NO16G01170, NO16G01170 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO16G01170
Unique Name	NO16G01170
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1681
Alignment location	chr16:365982..367662 -

Link to JBrowse

Properties


Property Name	Value
Description	Trna (Guanine-n7-)-methyltransferase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr16	genome	chr16:365982..367662 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0036265	RNA (guanine-N7)-methylation
GO:0036265	RNA (guanine-N7)-methylation
GO:0032259	methylation

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0016740	transferase activity
GO:0008168	methyltransferase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR011044	Quino_amine_DH_bsu
IPR017986	WD40_repeat_dom
IPR028884	Trm82
IPR001680	WD40_repeat

Homology

[Close]

BLAST of NO16G01170 vs. NCBI_GenBank
Match: EWM23997.1 (trna (guanine-n7-)-methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 441.4 bits (1134), Expect = 3.400e-120
Identity = 247/433 (57.04%), Postives = 301/433 (69.52%), Query Frame = 0

Query:    1 MRDKLLVS---SSSSGKLLCAYAGEQVYLIDTASQSSSKIIALPAPSQPAGKADASAPPITALGQVEAVALTADGNKAAALYRHKVLALWDIRDSTAPALLAHRLLPKKAFSLLFAQLEV--------PGNVQKEDTILVNDKVGDVRAYFATTELLSKSSAFLLGHTASVGTCLDLSPDGTCLASGDRDEKVRLSKFPCTLMIDAYLTGHDNFISSVTFIRRGTAVLTGSGDGTLALWDAQTGAEKVKRVLPFTLKVKNETXXXXXXXXXXXXXXXXXXXXATTVPCAVAINREESLAIVTLLGSAELLVYSLPALELVQTLKLPSPPLGAVWLEKGGQ-EGGKEEVLYVTVGAPEYLMAYVLIGN------ELQAQIEEHSVVVAVRSFGMKAGLESELTVDEGDEGFLGGMTKENLEVRFEWNSRQRKEE 416
            MRDKLLV+   S  +G LLCAYAGE V+LIDT  +    ++ALP P   A   D +      LGQVEA+ALT +G +AAALYRHKVLALWD  DS +P LL+HRLLPKKAF+LLFA+L+         PG   +ED +LVNDKVGDVR Y AT E+L K+SAFLLGHTASVGTCLDLSPDG  LA+GDRDEKVR+S FPCT++I+ YL GH+ F+SSV F+  G  VLTGSGD TLALWDA TG E V+  LP  L+ +                       +T VPCAVA+  + +LA VTLLG ++LLVY+LPAL L+QTL LPS P+GA +++   + EG    VLYVTVGAPEYL+AY +  +       L+A  E   V+V+VR FG+K GL++ LTVDEGDE FLGGMTKENL VR +WNSRQR+EE
Sbjct:    1 MRDKLLVAAKCSGGAGILLCAYAGEDVFLIDT--KQPGNVVALPVPDLSAASVDGTESNADGLGQVEALALTGNGRRAAALYRHKVLALWDTSDSASPVLLSHRLLPKKAFALLFARLDSPSGDQDLGPGTGHQEDVVLVNDKVGDVRMYRATAEMLPKTSAFLLGHTASVGTCLDLSPDGARLATGDRDEKVRISHFPCTVVIETYLLGHERFVSSVNFVENGAKVLTGSGDQTLALWDAHTGCEVVRESLP-PLEGELVAEGEQLGPENGERGRNSSKSPSTIVPCAVAVTSDSALAAVTLLGQSKLLVYALPALSLIQTLDLPSVPVGAAFMDNPEEAEGEVRRVLYVTVGAPEYLLAYRVTKDGEGGAWRLEAAEEGTGVLVSVRLFGLKMGLKASLTVDEGDEDFLGGMTKENLTVRCDWNSRQRREE 430

[Close]

BLAST of NO16G01170 vs. NCBI_GenBank
Match: CBN79278.1 (tRNA (guanine-n(7)-)-methyltransferase complex subunit, putative [Ectocarpus siliculosus])

HSP 1 Score: 94.4 bits (233), Expect = 1.000e-15
Identity = 66/187 (35.29%), Postives = 96/187 (51.34%), Query Frame = 0

