NO16G01410, NO16G01410 (gene) Nannochloropsis oceanica

Overview
NameNO16G01410
Unique NameNO16G01410
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1186
Alignment locationchr16:435022..436207 -

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Properties
Property NameValue
DescriptionGlutathione peroxidase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:435022..436207 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004602glutathione peroxidase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006979response to oxidative stress
GO:0055114oxidation-reduction process
GO:0042221response to chemical
GO:0009987cellular process
GO:0008152metabolic process
GO:0006950response to stress
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR000889Glutathione_peroxidase
Homology
[Close]
BLAST of NO16G01410 vs. NCBI_GenBank
Match: CCI50281.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 162.5 bits (410), Expect = 1.500e-36
Identity = 77/164 (46.95%), Postives = 104/164 (63.41%), Query Frame = 0 
Query:   55 AAPRTLYDFSLKDATGTTQSLAAYKDKPVTLIVNVASRCGYTDSNYKQLQTLYEKYQKDGLQIFAMPTNEFGGQEPGSDADIIKFTKDKYAVTFPVFSKLKVNGGDASEIYRWLKSETKDPPAETNKDIRWNFTKFLLVNGMPYKRFAHDKAPKDFESDIVTAL 219
            A  ++ YDF + +  G +  L  Y D PV ++VNVAS CGYTD NYK+LQTLY KY   GL+I A P N+FG QE  ++ +I+ + +++Y VTFP+F K  V G DA   +++L   T+        DI+WNFTKFL+VNG+P KR+     P D ESDI  AL
Sbjct:   16 AEAQSAYDFYVNNVKGESVHLKQYTDSPVWIVVNVASACGYTDQNYKELQTLYTKYHDQGLEILAFPCNQFGSQEAKTNEEILSYVQNQYDVTFPIFEKTFVKGPDAIPFFKFL---TQKQTGFLTNDIKWNFTKFLIVNGVPIKRYGSSTRPLDIESDIKKAL 176
[Close]
BLAST of NO16G01410 vs. NCBI_GenBank
Match: XP_009833763.1 (hypothetical protein, variant 1 [Aphanomyces astaci] >XP_009833764.1 hypothetical protein, variant 2 [Aphanomyces astaci] >XP_009833765.1 hypothetical protein H257_09290 [Aphanomyces astaci] >ETV76851.1 hypothetical protein H257_09290 [Aphanomyces astaci] >ETV76852.1 hypothetical protein, variant 1 [Aphanomyces astaci] >ETV76853.1 hypothetical protein, variant 2 [Aphanomyces astaci])

HSP 1 Score: 160.6 bits (405), Expect = 5.700e-36
Identity = 77/166 (46.39%), Postives = 104/166 (62.65%), Query Frame = 0 
Query:   53 AFAAPRTLYDFSLKDATGTTQSLAAYKDKPVTLIVNVASRCGYTDSNYKQLQTLYEKYQKDGLQIFAMPTNEFGGQEPGSDADIIKFTKDKYAVTFPVFSKLKVNGGDASEIYRWLKSETKDPPAETNKDIRWNFTKFLLVNGMPYKRFAHDKAPKDFESDIVTAL 219
            A AA  ++YDF+LK A G    L+ Y   PV L+VNVAS CG+TD NY+ LQ  Y++Y + G +I A+P+N+FG QEPG+  DI++F    Y V F +F K+ VNG  A  +Y WLKS   D      +DI WNF KF +V+G P+KR AH+      E +I+ AL
Sbjct:   16 AVAASTSIYDFTLKTANGEDYPLSNYDHTPVILVVNVASECGFTDVNYRALQKYYDEYHQYGFEIIAVPSNQFGAQEPGTYDDIVQFATTTYNVEFQIFDKVDVNGPTAHPLYTWLKSNVDD-----GRDIAWNFEKFFVVDGQPWKRIAHNVNLNSLEDEILYAL 176
[Close]
BLAST of NO16G01410 vs. NCBI_GenBank
Match: OQS02466.1 (glutathione peroxidase [Thraustotheca clavata])

