NO16G01310, NO16G01310 (gene) Nannochloropsis oceanica

Overview
NameNO16G01310
Unique NameNO16G01310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2357
Alignment locationchr16:402185..404541 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:402185..404541 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO16G01310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003120NSK003120Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G01310.1NO16G01310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G01310.1NO16G01310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G01310 ID=NO16G01310|Name=NO16G01310|organism=Nannochloropsis oceanica|type=gene|length=2357bp
ATGGAAAAGgtgagaagtattagggtgggtgatggatgggtgtgagggaa
gaggtcggtgttggcgaactttctcttctttcgctaccgatttgctgcta
ccccggcattatttcctagggagtattggaatgctcccgatgtcgtagtt
gaatttgttgcgcatttctaatgctttccttgcctccgcgccacccctag
CCGTCCGTCCTTATAGAACCCACCCCAAGCTTCATCAACAATCGCCAAGG
CCCCGAGCAACGGCCACGCCCTACCATGACTGCGCCCAACCCCAAGAACC
AGGCCATCGAGCTCGCCATCCAATGCCATGCAGCCTCGTATTTCAAGACC
GCAAAGGGCTCAGTGGATAATCAGATGAACTGGCTCCAGCTTGCAAGCAC
TCTTTACGCCAATGCCTCGCGTGAGCTCCGTGATATGCACCCTTGCACAA
AGCTCTCCCTCGCCTTATTTGTGGTAGCCACCGGTGCAATGGACAAGGCC
TTGGAAGCCGTGGTATTGCTTCGGGATTGGAAAGTGACCAAGGGTCCTTG
GGCGAGCTTCAATCTAAACCTGATAGCCCAAGCCACCCTCCATGAAGTCC
GCCAAGCTATTGAAGAGGCCGAGCAAGACCAAGACGCCTCGGTCTTCGAC
CGGCAGCAAAAAATCGCCCCCCATGTCCTCAAAGAAAAGCTCGAAGCCGG
GATGAAAAACATCCTTGAACCGCAGCTTGATCAATGCACTCCTCTAGTTC
GCTCCTGGCTCTTAGGTCTCCAGGAGGAACTTCGGCACACGGCAACCCAA
GCAGTTGCCTTGAAGAAGGTCTCAGTCATTCCCTCCTTGTTAAAAGCACA
TGACTTAAATCGATTGCAGAATCCCTTTGTCACATGGGTCTTGGCGCTAT
TGGCAGAGTTTGGGGCGCCACCTGTGAGGAGGGCCTTGAGGGAGGTCGGT
TTTGGTGGGGAGGAAGGGATGGAGGAACTGATGGAGCGGGAAGTGTCGGT
AGAGAGAGATGAGGGGAGAAAGCAGGAGAAGCGCTGGCGAGAGCATCGAG
TGGAGGAGATGAAAGACGAAGTGGATGTGGAAGAGGAGGAAGCTGTAACG
CTGACGAAAAAGCAGCAGCAGCAGCAGCAGCAGCGGGGGCAGAAAGACAA
GAGCAAGGAGGAGGATGAGGATGAGGAGGAGGAGGAAGGGGTGGCAGGAG
GAGAAGAGCATAGAGGGGCTAATTCTAATAAGAGGGGAAAGACTGCGAGA
AAATCACAGGATCAGCTGCGACAGGAGAGAAAGAGGAAGGATAAAAAAGT
GTCTCCGTCCACGAAGTACAGCGCTCGTGCAGCGATGGCTGCCGAGGATG
AAGAGAAGGAGGAGGAGCAGCAGCAGCAGCCGGATAGTCCCCTGGCGGCA
ATGGCTCTGTCCACATCTACCATCAATCTTCGTACCCGAAGACAAACTTC
AGAAGTAGAGGCAGGTCCGTTGGAGGTGGGAGACGCCGTGTACGTCCAAT
CCAGGTTTTTAGTTGTCCCACGCGCGGTGGTAACGGCAGTGGTGGAACCG
GGAAAGTTGGAGAGGAAGTATGTAGCGGAAGAGAAGATAGAAGAGAGGAC
ATTTGACGTGATGTACGAAGAGGAAGGGGATGGGGTGGAGAAGGTAGCAA
AGATGCTGCCTCGGCAATATCTGACGCTGTTGGAAAAGGGCGCTGGATTA
CTCGTGCCTTCCCCCTCCCCCACGCTCCAGCGGCGACAACAGCAACAGTA
CCAGCAGCGTTTGAAGGATGTGAATGCCTCGAAAAAGTACAGTGCACGGG
TGGCCATGGCTGCGGAGGAAGTGGAAGAGGCGGACGAGCAGGGGCAGGAG
CAGGAGTTGCAGAAAGGGAGAAAGAGGATCAAGATTGCTGCGACTACTAC
GCAAGAGGAGCAGGGGAAGGAAGAGGAAGAGGGTGGGGAGAAGGACACCT
CACCCAAGCGTAGCGCTCGAGAGTTTTGGACGGAGCCTCAGACACAAGAA
CCCATGACGCAATTTCCGGAGGGCGAGGAGGAACAGGAAGGTGGGGGAGA
ATGTGAGACGGAGGACCAAGAAAACCAGGACAGTAACGGACGCAAGGAGG
AGGGGGGAGAGGAAGCACAAGGGGGGGGAAAAGGGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGCAATCGGGGAAGATGGAAGAGATTG
AAAGCGTGAGCTCCGATACACGGGGTAGGGGGTCGTGGATCTCGCCGTTG
CAGGCCCCGTTCGGAATGCTGAGGCGCGTGCTGGTGGGTGGAAAGACACA
GACTTAG
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protein sequence of NO16G01310.1

>NO16G01310.1-protein ID=NO16G01310.1-protein|Name=NO16G01310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=722bp
MEKPSVLIEPTPSFINNRQGPEQRPRPTMTAPNPKNQAIELAIQCHAASY
FKTAKGSVDNQMNWLQLASTLYANASRELRDMHPCTKLSLALFVVATGAM
DKALEAVVLLRDWKVTKGPWASFNLNLIAQATLHEVRQAIEEAEQDQDAS
VFDRQQKIAPHVLKEKLEAGMKNILEPQLDQCTPLVRSWLLGLQEELRHT
ATQAVALKKVSVIPSLLKAHDLNRLQNPFVTWVLALLAEFGAPPVRRALR
EVGFGGEEGMEELMEREVSVERDEGRKQEKRWREHRVEEMKDEVDVEEEE
AVTLTKKQQQQQQQRGQKDKSKEEDEDEEEEEGVAGGEEHRGANSNKRGK
TARKSQDQLRQERKRKDKKVSPSTKYSARAAMAAEDEEKEEEQQQQPDSP
LAAMALSTSTINLRTRRQTSEVEAGPLEVGDAVYVQSRFLVVPRAVVTAV
VEPGKLERKYVAEEKIEERTFDVMYEEEGDGVEKVAKMLPRQYLTLLEKG
AGLLVPSPSPTLQRRQQQQYQQRLKDVNASKKYSARVAMAAEEVEEADEQ
GQEQELQKGRKRIKIAATTTQEEQGKEEEEGGEKDTSPKRSAREFWTEPQ
TQEPMTQFPEGEEEQEGGGECETEDQENQDSNGRKEEGGEEAQGGGKGEE
EEEEEEEEEEEEEEEEEEEEEEEEEEEEQSGKMEEIESVSSDTRGRGSWI
SPLQAPFGMLRRVLVGGKTQT*
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Synonyms
Publications