NO16G02160, NO16G02160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G02160 vs. NCBI_GenBank
Match: EWM23896.1 (choline monooxygenase [Nannochloropsis gaditana]) HSP 1 Score: 415.6 bits (1067), Expect = 1.500e-112 Identity = 201/306 (65.69%), Postives = 238/306 (77.78%), Query Frame = 0 Query: 15 SRCFRTPPSSPSSL----GRPLST------LLKDLPFLKQELARFDPTVPIESASTPPASWFTHPAFHALEMASVFAENPLCVGSTLHIPRPGDYFCGQVGTHPFIVLRDTVGKIKAFYNVCRHKGMRLVAGDKGQIDKTTFACPYHGWEYRLDGRLAKATRIRGIQNFSPKDYGLIEIPLHTWGPLIFLQFGRRVGKSRSSSSEGGVMEGEGRYSLAHLTPLRERLDAEFGFSTGLRHVARRMYRLKCNHKVVSDNFLDNAYHVPYAHPALGQALDLASYSATLHDRYSIQSCKGATPLSSLPPF 311 SR R SS SSL G ST L + +LK+ELARFDP VPIE ASTPPASWFT PAFH LEMAS+F++NPLCVGSTL IP PGDYFCGQVG+HPFIVLR+ G +KAFYNVCRHKGMRLVA D G++ +T CPYHGWEYRLDGRLAKATR+ GI++F+PKDYGL+EIPL TWGPL+FL+FG ++ + V+ +G + LA+L PL ERLDAE GFS+GLRHV RR YR++CNHKVVSDN+LDN YHVPYAH ALG ALDL+SY A++HDRYS+Q+C+GA P +S P F Sbjct: 41 SRTCRAGNSSSSSLPYSTGAKASTSPFERSLFQYKDYLKRELARFDPDVPIELASTPPASWFTDPAFHTLEMASIFSDNPLCVGSTLQIPLPGDYFCGQVGSHPFIVLREASGNVKAFYNVCRHKGMRLVAEDAGRVGQTVLTCPYHGWEYRLDGRLAKATRVAGIRDFAPKDYGLLEIPLWTWGPLVFLRFG------QAENEAPHVVGKDGSHPLAYLEPLLERLDAEHGFSSGLRHVRRRRYRVQCNHKVVSDNYLDNGYHVPYAHKALGNALDLSSYGASVHDRYSVQACRGA-PSTSSPSF 339
BLAST of NO16G02160 vs. NCBI_GenBank
Match: XP_002738379.1 (PREDICTED: choline monooxygenase, chloroplastic-like [Saccoglossus kowalevskii]) HSP 1 Score: 236.5 bits (602), Expect = 1.300e-58 Identity = 114/256 (44.53%), Postives = 160/256 (62.50%), Query Frame = 0 Query: 42 LKQELARFDPTVPIESASTPPASWFTHPAFHALEMASVFAENPLCVGSTLHIPRPGDYFCGQVGTHPFIVLRDTVGKIKAFYNVCRHKGMRLVAGDKGQIDKTTFACPYHGWEYRLDGRLAKATRIRGIQNFSPKDYGLIEIPLHTWGPLIFLQFGRRVGKSRSSSSEGGVMEGEGRYSLAHLTPLRERLDAEFGFSTGLRHVARRMYRLKCNHKVVSDNFLDNAYHVPYAHPALGQALDLASYSATLHDRYSIQS 298 L++E+A+FD +P+E+A+TPP++WFT P FH LE+ +VF + + G I +PG +F G +G P+IVLRD ++KAFYNVCRH M++V +G + CPYHGW Y L GRL KATR+RGI+NFS +++GLI + + WGPLIF++ ++ S + E L L+ RLD GFS+G++ + R Y L CN KV DN+LD YHV AH L ALD +SY +H+ +SIQS Sbjct: 31 LRREVAKFDANIPVEAATTPPSTWFTRPEFHQLEVHTVFHDAWMFAGRVDQITKPGKFFTGTIGKEPYIVLRDENNELKAFYNVCRHHAMQIVNDTEGTV--KDLQCPYHGWTYALSGRLKKATRLRGIKNFSARNFGLIPMMVKAWGPLIFIR------PNKISEEKDNFFE--------DLESLKNRLDG-IGFSSGMKFMKRITYTLNCNWKVFVDNYLDGGYHVSTAHKDLSVALDASSYRTAVHEWHSIQS 269
BLAST of NO16G02160 vs. NCBI_GenBank
