NO16G01760, NO16G01760 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G01760 vs. NCBI_GenBank
Match: XP_005704007.1 (hypothetical protein Gasu_49370 [Galdieria sulphuraria] >EME27487.1 hypothetical protein Gasu_49370 [Galdieria sulphuraria]) HSP 1 Score: 137.5 bits (345), Expect = 6.500e-29 Identity = 97/229 (42.36%), Postives = 128/229 (55.90%), Query Frame = 0
Query: 12 GKVVVLGAKGRTGRLILSHLKTLG-----AKEVLAVARN--ITGETNDDVVKWEAGDVKDASHLSTVLKGASAVLFTASASQGWSLFGT--NTPKQVDYEGCVLTAKAAVQAKVPQLVIVSSAFVARPYHPIALMLSTLFGRVMQWKRKGELEAISITQQAGSVTSYTIVRPGGLSDKKTPKGLQGIQISQGDTVGGMITRDDTALVTAQALLYPTTKNTVFEVVWHQE 232
G VVV+GA G G+ + L++ G A + VAR + N V + DV + S LS+VLK A AV F ASAS GW + GT NTPKQVDY G V A+AA QAKV +LV+VSSA V L L++ FGR+M WKR+GEL I T + +YTIVRPG L ++ + KG + I + QGD + ++R D A + L T N FEV ++
Sbjct: 5 GLVVVIGATGPLGKECVLALESQGYHVRAASRRVEVAREMLLKSVKNPSRVDFVHVDVLENSVLSSVLKDAHAVFFCASASAGWRVPGTSKNTPKQVDYLGAVHVAEAAAQAKVKRLVLVSSAMVTNRTSFPYLFLNSSFGRIMHWKRQGELGVIE-THEKNPEMAYTIVRPGHLINEAS-KGAKSIMVDQGDRISWRVSRADVAQICCACLQVENTMNATFEVAGRKQ 231
BLAST of NO16G01760 vs. NCBI_GenBank
Match: CBJ33213.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 131.0 bits (328), Expect = 6.100e-27 Identity = 91/239 (38.08%), Postives = 134/239 (56.07%), Query Frame = 0
Query: 2 SSGSTSPSALGKVVVLGAKGRTGRLILSHLKTLGAKEVLAVAR----NITGETNDDVVKWEAGDVKDASHLSTVLKGASAVLFTASASQGWSLFGTNTPKQVDYEGCVLTAKAAVQAKVPQLVIVSSAFVARPYHPIALMLSTLFGRVMQWKRKGELEAISITQQAGSVTSYTIVRPGGLSDKKTPKGLQGIQISQGDTVGGMITRDDTALVTAQALLYPTTKNTVFEVVWHQEEKGKG 237
+S S + + V+GA G+TG+L + L G + V AV R ++ G D++ AGDV L L G AVLF ASAS+ G N + VDY+G + A+A V+ +P+LV++SS V +P + ++ +FG +M KRKGE+ I A +YTIVRPGGL+D G GI+++QGDT+GG + R D A V +A L P T+NT+FE+ ++K +G
Sbjct: 52 ASASEPGTKQSPIAVVGAGGKTGKLAVEGLLKRG-RNVRAVTRTGEFSLGGGDVGDLMTTAAGDVTKTDTLKQALAGCGAVLFCASASKK----GGNA-EAVDYQGVLNAAQACVELGIPRLVVISSGAVTKP-DSLGFKVTNVFGNIMTLKRKGEIGLEEIYAAAPKGLTYTIVRPGGLTDGAV-IGPAGIELNQGDTIGGTVGRGDVAEVVVEAALSPATENTIFEI---YDKKSRG 279
BLAST of NO16G01760 vs. NCBI_GenBank
Match: CBN74033.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 129.8 bits (325), Expect = 1.400e-26 Identity = 95/235 (40.43%), Postives = 130/235 (55.32%), Query Frame = 0
Query: 7 SPSALGKVVVLGAKGRTGRLILSHLKTLGAKEVLAVARNITGETNDDV-------VKWEAGDVKDASHLSTVLKGASAVLFTASAS-QGWSLFGTNTPKQVDYEGCVLTAKAAVQAKVPQLVIVSSAFVARPYHPIALMLSTLFGRVMQWKRKGELEAISITQQAGSVTSYTIVRPGGLSDKKTPKGLQGIQISQGDTVGGMITRDDTALVTAQALLYPTTKNTVFEVVWHQEEK 234
