NO16G02140, NO16G02140 (gene) Nannochloropsis oceanica

Overview
NameNO16G02140
Unique NameNO16G02140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length800
Alignment locationchr16:624536..625335 -

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Properties
Property NameValue
DescriptionMago nashi
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:624536..625335 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR036605Mago_nashi_sf
IPR004023Mago_nashi
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
[Close]
BLAST of NO16G02140 vs. NCBI_GenBank
Match: EWM23902.1 (mago nashi [Nannochloropsis gaditana])

HSP 1 Score: 282.3 bits (721), Expect = 8.600e-73
Identity = 135/150 (90.00%), Postives = 142/150 (94.67%), Query Frame = 0 
Query:    1 MSSGDDFYLRYYVGHTGKFGHEFMEFEIQPSGQLRYANNSNYKNAKMIRKQVYVSQTVLDEFRRIVEESQVVAEDDKDWPEPDRVGKQELEVRMGDDHIRFTCSKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPIPT 151
            M+ GD FYLRYYVGH GKFGHEFMEFEI PSG LRYANNS YKNAKMIRKQVY+SQTVL EF+RIVEESQ+VAEDDKDWPEPDRVGKQELEVR+G+ HIRFTC+KIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPIPT
Sbjct:    6 MTVGDGFYLRYYVGHKGKFGHEFMEFEINPSGLLRYANNSKYKNAKMIRKQVYLSQTVLSEFQRIVEESQIVAEDDKDWPEPDRVGKQELEVRLGESHIRFTCAKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPIPT 155
[Close]
BLAST of NO16G02140 vs. NCBI_GenBank
Match: XP_005854176.1 (protein mago nashi [Nannochloropsis gaditana CCMP526] >EKU22187.1 protein mago nashi [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 269.2 bits (687), Expect = 7.500e-69
Identity = 129/144 (89.58%), Postives = 136/144 (94.44%), Query Frame = 0 
Query:    1 MSSGDDFYLRYYVGHTGKFGHEFMEFEIQPSGQLRYANNSNYKNAKMIRKQVYVSQTVLDEFRRIVEESQVVAEDDKDWPEPDRVGKQELEVRMGDDHIRFTCSKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFK 145
            M+ GD FYLRYYVGH GKFGHEFMEFEI PSG LRYANNS YKNAKMIRKQVY+SQTVL EF+RIVEESQ+VAEDDKDWPEPDRVGKQELEVR+G+ HIRFTC+KIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFK
Sbjct:    1 MTVGDGFYLRYYVGHKGKFGHEFMEFEINPSGLLRYANNSKYKNAKMIRKQVYLSQTVLSEFQRIVEESQIVAEDDKDWPEPDRVGKQELEVRLGESHIRFTCAKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFK 144
[Close]
BLAST of NO16G02140 vs. NCBI_GenBank
Match: XP_008892969.1 (hypothetical protein PPTG_01421 [Phytophthora parasitica INRA-310] >ETI45490.1 hypothetical protein F443_09922 [Phytophthora parasitica P1569] >ETN21143.1 hypothetical protein PPTG_01421 [Phytophthora parasitica INRA-310])

HSP 1 Score: 243.8 bits (621), Expect = 3.400e-61
Identity = 112/149 (75.17%), Postives = 132/149 (88.59%), Query Frame = 0 
Query:    1 MSSGDDFYLRYYVGHTGKFGHEFMEFEIQPSGQLRYANNSNYKNAKMIRKQVYVSQTVLDEFRRIVEESQVVAEDDKDWPEPDRVGKQELEVRMGDDHIRFTCSKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPIP 150
            M S DDFY+RYYVGH GKFGHEFMEFE + +G+LRYANNSNYK   MIRK+V VSQ+V+DE +RI+ +S++  EDDK+WPEPDRVG+QELEV +G+DHI FTC+KIGSLLDVQDSKDPEGLR+ YYLVQDL+CL+FSLI LHFKIKPIP
Sbjct:    1 MPSDDDFYVRYYVGHRGKFGHEFMEFEFRSNGKLRYANNSNYKKDSMIRKEVTVSQSVIDEVKRIISDSEITKEDDKEWPEPDRVGRQELEVVLGNDHISFTCAKIGSLLDVQDSKDPEGLRVLYYLVQDLKCLVFSLITLHFKIKPIP 149
[Close]
BLAST of NO16G02140 vs. NCBI_GenBank
Match: XP_009526433.1 (hypothetical protein PHYSODRAFT_314749 [Phytophthora sojae] >EGZ17375.1 hypothetical protein PHYSODRAFT_314749 [Phytophthora sojae])

