 Score: 303.1 bits (775), Expect = 1.100e-78 Identity = 151/287 (52.61%), Postives = 199/287 (69.34%), Query Frame = 0
Query: 54 GSMVALVTPMKPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEASTLSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADASLVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAEVAAKNPSVIGIKEATGDVSRVAAIRKVAGNKFLLYSGDDETGAEFVLKGGDGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNPIPAKWALYRMGKIGAGIRPPMTVMEEEFHKPLEEALKAAG 341
GSMVALVTPM+ DG++D L L+++H+ TD +V +GTTGE++TL+ EE V+ +++ G+I ++ GTG ++LTQ A + GA+A+L+VTPYY KPTQ+GL H+ +AEAVD+P +LYNVP RT D+ PET A + A P++IGIKEATGDVSRV I+ + G+K LY+G+D F+L GG GVISVT+NV P MH + AAL D Q+N L LLHQRLFL+SNPIP KWAL M I GIR PMTV+ E +H+P+ EAL AAG
Sbjct: 4 GSMVALVTPMRADGSLDADCLNKLIEFHINAGTDAIVAMGTTGESATLNVEEHCNVIRQVVQQVAGRIAVIAGTGANSTSEAIELTQSAKDLGANAALLVTPYYNKPTQEGLYQHYKAIAEAVDIPQILYNVPSRTACDLLPETVARL-ADIPNIIGIKEATGDVSRVKQIKALCGDKMELYTGEDANTVAFILAGGQGVISVTANVAPAKMHDMCAAALTGDMQTAHQINNDLSLLHQRLFLESNPIPVKWALTEMNLIPNGIRLPMTVLSENYHQPVREALYAAG 289
BLAST of NO16G02250 vs. NCBI_GenBank
Match: XP_002286388.1 (dihydrodipicolinate synthase [Thalassiosira pseudonana CCMP1335] >EED96029.1 dihydrodipicolinate synthase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 302.8 bits (774), Expect = 1.400e-78 Identity = 151/295 (51.19%), Postives = 218/295 (73.90%), Query Frame = 0
Query: 49 MPIKRGSMVALVTPMKPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEASTLSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADASLVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAEVAAKNPSVIGIKEATGDVSRVAAIRK--VAGNKFLLYSGDDETGAEFVLKGGDGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNPIPAKWALYRMGKIGAG-IRPPMTVMEEEFHKPLEEALKAAG 341
MP+K+GS A++TPM +G +D LR LL++H+A +TD + +LGTTGEAS L+ EERA+VL EE+KGKIPI+ GTGTI P V ++T QA+ G DASLVVTPYYVKP Q+GL+ HF +A+ + LP ++YN+PGR+ D+ E+ + A++P++IG+K+ATGD+ RV IR+ A + LLYSG+D T +EFV++GGDG ISVT+NV P +H LMMA+LA +A L + +NKP+ LH++LF++SNPIP K+A +RMG I RPP++ ++ +++ +E A++AAG
Sbjct: 1 MPMKQGSSCAIITPMTNEGKLDIPSLRKLLKFHLASETDNLCILGTTGEASVLNMEERAQVLTTAVEEVKGKIPILAGTGTIKPEAVREMTLQAIELGCDASLVVTPYYVKPPQRGLIKHFTDMAD-IGLPVVMYNIPGRSQVDLSVESTV-ICAQHPNIIGLKDATGDLDRVQQIRQSLAAEDDLLLYSGEDGTSSEFVMRGGDGCISVTANVAPKAIHDLMMASLAGNAELAKNINKPMLDLHKKLFVESNPIPVKYAAWRMGLISTPYCRPPLSNLDAKYYNDVETAMEAAG 293
BLAST of NO16G02250 vs. NCBI_GenBank
Match: OUR88990.1 (4-hydroxy-tetrahydrodipicolinate synthase [Methylophaga sp. 42_8_T64]) HSP 1 Score: 302.8 bits (774), Expect = 1.400e-78 Identity = 147/289 (50.87%), Postives = 205/289 (70.93%), Query Frame = 0