Match: XP_004507911.1 (PREDICTED: choline monooxygenase, chloroplastic [Cicer arietinum]) HSP 1 Score: 234.2 bits (596), Expect = 6.400e-58 Identity = 124/302 (41.06%), Postives = 171/302 (56.62%), Query Frame = 0 Query: 1 MKPFFTALSRRLVSSRCFRTPPSSPSSLGRPLSTLLKDLPFLKQELARFDPTVPIESASTPPASWFTHPAFHALEMASVFAENPLCVGSTLHIPRPGDYFCGQVGTHPFIVLRDTVGKIKAFYNVCRHKGMRLVAGDKGQIDKTTFACPYHGWEYRLDGRLAKATRIRGIQNFSPKDYGLIEIPLHTWGPLIFLQFGRRVGKSRSSSSEGGVMEGEGRYSLAHLTPLRERLDAEFGFSTGLRHVARRMYRLKCNHKVVSDNFLDNAYHVPYAHPALGQALDLASYSATLHDRYSIQSCKGAT 303 M PF L + + F P+ SS+ S DL ++ + +F+P +P+E A TPP+SW+THP+F LE+ VF + VGST I PGD+F G++G F+V RD G + AFYNVCRH L +G GQ K+ F CPYHGW Y L+G L KATRI G+++F+ ++GLI I + TWGP + L + + S E G S L + G + L ++ RR Y ++CN KV DN+LD YHVPYAH L L+L SYS TL ++ SIQSC+G++ Sbjct: 7 MTPFIPNLRKGQTQNLNF---PNKHSSIRSCCSVGSSDLVVSQRLVQQFNPKIPVEEAVTPPSSWYTHPSFFHLELDRVFYKGWQAVGSTEQIKNPGDFFTGRLGDVEFVVCRDDSGNVHAFYNVCRHHASILASG-SGQ--KSCFVCPYHGWTYGLNGTLLKATRISGMRDFNVNEFGLIPIKVATWGPFVLLNLKKENLSEKEVDSHNVAKEWLGSCS---------ELLSTNGVDSSLSYLCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLNLDSYSITLFEKVSIQSCEGSS 293
BLAST of NO16G02160 vs. NCBI_GenBank
Match: KDP36056.1 (hypothetical protein JCGZ_10308 [Jatropha curcas]) HSP 1 Score: 233.4 bits (594), Expect = 1.100e-57 Identity = 129/308 (41.88%), Postives = 175/308 (56.82%), Query Frame = 0 Query: 1 MKPFFTALSRRLVSSRCFRTPPSSP-SSLGRPLSTLLKDLPFLKQELA-RFDPTVPIESASTPPASWFTHPAFHALEMASVFAENPLCVGSTLHIPRPGDYFCGQVGTHPFIVLRDTVGKIKAFYNVCRHKGMRLVAGDKGQIDKTTFACPYHGWEYRLDGRLAKATRIRGIQNFSPKDYGLIEIPLHTWGPLIFLQFGRRVGKSRSSSSEGGVMEGEGRYSLAHLTPLRERLDAEFGFSTGLRHVARRMYRLKCNHKVVSDNFLDNAYHVPYAHPALGQALDLASYSATLHDRYSIQSCKGATPLSS 307 M + +S R +SSR + +P + RP T+ L Q+L FDP +PIE ASTPP+SW+T P+F E+ VF VG T I P D+F G++G F+V R+ GK+ AF+NVCRH G L +G GQ K+ F CPYH W Y LDG L KATRI G+QNF+ ++GLI I + TWGP I L + EG ++E E S + + G + L HV RR+Y ++CN KV DN+LD YHVPYAH AL L L SYS +++++ SIQ C+G++ S+ Sbjct: 1 MTTAISMISLRPISSRVHQIQQHNPIIAQHRPSLTVSFSLQTHCQKLVDEFDPHIPIEKASTPPSSWYTDPSFFDYELHRVFYRGWQAVGYTEQIKDPRDFFTGRLGNVEFLVCRNDDGKVHAFHNVCRHHGSLLASG-SGQ--KSCFVCPYHAWTYGLDGALLKATRITGMQNFNLNEFGLIPINVATWGPFILLNVEKE--SKLQQGVEGSMVENEWLGSCSEIL-------KNGGVDSSLNHVCRRVYNMECNWKVFCDNYLDGGYHVPYAHKALASGLKLDSYSTSVYEKVSIQRCEGSSTQSA 296
BLAST of NO16G02160 vs. NCBI_GenBank