HSP 1 Score: 160.6 bits (405), Expect = 5.700e-36
Identity = 79/169 (46.75%), Postives = 108/169 (63.91%), Query Frame = 0 
Query:   58 RTLYDFSLKDATGTTQSLAAYKDKPVTLIVNVASRCGYTDSNYKQLQTLYEKYQKDGLQIFAMPTNEFGGQEPGSDADIIKFTKDKYAVTFPVFSKLKVNGGDASEIYRWLKSETKDPPAETNKDIRWNFTKFLLVNGMPYKRFAHDKAPKDFESDIVTALRAAANKEL 227
            ++  DF +K        L+ Y      L+VNVAS CG+T+SNYK+LQTLY KY + GL+I A P N+FGGQEPGS  +I+ FT+ KY VTFP+F K+ VNG +A  ++++LK+E          DI+WNFTKFL+  G PYKR+A   +P   E  IV  L +  ++EL
Sbjct:   14 KSFLDFVVKGQDNEDVPLSLYSKSKAILVVNVASACGFTNSNYKELQTLYNKYHEKGLEILAFPCNQFGGQEPGSYEEILAFTQ-KYEVTFPIFQKIDVNGDNADPLFKYLKAEL---TGTITNDIKWNFTKFLIAYGNPYKRYATTTSPLGIEKAIVHILDSQNHEEL 178
[Close]
BLAST of NO16G01410 vs. NCBI_GenBank
Match: ETL89227.1 (hypothetical protein L917_11774 [Phytophthora parasitica] >ETM42507.1 hypothetical protein L914_11837 [Phytophthora parasitica] >ETO71198.1 hypothetical protein F444_12381 [Phytophthora parasitica P1976])

HSP 1 Score: 159.8 bits (403), Expect = 9.700e-36
Identity = 82/185 (44.32%), Postives = 112/185 (60.54%), Query Frame = 0 
Query:   62 DFSLKDATGTTQSLAAYKDKPVTLIVNVASRCGYTDSNYKQLQT-------------------------LYEKYQKDGLQIFAMPTNEFGGQEPGSDADIIKFTKDKYAVTFPVFSKLKVNGGDASEIYRWLKSETKDPPAETNKDIRWNFTKFLLVNGMPYKRFAHDKAPKDFESDIVTALRAA 222
            DF++ D  G   S+  +   PV L+VNVAS CGYTD NY++LQ                          LYEKY  +G  +   P N+FGGQEPG+  DI+KFTK+KY VTFP+F+K+ VNG +A  ++++LK  TK     TN DI+WNFTKFL+VN  P+KR+    +P + E+DIV AL ++
Sbjct:   27 DFTIPDLNGRQVSMREFNAFPVILVVNVASECGYTDKNYRELQVRCSRILRSHGSSELKHENTCLFVQELYEKYHDEGFTVLGFPCNQFGGQEPGTAEDILKFTKEKYHVTFPLFAKVDVNGENAHPLFKFLK--TKLDGFVTN-DIKWNFTKFLIVNHEPFKRYGTTTSPSEIENDIVHALHSS 208
[Close]
BLAST of NO16G01410 vs. NCBI_GenBank
Match: ETP12318.1 (hypothetical protein F441_12269 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 159.8 bits (403), Expect = 9.700e-36
Identity = 82/185 (44.32%), Postives = 112/185 (60.54%), Query Frame = 0 
Query:   62 DFSLKDATGTTQSLAAYKDKPVTLIVNVASRCGYTDSNYKQLQT-------------------------LYEKYQKDGLQIFAMPTNEFGGQEPGSDADIIKFTKDKYAVTFPVFSKLKVNGGDASEIYRWLKSETKDPPAETNKDIRWNFTKFLLVNGMPYKRFAHDKAPKDFESDIVTALRAA 222
            DF++ D  G   S+  +   PV L+VNVAS CGYTD NY++LQ                          LYEKY  +G  +   P N+FGGQEPG+  DI+KFTK+KY VTFP+F+K+ VNG +A  ++++LK  TK     TN DI+WNFTKFL+VN  P+KR+    +P + E+DIV AL ++
Sbjct:   28 DFTIPDLNGRQVSMREFNAFPVILVVNVASECGYTDKNYRELQVRCSRILRSHGSSELKHENTCLFVQELYEKYHDEGFTVLGFPCNQFGGQEPGTAEDILKFTKEKYHVTFPLFAKVDVNGENAHPLFKFLK--TKLDGFVTN-DIKWNFTKFLIVNHEPFKRYGTTTSPSEIENDIVHALHSS 209
[Close]
BLAST of NO16G01410 vs. NCBI_GenBank
Match: GAX93891.1 (Hypothetical protein PINS_001755, partial [Pythium insidiosum])