Query:   58 TALGQVEAVALTADGNKAAALYRHKVLALWDIRDSTAPALLAHRLLPKKAFSLLFAQLEVP-------GNVQKEDTILVNDKVGDVRAYFATTELLSKSSAFLLGHTASVGTCLDLSPDGTCLASGDRDEKVRLSKFPCTLMIDAYLTGHDNFISSVTFI--RRGTAVLTGSGDGTLALWDAQTGAE 236
            TA G   A A   D +KA         A  +   + +  +L  R LPKK  S+LFA +  P          + E+ ++V+DK GD  AY A     S +   LLGHTA   T +     G  LA+ DR E +R+S+FP T ++  YL GH +F+S++  +    GT +L+G GDG + LW+A+ G E
Sbjct:   22 TAAGTTGAPADPGDASKAT-----MEAAPAEAAAAASGHVLGKRELPKKPTSVLFAPVVAPRADGAAATREKTEEVVVVSDKCGD--AYAAPLPDPSSALKHLLGHTAMTITAMVTLKRGQLLATADRAEHIRVSQFPRTTIVHTYLLGHQDFVSALAAVPGEGGTMLLSGGGDGRVGLWEAEAGRE 201

[Close]

BLAST of NO16G01170 vs. NCBI_GenBank
Match: KIR68090.1 (tRNA (guanine-N(7)-)-methyltransferase subunit TRM82 [Cryptococcus gattii CA1873])

HSP 1 Score: 88.2 bits (217), Expect = 7.300e-14
Identity = 63/207 (30.43%), Postives = 100/207 (48.31%), Query Frame = 0

Query:   46 PAGKADASAPPITALGQVEAVALTADGNKAAALYRHKVLALWDIRDSTAPALLAHRLLPKKAFSLLFAQLEVPGNVQKEDTILVNDKVGDVRAY------------------FATTELLSKSSAFLLGHTASVGTCLDLSPDGTCLASGDRDEKVRLSKFPCTLMIDAYLTGHDNFISSVTF-IRRGTAVLTGSGDGTLALWDAQTG 234
            P+    AS+P     G +  +A+  DG  AA L   K LA+WDI+      L   R + KK   L F+         K+ +I++ DKVGDV AY                         +  + +LLGH + +   + ++PDG  + + DRDE +R+S++P   +ID YL GHD F+S++       + +L+  GD +L +W+  TG
Sbjct:   30 PSTSTFASSPADGKAGLIRLLAVREDGEVAATLGEDKQLAVWDIQHDRL-KLRHTRTVVKKGSCLSFS---------KDGSIILTDKVGDVYAYPLDPVPVDSSAERPPMYTLVADPSQNPDATYLLGHVSMLNAHV-MTPDGKRIITADRDEHIRISRYPKAYVIDKYLFGHDGFVSALHIPPSNPSLLLSAGGDSSLLIWNPSTG 225

[Close]

BLAST of NO16G01170 vs. NCBI_GenBank
Match: XP_774258.1 (hypothetical protein CNBG2390 [Cryptococcus neoformans var. neoformans B-3501A] >P0CS53.1 RecName: Full=tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; AltName: Full=Transfer RNA methyltransferase 82 >EAL19611.1 hypothetical protein CNBG2390 [Cryptococcus neoformans var. neoformans B-3501A])

HSP 1 Score: 87.8 bits (216), Expect = 9.600e-14
Identity = 70/224 (31.25%), Postives = 107/224 (47.77%), Query Frame = 0

Query:   31 SQSSSKIIALPA--PSQPAGKADASAPPITALGQVEAVALTADGNKAAALYRHKVLALWDIRDSTAPALLAHRLLPKKAFSLLFAQLEVPGNVQKEDTILVNDKVGDVRAY------------------FATTELLSKSSAFLLGHTASVGTCLDLSPDGTCLASGDRDEKVRLSKFPCTLMIDAYLTGHDNFISSVTF-IRRGTAVLTGSGDGTLALWDAQTG 234
            S +S  I A PA     P+    AS P     G +  +A+  DG  AA L   K LA+WDI+    P L   R + KK   L FA         K+ +I++ DKVGDV +Y                         +  + +LLGH + +   + ++PDG  + + DRDE +R+S++P   +ID YL GHD F+S++       + +L+  GD +L +W+  TG
Sbjct:   13 SSTSLFIAAGPALHVFNPSTSTFASCPADGTGGLIRLLAVREDGEVAATLGEDKQLAVWDIQHD-RPQLRHTRTVVKKGSCLSFA---------KDGSIILTDKVGDVYSYPLDPVPIDPSAERPPMYTLVADPSQNPDATYLLGHVSMLNAHV-MTPDGRRIITADRDEHIRVSRYPKAYVIDKYLFGHDGFVSALHIPPSNPSLLLSAGGDPSLLIWNPSTG 225

