NO16G01270, NO16G01270 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G01270 vs. NCBI_GenBank
Match: EWM24032.1 (Casein kinase II, regulatory subunit, alpha-helical [Nannochloropsis gaditana]) HSP 1 Score: 349.0 bits (894), Expect = 3.100e-92 Identity = 160/189 (84.66%), Postives = 177/189 (93.65%), Query Frame = 0
Query: 292 YVNLKGNEFLCEVDEEYIQDDFNLTGLSSLVPYYDYALDVVSDVELPIESMTEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKFQASHFGRCPRVFCGMQPVLPVGQADHPRVSTVNVYCPKCQDIFLPRSTRHAVMDGAYFGTTFAHLFLLTHPESIPTRPEQAYVPRIYGFKINAESVYFSRA 481
YV+LKGNEF+CEVDEEYIQDDFNLTGLSSLVPYYDYALD+V DVELPIESMTEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEK+++S FGRCPR CG QPVLP+G ADHPRVSTVNV+CP+C+D+F+PRSTRHA MDGAYFGTTFAHLFLLTHPE+IP EQ+YVPRIYGFKINA+S Y++ A
Sbjct: 299 YVSLKGNEFMCEVDEEYIQDDFNLTGLSSLVPYYDYALDMVLDVELPIESMTEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKYKSSLFGRCPRFLCGTQPVLPIGLADHPRVSTVNVFCPRCRDVFVPRSTRHAAMDGAYFGTTFAHLFLLTHPEAIPPAVEQSYVPRIYGFKINADSTYYTAA 487
BLAST of NO16G01270 vs. NCBI_GenBank
Match: OEU09629.1 (casein kinase 2 beta chain, CK2B [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 302.8 bits (774), Expect = 2.600e-78 Identity = 133/192 (69.27%), Postives = 167/192 (86.98%), Query Frame = 0
Query: 287 SWVNWYVNLKGNEFLCEVDEEYIQDDFNLTGLSSLVPYYDYALDVVSDVELPIE-SMTEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKFQASHFGRCPRVFCGMQPVLPVGQADHPRVSTVNVYCPKCQDIFLPRSTRHAVMDGAYFGTTFAHLFLLTHPESIPTRPEQAYVPRIYGFKINAESVYF 478
SW+ W+ +L+GNEF CEVDE+YIQDDFNLTGLSSLVPYY+YALD+V DVE+P+E S+TEEQ E+VE AAEMLYGLIHARYI+T+RG+HAM EK++A+ FGRCPRVFC QPVLPVG +D PR TVNV+CP+C +F P+STR A +DGAYFGTTF HL+L+THP+ IPT+P+Q YVPR+YGFK++ S+++
Sbjct: 9 SWITWFCSLRGNEFFCEVDEDYIQDDFNLTGLSSLVPYYEYALDMVLDVEMPMEDSLTEEQQEIVESAAEMLYGLIHARYIVTNRGMHAMYEKYRAAAFGRCPRVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMTHPDMIPTKPQQTYVPRVYGFKVHKTSLFY 200
BLAST of NO16G01270 vs. NCBI_GenBank
Match: XP_002294625.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED87985.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 295.4 bits (755), Expect = 4.100e-76 Identity = 132/186 (70.97%), Postives = 158/186 (84.95%), Query Frame = 0
Query: 287 SWVNWYVNLKGNEFLCEVDEEYIQDDFNLTGLSSLVPYYDYALDVVSDVELPIE-SMTEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKFQASHFGRCPRVFCGMQPVLPVGQADHPRVSTVNVYCPKCQDIFLPRSTRHAVMDGAYFGTTFAHLFLLTHPESIPTRPEQAYVPRIYGFKIN 472
SW+ W+ L+GNEF CEVDE+YIQDDFNLTGL+ LVPYYDYALD+V DVE+P+E S+TEEQ E+VE AAEMLYGLIHARYI+T+RG+HAM EK++++ FGRCP VFC QPVLPVG +D PR TVNV+CP+C +F P+STR A +DGAYFGTTF HL+L+THPE IP RP Q YVPR+YGFKIN