HSP 1 Score: 159.5 bits (402), Expect = 1.300e-35
Identity = 86/190 (45.26%), Postives = 123/190 (64.74%), Query Frame = 0 
Query:   18 TIQQSTMPTHILAAAGPRNMALGFFLLASFTSTACAFAAPRTLYDFSLKDATGTTQSLAAYKDKPVTLIVNVASRCGYTDSNYKQLQTLYEKYQKDGLQIFAMPTNEFGGQEPGSDADIIKFTKDKYAVTFPVFSKLKVNGGDASEIYRWLKSETKDPPAETNKDIRWNFTKFLLVNGMPYKRFAHDKAP 208
            +I+Q+TM T    A     +     L A  ++     A P +L+ F++KDA+G   S+A+++     LIVNVAS CGYTD NYK+LQ LY KY   GL+I A P N+FG QEP S+ +I++F +D+Y V+FPV +K+ VNG DA  ++ +L  +TK P   TN  I+WNFTKFL+V+G+P KR+A   +P
Sbjct:    1 SIKQATMATMARVA-----IVCALSLCAILSAMGNDTAEP-SLWSFTMKDASGKDVSMASFQSSKAILIVNVASACGYTDQNYKELQVLYNKYHTKGLEIIAFPCNQFGHQEPNSEPEILRFVRDQYHVSFPVMAKVDVNGDDALPLFTYL--QTKLPGFVTN-SIKWNFTKFLVVDGVPTKRYATTTSP 181
[Close]
BLAST of NO16G01410 vs. NCBI_GenBank
Match: ETI42604.1 (hypothetical protein F443_12284 [Phytophthora parasitica P1569])

HSP 1 Score: 159.1 bits (401), Expect = 1.600e-35
Identity = 79/185 (42.70%), Postives = 109/185 (58.92%), Query Frame = 0 
Query:   62 DFSLKDATGTTQSLAAYKDKPVTLIVNVASRCGYTDSNYKQLQT-------------------------LYEKYQKDGLQIFAMPTNEFGGQEPGSDADIIKFTKDKYAVTFPVFSKLKVNGGDASEIYRWLKSETKDPPAETNKDIRWNFTKFLLVNGMPYKRFAHDKAPKDFESDIVTALRAA 222
            DF++ D  G   S+  +   PV L+VNVAS CGYTD NY++LQ                          LYEKY  +G  +   P N+FGGQEPG+  DI+KFTK+KY VTFP+F+K+ VNG +A  ++++LK   K        DI+WNFTKFL+VN  P+KR+    +P + E+DIV AL ++
Sbjct:   27 DFTIPDLNGRQVSMREFNAFPVILVVNVASECGYTDKNYRELQVRCSRILRSHGSSELKHENTCLFVQELYEKYHDEGFTVLGFPCNQFGGQEPGTAEDILKFTKEKYHVTFPLFAKVDVNGENAHPLFKFLK---KKLDGFVTNDIKWNFTKFLIVNHEPFKRYGTTTSPSEIENDIVHALHSS 208
[Close]
BLAST of NO16G01410 vs. NCBI_GenBank
Match: ETL36000.1 (hypothetical protein L916_11927 [Phytophthora parasitica])