Match: XP_012074438.1 (choline monooxygenase, chloroplastic [Jatropha curcas]) HSP 1 Score: 233.4 bits (594), Expect = 1.100e-57 Identity = 129/308 (41.88%), Postives = 175/308 (56.82%), Query Frame = 0 Query: 1 MKPFFTALSRRLVSSRCFRTPPSSP-SSLGRPLSTLLKDLPFLKQELA-RFDPTVPIESASTPPASWFTHPAFHALEMASVFAENPLCVGSTLHIPRPGDYFCGQVGTHPFIVLRDTVGKIKAFYNVCRHKGMRLVAGDKGQIDKTTFACPYHGWEYRLDGRLAKATRIRGIQNFSPKDYGLIEIPLHTWGPLIFLQFGRRVGKSRSSSSEGGVMEGEGRYSLAHLTPLRERLDAEFGFSTGLRHVARRMYRLKCNHKVVSDNFLDNAYHVPYAHPALGQALDLASYSATLHDRYSIQSCKGATPLSS 307 M + +S R +SSR + +P + RP T+ L Q+L FDP +PIE ASTPP+SW+T P+F E+ VF VG T I P D+F G++G F+V R+ GK+ AF+NVCRH G L +G GQ K+ F CPYH W Y LDG L KATRI G+QNF+ ++GLI I + TWGP I L + EG ++E E S + + G + L HV RR+Y ++CN KV DN+LD YHVPYAH AL L L SYS +++++ SIQ C+G++ S+ Sbjct: 3 MTTAISMISLRPISSRVHQIQQHNPIIAQHRPSLTVSFSLQTHCQKLVDEFDPHIPIEKASTPPSSWYTDPSFFDYELHRVFYRGWQAVGYTEQIKDPRDFFTGRLGNVEFLVCRNDDGKVHAFHNVCRHHGSLLASG-SGQ--KSCFVCPYHAWTYGLDGALLKATRITGMQNFNLNEFGLIPINVATWGPFILLNVEKE--SKLQQGVEGSMVENEWLGSCSEIL-------KNGGVDSSLNHVCRRVYNMECNWKVFCDNYLDGGYHVPYAHKALASGLKLDSYSTSVYEKVSIQRCEGSSTQSA 298
BLAST of NO16G02160 vs. NCBI_GenBank
Match: XP_019633636.1 (PREDICTED: choline monooxygenase, chloroplastic-like [Branchiostoma belcheri]) HSP 1 Score: 230.7 bits (587), Expect = 7.100e-57 Identity = 111/261 (42.53%), Postives = 155/261 (59.39%), Query Frame = 0 Query: 41 FLKQELARFDPTVPIESASTPPASWFTHPAFHALEMASVFAENPLCVGSTLHIPRPGDYFCGQVGTHPFIVLRDTVGKIKAFYNVCRHKGMRLVAGDKGQIDKTTFACPYHGWEYRLDGRLAKATRIRGIQNFSPKDYGLIEIPLHTWGPLIFLQFGRRVGKSRSSSSEGGVMEGEGRYSLAHLTPLRERLDAEFGFSTGLRHVARRMYRLKCNHKVVSDNFLDNAYHVPYAHPALGQALDLASYSATLHDRYSIQSCKGA 302 ++ +E+ +F P+E A+TPP+SWFT PA + LE +VF N + VG T + PG YF G VG PF+V+RD ++ F+NVCRH L D+G D F C YHGW Y LDGRL KA R+RGIQNFS +++GL + + WGPL+ + R G+ + E +T L+++LD + GF++GLR V RR YR+ CN KVV DN+LD YHV Y H L L + +Y + + YS+Q+C G+ Sbjct: 30 YVAEEVQKFCTETPVERATTPPSSWFTDPAIYGLEKRTVFKWNWVAVGRTDQVASPGQYFTGVVGDEPFLVVRDKSNTLRGFFNVCRHHAAILAGEDEGTAD--AFTCCYHGWTYGLDGRLTKAMRLRGIQNFSARNFGLKPMAVKAWGPLVLV---RPDGQEDGTDFE------------TQVTSLKDQLD-DLGFTSGLRFVERRRYRVNCNWKVVLDNYLDGGYHVEYLHRNLASNLSIDTYRTDVQELYSVQTCSGS 272
BLAST of NO16G02160 vs. NCBI_GenBank
