NO16G02100, NO16G02100 (gene) Nannochloropsis oceanica

Overview
NameNO16G02100
Unique NameNO16G02100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length705
Alignment locationchr16:617607..618311 -

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Properties
Property NameValue
DescriptionAdenine phosphoribosyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:617607..618311 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009116nucleoside metabolic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029057PRTase-like
IPR000836PRibTrfase_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
BLAST of NO16G02100 vs. NCBI_GenBank
Match: XP_005854175.1 (adenine phosphoribosyltransferase [Nannochloropsis gaditana CCMP526] >EKU22186.1 adenine phosphoribosyltransferase [Nannochloropsis gaditana CCMP526] >EWM23913.1 adenine phosphoribosyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 343.2 bits (879), Expect = 5.700e-91
Identity = 167/201 (83.08%), Postives = 185/201 (92.04%), Query Frame = 0
Query:    1 MADNNFATAPDYEEDKRKIAAVIPYYAFHGIDRFYDISGLMLDPALFRRTVEILAERYKGQAIDKIGGFDARGFVLGTPLALALEVPFFMLRKQSKLPNSVTGASYTKEYKGDDGQGGDALCISRTAIQPGDRVLLIDDLIATGGTLMAGLDLVKAQQGVVVEAACMIELGFLGGGKKVREKHPDVSVWSFISEKHLQTKG 202
            MA  N AT+ DYEEDKRKIAAVIPYYAF GIDRFYDISGL+L PAL RRT+EIL ERYKG AIDKIGGFDARGF+LGTPLAL L++PFFMLRKQSKLPNSVTG SYTKEY+GDDG+GGDALCISRTAI PGD+VLL+DDLIATGGTL+AGLDLV A+QGVVVEAACMIELGFL GGKKVRE++P+V+VWS +SE HLQT+G
Sbjct:    1 MAGVNPATSQDYEEDKRKIAAVIPYYAFKGIDRFYDISGLLLSPALLRRTIEILVERYKGMAIDKIGGFDARGFLLGTPLALELDIPFFMLRKQSKLPNSVTGDSYTKEYEGDDGKGGDALCISRTAIIPGDKVLLVDDLIATGGTLLAGLDLVHARQGVVVEAACMIELGFLEGGKKVRERNPNVTVWSLLSEDHLQTRG 201          
BLAST of NO16G02100 vs. NCBI_GenBank
Match: CBJ28276.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 210.7 bits (535), Expect = 4.400e-51
Identity = 101/160 (63.12%), Postives = 120/160 (75.00%), Query Frame = 0
Query:   43 DPALFRRTVEILAERYKGQAIDKIGGFDARGFVLGTPLALALEVPFFMLRKQSKLPNSVTGASYTKEYKGDDGQGGDALCISRTAIQPGDRVLLIDDLIATGGTLMAGLDLVKAQQGVVVEAACMIELGFLGGGKKVREKHPDVSVWSFISEKHLQTKGE 203
            DP  F   V+I A+RY+G  ID IGGFDARGF+LG P+ALAL +PFFMLRK+ K+PN + GA+Y+KEYKGDDG G DALC+ R+A   G RV+L+DDL+ATGGTLMAG+DLVK     VVE ACMIEL  L G  K+ E+H DV VWS ISE  L  KGE
Sbjct:    4 DPEAFALAVKIFADRYRGMKIDSIGGFDARGFILGPPVALALNIPFFMLRKKGKMPNVIDGAAYSKEYKGDDGAGQDALCVQRSAATAGQRVVLVDDLVATGGTLMAGVDLVKGLGAEVVECACMIELKALNGVGKLHERHADVPVWSLISENILTVKGE 163          
BLAST of NO16G02100 vs. NCBI_GenBank
Match: KOO34727.1 (adenine phosphoribosyltransferase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 186.8 bits (473), Expect = 6.800e-44