HSP 1 Score: 159.1 bits (401), Expect = 1.600e-35
Identity = 79/185 (42.70%), Postives = 109/185 (58.92%), Query Frame = 0 
Query:   62 DFSLKDATGTTQSLAAYKDKPVTLIVNVASRCGYTDSNYKQLQT-------------------------LYEKYQKDGLQIFAMPTNEFGGQEPGSDADIIKFTKDKYAVTFPVFSKLKVNGGDASEIYRWLKSETKDPPAETNKDIRWNFTKFLLVNGMPYKRFAHDKAPKDFESDIVTALRAA 222
            DF++ D  G   S+  +   PV L+VNVAS CGYTD NY++LQ                          LYEKY  +G  +   P N+FGGQEPG+  DI+KFTK+KY VTFP+F+K+ VNG +A  ++++LK   K        DI+WNFTKFL+VN  P+KR+    +P + E+DIV AL ++
Sbjct:   28 DFTIPDLNGRQVSMREFNAFPVILVVNVASECGYTDKNYRELQVRCSRILRSHGSSELKHENTCLFVQELYEKYHDEGFTVLGFPCNQFGGQEPGTAEDILKFTKEKYHVTFPLFAKVDVNGENAHPLFKFLK---KKLDGFVTNDIKWNFTKFLIVNHEPFKRYGTTTSPSEIENDIVHALHSS 209
[Close]
BLAST of NO16G01410 vs. NCBI_GenBank
Match: PRW60772.1 (glutathione peroxidase [Chlorella sorokiniana])

HSP 1 Score: 159.1 bits (401), Expect = 1.600e-35
Identity = 82/174 (47.13%), Postives = 119/174 (68.39%), Query Frame = 0 
Query:   55 AAPRTLYD--FSLKDATGTTQSLAAYKDKPVTLIVNVASRCGYTDSNYKQLQTLYEKYQKDGLQIFAMPTNEFGGQEPGSDADIIKFTKDKYAVTFPVFSKLKVNGGDASEIYRWLKSETKDPPAETNKDIRWNFTKFLL-VNGMPYKRFAHDKAPKDFESDIVTALRAAANKE 226
            AA  +L+D  F+  D  G+ + L+ Y+ K V L+VNVAS+CG+TDSNY+ LQ LY KY++ GL++ A P N+FG QEPGS+A+I +F K +Y  +FP+F+K+ VNG  A+ ++ WLK+ T    A+  +D+ WNF KFLL  NG P+KR+A D AP   E+D+   L   A++E
Sbjct:   25 AAGPSLFDQNFTATDIGGSPRQLSDYRGK-VLLVVNVASKCGFTDSNYQGLQQLYSKYREQGLEVLAFPCNQFGQQEPGSNAEIAQFAKSQYGASFPLFAKVDVNGAGAAPLFSWLKANTLGEDAK--RDLGWNFVKFLLDRNGRPFKRYAWDFAPA-LEADVQRLLAEPASEE 194
[Close]
BLAST of NO16G01410 vs. NCBI_GenBank
Match: XP_008868722.1 (hypothetical protein H310_05709 [Aphanomyces invadans] >ETW02117.1 hypothetical protein H310_05709 [Aphanomyces invadans])