Sbjct: 21 SWIAWFCGLRGNEFFCEVDEDYIQDDFNLTGLNGLVPYYDYALDMVLDVEMPMEDSLTEEQQEIVESAAEMLYGLIHARYIVTNRGMHAMYEKYRSASFGRCPHVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMTHPEMIPVRPSQQYVPRVYGFKIN 206
BLAST of NO16G01270 vs. NCBI_GenBank
Match: CBN77572.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 288.9 bits (738), Expect = 3.800e-74 Identity = 132/191 (69.11%), Postives = 158/191 (82.72%), Query Frame = 0
Query: 287 SWVNWYVNLKGNEFLCEVDEEYIQDDFNLTGLSSLVPYYDYALDVVSDVELPI-ESMTEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKFQASHFGRCPRVFCGMQPVLPVGQADHPRVSTVNVYCPKCQDIFLPRSTRHAVMDGAYFGTTFAHLFLLTHPESIPTRPEQAYVPRIYGFKINAESVY 477
+W++W+V L+GNEF CEVDE+YIQDDFNLTGLS++VPYY+YALD++ DVE+P +++TEEQ E+VE AAE+LYGLIHARYILTSRG+ M +KFQ FGRCPRV+C Q VLP G +D PR TV VYCPKCQDIF P+STR A +DGAYFGTTF+HLFLL HPE IP+RP QAY RIYGFKI+ S Y
Sbjct: 116 TWISWFVTLRGNEFFCEVDEDYIQDDFNLTGLSTMVPYYEYALDMILDVEMPAGQTLTEEQQEVVESAAEILYGLIHARYILTSRGMQGMFDKFQVGAFGRCPRVYCQGQNVLPAGLSDVPRNCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFSHLFLLAHPELIPSRPSQAYCSRIYGFKIHQTSAY 306
BLAST of NO16G01270 vs. NCBI_GenBank
Match: XP_009039825.1 (hypothetical protein AURANDRAFT_54649 [Aureococcus anophagefferens] >EGB05443.1 hypothetical protein AURANDRAFT_54649 [Aureococcus anophagefferens]) HSP 1 Score: 284.6 bits (727), Expect = 7.200e-73 Identity = 130/195 (66.67%), Postives = 161/195 (82.56%), Query Frame = 0
Query: 287 SWVNWYVNLKGNEFLCEVDEEYIQDDFNLTGLSSLVPYYDYALDVVSDVELPI-ESMTEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKFQASHFGRCPRVFCGMQPVLPVGQADHPRVSTVNVYCPKCQDIFLPRSTRHAVMDGAYFGTTFAHLFLLTHPESIPTRPEQAYVPRIYGFKINAESVYFSRA 481
SW+ W+++L+GNEF CEVDEEYIQDDFNLTGLSSLVPYYDYALD++ DVE+ I ES+TEEQ ELVE AAEMLYGLIHARY++T+RG+ AM EK+ ++ FGRCPR FC QP LPVG++D PR TV+V+CP C+DIF PRS+R A +DGAYFGTTF HLFL+T PE IP Q++VPR++GF+I+ S Y + A
Sbjct: 48 SWIAWFLSLRGNEFFCEVDEEYIQDDFNLTGLSSLVPYYDYALDMILDVEMAIEESLTEEQQELVESAAEMLYGLIHARYVITNRGMQAMYEKYASASFGRCPRAFCCGQPALPVGRSDLPRNYTVHVFCPMCRDIFTPRSSRSASIDGAYFGTTFPHLFLMTFPELIPQHGVQSFVPRVFGFRIHKASPYHTTA 242
BLAST of NO16G01270 vs. NCBI_GenBank
Match: OQR94342.1 (casein kinase II subunit beta [Achlya hypogyna]) HSP 1 Score: 283.1 bits (723), Expect = 2.100e-72 Identity = 125/192 (65.10%), Postives = 159/192 (82.81%), Query Frame = 0
Query: 287 SWVNWYVNLKGNEFLCEVDEEYIQDDFNLTGLSSLVPYYDYALDVVSDVELPI-ESMTEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKFQASHFGRCPRVFCGMQPVLPVGQADHPRVSTVNVYCPKCQDIFLPRSTRHAVMDGAYFGTTFAHLFLLTHPESIPTRPEQAYVPRIYGFKINAESVYF 478