Identity = 102/219 (46.58%), Postives = 138/219 (63.01%), Query Frame = 0
Query:    8 TAPDYEED---KRKIAAVIPYYAFHGIDRFYDISGLMLDPALFRRTVEILAERYKGQAIDKIGGFDARGFVLGTPLALALEVPFFMLRKQSKLPNSVTGASYTKEYKGDDG---------QGGDALCISRTAIQPGDRVLLIDDLIATGGTLMAGLDLVKAQQGVVVEAACMIEL----------GFLGGGKKVREKH-PDVSVWSFISEKHLQTKGEV 204
            T+  YE+D    ++IAAVIPYY F GI RFYDI+G +  P +F+  V+I   RY+G+ ID IGGFDARGFVLG P+ALAL++PFFM RK  K+PN ++ ++++ EY   +G           GD + +  T ++ GDRVLLIDDL+ATGGTL +G++LV+     VVE AC++EL          G     K  +EK   DV VW  ISE  L  +GE+
Sbjct:   13 TSAAYEQDGEAAKRIAAVIPYYPFKGIARFYDITGFLTRPDIFQEVVDIFVARYRGKQIDSIGGFDARGFVLGPPIALALKIPFFMFRKPGKMPNGISSSAFSVEYGKREGMCLPRGMPLHKGDPM-MKSTVVKEGDRVLLIDDLVATGGTLSSGIELVRKVGATVVECACVVELKLFIDPPPESGLPNRTKMWKEKGIDDVPVWGLISEDVLTLQGEL 230          
BLAST of NO16G02100 vs. NCBI_GenBank
Match: GBG28560.1 (Adenine phosphoribosyltransferase [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 184.5 bits (467), Expect = 3.400e-43
Identity = 91/196 (46.43%), Postives = 126/196 (64.29%), Query Frame = 0
Query:   13 EEDKRKIAAVIPYYAFHGIDRFYDISGLMLDPALFRRTVEILAERYKGQAIDKIGGFDARGFVLGTPLALALEVPFFMLRKQSKLPNSVTGASYTKEYKGDDGQGGDALCISRTAIQPGDRVLLIDDLIATGGTLMAGLDLVKAQQGVVVEAACMIELGFLGGGKKVREK-HPDVSVWSFISEKHLQTKGEVMAKE 208
            +E ++++AAV PY+AF GI+RFYDI G +  P +F   + + A+  +    D I G DARGF+LG P+AL L  PFFM+RK+ KLPNS+TG  Y KEY+     G D LC+   A++PG RV++IDDL+ATGGT +A L+LVK   GV  E AC+IE+  LG  + + EK   D ++ S + E  L   GE  A +
Sbjct:  410 QEARQRVAAVTPYFAFKGIERFYDIGGFLKHPEVFEEVITLFADHLRDLEFDSICGLDARGFILGPPVALRLNKPFFMVRKEGKLPNSITGEKYGKEYE----SGQDRLCVPVDAVKPGQRVVVIDDLVATGGTALAALELVKRLGGVCTELACVIEIKALGARRLLEEKGFGDTNILSIVEEDLLTLAGEPAANK 601          
BLAST of NO16G02100 vs. NCBI_GenBank
Match: XP_009032924.1 (hypothetical protein AURANDRAFT_52161 [Aureococcus anophagefferens] >EGB11795.1 hypothetical protein AURANDRAFT_52161 [Aureococcus anophagefferens])

HSP 1 Score: 181.0 bits (458), Expect = 3.700e-42
Identity = 91/158 (57.59%), Postives = 114/158 (72.15%), Query Frame = 0
Query:   11 DYEED---KRKIAAVIPYYAFHGIDRFYDISGLMLDPALFRRTVEILAERYKGQAIDKIGGFDARGFVLGTPLALALEVPFFMLRKQSKLPNSVTGASYTKEYKGDDGQGGDALCISRTAIQPGDRVLLIDDLIATGGTLMAGLDLVKAQQGVVVEAA 166
            DY +D    ++IA+V PY+ F GIDRFYDI G + DP  F   VE+L ERY+   ID + G DARGFVLG PLALAL+ PFFMLRK+ K+PN+VTGA+Y KEY G+     DAL I R A++ GD+VL++DDL+ATGGTL+A LDL+    GVV E A
Sbjct:   17 DYTQDGPVAQRIASVTPYFPFKGIDRFYDIGGFLKDPEAFALVVEVLVERYRDADIDSVCGLDARGFVLGPPLALALKKPFFMLRKKGKMPNAVTGAAYAKEYAGN-----DALSIPRGAVKAGDKVLVVDDLVATGGTLLAALDLIAKFDGVVPECA 169          