HSP 1 Score: 158.3 bits (399), Expect = 2.800e-35
Identity = 76/171 (44.44%), Postives = 107/171 (62.57%), Query Frame = 0 
Query:   53 AFAAPRTLYDFSLKDATGTTQSLAAYKDKPVTLIVNVASRCGYTDSNYKQLQTLYEKYQKDGLQIFAMPTNEFGGQEPGSDADIIKFTKDKYAVTFPVFSKLKVNGGDASEIYRWLKSETKDPPAETNKDIRWNFTKFLLVNGMPYKRFAHDKAPKDFESDIVTALRAAAN 224
            A A   ++YDF+LK A G    L+ Y   PV L+VNVAS CG+TD NY+ LQ  Y++Y + G +I A+P+N+FG QEPG+  DI++F K  Y V F +F K+ VNG +A  +Y WLK+     P +  +D+ WNF KFL+V+G P+ R AH+      E  I+ AL   A+
Sbjct:   15 AMAMATSIYDFTLKTANGEDYPLSNYDHTPVILVVNVASECGFTDINYRALQKYYDEYHQFGFEIVAVPSNQFGAQEPGTYDDIVQFAKTNYNVGFRIFDKVDVNGPNAHPLYTWLKANV---PDDDGRDVAWNFEKFLVVDGKPWNRVAHNVNLDKVEDKILYALAHEAD 182
The following BLAST results are available for this feature:
BLAST of NO16G01410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CCI50281.11.500e-3646.95unnamed protein product [Albugo candida][more]
XP_009833763.15.700e-3646.39hypothetical protein, variant 1 [Aphanomyces astac... [more]
OQS02466.15.700e-3646.75glutathione peroxidase [Thraustotheca clavata][more]
ETL89227.19.700e-3644.32hypothetical protein L917_11774 [Phytophthora para... [more]
ETP12318.19.700e-3644.32hypothetical protein F441_12269 [Phytophthora para... [more]
GAX93891.11.300e-3545.26Hypothetical protein PINS_001755, partial [Pythium... [more]
ETI42604.11.600e-3542.70hypothetical protein F443_12284 [Phytophthora para... [more]
ETL36000.11.600e-3542.70hypothetical protein L916_11927 [Phytophthora para... [more]
PRW60772.11.600e-3547.13glutathione peroxidase [Chlorella sorokiniana][more]
XP_008868722.12.800e-3544.44hypothetical protein H310_05709 [Aphanomyces invad... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003130NSK003130Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G01410.1NO16G01410.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593505gene_6023Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100027g13gene6485Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G01410.1NO16G01410.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G01410 ID=NO16G01410|Name=NO16G01410|organism=Nannochloropsis oceanica|type=gene|length=1186bp
GAATTGTTTCGCCAAAAAAAACACGGAGCAAGTTTGTTTGCATGTCCATC
TCGTGCGTCATTACACACCACCTACGTATACAGCTCGCTACAACCATCCA
ACAAAGCACTATGCCGACTCACATCCTCGCTGCTGCCGGGCCCCGCAACA
TGGCCTTGGGATTCTTCCTTCTGGCCTCGTTCACTTCGACGGCCTGTGCG
TTCGCCGCTCCTCGTACTCTCTACGATTTTTCGCTCAAGGATGCCACGGG
CACGACGCAGAGCCTCGCCGCCTACAAAGACAAGCCTGTCACGCTGATgt
aagtctcaagtcgctggtcgggcccttgggtttggtattggaaggtgcca
cttgtcaccttcacacccgcgtctctccctttctctttcatccgaaaaaa
cttcagCGTGAACGTGGCATCTCGTTGCGGATATACCGACAGTAATTACA
AGCAGCTCCAAACTCTTTATGAAAAGTACCAGAAGGATGGCTTGCAGATC
TTTGCCATGCCCACCAACGAATTTGGAGGACAGGAGCCGGGCTCTGATGC
TGACATCATCAAGTTCACAAAGGACAAATACGCCGTTACGTTTCCCGTGT
TTAGCAAGCTCAAGGTGAATGGTGGTGATGCTTCAGAGATCTACCGCTGG
CTTAAGTCTGAAACGAAGGACCCGCCTGCTGAAACCAATAAAGATATCCG
GTGGAATTTTACCAAGgttcgtttattgcaccacttttgttgtgcctgcg
tctgagtcagttttttagcttggtaattacgcgacgccatccctttcctg
agaataagctgtggtctagagtcaatgtgatggatatctggtttttgtcc
tttccaaggttaaaccccatggtagaaaaatgctgattggagcactttca
cgtaccttctcacactcacatgacagTTTTTGCTCGTTAACGGCATGCCC
TACAAGCGTTTTGCCCACGATAAGGCCCCGAAGGATTTTGAATCTGACAT
CGTAACCGCTTTGCGCGCAGCTGCGAATAAGGAGCTATAAGAGAGCATTA
GTACGTGAGAGAACGGAGAGGTGTAGACCTCTAGTGGCGCGCAGGAAGCG
AGACCGAGTGACTGAAAGTCTCTCTCCTCGATGGCGGTGGAAAAAGAAAC
AGACGTGACATGATTGAAAGCAACTTAGTCAACAGT
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protein sequence of NO16G01410.1

>NO16G01410.1-protein ID=NO16G01410.1-protein|Name=NO16G01410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=227bp
MSISCVITHHLRIQLATTIQQSTMPTHILAAAGPRNMALGFFLLASFTST
ACAFAAPRTLYDFSLKDATGTTQSLAAYKDKPVTLIVNVASRCGYTDSNY
KQLQTLYEKYQKDGLQIFAMPTNEFGGQEPGSDADIIKFTKDKYAVTFPV
FSKLKVNGGDASEIYRWLKSETKDPPAETNKDIRWNFTKFLLVNGMPYKR
FAHDKAPKDFESDIVTALRAAANKEL*
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Synonyms
Publications