[Close]

BLAST of NO16G01170 vs. NCBI_GenBank
Match: XP_001633080.1 (predicted protein [Nematostella vectensis] >EDO41017.1 predicted protein, partial [Nematostella vectensis])

HSP 1 Score: 87.8 bits (216), Expect = 9.600e-14
Identity = 55/176 (31.25%), Postives = 91/176 (51.70%), Query Frame = 0

Query:   59 ALGQVEAVALTADGNKAAALYRHKVLALWDIRDSTAP-ALLAHRLLPKKAFSLLFAQLEVPGNVQKEDTILVNDKVGDVRAYFATTELLSKSSAFLLGHTASVGTCLDLSPDGTCLASGDRDEKVRLSKFPCTLMIDAYLTGHDNFISSVTFIRRGTAVLTGSGDGTLALWDAQTG 234
            ALG     A +  GN  A     K L +W    +T+P   ++ R L K+A ++ F         QKEDT+++ DK GDV  Y A   +   S   LLGH + +   + ++ D   + + DRDEK+R+S +P +  I+A+   H +F+S +  + +   + +G GDG++  WD + G
Sbjct:    2 ALGHGVVGAFSPSGNLFAICTNRKTLVVW----NTSPWEYVSKRKLTKRATAISF--------TQKEDTVIIADKAGDVYQYSAKDSVAKPS--LLLGHLSMIMDMV-VTDDNKFIITADRDEKIRVSHYPNSYNIEAFCLQHQDFVSKICLLNKSGVLASGGGDGSIHFWDFRIG 162

[Close]

BLAST of NO16G01170 vs. NCBI_GenBank
Match: XP_003195233.1 (tRNA (guanine-N7-)-methyltransferase, putative [Cryptococcus gattii WM276] >ADV23446.1 tRNA (guanine-N7-)-methyltransferase, putative [Cryptococcus gattii WM276] >KIR77554.1 tRNA (guanine-N(7)-)-methyltransferase subunit TRM82 [Cryptococcus gattii EJB2] >KIY35860.1 tRNA (guanine-N(7)-)-methyltransferase subunit TRM82 [Cryptococcus gattii E566])

HSP 1 Score: 87.0 bits (214), Expect = 1.600e-13
Identity = 63/207 (30.43%), Postives = 99/207 (47.83%), Query Frame = 0

Query:   46 PAGKADASAPPITALGQVEAVALTADGNKAAALYRHKVLALWDIRDSTAPALLAHRLLPKKAFSLLFAQLEVPGNVQKEDTILVNDKVGDVRAY------------------FATTELLSKSSAFLLGHTASVGTCLDLSPDGTCLASGDRDEKVRLSKFPCTLMIDAYLTGHDNFISSVTF-IRRGTAVLTGSGDGTLALWDAQTG 234
            P+    AS+P     G +  +A+  DG  AA L   K LA+WDI+      L   R + KK   L F+         K+  I++ DKVGDV AY                         +  + +LLGH + +   + ++PDG  + + DRDE +R+S++P   +ID YL GHD F+S++       + +L+  GD +L +W+  TG
Sbjct:   30 PSTSTFASSPADGKAGLIRLLAVREDGEVAATLGEDKQLAVWDIQHDKL-QLRHTRTVVKKGSCLSFS---------KDGFIILTDKVGDVYAYPLDPVPVDPSAERPPMYTLVADPSQNPDATYLLGHVSMLNAHV-MTPDGKRIITADRDEHIRISRYPKAYVIDKYLFGHDGFVSALHIPPSNPSLLLSAGGDSSLLIWNPSTG 225

[Close]

BLAST of NO16G01170 vs. NCBI_GenBank
Match: KGB76423.1 (tRNA (guanine-N(7)-)-methyltransferase subunit TRM82 [Cryptococcus gattii VGII R265] >KIR41924.1 tRNA (guanine-N(7)-)-methyltransferase subunit TRM82 [Cryptococcus gattii VGII Ram5] >KIR73251.1 tRNA (guanine-N(7)-)-methyltransferase subunit TRM82 [Cryptococcus gattii VGII CA1014] >KIY59962.1 tRNA (guanine-N(7)-)-methyltransferase subunit TRM82 [Cryptococcus gattii VGII 99/473])

HSP 1 Score: 87.0 bits (214), Expect = 1.600e-13
Identity = 62/201 (30.85%), Postives = 98/201 (48.76%), Query Frame = 0