S + V VLGA G+TGR + +L + G V AVAR++T + + + + E DV S L V+KGASAV+F +SAS QG S K VDYEG V AKA ++AKVP+LV+VSS VA P I L+ LFG +M WK +GE + + A V YTIVRPGGL+ P+G+ I+++QGDT G I R D A V +++ ++ E + K
Sbjct: 105 SAATSSDVTVLGAGGKTGRECVEYLASKGT-GVRAVARSLTNKEGEPLAFTTTKGITMETADVTVPSSLPGVIKGASAVIFASSASKQGGS------AKAVDYEGVVNVAKACLEAKVPRLVVVSSGGVATPESSIYKFLN-LFGEIMSWKIQGE-DQLRSMYAAQDVCHYTIVRPGGLT-LDPPRGVGAIELNQGDTKSGRIARADVARVCVESIYSRNAEDCTLECYYKDTAK 329
BLAST of NO16G01760 vs. NCBI_GenBank
Match: XP_003080990.2 (NAD(P)-binding domain [Ostreococcus tauri] >CEG01640.1 NAD(P)-binding domain [Ostreococcus tauri]) HSP 1 Score: 117.9 bits (294), Expect = 5.300e-23 Identity = 84/221 (38.01%), Postives = 126/221 (57.01%), Query Frame = 0
Query: 10 ALGKVVVLGAKGRTGRLILSHLK-TLGAKEVLAVARNIT--GETNDDVVKWEAGDVKDAS--HLSTVLKGASAVLFTASASQGWSLFGTNTPKQVDYEGCVLTAKAAVQAKVPQLVIVSSAFVARPYHPIALMLSTLFGRVMQWKRKGELEAISITQQAGSVTSYTIVRPGGLSDKKTPKGLQGIQISQGDTVGGMITRDDTALVTAQALLYPTTKNTVFE 226
A KVVV+GA G+TGR + +L+ + AKE++A R+ T G DD VK A +V AS L+ GA AV+F AS SQ T QVD +G + A+A ++A V + VIVSS V++P P+ + L+ LFG +M+ K GE +A+ YT+VRPGGLS+ +G+ ++++QGD + G I+R+D A + +++ N FE
Sbjct: 49 ASDKVVVIGANGKTGRRCVEYLRSSTDAKEIVACTRSGTYEGGAADDRVKARAANVASASVAELANEFAGAKAVIFAASQSQ-----SGGTASQVDRDGVITCARACLRAGVERFVIVSSGAVSKPASPVYIFLN-LFGGIMRNKILGE-DAVRALYFDRPGQFYTVVRPGGLSEDPA-RGVSALELNQGDEMSGRISREDVAAICIESISREDAANATFE 261
BLAST of NO16G01760 vs. NCBI_GenBank
Match: XP_003058959.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH57414.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 117.5 bits (293), Expect = 6.900e-23 Identity = 85/242 (35.12%), Postives = 126/242 (52.07%), Query Frame = 0
Query: 7 SPSALGKVVVLGAKGRTGRLILSHLKTLGAKEV-------LAVARNITGETNDDVVKWEAGDVKDAS--HLSTVLKGASAVLFTASASQGWSLFGTNTPKQVDYEGCVLTAKAAVQAKVPQLVIVSSAFVARPYHPIALMLSTLFGRVMQWKRKGELEAISITQQAGSVTSYTIVRPGGLSDKKTPKGLQGIQISQGDTVGGMITRDDTALV---TAQALLYPTTKNTVFEVVWHQEEKGKG 237
+P + +VV GA G+TG+ ++H G V A A + +V +AGDV AS L ++ GA A++F ASAS G +P+ VD G V A+AA+ A VP+LVIVSS V++P P+ + L+ FG +M+ K +GE +A+ Y VRPGGL++ +G++ I+++QGD G I+R+D A + A+A P KN FE W K G
Sbjct: 57 APPSEKPIVVFGANGKTGKRCVAHAAKAGVPVVACTRSGSFASADLAMSADDQKLVTAKAGDVSKASQAELEALVSGAGAIIFAASASP-----GGGSPQDVDKAGLVAVARAAIAANVPRLVIVSSGSVSKPLSPVYVFLN-FFGGIMRAKIEGE-DAVRALYFNREDADYVCVRPGGLTE-DPGQGVRAIELNQGDDKSGRISREDVAAICVEAARAAGTPAAKNATFECYWKDTAKSLG 290
BLAST of NO16G01760 vs. NCBI_GenBank