BLAST of NO16G02100 vs. NCBI_GenBank
Match: OEU19770.1 (PRTase-like protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 178.3 bits (451), Expect = 2.400e-41
Identity = 92/201 (45.77%), Postives = 123/201 (61.19%), Query Frame = 0
Query:   14 EDKRKIAAVIPYYAFHGIDRFYDISGLMLDPALFRRTVEILAERYKGQAIDKIGGFDARGFVLGTPLALALEVPFFMLRKQSKLPNSVTGASYTKEYKGDDGQGGDALCISRTAIQPGDRVLLIDDLIATGGTLMAGLDLVKAQQGVVVEAACMIELGFL-----GGGKKVREK------HPDVSVWSFISEKHLQTKGEV 204
            E+ ++IA  +PY+ F GIDRFYDI G + +PA+F++ V+I  ERY+   ID + G DARGF+LG P+ALAL+ PF M+RK+ K+PN+V    Y  EY    G     L +    I+ GDRVL+IDDL+ATGGTL + + LVK   GVVVE AC++EL          G   R K      H DV VW  +SE  L  + E+
Sbjct:   13 EEAKEIAKYLPYFPFKGIDRFYDIGGFLYEPAVFQKIVDIFVERYQAIGIDVVAGLDARGFILGPPIALALKKPFIMMRKKGKMPNTVESKEYETEYGSRSG-----LTVQADKIKKGDRVLIIDDLVATGGTLSSAISLVKQLDGVVVECACVVELKLFIDPSEESGLPSRTKSFAKLGHQDVPVWGLVSEDILLNEAEL 208          
BLAST of NO16G02100 vs. NCBI_GenBank
Match: GAX09716.1 (adenine phosphoribosyltransferase [Fistulifera solaris])

HSP 1 Score: 173.7 bits (439), Expect = 5.900e-40
Identity = 95/217 (43.78%), Postives = 132/217 (60.83%), Query Frame = 0
Query:    1 MADNNFATAPDYEED---KRKIAAVIPYYAFHGIDRFYDISGLMLDPALFRRTVEILAERYKGQAIDKIGGFDARGFVLGTPLALALEVPFFMLRKQSKLPNSVTGASYTKEYKGDDGQGGDALCISRTAIQPGDRVLLIDDLIATGGTLMAGLDLVKAQQGVVVEAACMIELG-FLGGGKKV----------REKHPDVSVWSFISEKHLQTKGEV 204
            M+ NN  +  +Y++D    R+IA  +PY+ F GI RFYDI G + +PA+F++ V+I   RY+G A+D I G DARGFVLG P+ALAL+ PF M+RKQ K+PN+V+   Y  EY    G     L + R  IQ G RVL+IDDL+ATGGTL + + LVK   G+ VE AC++EL  F+   K+           +  H  V +W  ISE  L  + ++
Sbjct:    1 MSSNN-NSKDEYQQDGPEAREIAKYLPYFPFKGIPRFYDIGGFLYEPAIFQQIVDIFTVRYRGLAVDCIAGLDARGFVLGPPIALALQKPFVMMRKQGKMPNTVSSTQYETEYGSRSG-----LTVQRDRIQQGMRVLIIDDLVATGGTLSSAITLVKMLGGIPVECACVVELKMFINPPKESGLPSRTELFRKLGHDHVPIWGLISEDVLTLEAQL 211          
BLAST of NO16G02100 vs. NCBI_GenBank
Match: GAX19605.1 (adenine phosphoribosyltransferase [Fistulifera solaris])

HSP 1 Score: 172.9 bits (437), Expect = 1.000e-39
Identity = 92/205 (44.88%), Postives = 126/205 (61.46%), Query Frame = 0
Query:    4 NNFATAPDYEED---KRKIAAVIPYYAFHGIDRFYDISGLMLDPALFRRTVEILAERYKGQAIDKIGGFDARGFVLGTPLALALEVPFFMLRKQSKLPNSVTGASYTKEYKGDDGQGGDALCISRTAIQPGDRVLLIDDLIATGGTLMAGLDLVKAQQGVVVEAACMIELG-FLGGGKKV----------REKHPDVSVWSFISE 195
            NN  +  +Y++D    R+IA  +PY+ F GI RFYDI G + +PA+F++ V+I   RY+G A+D I G DARGFVLG P+ALAL+ PF M+RKQ K+PN+++   Y  EY    G     L + R  IQ G RVL+IDDL+ATGGTL + + LVK   G+ VE AC++EL  F+   K+           +  H  V +W  ISE