Query:   52 ASAPPITALGQVEAVALTADGNKAAALYRHKVLALWDIRDSTAPALLAHRLLPKKAFSLLFAQLEVPGNVQKEDTILVNDKVGDVRAY------------------FATTELLSKSSAFLLGHTASVGTCLDLSPDGTCLASGDRDEKVRLSKFPCTLMIDAYLTGHDNFISSVTF-IRRGTAVLTGSGDGTLALWDAQTG 234
            AS+P     G +  +A+  DG  AA L   K LA+WDI+      L   R + KK   L F+         K+ +I++ DKVGDV AY                         +  + +LLGH + +   + ++PDG  + + DRDE +R+S++P   +ID YL GHD F+S++       + +L+  GD +L +W+  TG
Sbjct:   36 ASSPADGKGGLIRLLAVREDGEVAATLGEDKQLAVWDIQHDKL-QLRHTRTVVKKGSCLSFS---------KDGSIILTDKVGDVYAYPLDPVPVDPSAERPPMYTLVADPSQNPDATYLLGHVSMLNAHV-MTPDGKRIITADRDEHIRISRYPKAYVIDKYLFGHDGFVSALHIPPSNPSLLLSAGGDSSLLIWNPSTG 225

[Close]

BLAST of NO16G01170 vs. NCBI_GenBank
Match: KIR27582.1 (tRNA (guanine-N(7)-)-methyltransferase subunit TRM82 [Cryptococcus gattii VGII LA55] >KIR91586.1 tRNA (guanine-N(7)-)-methyltransferase subunit TRM82 [Cryptococcus gattii VGII CBS 10090])

HSP 1 Score: 87.0 bits (214), Expect = 1.600e-13
Identity = 62/201 (30.85%), Postives = 98/201 (48.76%), Query Frame = 0

Query:   52 ASAPPITALGQVEAVALTADGNKAAALYRHKVLALWDIRDSTAPALLAHRLLPKKAFSLLFAQLEVPGNVQKEDTILVNDKVGDVRAY------------------FATTELLSKSSAFLLGHTASVGTCLDLSPDGTCLASGDRDEKVRLSKFPCTLMIDAYLTGHDNFISSVTF-IRRGTAVLTGSGDGTLALWDAQTG 234
            AS+P     G +  +A+  DG  AA L   K LA+WDI+      L   R + KK   L F+         K+ +I++ DKVGDV AY                         +  + +LLGH + +   + ++PDG  + + DRDE +R+S++P   +ID YL GHD F+S++       + +L+  GD +L +W+  TG
Sbjct:   36 ASSPADGKGGLIRLLAVREDGEVAATLGEDKQLAVWDIQHDKL-QLRHTRTVVKKGSCLSFS---------KDGSIILTDKVGDVYAYPLDPVPVDPSAERPPMYTLVADPSQNPDATYLLGHVSMLNAHV-MTPDGKRIITADRDEHIRISRYPKAYVIDKYLFGHDGFVSALHIPPSNPSLLLSAGGDSSLLIWNPSTG 225

[Close]

BLAST of NO16G01170 vs. NCBI_GenBank
Match: KIR99007.1 (tRNA (guanine-N(7)-)-methyltransferase subunit TRM82 [Cryptococcus gattii VGII 2001/935-1])

HSP 1 Score: 87.0 bits (214), Expect = 1.600e-13
Identity = 62/201 (30.85%), Postives = 98/201 (48.76%), Query Frame = 0

Query:   52 ASAPPITALGQVEAVALTADGNKAAALYRHKVLALWDIRDSTAPALLAHRLLPKKAFSLLFAQLEVPGNVQKEDTILVNDKVGDVRAY------------------FATTELLSKSSAFLLGHTASVGTCLDLSPDGTCLASGDRDEKVRLSKFPCTLMIDAYLTGHDNFISSVTF-IRRGTAVLTGSGDGTLALWDAQTG 234
            AS+P     G +  +A+  DG  AA L   K LA+WDI+      L   R + KK   L F+         K+ +I++ DKVGDV AY                         +  + +LLGH + +   + ++PDG  + + DRDE +R+S++P   +ID YL GHD F+S++       + +L+  GD +L +W+  TG
Sbjct:   36 ASSPADGKGGLIRLLAVREDGEVAATLGEDKQLAVWDIQHDKL-QLRHTRTVVKKGSCLSFS---------KDGSIILTDKVGDVYAYPLDPVPVDPSAERPPMYTLVADPSQNPDATYLLGHVSMLNAHV-MTPDGKRIITADRDEHIRISRYPKAYVIDKYLFGHDGFVSALHIPPSNPSLLLSAGGDSSLLIWNPSTG 225