Query: 54 GSMVALVTPMKPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEASTLSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADASLVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAEVAAKNPSVIGIKEATGDVSRVAAIRKVAGNKFLLYSGDDETGAEFVLKGGDGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNPIPAKWALYRMGKIGAGIRPPMTVMEEEFHKPLEEALKAAGAI 343
GSMVALVTPM+ DG++D L+ L+++H++ TD +V +GTTGE++TL+ EE V+ + E++ G+IP++ GTG ++LTQ A + G DA+L+VTPYY KPTQ+GL H +AEAVD+P +LYNVPGRT D+ PET A +A + ++IGIKEATGD+SR I+ + G+K LY+G+D EF+L GG G ISVT+NV P +H + +AALA D Q+NK L LLH+ LFL++NPIP KWAL +M I GIR PMTV+ E++H+P+ +AL AG +
Sbjct: 4 GSMVALVTPMRADGSLDSDCLKKLVEFHISEGTDAIVAVGTTGESATLTVEEHCEVIRLVVEQVNGRIPVIAGTGANSTSEAIELTQHAKDLGVDAALLVTPYYNKPTQEGLYLHHKAIAEAVDIPQILYNVPGRTACDMLPETVARLADIS-NIIGIKEATGDLSRAEQIKTLCGDKIELYTGEDANTVEFILAGGVGTISVTANVAPAALHNMCVAALAGDGEKAHQINKDLVLLHENLFLEANPIPVKWALTQMDLIPQGIRLPMTVLSEQYHQPVRDALMTAGVL 291
BLAST of NO16G02250 vs. NCBI_GenBank
Match: PCH87154.1 (4-hydroxy-tetrahydrodipicolinate synthase [Gammaproteobacteria bacterium] >PCH89864.1 4-hydroxy-tetrahydrodipicolinate synthase [Gammaproteobacteria bacterium]) HSP 1 Score: 302.4 bits (773), Expect = 1.800e-78 Identity = 150/288 (52.08%), Postives = 205/288 (71.18%), Query Frame = 0
Query: 53 RGSMVALVTPMKPDGAVDEGQLRTLLQWHVACQTDGVVVLGTTGEASTLSFEERARVLDITAEEIKGKIPIVVGTGTIDPRTVVKLTQQAVNHGADASLVVTPYYVKPTQKGLVSHFGYVAEAVDLPCLLYNVPGRTGSDIKPETAAEVAAKNPSVIGIKEATGDVSRVAAIRKVAGNKFLLYSGDDETGAEFVLKGGDGVISVTSNVVPDVMHQLMMAALAKDAALTEQLNKPLELLHQRLFLQSNPIPAKWALYRMGKIGAGIRPPMTVMEEEFHKPLEEALKAAG 341
+GSMVALVTPM DGAVD L+ L++WHV TD +V +GTTGE++TL E V+ + + G+IP++ GTG R + L++ A GADA L+VTPYY KPTQ+GL H+ +AE+V +P +LYNVPGRT D+ PET + AK +++G+KEATGD+SR++ IR + G+ F++ SGDDETG F+L+GG+GVISVT+NV P M + AAL+ + A E++N+ L LH+ LF++SNPIP KWAL RMGKI AGIR PMT ++++FH +E ALK AG
Sbjct: 3 QGSMVALVTPMAEDGAVDYSSLQALVEWHVQSGTDAIVAVGTTGESATLDETEHCDVIRHVVQYVDGRIPVIAGTGANSTREAINLSRCAQQVGADACLLVTPYYNKPTQEGLYQHYKLIAESVAIPQILYNVPGRTACDMLPETIGRL-AKIDNIVGVKEATGDLSRLSQIRALTGDDFVIVSGDDETGTAFILQGGNGVISVTNNVAPAAMAAMCKAALSGNVAEAERINQDLLGLHKELFVESNPIPVKWALQRMGKIPAGIRLPMTPLDDKFHAAVEAALKQAG 289 The following BLAST results are available for this feature:
BLAST of NO16G02250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G02250 ID=NO16G02250|Name=NO16G02250|organism=Nannochloropsis oceanica|type=gene|length=1867bpback to top protein sequence of NO16G02250.1 >NO16G02250.1-protein ID=NO16G02250.1-protein|Name=NO16G02250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=343bpback to top Synonyms
Publications
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