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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr16 | genome | chr16:519905..523259 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005763 | mitochondrial small ribosomal subunit |
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR026140 | MRPS26 |
Homology
BLAST of NO16G01740 vs. NCBI_GenBank
Match: EWM23991.1 (hypothetical protein Naga_100027g47 [Nannochloropsis gaditana]) HSP 1 Score: 350.5 bits (898), Expect = 6.600e-93 Identity = 194/325 (59.69%), Postives = 229/325 (70.46%), Query Frame = 0
Query: 60 RSLATMPPYVKKFQTAKTAYASEVAAVRKEYIAQVQERKEAEQAXXXXXXXXXXXXXXXXXXXXXXXRKKNMAIFLQAQKEQRERFERYLAAMQEVREAYTSEVRAKQANLLKALTAESSLWITPENVDEKITDDLFAVAGRTTFTPTQRSRDWQFMALPRVPDFSAYSEEDLFDEKEDKHFLTDKSPWRAEEGSSIVIPEGHHFYTPGPAENLPRKLSSSSDSVDEEGVQGEEDNILYFEDAAYRPSFLAALYQGAYEDFQPSQVPDGEVEHIRELAERYEEQLQTILKQSR---GREGKMTGAGGAS---KKAAFDPKAFSIE 379
RSLA M P VK+FQ AK AYA+ VAAVRKEYIA+VQ++KE E+A RKKN++ FL+AQKE RYLAAMQEVREAY EVR KQ +L+ AL+AES+LWIT EN+DEKITDDLF VAGR TFTPT+RSRDW FMALPRVPDFSAYS+EDLFDEKED HFLT+KSPW +E S+I IPE H FY GPAE +PR ++ D++ + D +YF+DAAYRPS +AA++QGAY DF+PSQVPD EV+ IRELAERYEEQLQTIL S+ E + T S + FDPK FS E
Sbjct: 79 RSLAAMAPEVKRFQLAKQAYAARVAAVRKEYIAEVQQKKEQEEAKLRAETARIKEAKRQRLLVKAEERKKNLSTFLEAQKEXXXXXXRYLAAMQEVREAYVEEVRDKQKHLIDALSAESTLWITSENMDEKITDDLFDVAGRCTFTPTRRSRDWHFMALPRVPDFSAYSDEDLFDEKEDVHFLTEKSPWGHDEKSTINIPEEHEFYASGPAERVPRVVT------DDDTMSSSTDGNIYFKDAAYRPSLIAAIFQGAYADFKPSQVPDKEVKLIRELAERYEEQLQTILHSSQDDVNAEARGTSKSPTSTIADRGGFDPKVFSKE 397
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G01740 ID=NO16G01740|Name=NO16G01740|organism=Nannochloropsis oceanica|type=gene|length=3355bp
AGTGTTACAGCACACTATCTCGTCATACTAGTGTCGTTCTTGCTATCATA
AAACCGCTTTTGACAGCATACTGAGAGCTTTGCTACCTTACATGGCTGTA
CACACACACACCCCTCCCTCACAGTCCCTTGTTAGTCTGAAACGTGGCAA
TAAACCGACCCTGGCCATCTTTCAATCCCTGAAAATGAGGCTCGAGCTCC
GTCGCCTTGAAGGAGGCAGTTTGAGGAAACAAGGCCATACACACAGGCAG
GGCCCCTGCCAATGACCCCGTGATTGCAGCCACTTCAACAGCTAGACGCA
TTCGGGGGTTCTTGGGTAGAAGGCTTAGCTTGCCCAAGCCCTGCATTATG
GCATGCGGCAACAGCAGGACAGGCAAAGGGAAGATAAGCCCCCGAGAGAC
AGCCGTCTGTAACACGACACTCTTTCCTGCAATGAGGGATTGGCCGTGAT
ATTTGCCCGTGGCGTCGCTCATGGGTGCCCCTTCCCTCAGTTCATTTTGA
CGTGAAAACATAATGTTGCTCATACCAGCAGCCGAAACCGCAATGTATGA
AAAGAGCGCAGGGGAAGCTGCTGGGATTCGCTTGGCCACCTTGCCGAGCC
CCAAAGCTAGGGAGCAGGAAGTTACAACCGCCAACAGGTAGGACTGAAGT
ACTTGCGTGGTTTCTGCTTCCCCGCCCCCTGAGCGATTACTGAAATTAAC
GGCAGAATTATAAGTTTGATTGAGCCAATGCACAAAAAGAACGCTTCCTG
GAGATGTGGCATTCATCATCATTAACACAATGGGGACGTTGCCGGGCGTA
AAGGCCGACATCCGGAAGGGCACGGGAATGGCTTCCTTGCTCACGGGGTG
GGTGCAGGCTTCGAGGGTAGCTTTGCAGTCCCATAGCTCTTGGTCATCGT
GATGGATGCCCTTGCGCCAGTCCTGAATGATACTATCGCATCGTTGTAAT
TCTTGCGAAGGGGTGAAAAGTGTGCGGGGGTTCAAGACTCGGAGGAAGTG
ACTGAGGCGCCCGGCAAAGGTGTTGAGGTCGAACAGGGAGTTCGCGGGGT
CAAAGCGGGGTGGTTTGCTGGTGGGTGGTGCCGAAGTCATGGTTCTAGAG
GGTTGGAATGGGAGATGTCAGATCATTAGGATGAGAAAGACGAGCCGCTG