[Close]

BLAST of NO16G01170 vs. NCBI_GenBank
Match: KJE01150.1 (tRNA (guanine-N(7)-)-methyltransferase subunit TRM82 [Cryptococcus gattii NT-10])

HSP 1 Score: 87.0 bits (214), Expect = 1.600e-13
Identity = 63/207 (30.43%), Postives = 99/207 (47.83%), Query Frame = 0

Query:   46 PAGKADASAPPITALGQVEAVALTADGNKAAALYRHKVLALWDIRDSTAPALLAHRLLPKKAFSLLFAQLEVPGNVQKEDTILVNDKVGDVRAY------------------FATTELLSKSSAFLLGHTASVGTCLDLSPDGTCLASGDRDEKVRLSKFPCTLMIDAYLTGHDNFISSVTF-IRRGTAVLTGSGDGTLALWDAQTG 234
            P+    AS+P     G +  +A+  DG  AA L   K LA+WDI+      L   R + KK   L F+         K+  I++ DKVGDV AY                         +  + +LLGH + +   + ++PDG  + + DRDE +R+S++P   +ID YL GHD F+S++       + +L+  GD +L +W+  TG
Sbjct:   30 PSTSTFASSPADGKAGLIRLLAVREDGEVAATLGEDKQLAVWDIQHDKL-QLRHTRTVVKKGSCLSFS---------KDGFIILTDKVGDVYAYPLDPVPVDPSAERPPMYTLVADPSQNPDATYLLGHVSMLNAHV-MTPDGKRIITADRDEHIRISRYPKAYVIDKYLFGHDGFVSALHIPPSNPSLLLSAGGDSSLLIWNPSTG 225

The following BLAST results are available for this feature:

BLAST of NO16G01170 vs. NCBI_GenBank

BLAST of NO16G01170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM23997.1	3.400e-120	57.04	trna (guanine-n7-)-methyltransferase [Nannochlorop...	[more]
CBN79278.1	1.000e-15	35.29	tRNA (guanine-n(7)-)-methyltransferase complex sub...	[more]
KIR68090.1	7.300e-14	30.43	tRNA (guanine-N(7)-)-methyltransferase subunit TRM...	[more]
XP_774258.1	9.600e-14	31.25	hypothetical protein CNBG2390 [Cryptococcus neofor...	[more]
XP_001633080.1	9.600e-14	31.25	predicted protein [Nematostella vectensis] >EDO410...	[more]
XP_003195233.1	1.600e-13	30.43	tRNA (guanine-N7-)-methyltransferase, putative [Cr...	[more]
KGB76423.1	1.600e-13	30.85	tRNA (guanine-N(7)-)-methyltransferase subunit TRM...	[more]
KIR27582.1	1.600e-13	30.85	tRNA (guanine-N(7)-)-methyltransferase subunit TRM...	[more]
KIR99007.1	1.600e-13	30.85	tRNA (guanine-N(7)-)-methyltransferase subunit TRM...	[more]
KJE01150.1	1.600e-13	30.43	tRNA (guanine-N(7)-)-methyltransferase subunit TRM...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL150	nonsL150	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR018	ncniR018	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR031	ngnoR031	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK003104	NSK003104	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO16G01170.1	NO16G01170.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|631239	gene_5998	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100040g33	gene6460	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO16G01170.1	NO16G01170.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO16G01170 ID=NO16G01170|Name=NO16G01170|organism=Nannochloropsis oceanica|type=gene|length=1681bp
CACAACACGACATTCGCAGTCAGTCAGCGAACGCGAGCGATAATCATAGG
GCTCGTCCGCTAGCCATTGCTACGGCCTCTTGCAAAAACATCAAACACAT
ATTATGCATGTAATCTCTCTCTCCCTTTTTCTTCATCTTTGTCCACGATG
CGAATTAGGAAAAAAAGCCAACTTGATCGGCGCGCTCGCGCCCCTTCGCG
GAATAACCTCCCATTAATCTTATCCACCGCCCACAAAACCTACAATCCGA
ACCCATAGCAGCCCACACCACTGCACCAACTTAGCCATGCGTGACAAGCT
CTTAGTTTCGAGCAGTAGCAGCGGCAAGCTTCTTTGTGCCTACGCAGGGG
AGCAAGTTTACCTCATCGACACAGCCAGCCAGAGCAGCAGCAAAATCATA
GCCTTGCCTGCCCCTAGCCAACCCGCCGGCAAAGCCGATGCTTCCGCGCC
GCCTATCACGGCATTGGGGCAAGTGGAGGCCGTGGCCCTGACTGCCGATG
GTAACAAAGCGGCGGCGCTGTATCGGCACAAGGTCCTGGCCTTGTGGGAC
ATCCGCGACAGCACCGCTCCCGCCCTCCTTGCCCATCGTCTCTTGCCCAA
AAAGGCATTTTCCCTTCTCTTTGCTCAACTAGAAGTACCAGGTAACGTGC
AAAAAGAAGACACCATCCTTGTCAATGACAAGGTGGGGGATGTGCGTGCC
TATTTTGCCACTACCGAGCTGCTGTCCAAATCGTCAGCGTTTTTGCTGGG
CCACACTGCCTCTGTTGGAACCTGCCTCGACCTCTCTCCTGATGGCACAT
GTCTCGCGTCGGGGGACCGAGACGAAAAAGTTCGTCTTTCGAAGTTTCCT
TGTACGTTGATGATTGATGCGTATTTGACAGGGCATGATAACTTTATAAG
CTCCGTGACATTCATTCGGAGGGGTACGGCGGTGCTGACGGGGAGTGGGG
ACGGAACCCTTGCCTTGTGGGATGCCCAAACAGGGGCTGAGAAAGTAAAG
CGTGTCCTTCCCTTCACCTTAAAAGTGAAAAATGAGACCCAAAGGGAGGA
GGAGGGGAAGGAGGAGGGAAGTAACGAGCCTAGCAAGACGAGGAACAAGG
CAACGACCGTACCATGCGCCGTGGCCATTAATCGCGAGGAAAGTCTCGCA
ATTGTCACTCTCTTGGGATCGGCTGAGTTGCTCGTTTATTCGTTACCGGC
TCTAGAGCTGGTGCAGACTTTGAAATTACCCTCCCCACCGTTGGGGGCTG
TGTGGTTGGAGAAGGGAGGGCAGGAGGGCGGGAAGGAGGAAGTGCTGTAT
GTCACGGTGGGCGCACCGGAGTATTTGATGGCTTACGTTCTTATAGGAAA
TGAGCTACAGGCACAAATAGAGGAACACTCAGTGGTTGTAGCGGTGAGAT
CGTTCGGAATGAAAGCGGGCTTAGAGAGTGAATTGACGGTCGATGAAGGC
GACGAGGGATTCTTAGGGGGGATGACCAAGGAAAATTTGGAGGTGAGGTT
TGAGTGGAACAGCCGCCAAAGAAAGGAGGAGCACGTGGAGAAGGCGCGAC
AGAAGCGACAGGAGAAGAGACACAGGGAGAGAGATGAGAGGATTGCGGGG
ATGGGGGACGGAGGGAAGAAGGGGAAGCGGGGGGGAGGAGAGGGAGGGGG
GGAGGCCAGCGCGATATCGAAGGAGGGGTAA

protein sequence of NO16G01170.1

>NO16G01170.1-protein ID=NO16G01170.1-protein|Name=NO16G01170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=465bp
MRDKLLVSSSSSGKLLCAYAGEQVYLIDTASQSSSKIIALPAPSQPAGKA
DASAPPITALGQVEAVALTADGNKAAALYRHKVLALWDIRDSTAPALLAH
RLLPKKAFSLLFAQLEVPGNVQKEDTILVNDKVGDVRAYFATTELLSKSS
AFLLGHTASVGTCLDLSPDGTCLASGDRDEKVRLSKFPCTLMIDAYLTGH
DNFISSVTFIRRGTAVLTGSGDGTLALWDAQTGAEKVKRVLPFTLKVKNE
TQREEEGKEEGSNEPSKTRNKATTVPCAVAINREESLAIVTLLGSAELLV
YSLPALELVQTLKLPSPPLGAVWLEKGGQEGGKEEVLYVTVGAPEYLMAY
VLIGNELQAQIEEHSVVVAVRSFGMKAGLESELTVDEGDEGFLGGMTKEN
LEVRFEWNSRQRKEEHVEKARQKRQEKRHRERDERIAGMGDGGKKGKRGG
GEGGGEASAISKEG*

Synonyms

Publications