Match: XP_024518484.1 (uncharacterized protein At5g02240 [Selaginella moellendorffii] >EFJ10002.1 hypothetical protein SELMODRAFT_269454 [Selaginella moellendorffii]) HSP 1 Score: 117.1 bits (292), Expect = 9.100e-23 Identity = 90/228 (39.47%), Postives = 119/228 (52.19%), Query Frame = 0
Query: 13 KVVVLGAKGRTGRLILSHLKTLGAKEVLAVARNITGET-----NDDVVKWEAGDVKDASHLSTVLKGASAVLFTASASQGWSLFGT---NTPKQVDYEGCVLTAKAAVQAKVPQLVIVSSAFVARPYHPIALMLSTLFGRVMQWKRKGEL---EAISITQQAGSVTSYTIVRPGGLSDKKTPKGLQGIQISQGDTVGGMITRDDTALVTAQALLYP--TTKNTVFEVV 228
KV+V+G+ G + L EV A+ RN+ T D VK+ GDV L+ +G V+ T A GW L G+ +TPK VDY G A+AA AKVP+ V+VSS V RPY PI+L+L+ + GRV+ WK KGE EA S ++ G Y I+RPGGL +K+ G + QGD G I R D AL+ AQA L N FE++
Sbjct: 2 KVLVVGSSSGCGLEVAKLLAASEEFEVFALVRNLERATKALDSTSDKVKFVLGDVTKPETLAPACEGMDGVVCTIGARAGWKLPGSVMEDTPKFVDYLGVKHLAEAAASAKVPKFVLVSSMGVTRPYSPISLILNAVKGRVLVWKLKGEAAVKEAYSQHEELG----YFIIRPGGLLNKE--GGQYKVIAEQGDKGLGTIARKDVALI-AQACLQGLCPQSNVTFEII 222
BLAST of NO16G01760 vs. NCBI_GenBank
Match: XP_002975082.1 (uncharacterized protein At5g02240 [Selaginella moellendorffii] >EFJ23867.1 hypothetical protein SELMODRAFT_271112 [Selaginella moellendorffii]) HSP 1 Score: 115.9 bits (289), Expect = 2.000e-22 Identity = 90/228 (39.47%), Postives = 119/228 (52.19%), Query Frame = 0
Query: 13 KVVVLGAKGRTGRLILSHLKTLGAKEVLAVARNITGET-----NDDVVKWEAGDVKDASHLSTVLKGASAVLFTASASQGWSLFGT---NTPKQVDYEGCVLTAKAAVQAKVPQLVIVSSAFVARPYHPIALMLSTLFGRVMQWKRKGEL---EAISITQQAGSVTSYTIVRPGGLSDKKTPKGLQGIQISQGDTVGGMITRDDTALVTAQALLYP--TTKNTVFEVV 228
KV+V+G+ G + L EV A+ RN+ T D VK+ GDV L+ +G V+ T A GW L G+ +TPK VDY G A+AA AKVP+ V+VSS V RPY PI+L+L+ + GRV+ WK KGE EA S ++ G Y I+RPGGL +K+ G I QGD G I R D A++ AQA L N FE++
Sbjct: 2 KVLVVGSSSGCGLEVAKLLAASEEFEVYALVRNLERATKALDSTSDKVKFVLGDVTKPETLAPACEGMDGVVCTIGARAGWKLPGSVMEDTPKFVDYLGVKHLAEAAASAKVPKFVLVSSMGVTRPYSPISLILNAVKGRVLVWKLKGEAAVKEAYSQHEELG----YFIIRPGGLLNKE--GGQYKIIAEQGDKGLGTIARKDVAVI-AQACLQGLCPLSNVTFEII 222
BLAST of NO16G01760 vs. NCBI_GenBank
Match: XP_007515782.1 (predicted protein [Bathycoccus prasinos] >CCO14661.1 predicted protein [Bathycoccus prasinos]) HSP 1 Score: 112.1 bits (279), Expect = 2.900e-21 Identity = 73/232 (31.47%), Postives = 126/232 (54.31%), Query Frame = 0
Query: 12 GKVVVLGAKGRTGRLILSHLKTLGAKEVLAVARN---------ITGETNDDVVKWEAGDVKDASHLSTVLKGASAVLFTASASQGWSLFGTNTPKQVDYEGCVLTAKAAVQAK-VPQLVIVSSAFVARPYHPIALMLSTLFGRVMQWKRKGELEAISITQQAGSVTSYTIVRPGGLSDKKTPKGLQGIQISQGDTVGGMITRDDTALVTAQALLYPTTKNTVFEVVWHQEEK 234
G++VV+GA G+TG+ + + G +V+A RN I E V + + ++ + GA +V+F AS+S+ +P+++D +GC+ A+A + +K V + V+V+S V++PY P+ + L+ LFG +M+ K +GE +A+ YTIVRPGGL++ P+G+ +++QGD V G ++R+D A V + L KN FE+ + K