GTATGGAGGCAGTGGATGAGGCGCTGCGTGCAGCAGTTGCTGGGGCAAAA
TATGAAAGTTCTTTGAGTTTTCTCCCTTCGCCACAGTGAAAGGGACTGTT
AATCCCTTGTGGACACCGATAACGACATTTCGTAGCGTCCTCCGTGAGCG
TGGAAGGGTCTTAATAAGAGATTTTTGCTTGTAGGTTGAAAAGAGGGTTG
TGGGAGAGGAGGTATTTGATTTAACATGCCCCTTCATTTGTCACCAGTTT
GTCACCGTCATTGCATGCACGCAATACCCCGCACAAAACACGCAGACTGA
CGCCTCTTCACCATGCCCTGTTGATACTGCTGAATGGAGATATCTAGTGC
GCCGGAACGTGTGCTCATTATCCTTTCGTTGATTTCTACCTGAGATCTCA
TCTCCACGTCCACACAAACAGCTGCTCAAAACAGTCATGCGAGCGCTCCG
GCCAAGCGGCTGCACCTTGGTCGAGTGCGGCAGCAGCACCACCCTCATCG
TACAGCGGGTCGGCAGAGGAGTCCTGCCTGCGTCGGCGGCAGCGTCATCA
TCCTCATCATCATTACCATCCTCATCATCATCGAAGgtaagtttatcaaa
atgccaaccccatcttcgtgttctctatttgcctgtgcgtccaggtgtca
tgaaggaccctattgtttgtacgatgtattgctaccgttcgtgtattcaa
gaggtattgcctagataatggattttcacagccctctcctacctacaatt
gagttttgggggaacctaggaatgaattccagagcccttttgcacacgag
ttcccagtcattcactccatcctgccatgtggtcttacgtgtttgtttgt
ctgtttctttgcttgttggtgttacaccgggaagcaaaccctcgtaccaa
gtccctgtccttgcgcctgtcttgtcctcctgtctcaccacccaccaccc
cacctggtatcaaacacacacacagCCACGACCCTACCCTACTTTCAACC
TTCGCTCCCTCGCAACTATGCCCCCCTATGTCAAGAAGTTCCAAACCGCC
AAAACAGCCTACGCCTCCGAAGTAGCCGCGGTCCGGAAAGAGTACATTGC
GCAAGTTCAAGAACGCAAGGAAGCCGAACAAGCCAAGCAACTCGCCGAAA
CCGCCCGCATCAAAGAAGCCAAGCGTCAACGCCTCCTCGTTAAGGCTGCC
CAGCGTAAGAAGAATATGGCCATCTTTCTCCAGGCCCAAAAGGAGCAACG
AGAGCGATTTGAACGCTATCTCGCCGCAATGCAGGAGGTCCGCGAAGCCT
ACACTTCTGAAGTCCGAGCCAAGCAAGCCAATCTCCTCAAAGCCCTAACC
GCAGAGTCCTCCCTTTGGATCACGCCCGAAAACGTTGACGAGAAAATCAC
CGATGATCTTTTTGCTGTCGCGGGACGCACCACATTCACCCCAACCCAAC
GCAGTCGTGACTGGCAATTTATGGCCTTGCCCCGCGTGCCCGATTTCTCG
GCTTACTCGGAAGAGGACCTGTTTGATGAGAAGGAAGATAAACATTTTCT
GACAGATAAGAGCCCCTGGCGCGCGGAGGAAGGCTCATCGATTGTCATTC
CGGAAGGGCATCATTTCTATACTCCTGGACCTGCGGAAAACTTGCCGCGG
AAGTTGTCGTCGTCTTCGGATAGTGTTGATGAGGAGGGAGTACAGGGGGA
AGAGGACAATATTTTATACTTTGAAGATGCGGCATACCGACCTAGTTTCT
TGGCGGCATTGTACCAAGGCGCTTATGAGGACTTTCAACCGTCGCAGGTA
CCGGACGGGGAGGTTGAGCACATTCGGGAGTTGGCGGAGAGGTACGAGGA
GCAGTTGCAGACTATTTTGAAGCAGTCTCGGGGACGGGAGGGAAAGATGA
CGGGGGCGGGAGGGGCGAGTAAGAAGGCGGCGTTTGACCCCAAGGCATTT
TCGATAGAGCAGAAGGACGGGACTAACTAGTGGGCATATGGGCCAAAAGA
AGAGTTCAAAGGCAGTAGATAGAGTAGTGTGAGTGTGTTTCGGTGCGTAG
TAGGGAATTGAGAAAAAAGAATTAAGAATTAAGAATTAAGAAGAAGAAGA
AAGCGGTTAAAGAAGAAAAAGCAGAAATTGCGCCGGTGATTTTGCGACAT
GGGAGTCTAGAGGAGGTTGTGCTTTTGTTGTTGCCATCATCACTTACACT
AAGCA back to topprotein sequence of NO16G01740.1 >NO16G01740.1-protein ID=NO16G01740.1-protein|Name=NO16G01740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=385bp
MRALRPSGCTLVECGSSTTLIVQRVGRGVLPASAAASSSSSSLPSSSSSK
PRPYPTFNLRSLATMPPYVKKFQTAKTAYASEVAAVRKEYIAQVQERKEA
EQAKQLAETARIKEAKRQRLLVKAAQRKKNMAIFLQAQKEQRERFERYLA
AMQEVREAYTSEVRAKQANLLKALTAESSLWITPENVDEKITDDLFAVAG
RTTFTPTQRSRDWQFMALPRVPDFSAYSEEDLFDEKEDKHFLTDKSPWRA
EEGSSIVIPEGHHFYTPGPAENLPRKLSSSSDSVDEEGVQGEEDNILYFE
DAAYRPSFLAALYQGAYEDFQPSQVPDGEVEHIRELAERYEEQLQTILKQ
SRGREGKMTGAGGASKKAAFDPKAFSIEQKDGTN* back to top
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