HSP 1 Score: 243.4 bits (620), Expect = 4.400e-61
Identity = 112/149 (75.17%), Postives = 130/149 (87.25%), Query Frame = 0 
Query:    1 MSSGDDFYLRYYVGHTGKFGHEFMEFEIQPSGQLRYANNSNYKNAKMIRKQVYVSQTVLDEFRRIVEESQVVAEDDKDWPEPDRVGKQELEVRMGDDHIRFTCSKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPIP 150
            M   DDFY+RYYVGH GKFGHEFMEFE +  G+LRYANNSNYK   MIRK+V VSQ+V+DE +RI+ +S++  EDDK+WPEPDRVG+QELEV +GDDHI FTC+KIGSLLDVQDSKDPEGLR+ YYLVQDL+CL+FSLI LHFKIKPIP
Sbjct:    1 MPRDDDFYVRYYVGHRGKFGHEFMEFEFRADGKLRYANNSNYKKDSMIRKEVTVSQSVIDEVKRIISDSEITKEDDKEWPEPDRVGRQELEVVLGDDHISFTCAKIGSLLDVQDSKDPEGLRVLYYLVQDLKCLVFSLITLHFKIKPIP 149
[Close]
BLAST of NO16G02140 vs. NCBI_GenBank
Match: ETK85442.1 (hypothetical protein L915_09719 [Phytophthora parasitica] >ETL38886.1 hypothetical protein L916_09623 [Phytophthora parasitica] >ETL91991.1 hypothetical protein L917_09546 [Phytophthora parasitica] >ETM45289.1 hypothetical protein L914_09589 [Phytophthora parasitica] >ETO74149.1 hypothetical protein F444_10017 [Phytophthora parasitica P1976] >ETP15314.1 hypothetical protein F441_09871 [Phytophthora parasitica CJ01A1] >ETP43390.1 hypothetical protein F442_09825 [Phytophthora parasitica P10297])

HSP 1 Score: 241.9 bits (616), Expect = 1.300e-60
Identity = 111/149 (74.50%), Postives = 131/149 (87.92%), Query Frame = 0 
Query:    1 MSSGDDFYLRYYVGHTGKFGHEFMEFEIQPSGQLRYANNSNYKNAKMIRKQVYVSQTVLDEFRRIVEESQVVAEDDKDWPEPDRVGKQELEVRMGDDHIRFTCSKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPIP 150
            M   DDFY+RYYVGH GKFGHEFMEFE + +G+LRYANNSNYK   MIRK+V VSQ+V+DE +RI+ +S++  EDDK+WPEPDRVG+QELEV +G+DHI FTC+KIGSLLDVQDSKDPEGLR+ YYLVQDL+CL+FSLI LHFKIKPIP
Sbjct:    1 MPRDDDFYVRYYVGHRGKFGHEFMEFEFRSNGKLRYANNSNYKKDSMIRKEVTVSQSVIDEVKRIISDSEITKEDDKEWPEPDRVGRQELEVVLGNDHISFTCAKIGSLLDVQDSKDPEGLRVLYYLVQDLKCLVFSLITLHFKIKPIP 149
[Close]
BLAST of NO16G02140 vs. NCBI_GenBank
Match: XP_024586815.1 (protein mago nashi [Plasmopara halstedii] >CEG50446.1 protein mago nashi [Plasmopara halstedii])

HSP 1 Score: 239.6 bits (610), Expect = 6.400e-60
Identity = 111/149 (74.50%), Postives = 129/149 (86.58%), Query Frame = 0 
Query:    1 MSSGDDFYLRYYVGHTGKFGHEFMEFEIQPSGQLRYANNSNYKNAKMIRKQVYVSQTVLDEFRRIVEESQVVAEDDKDWPEPDRVGKQELEVRMGDDHIRFTCSKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPIP 150
            M   DDFY+RYYVGH GKFGHEFMEFE +  G+LRYANNSNYK   MIRK+V VSQ+V++E +RI+ ES++  E+DKDWPEPDRVG+QELEV + DDHI FTC+KIGSLLDVQDSKDPEGLR+ YYLVQDL+CL+FSLI LHFKIKPIP
Sbjct:    1 MPRDDDFYVRYYVGHRGKFGHEFMEFEFRADGKLRYANNSNYKKDSMIRKEVTVSQSVINEVKRIISESEITKENDKDWPEPDRVGRQELEVVLDDDHISFTCAKIGSLLDVQDSKDPEGLRVLYYLVQDLKCLVFSLITLHFKIKPIP 149
[Close]
BLAST of NO16G02140 vs. NCBI_GenBank
Match: XP_014784804.1 (PREDICTED: protein mago nashi homolog [Octopus bimaculoides] >KOF71065.1 hypothetical protein OCBIM_22001733mg [Octopus bimaculoides])