Match: XP_008351406.1 (PREDICTED: choline monooxygenase, chloroplastic-like [Malus domestica]) HSP 1 Score: 229.9 bits (585), Expect = 1.200e-56 Identity = 112/263 (42.59%), Postives = 157/263 (59.70%), Query Frame = 0 Query: 40 PFLKQELARFDPTVPIESASTPPASWFTHPAFHALEMASVFAENPLCVGSTLHIPRPGDYFCGQVGTHPFIVLRDTVGKIKAFYNVCRHKGMRLVAGDKGQIDKTTFACPYHGWEYRLDGRLAKATRIRGIQNFSPKDYGLIEIPLHTWGPLIFLQFGRRVGKSRSSSSEGGVMEGEGRYSLAHLTPLRERLDAEFGFSTGLRHVARRMYRLKCNHKVVSDNFLDNAYHVPYAHPALGQALDLASYSATLHDRYSIQSCKGAT 303 P L + +F+PT+PIE A TPP+SW+T+P+F++LE+ ++F VG T I G++F G++G F+V +D GK++AF+NVCRH M L G K+ F CPYHGW Y LDG L KATRI GIQNF+ ++GL+ + + TWGP I L + V S+ G ++ E S A + + G T L V RR Y ++CN KV DN+LD YHVPYAH L L+L YS T++++ SIQ C+ + Sbjct: 39 PQLPSLVGQFEPTIPIERAGTPPSSWYTNPSFYSLEINTLFYRGWQAVGYTEQISNAGEFFTGRLGNVEFVVCQDGDGKLQAFHNVCRHHAMLLAYGSG---RKSCFVCPYHGWTYGLDGALLKATRITGIQNFNENEFGLVPLKVATWGPFILLNMEQNV------DSDPGSVQNEWLGSSAEVL-------SNNGIDTSLSFVCRRDYVIECNWKVFCDNYLDGGYHVPYAHKGLASGLNLDGYSTTMYEKVSIQKCENGS 285
BLAST of NO16G02160 vs. NCBI_GenBank
Match: XP_008391562.2 (PREDICTED: LOW QUALITY PROTEIN: choline monooxygenase, chloroplastic [Malus domestica]) HSP 1 Score: 229.6 bits (584), Expect = 1.600e-56 Identity = 112/260 (43.08%), Postives = 156/260 (60.00%), Query Frame = 0 Query: 40 PFLKQELARFDPTVPIESASTPPASWFTHPAFHALEMASVFAENPLCVGSTLHIPRPGDYFCGQVGTHPFIVLRDTVGKIKAFYNVCRHKGMRLVAGDKGQIDKTTFACPYHGWEYRLDGRLAKATRIRGIQNFSPKDYGLIEIPLHTWGPLIFLQFGRRVGKSRSSSSEGGVMEGEGRYSLAHLTPLRERLDAEFGFSTGLRHVARRMYRLKCNHKVVSDNFLDNAYHVPYAHPALGQALDLASYSATLHDRYSIQSCK 300 P L + +F+PT+PIE A TPP+SW+T+P+F++LE+ ++F VG T I G++F G++G F+V +D GK++AF+NVCRH M L G K+ F CPYHGW Y LDG L KATRI GIQNF+ ++GL+ + + TWGP I L + V S+ G ++ E S A + + G T L V RR Y ++CN KV DN+LD YHVPYAH L L+L YS T++++ SIQ C+ Sbjct: 39 PQLPSLVGQFEPTIPIERAGTPPSSWYTNPSFYSLEIBTLFYRGWQAVGYTEQISNAGEFFTGRLGNVEFVVCQDGDGKLQAFHNVCRHHAMLLAYGSG---RKSCFVCPYHGWTYGLDGALLKATRITGIQNFNENEFGLVPLKVATWGPFILLNMEQNV------DSDPGSVQNEWLGSSAEVL-------SNNGIDTSLSFVCRRDYVIECNWKVFCDNYLDGGYHVPYAHKGLASGLNLDGYSTTMYEKVSIQKCE 282
BLAST of NO16G02160 vs. NCBI_GenBank
Match: XP_018807260.1 (PREDICTED: choline monooxygenase, chloroplastic isoform X1 [Juglans regia] >XP_018807261.1 PREDICTED: choline monooxygenase, chloroplastic isoform X1 [Juglans regia]) HSP 1 Score: 229.6 bits (584), Expect = 1.600e-56 Identity = 118/255 (46.27%), Postives = 148/255 (58.04%), Query Frame = 0 Query: 48 