Sbjct:    3 NNNNSNDEYQQDGPEAREIAKYLPYFPFKGIPRFYDIGGFLYEPAIFQQIVDIFTARYRGLAVDCIAGLDARGFVLGPPIALALQKPFVMMRKQGKMPNTISSTQYETEYGSRSG-----LTVQRDRIQQGMRVLIIDDLVATGGTLSSAITLVKMLGGIPVECACVVELKMFIDPPKESGLPSRTELFRKLGHDHVPIWGLISE 202          
BLAST of NO16G02100 vs. NCBI_GenBank
Match: OLP80542.1 (Adenine phosphoribosyltransferase 1 [Symbiodinium microadriaticum])

HSP 1 Score: 167.9 bits (424), Expect = 3.300e-38
Identity = 92/196 (46.94%), Postives = 125/196 (63.78%), Query Frame = 0
Query:   11 DYEED---KRKIAAVIPYYAFHGIDRFYDISGLMLDPALFRRTVEILAERYKGQAIDKIGGFDARGFVLGTPLALALEVPFFMLRKQSKLPNSVTGASYTKEYKGDDGQGGDALCISRTAIQPGDRVLLIDDLIATGGTLMAGLDLVKAQQGVVVEAACMIELGFLGGGKKVREKHPDVSVWSFISEKHLQTKGEV 204
            D E D    ++IA  IPY+ F  I+RFYDI GL+  P L      + A+R++   + KI GF+ARGF L TP+++ L VPF MLRK  KLPN+++   YTKEY      G D +C+ + A+  GD+V+LIDDLIATGGTL AG+ L++A +  VVE +CM+EL  L G +K        SVW +ISE+ L TK E+
Sbjct:  148 DMESDGPLAKEIALHIPYFPFKKIERFYDIQGLLQHPKLLNAMCAVWAKRFRKMGVTKICGFEARGF-LFTPVSIKLGVPFVMLRKAGKLPNTISSGPYTKEY-----DGLDEMCVQKGAVVKGDKVVLIDDLIATGGTLCAGIKLMEACEAEVVECSCMVELKALKGREKCLAAGAK-SVWGYISEELLTTKAEL 336          
BLAST of NO16G02100 vs. NCBI_GenBank
Match: XP_008869642.1 (adenine phosphoribosyltransferase [Aphanomyces invadans] >XP_008869643.1 adenine phosphoribosyltransferase, variant [Aphanomyces invadans] >ETW01794.1 adenine phosphoribosyltransferase [Aphanomyces invadans] >ETW01795.1 adenine phosphoribosyltransferase, variant [Aphanomyces invadans])

HSP 1 Score: 158.3 bits (399), Expect = 2.600e-35
Identity = 86/196 (43.88%), Postives = 117/196 (59.69%), Query Frame = 0
Query:    2 ADNNFATAPDYEEDKRKIAAVIPYYAFHGIDRFYDISGLMLDPALFRRTVEILAERYK--GQAIDKIGGFDARGFVLGTPLALALEVPFFMLRKQSKLPNSVTGASYTKEYKGDDGQGG-DALCISRTAIQPGDRVLLIDDLIATGGTLMAGLDLVKAQQGVVVEAACMIELGFLGGGKKVREKHPDVSVWSFISE 195
            A N+       +E  R++AA IP   F G+  FYDI GL+  P  F   +++L    +     I  IG FDARGF+LG  +A+ L+   FMLRK +K+P       Y KEY GDD  GG D LCI   A+  GD+VLLIDDL+ATGGT+ AG+DLVK   G V+   C+IELG L G +++  +HP  +++  +SE
Sbjct:    4 AGNSMDQTHTDDERLRQVAACIPIVPFKGVS-FYDIGGLLASPVDFAICMDLLVAHVEPFANRITSIGCFDARGFLLGPVIAMRLKKKLFMLRKPNKMPRVSHSVRYGKEYAGDDPNGGDDGLCIQEGAVVAGDQVLLIDDLLATGGTMAAGVDLVKQCGGQVLACGCLIELGVLQGRQRILSRHPGTTIFHLLSE 198          
The following BLAST results are available for this feature:
BLAST of NO16G02100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854175.15.700e-9183.08adenine phosphoribosyltransferase [Nannochloropsis... [more]
CBJ28276.14.400e-5163.13conserved unknown protein [Ectocarpus siliculosus][more]