HSP 1 Score: 235.3 bits (599), Expect = 1.200e-58
Identity = 108/148 (72.97%), Postives = 129/148 (87.16%), Query Frame = 0 
Query:    1 MSSGDDFYLRYYVGHTGKFGHEFMEFEIQPSGQLRYANNSNYKNAKMIRKQVYVSQTVLDEFRRIVEESQVVAEDDKDWPEPDRVGKQELEVRMGDDHIRFTCSKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPI 149
            M S  DFYLRYYVGH GKFGHEF+EFE +P G+LRYANNSNYKN  MIRK+ YV ++V++E +RI+E+S+V+ EDD+ WP PDRVG+QELE+ +GD+HI FT SKIGSL+DV  SKDPEGLRIFYYLVQDL+CL+FSLIGLHFKIKPI
Sbjct:    1 MGSSSDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVHKSVMEELKRIIEDSEVMREDDELWPSPDRVGRQELEIVIGDEHISFTTSKIGSLVDVNQSKDPEGLRIFYYLVQDLKCLVFSLIGLHFKIKPI 148
[Close]
BLAST of NO16G02140 vs. NCBI_GenBank
Match: PHJ25815.1 (protein mago nashi [Cystoisospora suis])

HSP 1 Score: 235.0 bits (598), Expect = 1.600e-58
Identity = 106/147 (72.11%), Postives = 127/147 (86.39%), Query Frame = 0 
Query:    2 SSGDDFYLRYYVGHTGKFGHEFMEFEIQPSGQLRYANNSNYKNAKMIRKQVYVSQTVLDEFRRIVEESQVVAEDDKDWPEPDRVGKQELEVRMGDDHIRFTCSKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPI 149
            S GDDFYLRYYVGH GKFGHEF+EFE +P G+LRYANNSNYKN  MIRK+ YVSQ+V+ E RRIVE+S+++ EDD +WP PDRVG+QELE+ +G DHI FT SKIGS+ DVQ SKD +GLR+FYYLVQDL+C +FSLIGLHF+IKP+
Sbjct:    4 SDGDDFYLRYYVGHKGKFGHEFLEFEFRPEGRLRYANNSNYKNDTMIRKEAYVSQSVMKELRRIVEDSEIIKEDDNNWPAPDRVGRQELEIVLGKDHISFTTSKIGSMADVQRSKDQDGLRVFYYLVQDLKCFIFSLIGLHFRIKPV 150
[Close]
BLAST of NO16G02140 vs. NCBI_GenBank
Match: NP_079840.2 (protein mago nashi homolog 2 isoform 1 [Mus musculus] >XP_005369261.1 PREDICTED: protein mago nashi homolog 2 [Microtus ochrogaster] >XP_021046615.1 protein mago nashi homolog 2 isoform X1 [Mus pahari] >XP_021021078.1 protein mago nashi homolog 2 isoform X1 [Mus caroli] >BAB24516.2 unnamed protein product [Mus musculus] >EDL20883.1 RIKEN cDNA 2010012C16, isoform CRA_c [Mus musculus] >AHX83791.1 mago nashi protein [Mus musculus])