RFDPTVPIESASTPPASWFTHPAFHALEMASVFAENPLCVGSTLHIPRPGDYFCGQVGTHPFIVLRDTVGKIKAFYNVCRHKGMRLVAGDKGQIDKTTFACPYHGWEYRLDGRLAKATRIRGIQNFSPKDYGLIEIPLHTWGPLIFLQFGRRVGKSRSSSSEGGVMEGEGRYSLAHLTPLRERLDAEFGFSTGLRHVARRMYRLKCNHKVVSDNFLDNAYHVPYAHPALGQALDLASYSATLHDRYSIQSCKGAT 303 +FDP VPIE A TPP+SW+ HP+F LE+ VF VG I P D+F G++G F+V RD GKI AF+NVCRH L +G GQ K+ F CPYH W Y LDG L KATRI GIQNF+ ++GLI I + TWGP I L + + R + S+ E G S + + G + L +V RR Y ++CN KV DN+LD YHVPYAH L L L SYS T+ + SIQSC+G T Sbjct: 64 QFDPKVPIEEAVTPPSSWYKHPSFLELELHRVFYRGWQAVGHIQQIKDPHDFFTGRLGDVEFVVCRDDSGKIHAFHNVCRHHASLLASG-SGQ--KSCFVCPYHAWTYGLDGHLVKATRIMGIQNFNVNEFGLIPIKVATWGPFILLNLDKWISPLREADSDTVADEWLGSCS---------EILSTNGVDSLLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLAFGLQLQSYSTTIFENVSIQSCEGGT 306
BLAST of NO16G02160 vs. NCBI_GenBank
Match: XP_024194712.1 (choline monooxygenase, chloroplastic-like isoform X2 [Rosa chinensis] >PRQ37103.1 putative choline monooxygenase [Rosa chinensis]) HSP 1 Score: 229.2 bits (583), Expect = 2.100e-56 Identity = 124/302 (41.06%), Postives = 166/302 (54.97%), Query Frame = 0 Query: 1 MKPFFTALSRRLVSSRCFRTPPSSPSSLGRPLSTLLKDLPFLKQELARFDPTVPIESASTPPASWFTHPAFHALEMASVFAENPLCVGSTLHIPRPGDYFCGQVGTHPFIVLRDTVGKIKAFYNVCRHKGMRLVAGDKGQIDKTTFACPYHGWEYRLDGRLAKATRIRGIQNFSPKDYGLIEIPLHTWGPLIFLQFGRRVGKSRSSSSEGGVMEGEGRYSLAHLTPLRERLDAEFGFSTGLRHVARRMYRLKCNHKVVSDNFLDNAYHVPYAHPALGQALDLASYSATLHDRYSIQSCKGAT 303 M+P L L S R F++ S+G P TL+ +FDPT+PIE A TPP+SW+T P+F+A E+ SVF VG T I PGD+F G++G F+V RD GK++AF+NVCRH L G K+ F CPYH W Y LDG L KATRI GIQNF+ ++GL + + TWGP + V S+ ++E E S + + G T L +V RR Y ++CN KV DN+LD YHVPYAH L L+L YS T++++ SIQ C+G + Sbjct: 17 MRPKSPYLPHSLNSRRIFKSLSLPKPSVGAP--TLVD----------QFDPTIPIERAVTPPSSWYTDPSFYAQELDSVFYRGWQAVGYTEQIKNPGDFFTGRLGNVEFVVCRDEHGKLQAFHNVCRHHASILAYGSG---RKSCFVCPYHAWTYGLDGALLKATRITGIQNFNKHEFGLTPVKVATWGPFVLANMEPEV------DSDVEIVESEWLGSSSDVLSTN-------GVDTSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLNLDGYSTTVYEKVSIQKCEGGS 290 The following BLAST results are available for this feature:
BLAST of NO16G02160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G02160 ID=NO16G02160|Name=NO16G02160|organism=Nannochloropsis oceanica|type=gene|length=1753bpback to top protein sequence of NO16G02160.1 >NO16G02160.1-protein ID=NO16G02160.1-protein|Name=NO16G02160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=359bpback to top Synonyms
Publications
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