KOO34727.16.800e-4446.58adenine phosphoribosyltransferase [Chrysochromulin... [more]
GBG28560.13.400e-4346.43Adenine phosphoribosyltransferase [Aurantiochytriu... [more]
XP_009032924.13.700e-4257.59hypothetical protein AURANDRAFT_52161 [Aureococcus... [more]
OEU19770.12.400e-4145.77PRTase-like protein [Fragilariopsis cylindrus CCMP... [more]
GAX09716.15.900e-4043.78adenine phosphoribosyltransferase [Fistulifera sol... [more]
GAX19605.11.000e-3944.88adenine phosphoribosyltransferase [Fistulifera sol... [more]
OLP80542.13.300e-3846.94Adenine phosphoribosyltransferase 1 [Symbiodinium ... [more]
XP_008869642.12.600e-3543.88adenine phosphoribosyltransferase [Aphanomyces inv... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL153nonsL153Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR035ngnoR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003207NSK003207Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G02100.1NO16G02100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593760gene_6104Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100113g10gene6556Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G02100.1NO16G02100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G02100 ID=NO16G02100|Name=NO16G02100|organism=Nannochloropsis oceanica|type=gene|length=705bp
ATGGCCGATAACAACTTCGCCACGGCACCCGACTATGAGGAGGATAAGCG
CAAgtaagtaacaggcaggtcgtacatgcgcatggtcgatacacctagta
acctccccatccatatcgatctcttcttccctagAATCGCTGCCGTCATT
CCGTATTATGCCTTCCACGGCATCGACCGCTTCTACGACATCAGCGGGCT
CATGCTGGATCCGGCGTTGTTCCGTCGAACCGTGGAAATTCTGGCGGAGC
GTTACAAGGGCCAGGCAATCGATAAGATTGGTGGCTTTGATGCCCGTGGC
TTTGTGTTGGGCACGCCTCTGGCTTTGGCATTGGAAGTTCCTTTTTTCAT
GCTTCGGAAGCAAAGCAAGCTTCCAAATTCGGTGACAGGCGCGTCATACA
CTAAGGAGTATAAGGGCGATGATGGACAGGGGGGGGATGCGTTGTGTATT
TCTCGGACGGCTATTCAGCCCGGGGATCGGGTGCTGTTGATTGATGATTT
GATTGCGACAGGCGGGACGTTGATGGCGGGTTTGGACCTCGTGAAGGCCC
AACAAGGGGTGGTGGTGGAGGCGGCATGCATGATTGAATTGGGTTTCTTG
GGGGGAGGAAAGAAGGTGAGGGAGAAGCACCCGGATGTGAGTGTGTGGTC
GTTTATTTCAGAGAAGCACCTTCAGACGAAAGGAGAGGTGATGGCCAAGG
AATAG
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protein sequence of NO16G02100.1

>NO16G02100.1-protein ID=NO16G02100.1-protein|Name=NO16G02100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=208bp
MADNNFATAPDYEEDKRKIAAVIPYYAFHGIDRFYDISGLMLDPALFRRT
VEILAERYKGQAIDKIGGFDARGFVLGTPLALALEVPFFMLRKQSKLPNS
VTGASYTKEYKGDDGQGGDALCISRTAIQPGDRVLLIDDLIATGGTLMAG
LDLVKAQQGVVVEAACMIELGFLGGGKKVREKHPDVSVWSFISEKHLQTK
GEVMAKE*
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Synonyms
Publications