HSP 1 Score: 233.8 bits (595), Expect = 3.500e-58
Identity = 106/148 (71.62%), Postives = 128/148 (86.49%), Query Frame = 0 
Query:    1 MSSGDDFYLRYYVGHTGKFGHEFMEFEIQPSGQLRYANNSNYKNAKMIRKQVYVSQTVLDEFRRIVEESQVVAEDDKDWPEPDRVGKQELEVRMGDDHIRFTCSKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPI 149
            MS G DFYLRYYVGH GKFGHEF+EFE +P G+LRYANNSNYKN  MIRK+ YV ++V++E +RI+++S++  EDD  WP PDRVG+QELE+ +GD+HI FT SKIGSL+DV  SKDPEGLR+FYYLVQDL+CL+FSLIGLHFKIKPI
Sbjct:    1 MSMGSDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI 148
[Close]
BLAST of NO16G02140 vs. NCBI_GenBank
Match: XP_008613681.1 (protein mago nashi like 2 [Saprolegnia diclina VS20] >XP_012201913.1 mago nashi 2 [Saprolegnia parasitica CBS 223.65] >EQC32995.1 protein mago nashi like 2 [Saprolegnia diclina VS20] >KDO27476.1 mago nashi 2 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 233.8 bits (595), Expect = 3.500e-58
Identity = 108/149 (72.48%), Postives = 129/149 (86.58%), Query Frame = 0 
Query:    1 MSSGDDFYLRYYVGHTGKFGHEFMEFEIQPSGQLRYANNSNYKNAKMIRKQVYVSQTVLDEFRRIVEESQVVAEDDKDWPEPDRVGKQELEVRMGDDHIRFTCSKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPIP 150
            M+  DDFYLRYYVGH GKFGHE+MEFE+Q +G+LRYANNSNYKN  +I K+V VSQ+VLDEF+RI+E S++  EDD+ WP  DRVGKQELE+ + D HI F+C+KIGSLLDVQDS DPEGLR+FYYLVQDL+C++FSLI LHFKIKPIP
Sbjct:    1 MARRDDFYLRYYVGHKGKFGHEYMEFELQSNGRLRYANNSNYKNDSIIEKEVVVSQSVLDEFKRIIESSEIANEDDRKWPISDRVGKQELELILDDKHISFSCAKIGSLLDVQDSDDPEGLRVFYYLVQDLKCMVFSLITLHFKIKPIP 149
The following BLAST results are available for this feature:
BLAST of NO16G02140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23902.18.600e-7390.00mago nashi [Nannochloropsis gaditana][more]
XP_005854176.17.500e-6989.58protein mago nashi [Nannochloropsis gaditana CCMP5... [more]
XP_008892969.13.400e-6175.17hypothetical protein PPTG_01421 [Phytophthora para... [more]
XP_009526433.14.400e-6175.17hypothetical protein PHYSODRAFT_314749 [Phytophtho... [more]
ETK85442.11.300e-6074.50hypothetical protein L915_09719 [Phytophthora para... [more]
XP_024586815.16.400e-6074.50protein mago nashi [Plasmopara halstedii] >CEG5044... [more]
XP_014784804.11.200e-5872.97PREDICTED: protein mago nashi homolog [Octopus bim... [more]
PHJ25815.11.600e-5872.11protein mago nashi [Cystoisospora suis][more]
NP_079840.23.500e-5871.62protein mago nashi homolog 2 isoform 1 [Mus muscul... [more]
XP_008613681.13.500e-5872.48protein mago nashi like 2 [Saprolegnia diclina VS2... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL153nonsL153Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR035ngnoR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003203NSK003203Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G02140.1NO16G02140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593776gene_6108Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100113g5gene6552Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G02140.1NO16G02140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G02140 ID=NO16G02140|Name=NO16G02140|organism=Nannochloropsis oceanica|type=gene|length=800bp
ATGAGCAGCGGCGACGACTTCTATCTCCGCTACTATGTGGGGCACACAGG
AAAATTCGGTCACGAATTCATGGAATTTGAGATCCAGCCCTCCGGCCAGC
TACGGTACGCCAACAATAGCAACTACAAGAACGCCAAGATGATCCGCAAG
CAAGgtacgttcgttaggaagggaggaaggaggtgggacaggaagggaaa
caaggaaagcctcataacgcgtgatgcgcgtcgttttaaacttcaactta
tgcgtccatttgcttcactaaagTGTATGTCTCCCAAACGGTGCTGGACG
AATTTCGGCGCATCGTGGAGGAGTCCCAGGTAGTGGCAGAAGACGACAAA
GACTGGCCGGAGCCTGATAGGGTTGGGAAACAAGAGCTGGAAGTCCGTAT
GGGCGATGATCACATTCGGTTTACCTGCTCGAAGATTGGGTCGCTGCTGG
ATGTGCAAGACAGCAAGGATCCGGAGGGTTTGAGGATATTTTATTACTTG
GTTCAGGACTTGCGGTGTTTGTTGTTTTCATTGATTGGATTGCATTTCAA
Ggtaagatctgcaaggaaagtgggggaatggagggaatgggaggtggcac
tgtcgtccagatacatgcggaaagggtggagtggagggaacgtagggaat
tataggtgaagatcaatttacgcagacactgcgggaatgactacagatca
ttgacgcgggtgcggacaaagcgggtggctcacattttcatcttcatttt
tccttttcccaactcacgcgaccacacagATCAAACCCATTCCCACCTAA
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protein sequence of NO16G02140.1

>NO16G02140.1-protein ID=NO16G02140.1-protein|Name=NO16G02140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=151bp
MSSGDDFYLRYYVGHTGKFGHEFMEFEIQPSGQLRYANNSNYKNAKMIRK
QVYVSQTVLDEFRRIVEESQVVAEDDKDWPEPDRVGKQELEVRMGDDHIR
FTCSKIGSLLDVQDSKDPEGLRIFYYLVQDLRCLLFSLIGLHFKIKPIPT
*
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Synonyms
Publications