SW++W+ +L+GNEF CE+DEEYI DDFN+TGLSS+VPYYDYA+D++ DVE P+ ES+T+ Q E+VE AAEMLYGLIHARYI+T+RG+ AM EK+Q FGRC RV C QPVLPVGQ+D PR +TVN++CP+C+D+F P+S R +DG+YFGTTF HLFLLTHP +P+ P Q YVPRI+G+KINA S Y+
Sbjct: 82 SWISWFCSLRGNEFFCEIDEEYIIDDFNMTGLSSIVPYYDYAMDMILDVETPLEESLTDIQQEMVESAAEMLYGLIHARYIVTTRGMAAMLEKYQNVDFGRCHRVHCQGQPVLPVGQSDVPRHTTVNIFCPRCRDVFFPKSQRQGNIDGSYFGTTFPHLFLLTHPSLVPSPPAQVYVPRIFGYKINAASEYY 273
BLAST of NO16G01270 vs. NCBI_GenBank
Match: XP_002178765.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC49463.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 282.3 bits (721), Expect = 3.600e-72 Identity = 123/186 (66.13%), Postives = 156/186 (83.87%), Query Frame = 0
Query: 287 SWVNWYVNLKGNEFLCEVDEEYIQDDFNLTGLSSLVPYYDYALDVVSDVELPIE-SMTEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKFQASHFGRCPRVFCGMQPVLPVGQADHPRVSTVNVYCPKCQDIFLPRSTRHAVMDGAYFGTTFAHLFLLTHPESIPTRPEQAYVPRIYGFKIN 472
SW+ W+ +L+GNEF CEVDE+YIQDDFNLTGL+ +VPYY+YALD+V DVE+P+E S+TE Q E+VE AAEMLYGLIHARYI+T+RG+H M EK++ + FGRCP VFC QPVLPVG +D PR TVNV+CP+C +F P+STR A +DGAYFGTTF HL+L+THP+ IPT+P Q Y PR+YGF+++
Sbjct: 19 SWITWFCSLRGNEFFCEVDEDYIQDDFNLTGLALVVPYYEYALDMVLDVEMPMEDSLTEAQQEIVESAAEMLYGLIHARYIVTNRGMHGMYEKYRTAAFGRCPHVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMTHPDMIPTKPTQEYCPRVYGFRVH 204
BLAST of NO16G01270 vs. NCBI_GenBank
Match: GAQ81209.1 (casein kinase II subunit beta [Klebsormidium nitens]) HSP 1 Score: 275.4 bits (703), Expect = 4.400e-70 Identity = 124/189 (65.61%), Postives = 153/189 (80.95%), Query Frame = 0
Query: 287 SWVNWYVNLKGNEFLCEVDEEYIQDDFNLTGLSSLVPYYDYALDVVSDVELPIESM-TEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKFQASHFGRCPRVFCGMQPVLPVGQADHPRVSTVNVYCPKCQDIFLPRSTRHAVMDGAYFGTTFAHLFLLTHPESIPTRPEQAYVPRIYGFKINAES 475
SW+ W+ +LKGNEF CEVD+EYIQDDFNL+GLSS VPYYDYALD++ DVE P + M TEEQHE+VE AAEMLYGLIH RYILT+RG+ AM EK++ FGRCPRV+C QP LP+GQ+D PR STV +YCPKC+DI+ PRS +DGAYFGTTF HLFL+T+ P +P Q+YVPRI+GFK+++ +
Sbjct: 98 SWIAWFCSLKGNEFFCEVDDEYIQDDFNLSGLSSQVPYYDYALDLILDVESPNDDMLTEEQHEMVESAAEMLYGLIHVRYILTTRGMSAMLEKYKNVDFGRCPRVYCSGQPCLPMGQSDIPRTSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYSYIKPPKPTQSYVPRIFGFKLHSSA 286
BLAST of NO16G01270 vs. NCBI_GenBank
Match: XP_024376916.1 (casein kinase II subunit beta-3-like isoform X1 [Physcomitrella patens] >XP_024376917.1 casein kinase II subunit beta-3-like isoform X1 [Physcomitrella patens] >XP_024376918.1 casein kinase II subunit beta-3-like isoform X1 [Physcomitrella patens] >XP_024376919.1 casein kinase II subunit beta-3-like isoform X1 [Physcomitrella patens] >XP_024376920.1 casein kinase II subunit beta-3-like isoform X1 [Physcomitrella patens] >XP_024376921.1 casein kinase II subunit beta-3-like isoform X1 [Physcomitrella patens] >PNR54013.1 hypothetical protein PHYPA_007689 [Physcomitrella patens]) HSP 1 Score: 273.5 bits (698), Expect = 1.700e-69 Identity = 123/186 (66.13%), Postives = 152/186 (81.72%), Query Frame = 0