Sbjct: 30 GQIVVIGANGKTGKRCVKYAAENG-WDVVAATRNGSFPSLTSDIKEEARGRVTTKQCSVTSSMAEITNAIDGAESVIFAASSSK-----DGGSPQEIDRDGCIKVARACLSSKSVKRYVVVTSGAVSKPYSPVYIFLN-LFGGIMRAKIEGE-DAVRALYYEREDDFYTIVRPGGLTE-DPPRGVSACELNQGDDVSGRVSREDVAAVCVECLKRDDAKNATFELYYRDTGK 252
BLAST of NO16G01760 vs. NCBI_GenBank
Match: XP_002181722.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46936.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 112.1 bits (279), Expect = 2.900e-21 Identity = 78/219 (35.62%), Postives = 121/219 (55.25%), Query Frame = 0
Query: 3 SGSTSPSALGKVVVLGAKGRTGRLILSHLKTLGAKEVLAVARNIT--GETNDDVVKWEAGDVKDASHLSTVLKGASAVLFTASASQGWSLFGTNTPKQVDYEGCVLTAKAAVQAKVPQLVIVSSAFVARPYHPIALMLSTLFGRVMQWKRKGELEAISITQQAGSVTS--YTIVRPGGLSDKKTPKGLQGIQISQGDTVGGMITRDDTALVTAQALLYP 218
+G+T + V+GA GRTG + G V A +R+ T G+++ +V DV + +S ++ AV+F ASAS+ TP QVD +G V A+A + K+P LV+VSS V +P P+ L+ LFG++M+ K KGE E + +G+ S YT++RPGGL++ P+G+ ++++QGDT G I R D A + +A YP
Sbjct: 98 AGNTIAVESSPICVIGANGRTGSQCVQACVERGI-PVRATSRSGTYNGDSSSKLVALLPCDVTKPATISRAIERCQAVIFCASASK-----NGGTPSQVDNDGLVNVARACLAQKIPHLVVVSSGAVTKPNSPVFQFLN-LFGKIMEEKIKGEDEVRRLYSMSGNQPSLVYTVIRPGGLTE-DAPRGVTALELNQGDTKSGRIARADVAALCIEATRYP 308
BLAST of NO16G01760 vs. NCBI_GenBank
Match: ADE75995.1 (unknown [Picea sitchensis]) HSP 1 Score: 112.1 bits (279), Expect = 2.900e-21 Identity = 69/182 (37.91%), Postives = 100/182 (54.95%), Query Frame = 0
Query: 55 VKWEAGDVKDASHLSTVLKGASAVLFTASASQGWSLFGTN--TPKQVDYEGCVLTAKAAVQAKVPQLVIVSSAFVARPYHPIALMLSTLFGRVMQWKRKGELEAISITQQAGSVTSYTIVRPGGLSDKKTPKGLQGIQISQGDTVGGMITRDDTALVTAQALLYPTTKNTVFEVVWHQEEKG 235
VK+ GD+ G AV+ T A+ GW + G N TPK VD+ G ++AA A VP+ V++SS V RP++ +++ L+T GR WK KGE EA+ + SY I+RPGGL++++ G GI + QGD G ITR D A V + T N+ FE +W+ +E+G
Sbjct: 55 VKFIDGDITKEDTFQPACNGMDAVVCTVGAAAGWRIPGYNQSTPKHVDFLGVKNLSEAAASAMVPKFVVISSVAVTRPWYWVSIFLNTFMGREFIWKLKGE-EALKEAYKKHEHISYYIIRPGGLTNRE--GGKHGIVVDQGDKGDGWITRVDVAHVALACVNGACTPNSTFE-IWNSKEEG 232 The following BLAST results are available for this feature:
BLAST of NO16G01760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G01760 ID=NO16G01760|Name=NO16G01760|organism=Nannochloropsis oceanica|type=gene|length=858bpback to top protein sequence of NO16G01760.1 >NO16G01760.1-protein ID=NO16G01760.1-protein|Name=NO16G01760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=286bpback to top Synonyms
Publications
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