Query: 287 SWVNWYVNLKGNEFLCEVDEEYIQDDFNLTGLSSLVPYYDYALDVVSDVELPIESM-TEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKFQASHFGRCPRVFCGMQPVLPVGQADHPRVSTVNVYCPKCQDIFLPRSTRHAVMDGAYFGTTFAHLFLLTHPESIPTRPEQAYVPRIYGFKIN 472
SW++W+ L+GNEF CEVD+EYIQDDFNL+GLSS VPYYDYALD++ DVE P + M TEEQ+ELVE AAEMLYGLIH RYILTS+G++AM EK + FGRCPRV+C QP LP+GQ+D PR STV +YCPKC+DI+ PRS +DGAYFGTTF HLFL+T+P P++P Q+Y PRI+GFK++
Sbjct: 110 SWISWFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYDYALDLILDVESPSDDMLTEEQNELVESAAEMLYGLIHVRYILTSKGMNAMLEKCKNVDFGRCPRVYCSGQPCLPMGQSDVPRTSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYPYIKPSKPTQSYTPRIFGFKLH 295
BLAST of NO16G01270 vs. NCBI_GenBank
Match: XP_024376922.1 (casein kinase II subunit beta-1-like isoform X2 [Physcomitrella patens] >XP_024376923.1 casein kinase II subunit beta-1-like isoform X2 [Physcomitrella patens]) HSP 1 Score: 273.5 bits (698), Expect = 1.700e-69 Identity = 123/186 (66.13%), Postives = 152/186 (81.72%), Query Frame = 0
Query: 287 SWVNWYVNLKGNEFLCEVDEEYIQDDFNLTGLSSLVPYYDYALDVVSDVELPIESM-TEEQHELVEGAAEMLYGLIHARYILTSRGLHAMNEKFQASHFGRCPRVFCGMQPVLPVGQADHPRVSTVNVYCPKCQDIFLPRSTRHAVMDGAYFGTTFAHLFLLTHPESIPTRPEQAYVPRIYGFKIN 472
SW++W+ L+GNEF CEVD+EYIQDDFNL+GLSS VPYYDYALD++ DVE P + M TEEQ+ELVE AAEMLYGLIH RYILTS+G++AM EK + FGRCPRV+C QP LP+GQ+D PR STV +YCPKC+DI+ PRS +DGAYFGTTF HLFL+T+P P++P Q+Y PRI+GFK++
Sbjct: 107 SWISWFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYDYALDLILDVESPSDDMLTEEQNELVESAAEMLYGLIHVRYILTSKGMNAMLEKCKNVDFGRCPRVYCSGQPCLPMGQSDVPRTSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYPYIKPSKPTQSYTPRIFGFKLH 292 The following BLAST results are available for this feature:
BLAST of NO16G01270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G01270 ID=NO16G01270|Name=NO16G01270|organism=Nannochloropsis oceanica|type=gene|length=2417bpback to top protein sequence of NO16G01270.2 >NO16G01270.2-protein ID=NO16G01270.2-protein|Name=NO16G01270.2|organism=Nannochloropsis oceanica|type=polypeptide|length=627bpback to top protein sequence of NO16G01270.1 >NO16G01270.1-protein ID=NO16G01270.1-protein|Name=NO16G01270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=824bpback to top Synonyms
Publications
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